Rmu_sc0001218.1_g000002

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001218.1
OG0000047
Physical Location & Seq
Forward (+)
9977 .. 13543
3567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001218.1_g000002.1.cds

Sequence Viewer

Length: 3567 bp
atgccaactctgttcctccatttcttcctcttcttaatcactaccactgttactaacctcatccccgcagttcacagcaactgtattgaagcccagaaacaatcattgctccatttcaaacaaagtcttgaatttgattcttccaagtcctccaagcttatcacatggaattcgagtaccgaatgctgttcttggctcggtgtaacttgcagcactaatgggagtgttgttggtcttgacatcagcagcgagtctatctcatgcagcattgacaattcaagcagtctctttcaacttcaacatcttcagagcctcaatttggccgataacaacttcaaaagctcttctattccatctgcaattggaaagcttacagagttgaggtatctgaatttacgtgatgcttatttttctggggttattcccattgagatttcacgcttaacaaggctgataactcttgatctctctggaaatggctaccactggttagaagttgagaacccgaatttaagcatgctatttcagaacctcacagagcttacaaatttatatcttgatcttgtaaagatatcaggacaggggaatgactggtgcgaagccatatcatcttcactgccaaatctgagggtgttgagcatgtcttgttgtggtctttcaggccctatttgtgagtcccttgcaaagcttcaatctctgtatgagattgacttgtcatctaactccttctatgctccggttccaagagtctttgccaatttttcaaacttgacttacttgattctttatagttctaatttgctcggaacatttcctaaagagatatttcagataccttccctacaaaccattgacctttccgaaaatgttgaacttgatggttcttttccagaatttccaaacaatgggtctcttcgatccttaagtgtatttgggacaaggttttcaggtgacctacccaactctattggaaatcttaagatgttgtcaagtgtatatctttcagagtgcaatttcacaggatcagttcccaagtcgattgaaaaactcacactattggctgacctggacatgtccgggaacagatttaatagtcccattagttctattcactgggaaacccttattaatttggaaatcctcgctttgagcgacaatcaactctatgggactattccttcatctgttgtttctcttcccatgctgaacatactaacactatcccacaatcagttctctggtcaagtccctgaattttccaatacctcttcgcccttacttgaaaccctttatttggaaaacaacaatttagaaggacacataccaacatctatcttcaatcttcaagggcttctttatctcaatctttcttcaaacaacttcagtggcttcccttttaatggtcctcaggtgcctagtaatctttcgtcacttgatctttcccacaatagcttgttgtttgattacaatggcaccaattcctccttccttcaaattcgctacttgtcattggcttccaacaagttgagagcattcccagatttcttgagaaatcagtccacattatacagattggacctttcaaacaaccagattcaaggcgagataccaaattggattttgagtctcaaatctcttacttccctggatctttcttgcaactccttggtaactctagaagctcctcttcctaattccacttctgctttatcttctctggaccttcattccaacaagtttcaaggcgagatacctaattggattttgagtctcaaatctcttaattcccttgatctttctggcaactccttggtgactctagaagctcctcctcctaattccacttctgctttatcttctctagaccttcattccaacaagcttcagggtatccattcctcatattccttccttcagcttcgctccctgtcattagcttctaacaagttgacaacattcccagacttcttgagaaatcaatcccatttaatcaacttggacctctcagacaaccaaattcaaggacagatacccaattggatttggagtttcaaacttcgagaactaaatctttcttgtaactccttggaaagtttagaagctcctctacttaattctacctatgttctgtcaatggttgatcttcattcaaaccagcttcagggacatttccccttgttcttcagtagtaggtatctagattattcaagaaataatttcagctctagtataccagctgacattggtgacttcatttctactaagtcttacctttctctttcaagcaataactttcacggggccattccaaaatcaatatgcaatgcaagtggtaaggttcttgatctgtccaataattccttaagtggaaacattccccaatgcttgactcaattacctcagctttcggtcattgatttgaagagaaacaacctgagtggcacaattccggataattttctcaacatttgtgagctacaaactctagacctcagtaacaatcagatacaaggcaagtttccgaaatctcttgtcaactgctcaaagttagaggttttaaacattggaaacaataacatagctgatacttttccatgctttttaatgagcttatccaccttgcgtgtccttgttttgcggtccaacaagttttatggaaacattggatgtcccaagaccagtggcacatggcatgtgcttcaaataatagatttggctcataacaatttcaatggtgatatgccaggaagaatgcctctgacatggcaggctatggcgtctaatgaggatgattctccaactgaacttggattttcttatcagccgagcaggaatattgcttttgacgacagaaaggtacaaataacaggtcctgacttttattatagagatgcaattacgactatcatcaaaggtttagagttggatgtggttaagattttaactacattcaccttgattgactactcctccaacaaattcaacggatcaatacctgaggaaatcggagagttgaaatcactatatgccctcaacttatcaggtaatgctttcaccggaaaaatcccatcatcatttggtaagatgcggcaattggagtccttagatctctcaaagaaccacttgagcggccaaattccccccgagtttgcaaagctcaatttcctttcgcacttgaatgtctcatataatcaactgacgggaaggatcccaaccaacactcagttttcgacatttccaagtacctcctttgagggtaataaaggattatgggggcctcctctgacatcggataccgcaatcgcattgccacctccaaagtttaatggaagctcaagtaatccgaattctggagatgagattgattggaatgtcatcagtgctgaaattggatttacatgtgggtttggtattgccgtcgggtcacttctgttttgtaagagatggaggaaatggtattacagagctatgtttaacattctgttcaagatattccctcagctggaacacagatttggtaatcacagaaggcatgtttacataaatcaaaggtattggagacgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1188

Amino Acids

132.02

Weight (kDa)

5.83

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1411, 1472
AccB7I CCANNNNNTGG 1 cut(s) 905
AccBSI CCGCTC 1 cut(s) 3129
AccI GTMKAC 1 cut(s) 2230
AccIII TCCGGA 1 cut(s) 2449
AciI CCGC 5 cut(s) 66, 2638, 3088, 3129, 3297
AclWI GGATC 6 cut(s) 912, 1030, 1656, 2995, 3202, 3215
AcoI YGGCCR 2 cut(s) 321, 3130
AcuI CTGAAG 6 cut(s) 290, 1366, 1868, 1898, 2144, 2167
AcyI GRCGYC 1 cut(s) 2777
AfaI GTAC 3 cut(s) 178, 2859, 3244
AfiI CCNNNNNNNGG 7 cut(s) 319, 905, 1294, 1400, 2161, 3350, 3502
AflII CTTAAG 3 cut(s) 922, 977, 2362
AflIII ACRYGT 2 cut(s) 1071, 3398
AjnI CCWGG 3 cut(s) 1065, 1644, 2743
AjuI GAANNNNNNNTTGG 4 cut(s) 1469, 1501, 3498, 3530
Alw26I GTCTC 6 cut(s) 290, 915, 1631, 1775, 3187, 3553
AlwI GGATC 6 cut(s) 912, 1030, 1656, 2995, 3202, 3215
AlwNI CAGNNNCTG 2 cut(s) 81, 2873
Ama87I CYCGRG 1 cut(s) 3143
Aor13HI TCCGGA 1 cut(s) 2449
AoxI GGCC 5 cut(s) 321, 661, 2301, 3130, 3275
ApeKI GCWGC 3 cut(s) 210, 246, 264
ArsI GACNNNNNNTTYG 4 cut(s) 893, 925, 2854, 2886
AseI ATTAAT 1 cut(s) 1128
AspS9I GGNCC 9 cut(s) 662, 1403, 1576, 1720, 1999, 2301, 2640, 2870, 3275
AsuC2I CCSGG 1 cut(s) 1078
AsuHPI GGTGA 6 cut(s) 962, 1825, 2258, 2747, 2944, 3046
AvaI CYCGRG 1 cut(s) 3143
AvaII GGWCC 6 cut(s) 1403, 1576, 1720, 1999, 2640, 2870
AxyI CCTNAGG 2 cut(s) 1407, 2997
BamHI GGATCC 1 cut(s) 3207
BanI GGYRCC 2 cut(s) 1411, 1472
BarI GAAGNNNNNNTAC 4 cut(s) 1305, 1337, 2091, 2123
BbvCI CCTCAGC 2 cut(s) 2400, 3498
BbvI GCAGC 3 cut(s) 222, 258, 276
BccI CCATC 4 cut(s) 361, 872, 3076, 3438
BceAI ACGGC 1 cut(s) 3401
BciT130I CCWGG 3 cut(s) 1067, 1646, 2745
BciVI GTATCC 2 cut(s) 1901, 3286
BcnI CCSGG 1 cut(s) 1078
BcoDI GTCTC 6 cut(s) 290, 915, 1631, 1775, 3187, 3553
BfaI CTAG 7 cut(s) 1416, 1676, 1820, 1862, 2198, 2226, 2486
BfrI CTTAAG 3 cut(s) 922, 977, 2362
BfuI GTATCC 2 cut(s) 1901, 3286
BglII AGATCT 1 cut(s) 3106
BisI GCNGC 5 cut(s) 211, 247, 265, 3089, 3130
BlsI GCNGC 5 cut(s) 212, 248, 266, 3090, 3131
Bme1390I CCNGG 4 cut(s) 1067, 1078, 1646, 2745
Bme18I GGWCC 6 cut(s) 1403, 1576, 1720, 1999, 2640, 2870
BmeT110I CYCGRG 1 cut(s) 3143
BmgT120I GGNCC 9 cut(s) 662, 1403, 1576, 1720, 1999, 2301, 2640, 2870, 3275
BmiI GGNNCC 6 cut(s) 741, 1413, 1474, 2302, 3209, 3276
BmrFI CCNGG 4 cut(s) 1067, 1078, 1646, 2745
BmrI ACTGGG 1 cut(s) 1123
BmsI GCATC 3 cut(s) 391, 2881, 3075
BmuI ACTGGG 1 cut(s) 1123
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 3372
Bpu10I CCTNAGC 2 cut(s) 2400, 3498
BpuEI CTTGAG 4 cut(s) 1567, 1990, 3145, 3319
BpuMI CCSGG 1 cut(s) 1078
BsaAI YACGTR 1 cut(s) 398
BsaHI GRCGYC 1 cut(s) 2777
BsaI GGTCTC 1 cut(s) 915
BsaJI CCNNGG 4 cut(s) 1644, 1665, 1809, 2085
BsaWI WCCGGW 3 cut(s) 736, 2449, 3056
BsaXI ACNNNNNCTCC 2 cut(s) 2954, 2984
Bsc4I CCNNNNNNNGG 7 cut(s) 319, 905, 1294, 1400, 2161, 3350, 3502
Bse1I ACTGG 4 cut(s) 491, 596, 1118, 2679
Bse21I CCTNAGG 2 cut(s) 1407, 2997
Bse3DI GCAATG 3 cut(s) 104, 2329, 3305
BseAI TCCGGA 1 cut(s) 2449
BseBI CCWGG 3 cut(s) 1067, 1646, 2745
BseDI CCNNGG 4 cut(s) 1644, 1665, 1809, 2085
BseGI GGATG 4 cut(s) 60, 2672, 2794, 2932
BseLI CCNNNNNNNGG 7 cut(s) 319, 905, 1294, 1400, 2161, 3350, 3502
BseMI GCAATG 3 cut(s) 104, 2329, 3305
BseMII CTCAG 9 cut(s) 617, 1421, 2019, 2414, 2426, 2506, 2988, 3236, 3512
BseNI ACTGG 4 cut(s) 491, 596, 1118, 2679
BseRI GAGGAG 6 cut(s) 1674, 1818, 1821, 2094, 2959, 3270
BseXI GCAGC 3 cut(s) 222, 258, 276
BshFI GGCC 5 cut(s) 323, 663, 2303, 3132, 3277
BshNI GGYRCC 2 cut(s) 1411, 1472
BsiHKCI CYCGRG 1 cut(s) 3143
BsiSI CCGG 4 cut(s) 737, 1077, 2450, 3057
BslFI GGGAC 7 cut(s) 661, 949, 1080, 1183, 1232, 2178, 2655
BslI CCNNNNNNNGG 7 cut(s) 319, 905, 1294, 1400, 2161, 3350, 3502
BsmAI GTCTC 6 cut(s) 290, 915, 1631, 1775, 3187, 3553
BsmBI CGTCTC 1 cut(s) 3553
BsmFI GGGAC 7 cut(s) 661, 949, 1080, 1183, 1232, 2178, 2655
BsmI GAATGC 3 cut(s) 188, 1532, 2757
BsnI GGCC 5 cut(s) 323, 663, 2303, 3132, 3277
Bso31I GGTCTC 1 cut(s) 915
BsoBI CYCGRG 1 cut(s) 3143
Bsp13I TCCGGA 1 cut(s) 2449
BspACI CCGC 5 cut(s) 66, 2638, 3088, 3129, 3297
BspANI GGCC 5 cut(s) 323, 663, 2303, 3132, 3277
BspCNI CTCAG 9 cut(s) 618, 1420, 2018, 2413, 2427, 2505, 2989, 3235, 3511
BspEI TCCGGA 1 cut(s) 2449
BspLI GGNNCC 6 cut(s) 741, 1413, 1474, 2302, 3209, 3276
BspPI GGATC 6 cut(s) 912, 1030, 1656, 2995, 3202, 3215
BspQI GCTCTTC 1 cut(s) 349
BspT107I GGYRCC 2 cut(s) 1411, 1472
BspTI CTTAAG 3 cut(s) 922, 977, 2362
BspTNI GGTCTC 1 cut(s) 915
BsrBI CCGCTC 1 cut(s) 3129
BsrDI GCAATG 3 cut(s) 104, 2329, 3305
BsrI ACTGG 4 cut(s) 491, 596, 1118, 2679
BssECI CCNNGG 4 cut(s) 1644, 1665, 1809, 2085
BssNAI GTATAC 1 cut(s) 2231
BssNI GRCGYC 1 cut(s) 2777
BssT1I CCWWGG 3 cut(s) 1665, 1809, 2085
Bst1107I GTATAC 1 cut(s) 2231
Bst2UI CCWGG 3 cut(s) 1067, 1646, 2745
Bst4CI ACNGT 2 cut(s) 49, 83
Bst6I CTCTTC 7 cut(s) 35, 349, 918, 1200, 1273, 1692, 2417
BstACI GRCGYC 1 cut(s) 2777
BstAFI CTTAAG 3 cut(s) 922, 977, 2362
BstBAI YACGTR 1 cut(s) 398
BstC8I GCNNGC 2 cut(s) 518, 2769
BstEII GGTNACC 1 cut(s) 950
BstF5I GGATG 4 cut(s) 60, 2672, 2794, 2932
BstMAI GTCTC 6 cut(s) 290, 915, 1631, 1775, 3187, 3553
BstNI CCWGG 3 cut(s) 1067, 1646, 2745
BstNSI RCATGY 6 cut(s) 520, 643, 1075, 2696, 3402, 3536
BstPI GGTNACC 1 cut(s) 950
BstSCI CCNGG 4 cut(s) 1065, 1076, 1644, 2743
BstV1I GCAGC 3 cut(s) 222, 258, 276
BstX2I RGATCY 3 cut(s) 1648, 3106, 3207
BstYI RGATCY 3 cut(s) 1648, 3106, 3207
BstZ17I GTATAC 1 cut(s) 2231
Bsu36I CCTNAGG 2 cut(s) 1407, 2997
BsuI GTATCC 2 cut(s) 1901, 3286
BsuRI GGCC 5 cut(s) 323, 663, 2303, 3132, 3277
BtsCI GGATG 4 cut(s) 60, 2672, 2794, 2932
BtsI GCAGTG 1 cut(s) 614
BtsIMutI CAGTG 7 cut(s) 45, 484, 614, 1111, 1390, 2686, 3385
Cac8I GCNNGC 2 cut(s) 518, 2769
CaiI CAGNNNCTG 2 cut(s) 81, 2873
Cfr13I GGNCC 9 cut(s) 662, 1403, 1576, 1720, 1999, 2301, 2640, 2870, 3275
CseI GACGC 1 cut(s) 2766
Csp6I GTAC 3 cut(s) 177, 2858, 3243
CspCI CAANNNNNGTGG 8 cut(s) 1366, 1401, 2311, 2346, 2419, 2454, 2662, 2697
CviQI GTAC 3 cut(s) 177, 2858, 3243
DraI TTTAAA 1 cut(s) 2559
EaeI YGGCCR 2 cut(s) 321, 3130
Eam1104I CTCTTC 7 cut(s) 35, 349, 918, 1200, 1273, 1692, 2417
EarI CTCTTC 7 cut(s) 35, 349, 918, 1200, 1273, 1692, 2417
Eco130I CCWWGG 3 cut(s) 1665, 1809, 2085
Eco31I GGTCTC 1 cut(s) 915
Eco32I GATATC 1 cut(s) 573
Eco47I GGWCC 6 cut(s) 1403, 1576, 1720, 1999, 2640, 2870
Eco57I CTGAAG 6 cut(s) 290, 1366, 1868, 1898, 2144, 2167
Eco81I CCTNAGG 2 cut(s) 1407, 2997
Eco88I CYCGRG 1 cut(s) 3143
Eco91I GGTNACC 1 cut(s) 950
EcoO109I RGGNCCY 3 cut(s) 662, 2870, 3275
EcoO65I GGTNACC 1 cut(s) 950
EcoRI GAATTC 2 cut(s) 169, 3346
EcoRII CCWGG 3 cut(s) 1065, 1644, 2743
EcoRV GATATC 1 cut(s) 573
EcoT14I CCWWGG 3 cut(s) 1665, 1809, 2085
ErhI CCWWGG 3 cut(s) 1665, 1809, 2085
Esp3I CGTCTC 1 cut(s) 3553
FalI AAGNNNNNCTT 6 cut(s) 1338, 1370, 1671, 1703, 3107, 3139
FaqI GGGAC 7 cut(s) 661, 949, 1080, 1183, 1232, 2178, 2655
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 1 cut(s) 2230
Fnu4HI GCNGC 5 cut(s) 211, 247, 265, 3089, 3130
FokI GGATG 4 cut(s) 47, 2679, 2801, 2939
Fsp4HI GCNGC 5 cut(s) 211, 247, 265, 3089, 3130
FspBI CTAG 7 cut(s) 1416, 1676, 1820, 1862, 2198, 2226, 2486
GluI GCNGC 5 cut(s) 211, 247, 265, 3089, 3130
GsuI CTGGAG 1 cut(s) 3372
HaeIII GGCC 5 cut(s) 323, 663, 2303, 3132, 3277
HapII CCGG 4 cut(s) 737, 1077, 2450, 3057
HgaI GACGC 1 cut(s) 2766
Hin1I GRCGYC 1 cut(s) 2777
HincII GTYRAC 2 cut(s) 1950, 2536
HindII GTYRAC 2 cut(s) 1950, 2536
HindIII AAGCTT 4 cut(s) 155, 368, 686, 1880
HpaII CCGG 4 cut(s) 737, 1077, 2450, 3057
HphI GGTGA 6 cut(s) 962, 1825, 2258, 2747, 2944, 3046
Hpy166II GTNNAC 6 cut(s) 73, 1560, 1950, 2231, 2536, 3538
Hpy8I GTNNAC 6 cut(s) 73, 1560, 1950, 2231, 2536, 3538
Hpy99I CGWCG 1 cut(s) 3422
HpyCH4III ACNGT 2 cut(s) 49, 83
HpyCH4IV ACGT 2 cut(s) 397, 3562
HpySE526I ACGT 2 cut(s) 397, 3562
Hsp92I GRCGYC 1 cut(s) 2777
Kpn2I TCCGGA 1 cut(s) 2449
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 6 cut(s) 114, 739, 1687, 1831, 1928, 2107
Lsp1109I GCAGC 3 cut(s) 222, 258, 276
LweI GCATC 3 cut(s) 391, 2881, 3075
MaeI CTAG 7 cut(s) 1416, 1676, 1820, 1862, 2198, 2226, 2486
MaeII ACGT 2 cut(s) 397, 3562
MbiI CCGCTC 1 cut(s) 3129
MfeI CAATTG 3 cut(s) 360, 2035, 3092
MflI RGATCY 3 cut(s) 1648, 3106, 3207
MlyI GAGTC 8 cut(s) 260, 683, 756, 1633, 1777, 1810, 2383, 3107
MmeI TCCRAC 7 cut(s) 1542, 1755, 1899, 2667, 2822, 2904, 2997
MroI TCCGGA 1 cut(s) 2449
MslI CAYNNNNRTG 1 cut(s) 3177
MspA1I CMGCKG 2 cut(s) 2237, 3502
MspCI CTTAAG 3 cut(s) 922, 977, 2362
MspI CCGG 4 cut(s) 737, 1077, 2450, 3057
MspR9I CCNGG 4 cut(s) 1067, 1078, 1646, 2745
MunI CAATTG 3 cut(s) 360, 2035, 3092
Mva1269I GAATGC 3 cut(s) 188, 1532, 2757
MvaI CCWGG 3 cut(s) 1067, 1646, 2745
NciI CCSGG 1 cut(s) 1078
NlaIV GGNNCC 6 cut(s) 741, 1413, 1474, 2302, 3209, 3276
NmeAIII GCCGAG 1 cut(s) 2850
NmuCI GTSAC 5 cut(s) 950, 1428, 1813, 2246, 3423
NspI RCATGY 6 cut(s) 520, 643, 1075, 2696, 3402, 3536
PaeI GCATGC 1 cut(s) 520
PciI ACATGT 2 cut(s) 1071, 3398
PciSI GCTCTTC 1 cut(s) 349
PcsI WCGNNNNNNNCGW 1 cut(s) 1149
PctI GAATGC 3 cut(s) 188, 1532, 2757
PfeI GAWTC 4 cut(s) 137, 781, 1594, 2792
PflMI CCANNNNNTGG 1 cut(s) 905
PfoI TCCNGGA 1 cut(s) 1076
PkrI GCNGC 5 cut(s) 212, 248, 266, 3090, 3131
PleI GAGTC 8 cut(s) 259, 682, 755, 1632, 1776, 1810, 2383, 3106
PpsI GAGTC 8 cut(s) 259, 682, 755, 1632, 1776, 1810, 2383, 3106
Ppu21I YACGTR 1 cut(s) 398
PpuMI RGGWCCY 1 cut(s) 2870
PscI ACATGT 2 cut(s) 1071, 3398
PshBI ATTAAT 1 cut(s) 1128
Psp5II RGGWCCY 1 cut(s) 2870
Psp6I CCWGG 3 cut(s) 1065, 1644, 2743
PspEI GGTNACC 1 cut(s) 950
PspGI CCWGG 3 cut(s) 1065, 1644, 2743
PspN4I GGNNCC 6 cut(s) 741, 1413, 1474, 2302, 3209, 3276
PspPI GGNCC 9 cut(s) 662, 1403, 1576, 1720, 1999, 2301, 2640, 2870, 3275
PspPPI RGGWCCY 1 cut(s) 2870
PstNI CAGNNNCTG 2 cut(s) 81, 2873
PsuI RGATCY 3 cut(s) 1648, 3106, 3207
PvuII CAGCTG 2 cut(s) 2237, 3502
RsaI GTAC 3 cut(s) 178, 2859, 3244
RsaNI GTAC 3 cut(s) 177, 2858, 3243
RseI CAYNNNNRTG 1 cut(s) 3177
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 5 cut(s) 211, 247, 265, 3089, 3130
Sau96I GGNCC 9 cut(s) 662, 1403, 1576, 1720, 1999, 2301, 2640, 2870, 3275
SchI GAGTC 8 cut(s) 260, 683, 756, 1633, 1777, 1810, 2383, 3107
ScrFI CCNGG 4 cut(s) 1067, 1078, 1646, 2745
SfaNI GCATC 3 cut(s) 391, 2881, 3075
SinI GGWCC 6 cut(s) 1403, 1576, 1720, 1999, 2640, 2870
SmiMI CAYNNNNRTG 1 cut(s) 3177
SmlI CTYRAG 7 cut(s) 922, 977, 1546, 1969, 2362, 3124, 3334
SmoI CTYRAG 7 cut(s) 922, 977, 1546, 1969, 2362, 3124, 3334
SphI GCATGC 1 cut(s) 520
SsiI CCGC 5 cut(s) 66, 2638, 3088, 3129, 3297
SspI AATATT 1 cut(s) 2836
SspMI CTAG 7 cut(s) 1416, 1676, 1820, 1862, 2198, 2226, 2486
StyD4I CCNGG 4 cut(s) 1065, 1076, 1644, 2743
StyI CCWWGG 3 cut(s) 1665, 1809, 2085
TaaI ACNGT 2 cut(s) 49, 83
TaiI ACGT 2 cut(s) 400, 3565
TaqI TCGA 5 cut(s) 173, 916, 1037, 2059, 3230
TaqII GACCGA 1 cut(s) 2398
TauI GCSGC 2 cut(s) 3091, 3132
TfiI GAWTC 4 cut(s) 137, 781, 1594, 2792
TscAI CASTG 7 cut(s) 52, 491, 621, 1118, 1390, 2686, 3385
TseFI GTSAC 5 cut(s) 950, 1428, 1813, 2246, 3423
TseI GCWGC 3 cut(s) 210, 246, 264
Tsp45I GTSAC 5 cut(s) 950, 1428, 1813, 2246, 3423
TspDTI ATGAA 5 cut(s) 1170, 1715, 1859, 2135, 2242
TspGWI ACGGA 1 cut(s) 3000
TspRI CASTG 7 cut(s) 52, 491, 621, 1118, 1390, 2686, 3385
Van91I CCANNNNNTGG 1 cut(s) 905
Vha464I CTTAAG 3 cut(s) 922, 977, 2362
VpaK11BI GGWCC 6 cut(s) 1403, 1576, 1720, 1999, 2640, 2870
VspI ATTAAT 1 cut(s) 1128
XbaI TCTAGA 5 cut(s) 1675, 1819, 1861, 2197, 2485
XceI RCATGY 6 cut(s) 520, 643, 1075, 2696, 3402, 3536
XmiI GTMKAC 1 cut(s) 2230
XspI CTAG 7 cut(s) 1416, 1676, 1820, 1862, 2198, 2226, 2486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.