MD12G1172900.v1.1

receptor-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
25325880 .. 25327351
1472 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1172900.v1.1.491

Sequence Viewer

Length: 1449 bp
ATGCAGGTTACAGACTTGCAGATATGGGATTTGGGAGGGAGAAGACTTCAAAGTCAAGCCACACGTTTACCATGCCTATTAAAGTTGCCACAACCATTCTCAGTTTCTCACAACTTAATTTCCCTAAGCTTCTCTCTAAACCTCAAAATATTAAGTTTATCCAAGATGAAACCTCTCTTCCCACTCCCATATTTCTTCCTCCTGTTCTTCATCATCATTAATACTTTCTGTGTTAACATTGCGGCTGCAGTCCATGGTCGGTGTTTCGAAGACCAGCAATTGCTCCATCTGAAGAAAAGCCTCACCTTTGCTCCCGAGTCATCTGAGCATCCTGCTTCAACCAAGTTTATATCATGGAATTCAAGTACCGACTGCTGTTCTTGGGCTGATGTTACTTGCAATGCCAACGGCAGCGTTGTTGGTCTTGACATTAGTAGCAAAAACATCTCCGGTGGCATTGACAACTCGAGCACTCTCTTCCATCTTCAACATCTTCAAAGCCTCAACTTGGCTGATAACTCTTTTGTTAACGGCTCACGCATTCCATCATCAATCGGAAAGCTTACCAACTTGAGGTATCTAAACTTATCTGATTCTGGTTATTCCGGAAAGATTCCCATTGAGATTTCACGCTTGACAAGGTTGGTTGTCCTAGATATTTCTCTATGTAAACATCAGTGTGCCACCAAACTTGAGAGCCCGACTTTGAGCATGCTCTTTCAGAACCTCACAGAGATTACAGAGCTATATCTTGATGGGATAAATATATCAGCACAGGGGAGTCAGTGGTGCCAAGCAATATCATCTTCACTCCCAAATCTGAGGGTGTTGAGCATGTGTGGAAGCCAGCTCTCAAGTCCTTTTTGTCAGTCCCTCGCAAAACTTCAGTCTCTCTCAGTGATTCAATTGGATAGTAATGACATCTACGGTCCAATTCCAGGATTCTTTCCCAAGTTGACTTCTTTGAGTCTTTGTAATTGCATTCTGAATGGAACATTTCCCAAAGAGATCTTTCAGGTACCTACTTTACAAGCTATTGACCTTTCCGGTAACATACATCTTCATGGTTCTTTTCCAGAATTTCTTGAGAATACATCTCTTGGATTTTTGGACCTAAGCCACACAAAGTTTTCAGGGTTATTGCCTGACTCCATCGGCAACCTCAAATTGTTGTCCATTTTAAATCTTTATAACTGCAGTTTTAGTGGATCAATCCCTAAGTCCATGGCAAGCCTAACAAAATTGTTTTACTTGGACATGTCGTCAAATATGTTTAATGGTTCGATTGATTCTATTTACTGGAAAAAGCTTGTAAATCTCGAATATTTAGCTTTGGATTCAAATTTCCTCACAGGTAGTATTCCGTCATCTCTGTTTTCAGATAAGGAACATCCTCAATGTCTGGACAAGTGCAATAAACACTCATTACAAGATTGCCAGGTGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

483

Amino Acids

53.15

Weight (kDa)

6.84

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 92 - 134 1.6e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 320 - 444 5.3e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AasI GACNNNNNNGTC 1 cut(s) 51
Acc65I GGTACC 1 cut(s) 1018
AccB1I GGYRCC 3 cut(s) 789, 1018, 1441
AccIII TCCGGA 1 cut(s) 605
AciI CCGC 1 cut(s) 242
AclWI GGATC 1 cut(s) 1216
AcsI RAATTY 3 cut(s) 358, 1079, 1342
AcuI CTGAAG 2 cut(s) 311, 869
AfaI GTAC 2 cut(s) 367, 1020
AfiI CCNNNNNNNGG 3 cut(s) 508, 573, 938
AflIII ACRYGT 2 cut(s) 62, 1257
AgsI TTSAA 7 cut(s) 50, 339, 363, 488, 497, 905, 1341
AhdI GACNNNNNGTC 1 cut(s) 1261
AjnI CCWGG 2 cut(s) 937, 1437
AluBI AGCT 7 cut(s) 129, 562, 745, 850, 1034, 1309, 1331
AluI AGCT 7 cut(s) 129, 562, 745, 850, 1034, 1309, 1331
Alw21I GWGCWC 1 cut(s) 473
Alw26I GTCTC 1 cut(s) 894
AlwI GGATC 1 cut(s) 1216
Ama87I CYCGRG 2 cut(s) 314, 466
Aor13HI TCCGGA 1 cut(s) 605
ApeKI GCWGC 2 cut(s) 245, 411
ApoI RAATTY 3 cut(s) 358, 1079, 1342
ArsI GACNNNNNNTTYG 2 cut(s) 872, 904
AseI ATTAAT 1 cut(s) 219
Asp718I GGTACC 1 cut(s) 1018
AspS9I GGNCC 2 cut(s) 929, 1111
AsuHPI GGTGA 1 cut(s) 295
AsuII TTCGAA 1 cut(s) 267
AvaI CYCGRG 2 cut(s) 314, 466
AvaII GGWCC 2 cut(s) 929, 1111
BanI GGYRCC 3 cut(s) 789, 1018, 1441
BanII GRGCYC 1 cut(s) 701
BbsI GAAGAC 2 cut(s) 49, 276
Bbv12I GWGCWC 1 cut(s) 473
BbvI GCAGC 2 cut(s) 232, 423
BccI CCATC 5 cut(s) 294, 489, 553, 749, 1160
BceAI ACGGC 2 cut(s) 424, 547
BciT130I CCWGG 2 cut(s) 939, 1439
BcoDI GTCTC 1 cut(s) 894
BfaI CTAG 1 cut(s) 653
BfmI CTRYAG 2 cut(s) 246, 1195
BglII AGATCT 1 cut(s) 1008
BisI GCNGC 3 cut(s) 243, 246, 412
BlsI GCNGC 3 cut(s) 244, 247, 413
Bme1390I CCNGG 2 cut(s) 939, 1439
Bme18I GGWCC 2 cut(s) 929, 1111
BmeRI GACNNNNNGTC 1 cut(s) 1261
BmeT110I CYCGRG 2 cut(s) 314, 466
BmgT120I GGNCC 2 cut(s) 929, 1111
BmiI GGNNCC 3 cut(s) 791, 1020, 1443
BmrFI CCNGG 2 cut(s) 939, 1439
BmsI GCATC 1 cut(s) 337
BpiI GAAGAC 2 cut(s) 49, 276
Bpu10I CCTNAGC 2 cut(s) 125, 1115
Bpu14I TTCGAA 1 cut(s) 267
BpuEI CTTGAG 4 cut(s) 592, 713, 838, 1106
BsaJI CCNNGG 2 cut(s) 253, 1224
BsaWI WCCGGW 3 cut(s) 449, 605, 1046
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bsc4I CCNNNNNNNGG 3 cut(s) 508, 573, 938
Bse1I ACTGG 1 cut(s) 1304
Bse3DI GCAATG 2 cut(s) 237, 406
BseAI TCCGGA 1 cut(s) 605
BseBI CCWGG 2 cut(s) 939, 1439
BseDI CCNNGG 2 cut(s) 253, 1224
BseGI GGATG 2 cut(s) 328, 1390
BseLI CCNNNNNNNGG 3 cut(s) 508, 573, 938
BseMI GCAATG 2 cut(s) 237, 406
BseMII CTCAG 4 cut(s) 114, 315, 812, 909
BseNI ACTGG 1 cut(s) 1304
BseXI GCAGC 2 cut(s) 232, 423
BshNI GGYRCC 3 cut(s) 789, 1018, 1441
BsiHKAI GWGCWC 1 cut(s) 473
BsiHKCI CYCGRG 2 cut(s) 314, 466
BsiSI CCGG 3 cut(s) 450, 606, 1047
BslFI GGGAC 1 cut(s) 856
BslI CCNNNNNNNGG 3 cut(s) 508, 573, 938
BsmAI GTCTC 1 cut(s) 894
BsmFI GGGAC 1 cut(s) 856
BsmI GAATGC 2 cut(s) 540, 981
BsoBI CYCGRG 2 cut(s) 314, 466
Bsp119I TTCGAA 1 cut(s) 267
Bsp1286I GDGCHC 2 cut(s) 473, 701
Bsp13I TCCGGA 1 cut(s) 605
Bsp143I GATC 2 cut(s) 1008, 1208
Bsp19I CCATGG 2 cut(s) 253, 1224
BspACI CCGC 1 cut(s) 242
BspCNI CTCAG 4 cut(s) 113, 316, 813, 908
BspEI TCCGGA 1 cut(s) 605
BspLI GGNNCC 3 cut(s) 791, 1020, 1443
BspMAI CTGCAG 2 cut(s) 250, 1199
BspPI GGATC 1 cut(s) 1216
BspT104I TTCGAA 1 cut(s) 267
BspT107I GGYRCC 3 cut(s) 789, 1018, 1441
BsrDI GCAATG 2 cut(s) 237, 406
BsrI ACTGG 1 cut(s) 1304
BssECI CCNNGG 2 cut(s) 253, 1224
BssMI GATC 2 cut(s) 1008, 1208
BssT1I CCWWGG 2 cut(s) 253, 1224
Bst2UI CCWGG 2 cut(s) 939, 1439
Bst4CI ACNGT 1 cut(s) 929
Bst6I CTCTTC 2 cut(s) 182, 482
BstBI TTCGAA 1 cut(s) 267
BstC8I GCNNGC 3 cut(s) 713, 848, 1231
BstDEI CTNAG 7 cut(s) 100, 125, 324, 821, 895, 1115, 1218
BstDSI CCRYGG 2 cut(s) 253, 1224
BstF5I GGATG 2 cut(s) 328, 1390
BstKTI GATC 2 cut(s) 1011, 1211
BstMAI GTCTC 1 cut(s) 894
BstMBI GATC 2 cut(s) 1008, 1208
BstNI CCWGG 2 cut(s) 939, 1439
BstNSI RCATGY 3 cut(s) 715, 838, 1261
BstSCI CCNGG 2 cut(s) 937, 1437
BstSFI CTRYAG 2 cut(s) 246, 1195
BstV1I GCAGC 2 cut(s) 232, 423
BstV2I GAAGAC 2 cut(s) 49, 276
BstX2I RGATCY 1 cut(s) 1008
BstYI RGATCY 1 cut(s) 1008
BtgI CCRYGG 2 cut(s) 253, 1224
BtsCI GGATG 2 cut(s) 328, 1390
BtsIMutI CAGTG 3 cut(s) 683, 791, 903
Cac8I GCNNGC 3 cut(s) 713, 848, 1231
Cfr13I GGNCC 2 cut(s) 929, 1111
Csp6I GTAC 2 cut(s) 366, 1019
CspCI CAANNNNNGTGG 2 cut(s) 673, 708
CviAII CATG 8 cut(s) 72, 254, 354, 712, 835, 1064, 1225, 1258
CviQI GTAC 2 cut(s) 366, 1019
DdeI CTNAG 7 cut(s) 100, 125, 324, 821, 895, 1115, 1218
DpnI GATC 2 cut(s) 1010, 1210
DpnII GATC 2 cut(s) 1008, 1208
DraI TTTAAA 1 cut(s) 1182
DrdI GACNNNNNNGTC 1 cut(s) 51
DriI GACNNNNNGTC 1 cut(s) 1261
DseDI GACNNNNNNGTC 1 cut(s) 51
Eam1104I CTCTTC 2 cut(s) 182, 482
Eam1105I GACNNNNNGTC 1 cut(s) 1261
EarI CTCTTC 2 cut(s) 182, 482
Eco130I CCWWGG 2 cut(s) 253, 1224
Eco24I GRGCYC 1 cut(s) 701
Eco47I GGWCC 2 cut(s) 929, 1111
Eco57I CTGAAG 2 cut(s) 311, 869
Eco88I CYCGRG 2 cut(s) 314, 466
EcoRI GAATTC 1 cut(s) 358
EcoRII CCWGG 2 cut(s) 937, 1437
EcoT14I CCWWGG 2 cut(s) 253, 1224
EcoT38I GRGCYC 1 cut(s) 701
ErhI CCWWGG 2 cut(s) 253, 1224
FaeI CATG 8 cut(s) 75, 257, 357, 715, 838, 1067, 1228, 1261
FaqI GGGAC 1 cut(s) 856
FatI CATG 8 cut(s) 71, 253, 353, 711, 834, 1063, 1224, 1257
Fnu4HI GCNGC 3 cut(s) 243, 246, 412
FokI GGATG 2 cut(s) 315, 1377
FriOI GRGCYC 1 cut(s) 701
Fsp4HI GCNGC 3 cut(s) 243, 246, 412
FspBI CTAG 1 cut(s) 653
GluI GCNGC 3 cut(s) 243, 246, 412
HapII CCGG 3 cut(s) 450, 606, 1047
Hin1II CATG 8 cut(s) 75, 257, 357, 715, 838, 1067, 1228, 1261
HincII GTYRAC 3 cut(s) 235, 529, 957
HindII GTYRAC 3 cut(s) 235, 529, 957
HindIII AAGCTT 3 cut(s) 127, 560, 1307
HpaI GTTAAC 2 cut(s) 235, 529
HpaII CCGG 3 cut(s) 450, 606, 1047
HphI GGTGA 1 cut(s) 295
Hpy166II GTNNAC 5 cut(s) 68, 235, 529, 671, 957
Hpy188I TCNGA 8 cut(s) 291, 325, 557, 592, 723, 822, 987, 1381
Hpy188III TCNNGA 8 cut(s) 314, 425, 606, 752, 1076, 1085, 1319, 1403
Hpy8I GTNNAC 5 cut(s) 68, 235, 529, 671, 957
HpyCH4III ACNGT 1 cut(s) 929
HpyCH4IV ACGT 1 cut(s) 64
HpyCH4V TGCA 7 cut(s) 4, 19, 248, 399, 981, 1197, 1413
HpyF3I CTNAG 7 cut(s) 100, 125, 324, 821, 895, 1115, 1218
HpySE526I ACGT 1 cut(s) 64
Hsp92II CATG 8 cut(s) 75, 257, 357, 715, 838, 1067, 1228, 1261
Kpn2I TCCGGA 1 cut(s) 605
KpnI GGTACC 1 cut(s) 1022
KspAI GTTAAC 2 cut(s) 235, 529
Kzo9I GATC 2 cut(s) 1008, 1208
LmnI GCTCC 2 cut(s) 288, 316
Lsp1109I GCAGC 2 cut(s) 232, 423
LweI GCATC 1 cut(s) 337
MaeI CTAG 1 cut(s) 653
MaeII ACGT 1 cut(s) 64
MaeIII GTNAC 3 cut(s) 7, 391, 1049
MalI GATC 2 cut(s) 1010, 1210
MboI GATC 2 cut(s) 1008, 1208
MfeI CAATTG 2 cut(s) 278, 905
MflI RGATCY 1 cut(s) 1008
MhlI GDGCHC 2 cut(s) 473, 701
MlyI GAGTC 4 cut(s) 326, 790, 976, 1142
MroI TCCGGA 1 cut(s) 605
MseI TTAA 9 cut(s) 80, 116, 152, 219, 234, 528, 1181, 1275, 1447
MslI CAYNNNNRTG 2 cut(s) 678, 1062
MspI CCGG 3 cut(s) 450, 606, 1047
MspR9I CCNGG 2 cut(s) 939, 1439
MunI CAATTG 2 cut(s) 278, 905
Mva1269I GAATGC 2 cut(s) 540, 981
MvaI CCWGG 2 cut(s) 939, 1439
NcoI CCATGG 2 cut(s) 253, 1224
NdeII GATC 2 cut(s) 1008, 1208
NlaIII CATG 8 cut(s) 75, 257, 357, 715, 838, 1067, 1228, 1261
NlaIV GGNNCC 3 cut(s) 791, 1020, 1443
NspI RCATGY 3 cut(s) 715, 838, 1261
NspV TTCGAA 1 cut(s) 267
PaeI GCATGC 1 cut(s) 715
PaeR7I CTCGAG 1 cut(s) 466
PciI ACATGT 1 cut(s) 1257
PctI GAATGC 2 cut(s) 540, 981
PfeI GAWTC 6 cut(s) 593, 613, 901, 942, 1289, 1337
PfoI TCCNGGA 1 cut(s) 937
PkrI GCNGC 3 cut(s) 244, 247, 413
PleI GAGTC 4 cut(s) 325, 789, 975, 1142
PpsI GAGTC 4 cut(s) 325, 789, 975, 1142
PscI ACATGT 1 cut(s) 1257
PshBI ATTAAT 1 cut(s) 219
PsiI TTATAA 1 cut(s) 1191
Psp6I CCWGG 2 cut(s) 937, 1437
PspGI CCWGG 2 cut(s) 937, 1437
PspN4I GGNNCC 3 cut(s) 791, 1020, 1443
PspPI GGNCC 2 cut(s) 929, 1111
PspXI VCTCGAGB 1 cut(s) 466
PstI CTGCAG 2 cut(s) 250, 1199
PsuI RGATCY 1 cut(s) 1008
RsaI GTAC 2 cut(s) 367, 1020
RsaNI GTAC 2 cut(s) 366, 1019
RseI CAYNNNNRTG 2 cut(s) 678, 1062
SaqAI TTAA 9 cut(s) 80, 116, 152, 219, 234, 528, 1181, 1275, 1447
SatI GCNGC 3 cut(s) 243, 246, 412
Sau3AI GATC 2 cut(s) 1008, 1208
Sau96I GGNCC 2 cut(s) 929, 1111
SchI GAGTC 4 cut(s) 326, 790, 976, 1142
ScrFI CCNGG 2 cut(s) 939, 1439
SduI GDGCHC 2 cut(s) 473, 701
SfaNI GCATC 1 cut(s) 337
SfcI CTRYAG 2 cut(s) 246, 1195
Sfr274I CTCGAG 1 cut(s) 466
SfuI TTCGAA 1 cut(s) 267
SinI GGWCC 2 cut(s) 929, 1111
SlaI CTCGAG 1 cut(s) 466
SmiMI CAYNNNNRTG 2 cut(s) 678, 1062
SmlI CTYRAG 5 cut(s) 466, 571, 692, 853, 1085
SmoI CTYRAG 5 cut(s) 466, 571, 692, 853, 1085
SphI GCATGC 1 cut(s) 715
SsiI CCGC 1 cut(s) 242
SspI AATATT 2 cut(s) 150, 1325
SspMI CTAG 1 cut(s) 653
StyD4I CCNGG 2 cut(s) 937, 1437
StyI CCWWGG 2 cut(s) 253, 1224
TaaI ACNGT 1 cut(s) 929
TaiI ACGT 1 cut(s) 67
TaqI TCGA 4 cut(s) 267, 467, 1283, 1320
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 6 cut(s) 593, 613, 901, 942, 1289, 1337
Tru1I TTAA 9 cut(s) 80, 116, 152, 219, 234, 528, 1181, 1275, 1447
Tru9I TTAA 9 cut(s) 80, 116, 152, 219, 234, 528, 1181, 1275, 1447
TscAI CASTG 3 cut(s) 683, 791, 903
TseI GCWGC 2 cut(s) 245, 411
TspDTI ATGAA 3 cut(s) 182, 199, 1052
TspGWI ACGGA 1 cut(s) 1353
TspRI CASTG 3 cut(s) 683, 791, 903
VpaK11BI GGWCC 2 cut(s) 929, 1111
VspI ATTAAT 1 cut(s) 219
XapI RAATTY 3 cut(s) 358, 1079, 1342
XceI RCATGY 3 cut(s) 715, 838, 1261
XhoI CTCGAG 1 cut(s) 466
XspI CTAG 1 cut(s) 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.