receptor-like protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 951 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 515, 1514 |
| Acc36I | ACCTGC | 2 cut(s) | 691, 1401 |
| Acc65I | GGTACC | 2 cut(s) | 397, 2376 |
| AccB1I | GGYRCC | 2 cut(s) | 397, 2376 |
| AccII | CGCG | 1 cut(s) | 1047 |
| AccIII | TCCGGA | 1 cut(s) | 2281 |
| AciI | CCGC | 7 cut(s) | 341, 401, 1114, 1319, 2485, 2623, 2651 |
| AclWI | GGATC | 7 cut(s) | 29, 389, 592, 914, 1310, 2221, 2843 |
| AcoI | YGGCCR | 2 cut(s) | 126, 1500 |
| AcsI | RAATTY | 3 cut(s) | 278, 1144, 1410 |
| AcuI | CTGAAG | 4 cut(s) | 1178, 1328, 1350, 1632 |
| AdeI | CACNNNGTG | 1 cut(s) | 3144 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 18, 476, 1002, 2048, 2157, 2327, 2608, 2688, 3262 |
| AflII | CTTAAG | 2 cut(s) | 1076, 2524 |
| AflIII | ACRYGT | 2 cut(s) | 1984, 2269 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3258 |
| AjiI | CACGTC | 1 cut(s) | 2096 |
| AjnI | CCWGG | 8 cut(s) | 90, 469, 1180, 1216, 1618, 1881, 2547, 2572 |
| Alw21I | GWGCWC | 2 cut(s) | 11, 3053 |
| Alw26I | GTCTC | 2 cut(s) | 523, 2625 |
| AlwI | GGATC | 7 cut(s) | 29, 389, 592, 914, 1310, 2221, 2843 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1655, 3210 |
| Ama87I | CYCGRG | 3 cut(s) | 361, 1436, 3031 |
| Aor13HI | TCCGGA | 1 cut(s) | 2281 |
| AoxI | GGCC | 4 cut(s) | 126, 1072, 1500, 2434 |
| ApeKI | GCWGC | 8 cut(s) | 338, 992, 1010, 1013, 2420, 2620, 2648, 3210 |
| ApoI | RAATTY | 3 cut(s) | 278, 1144, 1410 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2346 |
| Asp718I | GGTACC | 2 cut(s) | 397, 2376 |
| AspA2I | CCTAGG | 1 cut(s) | 2602 |
| AspS9I | GGNCC | 4 cut(s) | 1643, 2435, 2875, 3252 |
| AsuC2I | CCSGG | 1 cut(s) | 125 |
| AsuHPI | GGTGA | 8 cut(s) | 169, 506, 1239, 1364, 2126, 2521, 3259, 3289 |
| AvaI | CYCGRG | 3 cut(s) | 361, 1436, 3031 |
| AvaII | GGWCC | 3 cut(s) | 1643, 2875, 3252 |
| AvrII | CCTAGG | 1 cut(s) | 2602 |
| AxyI | CCTNAGG | 1 cut(s) | 579 |
| BaeGI | GKGCMC | 1 cut(s) | 3151 |
| BalI | TGGCCA | 1 cut(s) | 1502 |
| BanI | GGYRCC | 2 cut(s) | 397, 2376 |
| BanII | GRGCYC | 3 cut(s) | 11, 31, 3053 |
| BauI | CACGAG | 2 cut(s) | 1026, 2103 |
| BbsI | GAAGAC | 1 cut(s) | 2501 |
| Bbv12I | GWGCWC | 2 cut(s) | 11, 3053 |
| BbvI | GCAGC | 8 cut(s) | 350, 997, 1004, 1025, 2407, 2632, 2660, 3197 |
| BccI | CCATC | 9 cut(s) | 386, 485, 817, 1047, 1999, 2352, 2405, 2690, 3026 |
| BceAI | ACGGC | 3 cut(s) | 61, 2746, 3231 |
| BciT130I | CCWGG | 8 cut(s) | 92, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| BclI | TGATCA | 3 cut(s) | 939, 961, 3201 |
| BcnI | CCSGG | 1 cut(s) | 125 |
| BcoDI | GTCTC | 2 cut(s) | 523, 2625 |
| BfaI | CTAG | 9 cut(s) | 534, 1002, 1125, 1307, 1916, 2408, 2540, 2603, 3152 |
| BfmI | CTRYAG | 3 cut(s) | 684, 817, 1011 |
| BfrI | CTTAAG | 2 cut(s) | 1076, 2524 |
| BfuAI | ACCTGC | 2 cut(s) | 691, 1401 |
| BisI | GCNGC | 9 cut(s) | 339, 993, 1011, 1014, 2421, 2621, 2624, 2649, 3211 |
| BlnI | CCTAGG | 1 cut(s) | 2602 |
| BlpI | GCTNAGC | 1 cut(s) | 2428 |
| BlsI | GCNGC | 9 cut(s) | 340, 994, 1012, 1015, 2422, 2622, 2625, 2650, 3212 |
| BmcAI | AGTACT | 2 cut(s) | 218, 1327 |
| Bme1390I | CCNGG | 9 cut(s) | 92, 125, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| Bme18I | GGWCC | 3 cut(s) | 1643, 2875, 3252 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3258 |
| BmeT110I | CYCGRG | 3 cut(s) | 361, 1436, 3031 |
| BmgBI | CACGTC | 1 cut(s) | 2096 |
| BmgT120I | GGNCC | 4 cut(s) | 1643, 2435, 2875, 3252 |
| BmiI | GGNNCC | 8 cut(s) | 399, 829, 1275, 1644, 2016, 2378, 2680, 3254 |
| BmrFI | CCNGG | 9 cut(s) | 92, 125, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| BmrI | ACTGGG | 1 cut(s) | 2375 |
| BmsI | GCATC | 8 cut(s) | 412, 452, 721, 1691, 2072, 2352, 2388, 2837 |
| BmuI | ACTGGG | 1 cut(s) | 2375 |
| BoxI | GACNNNNGTC | 2 cut(s) | 867, 3033 |
| BpiI | GAAGAC | 1 cut(s) | 2501 |
| BpmI | CTGGAG | 3 cut(s) | 1989, 2493, 2836 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2326 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2428 |
| BpuEI | CTTGAG | 2 cut(s) | 1767, 2373 |
| BpuMI | CCSGG | 1 cut(s) | 125 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1584 |
| BsaJI | CCNNGG | 5 cut(s) | 1503, 1935, 2547, 2602, 2939 |
| BsaWI | WCCGGW | 1 cut(s) | 2281 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2599, 2629, 2809, 2839 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 18, 476, 1002, 2048, 2157, 2327, 2608, 2688, 3262 |
| Bse1I | ACTGG | 5 cut(s) | 1609, 2351, 2381, 2819, 3001 |
| Bse21I | CCTNAGG | 1 cut(s) | 579 |
| Bse3DI | GCAATG | 3 cut(s) | 2021, 2748, 3081 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1584 |
| BseAI | TCCGGA | 1 cut(s) | 2281 |
| BseBI | CCWGG | 8 cut(s) | 92, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| BseDI | CCNNGG | 5 cut(s) | 1503, 1935, 2547, 2602, 2939 |
| BseGI | GGATG | 7 cut(s) | 467, 828, 1706, 2041, 2166, 2367, 2494 |
| BseJI | GATNNNNATC | 1 cut(s) | 1584 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 18, 476, 1002, 2048, 2157, 2327, 2608, 2688, 3262 |
| BseMI | GCAATG | 3 cut(s) | 2021, 2748, 3081 |
| BseMII | CTCAG | 9 cut(s) | 161, 570, 917, 1227, 1503, 2340, 2442, 3038, 3066 |
| BseNI | ACTGG | 5 cut(s) | 1609, 2351, 2381, 2819, 3001 |
| BseRI | GAGGAG | 3 cut(s) | 1609, 1832, 2467 |
| BseSI | GKGCMC | 1 cut(s) | 3151 |
| BseXI | GCAGC | 8 cut(s) | 350, 997, 1004, 1025, 2407, 2632, 2660, 3197 |
| BseYI | CCCAGC | 2 cut(s) | 1655, 2070 |
| BsgI | GTGCAG | 4 cut(s) | 735, 1020, 1864, 3196 |
| Bsh1236I | CGCG | 1 cut(s) | 1047 |
| BshFI | GGCC | 4 cut(s) | 128, 1074, 1502, 2436 |
| BshNI | GGYRCC | 2 cut(s) | 397, 2376 |
| BsiHKAI | GWGCWC | 2 cut(s) | 11, 3053 |
| BsiHKCI | CYCGRG | 3 cut(s) | 361, 1436, 3031 |
| BsiSI | CCGG | 4 cut(s) | 125, 459, 2282, 2584 |
| BslFI | GGGAC | 4 cut(s) | 609, 1096, 1926, 2530 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 18, 476, 1002, 2048, 2157, 2327, 2608, 2688, 3262 |
| BsmAI | GTCTC | 2 cut(s) | 523, 2625 |
| BsmBI | CGTCTC | 1 cut(s) | 2625 |
| BsmFI | GGGAC | 4 cut(s) | 609, 1096, 1926, 2530 |
| BsmI | GAATGC | 1 cut(s) | 254 |
| BsnI | GGCC | 4 cut(s) | 128, 1074, 1502, 2436 |
| BsoBI | CYCGRG | 3 cut(s) | 361, 1436, 3031 |
| Bsp1286I | GDGCHC | 4 cut(s) | 11, 31, 3053, 3151 |
| Bsp13I | TCCGGA | 1 cut(s) | 2281 |
| Bsp1407I | TGTACA | 1 cut(s) | 332 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2428 |
| BspACI | CCGC | 7 cut(s) | 341, 401, 1114, 1319, 2485, 2623, 2651 |
| BspANI | GGCC | 4 cut(s) | 128, 1074, 1502, 2436 |
| BspCNI | CTCAG | 9 cut(s) | 160, 571, 918, 1228, 1504, 2339, 2441, 3039, 3065 |
| BspEI | TCCGGA | 1 cut(s) | 2281 |
| BspFNI | CGCG | 1 cut(s) | 1047 |
| BspHI | TCATGA | 1 cut(s) | 2338 |
| BspLI | GGNNCC | 8 cut(s) | 399, 829, 1275, 1644, 2016, 2378, 2680, 3254 |
| BspMAI | CTGCAG | 3 cut(s) | 688, 821, 1015 |
| BspMI | ACCTGC | 2 cut(s) | 691, 1401 |
| BspPI | GGATC | 7 cut(s) | 29, 389, 592, 914, 1310, 2221, 2843 |
| BspT107I | GGYRCC | 2 cut(s) | 397, 2376 |
| BspTI | CTTAAG | 2 cut(s) | 1076, 2524 |
| BsrDI | GCAATG | 3 cut(s) | 2021, 2748, 3081 |
| BsrGI | TGTACA | 1 cut(s) | 332 |
| BsrI | ACTGG | 5 cut(s) | 1609, 2351, 2381, 2819, 3001 |
| BssECI | CCNNGG | 5 cut(s) | 1503, 1935, 2547, 2602, 2939 |
| BssSI | CACGAG | 2 cut(s) | 1026, 2103 |
| BssT1I | CCWWGG | 3 cut(s) | 1503, 2602, 2939 |
| Bst2BI | CACGAG | 2 cut(s) | 1026, 2103 |
| Bst2UI | CCWGG | 8 cut(s) | 92, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| Bst6I | CTCTTC | 2 cut(s) | 2226, 3223 |
| BstAFI | CTTAAG | 2 cut(s) | 1076, 2524 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1022 |
| BstAUI | TGTACA | 1 cut(s) | 332 |
| BstC8I | GCNNGC | 8 cut(s) | 164, 1045, 1374, 1847, 2245, 2425, 2434, 2646 |
| BstDSI | CCRYGG | 1 cut(s) | 1935 |
| BstEII | GGTNACC | 1 cut(s) | 3265 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2155 |
| BstF5I | GGATG | 7 cut(s) | 467, 828, 1706, 2041, 2166, 2367, 2494 |
| BstFNI | CGCG | 1 cut(s) | 1047 |
| BstMAI | GTCTC | 2 cut(s) | 523, 2625 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 87, 1022, 2429, 2433, 3092, 3155 |
| BstNI | CCWGG | 8 cut(s) | 92, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| BstNSI | RCATGY | 3 cut(s) | 1025, 1864, 3122 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 867, 3033 |
| BstPI | GGTNACC | 1 cut(s) | 3265 |
| BstSCI | CCNGG | 9 cut(s) | 90, 123, 469, 1180, 1216, 1618, 1881, 2547, 2572 |
| BstSFI | CTRYAG | 3 cut(s) | 684, 817, 1011 |
| BstSLI | GKGCMC | 1 cut(s) | 3151 |
| BstUI | CGCG | 1 cut(s) | 1047 |
| BstV1I | GCAGC | 8 cut(s) | 350, 997, 1004, 1025, 2407, 2632, 2660, 3197 |
| BstV2I | GAAGAC | 1 cut(s) | 2501 |
| BstX2I | RGATCY | 2 cut(s) | 906, 2213 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 650, 2358 |
| BstYI | RGATCY | 2 cut(s) | 906, 2213 |
| Bsu36I | CCTNAGG | 1 cut(s) | 579 |
| BsuRI | GGCC | 4 cut(s) | 128, 1074, 1502, 2436 |
| BtgI | CCRYGG | 1 cut(s) | 1935 |
| BtrI | CACGTC | 1 cut(s) | 2096 |
| BtsCI | GGATG | 7 cut(s) | 467, 828, 1706, 2041, 2166, 2367, 2494 |
| BtsI | GCAGTG | 1 cut(s) | 1929 |
| BtsIMutI | CAGTG | 8 cut(s) | 384, 923, 1509, 1704, 1929, 2065, 2742, 3060 |
| BveI | ACCTGC | 2 cut(s) | 691, 1401 |
| Cac8I | GCNNGC | 8 cut(s) | 164, 1045, 1374, 1847, 2245, 2425, 2434, 2646 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1655, 3210 |
| CciI | TCATGA | 1 cut(s) | 2338 |
| Cfr13I | GGNCC | 4 cut(s) | 1643, 2435, 2875, 3252 |
| CseI | GACGC | 1 cut(s) | 2642 |
| CsiI | ACCWGGT | 3 cut(s) | 469, 1180, 1216 |
| DraI | TTTAAA | 1 cut(s) | 1549 |
| DraIII | CACNNNGTG | 1 cut(s) | 3144 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 515, 1514 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3258 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 515, 1514 |
| EaeI | YGGCCR | 2 cut(s) | 126, 1500 |
| Eam1104I | CTCTTC | 2 cut(s) | 2226, 3223 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3258 |
| EarI | CTCTTC | 2 cut(s) | 2226, 3223 |
| Ecl136II | GAGCTC | 2 cut(s) | 9, 3051 |
| Eco130I | CCWWGG | 3 cut(s) | 1503, 2602, 2939 |
| Eco147I | AGGCCT | 1 cut(s) | 1074 |
| Eco24I | GRGCYC | 3 cut(s) | 11, 31, 3053 |
| Eco47I | GGWCC | 3 cut(s) | 1643, 2875, 3252 |
| Eco53kI | GAGCTC | 2 cut(s) | 9, 3051 |
| Eco57I | CTGAAG | 4 cut(s) | 1178, 1328, 1350, 1632 |
| Eco81I | CCTNAGG | 1 cut(s) | 579 |
| Eco88I | CYCGRG | 3 cut(s) | 361, 1436, 3031 |
| Eco91I | GGTNACC | 1 cut(s) | 3265 |
| EcoICRI | GAGCTC | 2 cut(s) | 9, 3051 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2155 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1643 |
| EcoO65I | GGTNACC | 1 cut(s) | 3265 |
| EcoRI | GAATTC | 2 cut(s) | 278, 1144 |
| EcoRII | CCWGG | 8 cut(s) | 90, 469, 1180, 1216, 1618, 1881, 2547, 2572 |
| EcoT14I | CCWWGG | 3 cut(s) | 1503, 2602, 2939 |
| EcoT22I | ATGCAT | 2 cut(s) | 901, 1426 |
| EcoT38I | GRGCYC | 3 cut(s) | 11, 31, 3053 |
| ErhI | CCWWGG | 3 cut(s) | 1503, 2602, 2939 |
| Esp3I | CGTCTC | 1 cut(s) | 2625 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1059, 1091, 2181, 2213 |
| FaqI | GGGAC | 4 cut(s) | 609, 1096, 1926, 2530 |
| FauI | CCCGC | 2 cut(s) | 1121, 2478 |
| FauNDI | CATATG | 2 cut(s) | 210, 1426 |
| FbaI | TGATCA | 3 cut(s) | 939, 961, 3201 |
| Fnu4HI | GCNGC | 9 cut(s) | 339, 993, 1011, 1014, 2421, 2621, 2624, 2649, 3211 |
| FokI | GGATG | 7 cut(s) | 474, 835, 1713, 2048, 2173, 2374, 2501 |
| FriOI | GRGCYC | 3 cut(s) | 11, 31, 3053 |
| Fsp4HI | GCNGC | 9 cut(s) | 339, 993, 1011, 1014, 2421, 2621, 2624, 2649, 3211 |
| FspBI | CTAG | 9 cut(s) | 534, 1002, 1125, 1307, 1916, 2408, 2540, 2603, 3152 |
| GluI | GCNGC | 9 cut(s) | 339, 993, 1011, 1014, 2421, 2621, 2624, 2649, 3211 |
| GsaI | CCCAGC | 2 cut(s) | 1659, 2074 |
| GsuI | CTGGAG | 3 cut(s) | 1989, 2493, 2836 |
| HaeIII | GGCC | 4 cut(s) | 128, 1074, 1502, 2436 |
| HapII | CCGG | 4 cut(s) | 125, 459, 2282, 2584 |
| HgaI | GACGC | 1 cut(s) | 2642 |
| HincII | GTYRAC | 3 cut(s) | 411, 508, 858 |
| HindII | GTYRAC | 3 cut(s) | 411, 508, 858 |
| HindIII | AAGCTT | 3 cut(s) | 164, 272, 3156 |
| HpaI | GTTAAC | 1 cut(s) | 411 |
| HpaII | CCGG | 4 cut(s) | 125, 459, 2282, 2584 |
| HphI | GGTGA | 8 cut(s) | 169, 506, 1239, 1364, 2126, 2521, 3259, 3289 |
| Hpy166II | GTNNAC | 6 cut(s) | 411, 508, 858, 2116, 2986, 3287 |
| Hpy8I | GTNNAC | 6 cut(s) | 411, 508, 858, 2116, 2986, 3287 |
| Hpy99I | CGWCG | 3 cut(s) | 62, 2050, 2097 |
| HpyCH4IV | ACGT | 3 cut(s) | 1984, 2095, 2269 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 87, 1022, 2429, 2433, 3092, 3155 |
| HpySE526I | ACGT | 3 cut(s) | 1984, 2095, 2269 |
| Kpn2I | TCCGGA | 1 cut(s) | 2281 |
| KpnI | GGTACC | 2 cut(s) | 401, 2380 |
| Ksp22I | TGATCA | 3 cut(s) | 939, 961, 3201 |
| KspAI | GTTAAC | 1 cut(s) | 411 |
| LmnI | GCTCC | 5 cut(s) | 6, 14, 251, 1652, 2678 |
| Lsp1109I | GCAGC | 8 cut(s) | 350, 997, 1004, 1025, 2407, 2632, 2660, 3197 |
| LweI | GCATC | 8 cut(s) | 412, 452, 721, 1691, 2072, 2352, 2388, 2837 |
| MabI | ACCWGGT | 3 cut(s) | 469, 1180, 1216 |
| MaeI | CTAG | 9 cut(s) | 534, 1002, 1125, 1307, 1916, 2408, 2540, 2603, 3152 |
| MaeII | ACGT | 3 cut(s) | 1984, 2095, 2269 |
| MaeIII | GTNAC | 7 cut(s) | 142, 659, 1600, 1708, 2667, 3005, 3265 |
| MfeI | CAATTG | 1 cut(s) | 448 |
| MflI | RGATCY | 2 cut(s) | 906, 2213 |
| MhlI | GDGCHC | 4 cut(s) | 11, 31, 3053, 3151 |
| MlsI | TGGCCA | 1 cut(s) | 1502 |
| MluNI | TGGCCA | 1 cut(s) | 1502 |
| MlyI | GAGTC | 2 cut(s) | 1516, 3043 |
| MmeI | TCCRAC | 1 cut(s) | 1072 |
| Mox20I | TGGCCA | 1 cut(s) | 1502 |
| Mph1103I | ATGCAT | 2 cut(s) | 901, 1426 |
| MroI | TCCGGA | 1 cut(s) | 2281 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2346 |
| MscI | TGGCCA | 1 cut(s) | 1502 |
| MslI | CAYNNNNRTG | 4 cut(s) | 593, 705, 2123, 3272 |
| Msp20I | TGGCCA | 1 cut(s) | 1502 |
| MspA1I | CMGCKG | 3 cut(s) | 341, 2623, 2651 |
| MspCI | CTTAAG | 2 cut(s) | 1076, 2524 |
| MspI | CCGG | 4 cut(s) | 125, 459, 2282, 2584 |
| MspR9I | CCNGG | 9 cut(s) | 92, 125, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| MunI | CAATTG | 1 cut(s) | 448 |
| Mva1269I | GAATGC | 1 cut(s) | 254 |
| MvaI | CCWGG | 8 cut(s) | 92, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| MvnI | CGCG | 1 cut(s) | 1047 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 87, 1022, 2429, 2433, 3092, 3155 |
| NciI | CCSGG | 1 cut(s) | 125 |
| NdeI | CATATG | 2 cut(s) | 210, 1426 |
| NlaIV | GGNNCC | 8 cut(s) | 399, 829, 1275, 1644, 2016, 2378, 2680, 3254 |
| NmuCI | GTSAC | 3 cut(s) | 659, 1708, 3265 |
| NsiI | ATGCAT | 2 cut(s) | 901, 1426 |
| NspI | RCATGY | 3 cut(s) | 1025, 1864, 3122 |
| PaeR7I | CTCGAG | 2 cut(s) | 361, 1436 |
| PagI | TCATGA | 1 cut(s) | 2338 |
| PceI | AGGCCT | 1 cut(s) | 1074 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2101 |
| PctI | GAATGC | 1 cut(s) | 254 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2346 |
| PfeI | GAWTC | 8 cut(s) | 585, 892, 976, 1764, 1822, 1931, 1962, 2335 |
| PkrI | GCNGC | 9 cut(s) | 340, 994, 1012, 1015, 2422, 2622, 2625, 2650, 3212 |
| PleI | GAGTC | 2 cut(s) | 1516, 3042 |
| PpsI | GAGTC | 2 cut(s) | 1516, 3042 |
| PpuMI | RGGWCCY | 1 cut(s) | 1643 |
| PshAI | GACNNNNGTC | 2 cut(s) | 867, 3033 |
| PsiI | TTATAA | 1 cut(s) | 951 |
| Psp124BI | GAGCTC | 2 cut(s) | 11, 3053 |
| Psp5II | RGGWCCY | 1 cut(s) | 1643 |
| Psp6I | CCWGG | 8 cut(s) | 90, 469, 1180, 1216, 1618, 1881, 2547, 2572 |
| PspEI | GGTNACC | 1 cut(s) | 3265 |
| PspFI | CCCAGC | 2 cut(s) | 1655, 2070 |
| PspGI | CCWGG | 8 cut(s) | 90, 469, 1180, 1216, 1618, 1881, 2547, 2572 |
| PspN4I | GGNNCC | 8 cut(s) | 399, 829, 1275, 1644, 2016, 2378, 2680, 3254 |
| PspPI | GGNCC | 4 cut(s) | 1643, 2435, 2875, 3252 |
| PspPPI | RGGWCCY | 1 cut(s) | 1643 |
| PstI | CTGCAG | 3 cut(s) | 688, 821, 1015 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1655, 3210 |
| PsuI | RGATCY | 2 cut(s) | 906, 2213 |
| RseI | CAYNNNNRTG | 4 cut(s) | 593, 705, 2123, 3272 |
| SacI | GAGCTC | 2 cut(s) | 11, 3053 |
| SatI | GCNGC | 9 cut(s) | 339, 993, 1011, 1014, 2421, 2621, 2624, 2649, 3211 |
| Sau96I | GGNCC | 4 cut(s) | 1643, 2435, 2875, 3252 |
| SbfI | CCTGCAGG | 1 cut(s) | 688 |
| ScaI | AGTACT | 2 cut(s) | 218, 1327 |
| SchI | GAGTC | 2 cut(s) | 1516, 3043 |
| ScrFI | CCNGG | 9 cut(s) | 92, 125, 471, 1182, 1218, 1620, 1883, 2549, 2574 |
| SdaI | CCTGCAGG | 1 cut(s) | 688 |
| SduI | GDGCHC | 4 cut(s) | 11, 31, 3053, 3151 |
| SexAI | ACCWGGT | 3 cut(s) | 469, 1180, 1216 |
| SfaNI | GCATC | 8 cut(s) | 412, 452, 721, 1691, 2072, 2352, 2388, 2837 |
| SfcI | CTRYAG | 3 cut(s) | 684, 817, 1011 |
| Sfr274I | CTCGAG | 2 cut(s) | 361, 1436 |
| SinI | GGWCC | 3 cut(s) | 1643, 2875, 3252 |
| SlaI | CTCGAG | 2 cut(s) | 361, 1436 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 593, 705, 2123, 3272 |
| SmlI | CTYRAG | 6 cut(s) | 361, 1076, 1436, 1782, 2388, 2524 |
| SmoI | CTYRAG | 6 cut(s) | 361, 1076, 1436, 1782, 2388, 2524 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 688 |
| SseBI | AGGCCT | 1 cut(s) | 1074 |
| SsiI | CCGC | 7 cut(s) | 341, 401, 1114, 1319, 2485, 2623, 2651 |
| SspI | AATATT | 1 cut(s) | 1363 |
| SspMI | CTAG | 9 cut(s) | 534, 1002, 1125, 1307, 1916, 2408, 2540, 2603, 3152 |
| SstI | GAGCTC | 2 cut(s) | 11, 3053 |
| StuI | AGGCCT | 1 cut(s) | 1074 |
| StyD4I | CCNGG | 9 cut(s) | 90, 123, 469, 1180, 1216, 1618, 1881, 2547, 2572 |
| StyI | CCWWGG | 3 cut(s) | 1503, 2602, 2939 |
| TaiI | ACGT | 3 cut(s) | 1987, 2098, 2272 |
| TaqI | TCGA | 8 cut(s) | 305, 325, 362, 871, 1437, 1536, 1624, 2092 |
| TaqII | GACCGA | 1 cut(s) | 2577 |
| TatI | WGTACW | 5 cut(s) | 216, 332, 1325, 2589, 2985 |
| TauI | GCSGC | 1 cut(s) | 2626 |
| TfiI | GAWTC | 8 cut(s) | 585, 892, 976, 1764, 1822, 1931, 1962, 2335 |
| TscAI | CASTG | 8 cut(s) | 391, 930, 1516, 1711, 1929, 2065, 2749, 3060 |
| TseFI | GTSAC | 3 cut(s) | 659, 1708, 3265 |
| TseI | GCWGC | 8 cut(s) | 338, 992, 1010, 1013, 2420, 2620, 2648, 3210 |
| Tsp45I | GTSAC | 3 cut(s) | 659, 1708, 3265 |
| TspGWI | ACGGA | 1 cut(s) | 1924 |
| TspRI | CASTG | 8 cut(s) | 391, 930, 1516, 1711, 1929, 2065, 2749, 3060 |
| Vha464I | CTTAAG | 2 cut(s) | 1076, 2524 |
| VpaK11BI | GGWCC | 3 cut(s) | 1643, 2875, 3252 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2155 |
| XapI | RAATTY | 3 cut(s) | 278, 1144, 1410 |
| XbaI | TCTAGA | 1 cut(s) | 2407 |
| XceI | RCATGY | 3 cut(s) | 1025, 1864, 3122 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2869 |
| XhoI | CTCGAG | 2 cut(s) | 361, 1436 |
| XmaJI | CCTAGG | 1 cut(s) | 2602 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2346 |
| XspI | CTAG | 9 cut(s) | 534, 1002, 1125, 1307, 1916, 2408, 2540, 2603, 3152 |
| ZrmI | AGTACT | 2 cut(s) | 218, 1327 |
| Zsp2I | ATGCAT | 2 cut(s) | 901, 1426 |