Rmu_sc0011028.1_g000006

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011028.1
OG0000047
Physical Location & Seq
Reverse (-)
17396 .. 20596
3201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011028.1_g000006.1.cds

Sequence Viewer

Length: 3201 bp
atgaaaactttgctacatttcttcctttccttgatcacactctgggtcagtatcatcatcccagcagttcacagccagtgtattaaagaccagcaactatcattgctccaattcaagaaaagcctcgtgttcgctgctgatttcggtccttccaccaagattgtttcttggaatgcaagtattgattgttgttcctgggtgggcgtcacttgcagccgtaatgggcgtgttctgggtcttgacataagcagccaaggtatctcagctggaattgacaatgccagcagtctcttccatcttcattatcttcaaagcctcaatctggcggacaaccaacttggcaattactctcaatcaattccatccgccataggagatctcctgaacttgaggtatctgaatttatctctgaattattattcagggcaaattcccatccagatttctcgcttgaggaggttagtagttcttgatttttctaacaattatggtgggttaaaccttggaagtccaaattttcccatgttggttcacgacttcacagagcttagagagttatatcttgatggtgtcctaatatcagaacaggggatcagtgagtggggccgagccatatcatcttccattcccaacctcagggtcctgagcatgttcaattgtcatctctcaggccgtattctcgagtcccttgccaagcttcagtatctatctgtaattagtttggcatataacaatatctctgcgccagttccaggattctttgccaacttttcaaacttgaccgtcttgggtctcagaaattgcgggttgcatggaacatttcccaaagacatctttcagttaacttctctacaaattattgacctttccttgaatgaccaacttgatggttccttgccagaattcccaaggaatgcatctcttcagtccctggaactaatcgggacaaatttttcagggttattaccaaattctattggcaacctcaaaatgctgtccaccatacatattcaaggctgcaatttcaccggaccgatccccaagtcaatgacaaaccttacacaattggtttctttgtcgatgtcttataacaatttggaaggttcaattccgtcattcagttgggccaagaatgttgtcaacatagacctttcccacaatggtctaacaggtactattagttccacccactggagaaaccttactaagctatcttatctcagtttgggatccaataagcgcaatgggaatatccaagcatctctgttttctattcccctattgtctagtctagatctttccagcaaccaattctctggtccattccctgaaatttcaaatgtgtcttcctacttgctgaatggtcctgatcttcaacttgatttgagtagcaacaatctccaagggccactacctatgtctatcttttgtttgctacgtcttaccactctagatctttcttcaaataatttaagtggctcgtttcctcttgatcgtctacaccaactgagaaatctttctaaacttgatctttcacacaataacttgtttcttacccatgattataccaatttctcatattcctcatcttctcaactcgttgacttgaggttggtgtcattgaaattgagaacatttcctaatttcttgagaaatcattcttacttgggaagtttggacctttcagataaccagataaatggcaagatacccaactggatttggagtcttagtgatcttagttacctaaatctttcttgcaactccctagattctctagaagttccttcaatgaatcccagtactttagagtaccttgacctccattccaaccagtttcatgggcaaatcccaatttttccaacaagcagtgcctattatctagatttctcaaggaattatttcagctctatcatatcgagtaccattggagatatgtttcttaacattggattcttgtcgctttcaagcaacaacctcaatggaatcattccagaatcattatgcaattcagaatctcttgaggttcttgatctgtccaataattctctgagtggcacgattccccagtgtttagctacaatgaagacgcttgcaatactcaatgtaaggagaaacaatcttacatatgttaatgaattctctcagaattgcagtttaaaaactctggacatcagtggaaatcagattcaaggccagtttctaaaatctcttgtcaactgcacccagttagaggttttaaaccttggaaataatctgataacagaaccatttccatgctttttgaggaaaacatccaccttgcgtgttcttgtcttgcgatccaataaattctatgggcgcattagatgtcgcaagactaatggcacttggccagtacttcaaatcatagacttggctcacaacaatttgagtggtgaagtacctggaacagctttgacaacttggcaggcgatgaggaccagcaaagataatgccccaaggaatatcaatagcattgaatggggtacaaggggaacttattatcaagaagatacaatcccagttaccaacaaaggtttacagatcgagttggtgaatgttttaactatcttcatctcaattgacttctcatgcaacaagttcaacggatcaatacccgaggaaattggagaactcaaatcattatatgccctcaacttgtccaacaatgctttcacaggtgcagttccatcatcattaagtaacttgagtcagctagagtccttggacctctcgagaaacaaacttagcggtcaaatcccaccggagcttacaaaactcactttcctttcattcttgaatctctcatataatcaattggtcgggaggataccaagcggtgctcaattttcaacatttgatgcagattccttcaaaggtaacaaaggattatgggggccacctttaacagcatacaatagaacagtgttctcgccaaagatggaaggaaaccattcaaatcctgggcatgagattgattgggatattatctgtcctgaaattggatttacatgtgggtttgggattgtcatcgggtcacttttgttttgcaagagatggaggaaatggtattacagagctatgtataacatgcttctaaagatattccctcagctggaagaaagattcggtcatcacaggagacatgtttatgcacatcaaagattctggagacgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1066

Amino Acids

118.86

Weight (kDa)

8.27

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1089
AccB7I CCANNNNNTGG 1 cut(s) 1191
AccI GTMKAC 1 cut(s) 1498
AciI CCGC 5 cut(s) 326, 366, 804, 2772, 2859
AclWI GGATC 6 cut(s) 599, 1030, 1224, 1237, 2316, 2638
AcoI YGGCCR 1 cut(s) 2372
AcsI RAATTY 9 cut(s) 400, 429, 514, 902, 949, 970, 1332, 2138, 2330
AcuI CTGAAG 2 cut(s) 683, 908
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 7 cut(s) 1174, 1804, 1814, 1924, 2379, 2424, 2509
AfiI CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2233, 3023, 3136
AflIII ACRYGT 2 cut(s) 3032, 3166
AjnI CCWGG 5 cut(s) 194, 751, 930, 2425, 2983
AjuI GAANNNNNNNTTGG 2 cut(s) 2678, 2710
Alw21I GWGCWC 1 cut(s) 2866
Alw26I GTCTC 4 cut(s) 293, 797, 3157, 3187
AlwI GGATC 6 cut(s) 599, 1030, 1224, 1237, 2316, 2638
AlwNI CAGNNNCTG 1 cut(s) 931
Ama87I CYCGRG 3 cut(s) 680, 2639, 2755
AoxI GGCC 7 cut(s) 604, 670, 1125, 1406, 2194, 2372, 2918
ApeKI GCWGC 4 cut(s) 134, 213, 249, 1017
ApoI RAATTY 9 cut(s) 400, 429, 514, 902, 949, 970, 1332, 2138, 2330
Asp700I GAANNNNTTC 5 cut(s) 1516, 1657, 1901, 2271, 2974
AspLEI GCGC 3 cut(s) 745, 1242, 2343
AsuHPI GGTGA 3 cut(s) 1018, 2429, 2587
AvaI CYCGRG 3 cut(s) 680, 2639, 2755
AvaII GGWCC 8 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2460, 2749
AxyI CCTNAGG 1 cut(s) 635
BalI TGGCCA 1 cut(s) 2374
BamHI GGATCC 1 cut(s) 1229
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 2 cut(s) 1338, 2093
Bbv12I GWGCWC 1 cut(s) 2866
BbvCI CCTCAGC 1 cut(s) 3132
BbvI GCAGC 4 cut(s) 121, 225, 261, 1004
BccI CCATC 8 cut(s) 303, 370, 443, 560, 881, 2719, 2956, 3072
BceAI ACGGC 2 cut(s) 201, 657
BcgI CGANNNNNNTGC 2 cut(s) 671, 705
BciT130I CCWGG 5 cut(s) 196, 753, 932, 2427, 2985
BciVI GTATCC 1 cut(s) 2844
BclI TGATCA 1 cut(s) 33
BcoDI GTCTC 4 cut(s) 293, 797, 3157, 3187
BfaI CTAG 7 cut(s) 1287, 1292, 1451, 1769, 1778, 1883, 2738
BfuI GTATCC 1 cut(s) 2844
BglII AGATCT 3 cut(s) 376, 1294, 1453
BisI GCNGC 4 cut(s) 135, 214, 250, 1018
BlsI GCNGC 4 cut(s) 136, 215, 251, 1019
BmcAI AGTACT 2 cut(s) 1804, 2379
Bme1390I CCNGG 5 cut(s) 196, 753, 932, 2427, 2985
Bme18I GGWCC 8 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2460, 2749
BmeT110I CYCGRG 3 cut(s) 680, 2639, 2755
BmiI GGNNCC 5 cut(s) 605, 641, 892, 1231, 2919
BmrFI CCNGG 5 cut(s) 196, 753, 932, 2427, 2985
BmrI ACTGGG 4 cut(s) 1794, 2062, 2221, 2537
BmsI GCATC 3 cut(s) 926, 1268, 2872
BmuI ACTGGG 4 cut(s) 1794, 2062, 2221, 2537
BpiI GAAGAC 2 cut(s) 1338, 2093
BpmI CTGGAG 1 cut(s) 1213
Bpu10I CCTNAGC 2 cut(s) 644, 3132
BpuEI CTTGAG 7 cut(s) 409, 472, 1627, 1669, 1876, 2042, 2749
BsaBI GATNNNNATC 1 cut(s) 3050
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 797
BsaWI WCCGGW 2 cut(s) 1028, 2785
BsaXI ACNNNNNCTCC 2 cut(s) 1717, 1747
Bsc4I CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2233, 3023, 3136
Bse21I CCTNAGG 1 cut(s) 635
Bse3DI GCAATG 2 cut(s) 101, 1249
Bse8I GATNNNNATC 1 cut(s) 3050
BseBI CCWGG 5 cut(s) 196, 753, 932, 2427, 2985
BseGI GGATG 4 cut(s) 57, 362, 435, 2294
BseJI GATNNNNATC 1 cut(s) 3050
BseLI CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2233, 3023, 3136
BseMI GCAATG 2 cut(s) 101, 1249
BseRI GAGGAG 1 cut(s) 469
BseXI GCAGC 4 cut(s) 121, 225, 261, 1004
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 2 cut(s) 2206, 2724
BshFI GGCC 7 cut(s) 606, 672, 1127, 1408, 2196, 2374, 2920
BsiHKAI GWGCWC 1 cut(s) 2866
BsiHKCI CYCGRG 3 cut(s) 680, 2639, 2755
BsiSI CCGG 2 cut(s) 1029, 2786
BslFI GGGAC 3 cut(s) 670, 913, 958
BslI CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2233, 3023, 3136
BsmAI GTCTC 4 cut(s) 293, 797, 3157, 3187
BsmBI CGTCTC 1 cut(s) 3187
BsmFI GGGAC 3 cut(s) 670, 913, 958
BsmI GAATGC 2 cut(s) 178, 919
BsnI GGCC 7 cut(s) 606, 672, 1127, 1408, 2196, 2374, 2920
Bso31I GGTCTC 1 cut(s) 797
BsoBI CYCGRG 3 cut(s) 680, 2639, 2755
Bsp1286I GDGCHC 1 cut(s) 2866
BspACI CCGC 5 cut(s) 326, 366, 804, 2772, 2859
BspANI GGCC 7 cut(s) 606, 672, 1127, 1408, 2196, 2374, 2920
BspLI GGNNCC 5 cut(s) 605, 641, 892, 1231, 2919
BspPI GGATC 6 cut(s) 599, 1030, 1224, 1237, 2316, 2638
BspTNI GGTCTC 1 cut(s) 797
BsrDI GCAATG 2 cut(s) 101, 1249
BssNI GRCGYC 1 cut(s) 204
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 7 cut(s) 253, 502, 908, 1402, 2245, 2480, 2745
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 5 cut(s) 196, 753, 932, 2427, 2985
Bst4CI ACNGT 2 cut(s) 784, 2947
Bst6I CTCTTC 2 cut(s) 296, 927
BstACI GRCGYC 1 cut(s) 204
BstC8I GCNNGC 3 cut(s) 283, 2094, 2451
BstF5I GGATG 4 cut(s) 57, 362, 435, 2294
BstHHI GCGC 3 cut(s) 745, 1242, 2343
BstMAI GTCTC 4 cut(s) 293, 797, 3157, 3187
BstMWI GCNNNNNNNGC 1 cut(s) 210
BstNI CCWGG 5 cut(s) 196, 753, 932, 2427, 2985
BstNSI RCATGY 4 cut(s) 652, 3036, 3115, 3170
BstSCI CCNGG 5 cut(s) 194, 751, 930, 2425, 2983
BstV1I GCAGC 4 cut(s) 121, 225, 261, 1004
BstV2I GAAGAC 2 cut(s) 1338, 2093
BstX2I RGATCY 4 cut(s) 376, 1229, 1294, 1453
BstXI CCANNNNNNTGG 4 cut(s) 887, 1316, 1700, 1841
BstYI RGATCY 4 cut(s) 376, 1229, 1294, 1453
Bsu36I CCTNAGG 1 cut(s) 635
BsuI GTATCC 1 cut(s) 2844
BsuRI GGCC 7 cut(s) 606, 672, 1127, 1408, 2196, 2374, 2920
BtgZI GCGATG 1 cut(s) 2468
BtsCI GGATG 4 cut(s) 57, 362, 435, 2294
BtsI GCAGTG 1 cut(s) 1876
BtsIMutI CAGTG 7 cut(s) 83, 601, 1189, 1876, 2075, 2182, 2952
Cac8I GCNNGC 3 cut(s) 283, 2094, 2451
CaiI CAGNNNCTG 1 cut(s) 931
CfoI GCGC 3 cut(s) 745, 1242, 2343
CpoI CGGWCCG 1 cut(s) 1031
CseI GACGC 2 cut(s) 193, 2098
Csp6I GTAC 7 cut(s) 1173, 1803, 1813, 1923, 2378, 2423, 2508
CspCI CAANNNNNGTGG 6 cut(s) 142, 177, 472, 507, 2395, 2430
CspI CGGWCCG 1 cut(s) 1031
CviQI GTAC 7 cut(s) 1173, 1803, 1813, 1923, 2378, 2423, 2508
DraI TTTAAA 2 cut(s) 2160, 2241
EaeI YGGCCR 1 cut(s) 2372
Eam1104I CTCTTC 2 cut(s) 296, 927
EarI CTCTTC 2 cut(s) 296, 927
EciI GGCGGA 2 cut(s) 341, 355
Eco130I CCWWGG 7 cut(s) 253, 502, 908, 1402, 2245, 2480, 2745
Eco31I GGTCTC 1 cut(s) 797
Eco47I GGWCC 8 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2460, 2749
Eco57I CTGAAG 2 cut(s) 683, 908
Eco81I CCTNAGG 1 cut(s) 635
Eco88I CYCGRG 3 cut(s) 680, 2639, 2755
EcoO109I RGGNCCY 1 cut(s) 640
EcoRI GAATTC 2 cut(s) 902, 2138
EcoRII CCWGG 5 cut(s) 194, 751, 930, 2425, 2983
EcoT14I CCWWGG 7 cut(s) 253, 502, 908, 1402, 2245, 2480, 2745
EcoT22I ATGCAT 1 cut(s) 919
ErhI CCWWGG 7 cut(s) 253, 502, 908, 1402, 2245, 2480, 2745
Esp3I CGTCTC 1 cut(s) 3187
FalI AAGNNNNNCTT 2 cut(s) 2503, 2535
FaqI GGGAC 3 cut(s) 670, 913, 958
FauI CCCGC 1 cut(s) 797
FauNDI CATATG 1 cut(s) 2128
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 1 cut(s) 1498
Fnu4HI GCNGC 4 cut(s) 135, 214, 250, 1018
FokI GGATG 4 cut(s) 44, 349, 422, 2281
Fsp4HI GCNGC 4 cut(s) 135, 214, 250, 1018
FspBI CTAG 7 cut(s) 1287, 1292, 1451, 1769, 1778, 1883, 2738
GlaI GCGC 3 cut(s) 744, 1241, 2342
GluI GCNGC 4 cut(s) 135, 214, 250, 1018
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 1 cut(s) 1213
HaeIII GGCC 7 cut(s) 606, 672, 1127, 1408, 2196, 2374, 2920
HapII CCGG 2 cut(s) 1029, 2786
HgaI GACGC 2 cut(s) 193, 2098
HhaI GCGC 3 cut(s) 745, 1242, 2343
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 3 cut(s) 743, 1240, 2341
HinP1I GCGC 3 cut(s) 743, 1240, 2341
HincII GTYRAC 4 cut(s) 843, 1141, 1603, 2218
HindII GTYRAC 4 cut(s) 843, 1141, 1603, 2218
HindIII AAGCTT 1 cut(s) 695
HpaI GTTAAC 1 cut(s) 843
HpaII CCGG 2 cut(s) 1029, 2786
HphI GGTGA 3 cut(s) 1018, 2429, 2587
Hpy166II GTNNAC 9 cut(s) 70, 532, 843, 999, 1141, 1499, 1603, 2218, 2561
Hpy8I GTNNAC 9 cut(s) 70, 532, 843, 999, 1141, 1499, 1603, 2218, 2561
HpyAV CCTTC 5 cut(s) 159, 1094, 1797, 2902, 2960
HpyCH4III ACNGT 2 cut(s) 784, 2947
HpyCH4IV ACGT 2 cut(s) 1438, 3196
HpyF10VI GCNNNNNNNGC 1 cut(s) 210
HpySE526I ACGT 2 cut(s) 1438, 3196
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 3 cut(s) 743, 1240, 2341
Ksp22I TGATCA 1 cut(s) 33
KspAI GTTAAC 1 cut(s) 843
LmnI GCTCC 2 cut(s) 111, 2788
Lsp1109I GCAGC 4 cut(s) 121, 225, 261, 1004
LweI GCATC 3 cut(s) 926, 1268, 2872
MaeI CTAG 7 cut(s) 1287, 1292, 1451, 1769, 1778, 1883, 2738
MaeII ACGT 2 cut(s) 1438, 3196
MaeIII GTNAC 6 cut(s) 205, 1742, 2545, 2723, 2900, 3057
MfeI CAATTG 4 cut(s) 655, 1064, 2601, 2837
MflI RGATCY 4 cut(s) 376, 1229, 1294, 1453
MhlI GDGCHC 1 cut(s) 2866
MlsI TGGCCA 1 cut(s) 2374
MluNI TGGCCA 1 cut(s) 2374
MlyI GAGTC 4 cut(s) 692, 1735, 2740, 2750
MmeI TCCRAC 3 cut(s) 1854, 1886, 2709
Mox20I TGGCCA 1 cut(s) 2374
Mph1103I ATGCAT 1 cut(s) 919
MroXI GAANNNNTTC 5 cut(s) 1516, 1657, 1901, 2271, 2974
MscI TGGCCA 1 cut(s) 2374
MslI CAYNNNNRTG 2 cut(s) 2275, 3171
Msp20I TGGCCA 1 cut(s) 2374
MspA1I CMGCKG 2 cut(s) 266, 3136
MspI CCGG 2 cut(s) 1029, 2786
MspR9I CCNGG 5 cut(s) 196, 753, 932, 2427, 2985
MunI CAATTG 4 cut(s) 655, 1064, 2601, 2837
Mva1269I GAATGC 2 cut(s) 178, 919
MvaI CCWGG 5 cut(s) 196, 753, 932, 2427, 2985
MwoI GCNNNNNNNGC 1 cut(s) 210
NdeI CATATG 1 cut(s) 2128
NlaIV GGNNCC 5 cut(s) 605, 641, 892, 1231, 2919
NmeAIII GCCGAG 1 cut(s) 632
NmuCI GTSAC 2 cut(s) 205, 3057
NsiI ATGCAT 1 cut(s) 919
NspI RCATGY 4 cut(s) 652, 3036, 3115, 3170
PaeR7I CTCGAG 2 cut(s) 680, 2755
PciI ACATGT 2 cut(s) 3032, 3166
PctI GAATGC 2 cut(s) 178, 919
PdmI GAANNNNTTC 5 cut(s) 1516, 1657, 1901, 2271, 2974
PflMI CCANNNNNTGG 1 cut(s) 1191
PfoI TCCNGGA 1 cut(s) 751
PkrI GCNGC 4 cut(s) 136, 215, 251, 1019
PleI GAGTC 4 cut(s) 691, 1734, 2739, 2749
PpsI GAGTC 4 cut(s) 691, 1734, 2739, 2749
PpuMI RGGWCCY 1 cut(s) 640
PscI ACATGT 2 cut(s) 3032, 3166
PsiI TTATAA 1 cut(s) 1089
Psp5II RGGWCCY 1 cut(s) 640
Psp6I CCWGG 5 cut(s) 194, 751, 930, 2425, 2983
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 5 cut(s) 194, 751, 930, 2425, 2983
PspN4I GGNNCC 5 cut(s) 605, 641, 892, 1231, 2919
PspPPI RGGWCCY 1 cut(s) 640
PsrI GAACNNNNNNTAC 2 cut(s) 1165, 1197
PstNI CAGNNNCTG 1 cut(s) 931
PsuI RGATCY 4 cut(s) 376, 1229, 1294, 1453
PvuII CAGCTG 2 cut(s) 266, 3136
RsaI GTAC 7 cut(s) 1174, 1804, 1814, 1924, 2379, 2424, 2509
RsaNI GTAC 7 cut(s) 1173, 1803, 1813, 1923, 2378, 2423, 2508
RseI CAYNNNNRTG 2 cut(s) 2275, 3171
Rsr2I CGGWCCG 1 cut(s) 1031
RsrII CGGWCCG 1 cut(s) 1031
SatI GCNGC 4 cut(s) 135, 214, 250, 1018
ScaI AGTACT 2 cut(s) 1804, 2379
SchI GAGTC 4 cut(s) 692, 1735, 2740, 2750
ScrFI CCNGG 5 cut(s) 196, 753, 932, 2427, 2985
SduI GDGCHC 1 cut(s) 2866
SfaNI GCATC 3 cut(s) 926, 1268, 2872
Sfr274I CTCGAG 2 cut(s) 680, 2755
SinI GGWCC 8 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2460, 2749
SlaI CTCGAG 2 cut(s) 680, 2755
SmiMI CAYNNNNRTG 2 cut(s) 2275, 3171
SmlI CTYRAG 9 cut(s) 388, 451, 680, 1606, 1648, 1891, 2021, 2728, 2755
SmoI CTYRAG 9 cut(s) 388, 451, 680, 1606, 1648, 1891, 2021, 2728, 2755
SsiI CCGC 5 cut(s) 326, 366, 804, 2772, 2859
SspMI CTAG 7 cut(s) 1287, 1292, 1451, 1769, 1778, 1883, 2738
StyD4I CCNGG 5 cut(s) 194, 751, 930, 2425, 2983
StyI CCWWGG 7 cut(s) 253, 502, 908, 1402, 2245, 2480, 2745
TaaI ACNGT 2 cut(s) 784, 2947
TaiI ACGT 2 cut(s) 1441, 3199
TaqI TCGA 5 cut(s) 681, 1079, 1919, 2568, 2756
TaqII GACCGA 3 cut(s) 134, 1048, 3140
TatI WGTACW 2 cut(s) 1802, 2377
TscAI CASTG 7 cut(s) 83, 601, 1196, 1876, 2075, 2182, 2952
TseFI GTSAC 2 cut(s) 205, 3057
TseI GCWGC 4 cut(s) 134, 213, 249, 1017
Tsp45I GTSAC 2 cut(s) 205, 3057
TspDTI ATGAA 8 cut(s) 17, 290, 1808, 1829, 2099, 2151, 2584, 2802
TspGWI ACGGA 2 cut(s) 1101, 2643
TspRI CASTG 7 cut(s) 83, 601, 1196, 1876, 2075, 2182, 2952
Van91I CCANNNNNTGG 1 cut(s) 1191
VpaK11BI GGWCC 8 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2460, 2749
XapI RAATTY 9 cut(s) 400, 429, 514, 902, 949, 970, 1332, 2138, 2330
XbaI TCTAGA 4 cut(s) 1291, 1450, 1777, 1882
XceI RCATGY 4 cut(s) 652, 3036, 3115, 3170
XcmI CCANNNNNNNNNTGG 1 cut(s) 2981
XhoI CTCGAG 2 cut(s) 680, 2755
XmiI GTMKAC 1 cut(s) 1498
XmnI GAANNNNTTC 5 cut(s) 1516, 1657, 1901, 2271, 2974
XspI CTAG 7 cut(s) 1287, 1292, 1451, 1769, 1778, 1883, 2738
ZrmI AGTACT 2 cut(s) 1804, 2379
Zsp2I ATGCAT 1 cut(s) 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.