MD05G1095400.v1.1

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
20155221 .. 20156144
924 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1095400.v1.1.491

Sequence Viewer

Length: 924 bp
ATGAAGCAGATATCCTCCTTGCGTGTCCTTGTTTTGCGATCCAACCGTTTTTATGGACATATGGGATGTAACAAAACCAGCGGTACCTGGCCAAACCTTCAAATTATTGACATAGCTCGCAACAATTTTACCGGCGAAATACCAGGAAGTTTTTTGAAAACGTGGAAAGCAATGATGGCTGACGAAGATGATGCCGAGTCAGAAGCTAATCACCTTCGATTTCAAGTTCTAAAGTTCAGCCAGCTATACTTTGAGGATGCTCTAACAGTTACCAATAAAGGTCTGGAAATGGAATTGGTAAAGATTCTAACTGTTTTCACCTACATTGACATCTCATGCAACAACTTTAGTGAATCAATACCTGCGGAGGTGGGAGAACTCAAATCCCTCCATGAGCTCAACTTGTCCAGCAATGCTCTCACAGGCACAATCCCACCATCATTAGGTAACCTACGACAACTTGAGTCGTTAGATCTTTCAAACAACAGCTTGAGCGGGCAAATTCCGGCGGAGTTTGGGGGCCTTACTTTCCTTTCTTTCCTGGATGTCTCAAACAATCAACTGGTCGGGAAGATACCAATCAGTACCCAGATTTCAATATTTCCAGCGGAGTCCTTCGCAGGCAATAAAGGATTATGTGGGCCACCTTCACTTCTAAAATGCAGTGATACCAACATGTCACCAACATTAGATGGCAAACATTCTAATTCTGCGCACGGAATTGATTGGGATCTGATTGGTGCTGAAATTGGATTTATTGTTGGCTTTGGGATTGCTACTGGATCACTTGTGTTTTGCAAGAGATGGAGTAAATGGTATTACAAAACAATGTATAAAATCCTTGTTAAGATATTCCCTCAGCTTGAAGATAGAATTGGTCATCACCGAAGACATGTCCACATAAATCAAAGGTTGGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

308

Amino Acids

34.17

Weight (kDa)

7.12

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 72 - 184 3.1e-08 Leucine-rich repeat region
LRR_8 PF13855 107 - 164 3e-08 Leucine rich repeat
LRR_4 PF12799 128 - 165 1e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 129 - 188 1.8e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 714
Acc36I ACCTGC 1 cut(s) 370
Acc65I GGTACC 1 cut(s) 83
AccB1I GGYRCC 1 cut(s) 83
AccBSI CCGCTC 1 cut(s) 495
AciI CCGC 5 cut(s) 81, 365, 495, 509, 608
AclWI GGATC 3 cut(s) 33, 738, 790
AcoI YGGCCR 1 cut(s) 89
AcsI RAATTY 1 cut(s) 501
AfaI GTAC 2 cut(s) 85, 586
AfiI CCNNNNNNNGG 1 cut(s) 443
AflIII ACRYGT 2 cut(s) 675, 892
AgsI TTSAA 6 cut(s) 101, 157, 224, 480, 597, 866
AjnI CCWGG 3 cut(s) 86, 142, 540
AjuI GAANNNNNNNTTGG 2 cut(s) 858, 890
AluBI AGCT 6 cut(s) 116, 206, 244, 397, 489, 862
AluI AGCT 6 cut(s) 116, 206, 244, 397, 489, 862
Alw21I GWGCWC 1 cut(s) 399
Alw26I GTCTC 1 cut(s) 553
AlwI GGATC 3 cut(s) 33, 738, 790
AoxI GGCC 3 cut(s) 89, 520, 641
ApoI RAATTY 1 cut(s) 501
Asp718I GGTACC 1 cut(s) 83
AspLEI GCGC 1 cut(s) 715
AspS9I GGNCC 2 cut(s) 520, 641
AsuHPI GGTGA 4 cut(s) 203, 310, 672, 875
BalI TGGCCA 1 cut(s) 91
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 399
BbsI GAAGAC 1 cut(s) 895
Bbv12I GWGCWC 1 cut(s) 399
BbvCI CCTCAGC 1 cut(s) 858
BccI CCATC 4 cut(s) 169, 445, 686, 798
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 3 cut(s) 88, 144, 542
BcoDI GTCTC 1 cut(s) 553
BfuAI ACCTGC 1 cut(s) 370
BglII AGATCT 1 cut(s) 472
Bme1390I CCNGG 3 cut(s) 88, 144, 542
BmgT120I GGNCC 2 cut(s) 520, 641
BmiI GGNNCC 2 cut(s) 85, 521
BmrFI CCNGG 3 cut(s) 88, 144, 542
BmsI GCATC 2 cut(s) 181, 247
BpiI GAAGAC 1 cut(s) 895
Bpu10I CCTNAGC 1 cut(s) 858
BpuEI CTTGAG 2 cut(s) 482, 511
BsaBI GATNNNNATC 2 cut(s) 578, 729
Bsc4I CCNNNNNNNGG 1 cut(s) 443
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 2 cut(s) 567, 784
Bse3DI GCAATG 2 cut(s) 177, 418
Bse8I GATNNNNATC 2 cut(s) 578, 729
BseBI CCWGG 3 cut(s) 88, 144, 542
BseGI GGATG 3 cut(s) 71, 262, 550
BseJI GATNNNNATC 2 cut(s) 578, 729
BseLI CCNNNNNNNGG 1 cut(s) 443
BseMI GCAATG 2 cut(s) 177, 418
BseMII CTCAG 1 cut(s) 872
BseNI ACTGG 2 cut(s) 567, 784
BshFI GGCC 3 cut(s) 91, 522, 643
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 399
BsiSI CCGG 2 cut(s) 132, 506
BslI CCNNNNNNNGG 1 cut(s) 443
BsmAI GTCTC 1 cut(s) 553
BsnI GGCC 3 cut(s) 91, 522, 643
Bsp1286I GDGCHC 1 cut(s) 399
Bsp143I GATC 4 cut(s) 38, 472, 730, 782
BspACI CCGC 5 cut(s) 81, 365, 495, 509, 608
BspANI GGCC 3 cut(s) 91, 522, 643
BspCNI CTCAG 1 cut(s) 871
BspLI GGNNCC 2 cut(s) 85, 521
BspMI ACCTGC 1 cut(s) 370
BspPI GGATC 3 cut(s) 33, 738, 790
BspT107I GGYRCC 1 cut(s) 83
BsrBI CCGCTC 1 cut(s) 495
BsrDI GCAATG 2 cut(s) 177, 418
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 2 cut(s) 567, 784
BssAI RCCGGY 1 cut(s) 131
BssMI GATC 4 cut(s) 38, 472, 730, 782
Bst2UI CCWGG 3 cut(s) 88, 144, 542
Bst4CI ACNGT 3 cut(s) 47, 268, 313
BstC8I GCNNGC 4 cut(s) 118, 242, 497, 622
BstDEI CTNAG 1 cut(s) 858
BstEII GGTNACC 1 cut(s) 446
BstF5I GGATG 3 cut(s) 71, 262, 550
BstHHI GCGC 1 cut(s) 715
BstKTI GATC 4 cut(s) 41, 475, 733, 785
BstMAI GTCTC 1 cut(s) 553
BstMBI GATC 4 cut(s) 38, 472, 730, 782
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstNI CCWGG 3 cut(s) 88, 144, 542
BstNSI RCATGY 2 cut(s) 679, 896
BstPI GGTNACC 1 cut(s) 446
BstSCI CCNGG 3 cut(s) 86, 142, 540
BstV2I GAAGAC 1 cut(s) 895
BstX2I RGATCY 2 cut(s) 472, 730
BstYI RGATCY 2 cut(s) 472, 730
BsuRI GGCC 3 cut(s) 91, 522, 643
BtsCI GGATG 3 cut(s) 71, 262, 550
BtsI GCAGTG 1 cut(s) 670
BtsIMutI CAGTG 1 cut(s) 670
BveI ACCTGC 1 cut(s) 370
Cac8I GCNNGC 4 cut(s) 118, 242, 497, 622
CfoI GCGC 1 cut(s) 715
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 2 cut(s) 520, 641
Csp6I GTAC 2 cut(s) 84, 585
CviAII CATG 4 cut(s) 336, 392, 676, 893
CviQI GTAC 2 cut(s) 84, 585
DdeI CTNAG 1 cut(s) 858
DpnI GATC 4 cut(s) 40, 474, 732, 784
DpnII GATC 4 cut(s) 38, 472, 730, 782
EaeI YGGCCR 1 cut(s) 89
EciI GGCGGA 1 cut(s) 524
Ecl136II GAGCTC 1 cut(s) 397
Eco24I GRGCYC 1 cut(s) 399
Eco32I GATATC 1 cut(s) 12
Eco53kI GAGCTC 1 cut(s) 397
Eco91I GGTNACC 1 cut(s) 446
EcoICRI GAGCTC 1 cut(s) 397
EcoO109I RGGNCCY 1 cut(s) 520
EcoO65I GGTNACC 1 cut(s) 446
EcoRII CCWGG 3 cut(s) 86, 142, 540
EcoRV GATATC 1 cut(s) 12
EcoT38I GRGCYC 1 cut(s) 399
FaeI CATG 4 cut(s) 339, 395, 679, 896
FatI CATG 4 cut(s) 335, 391, 675, 892
FauI CCCGC 1 cut(s) 488
FauNDI CATATG 1 cut(s) 60
FokI GGATG 3 cut(s) 78, 269, 557
FriOI GRGCYC 1 cut(s) 399
FspI TGCGCA 1 cut(s) 714
GlaI GCGC 1 cut(s) 714
HaeIII GGCC 3 cut(s) 91, 522, 643
HapII CCGG 2 cut(s) 132, 506
HhaI GCGC 1 cut(s) 715
Hin1II CATG 4 cut(s) 339, 395, 679, 896
Hin6I GCGC 1 cut(s) 713
HinP1I GCGC 1 cut(s) 713
HinfI GANTC 5 cut(s) 197, 304, 353, 464, 611
HpaII CCGG 2 cut(s) 132, 506
HphI GGTGA 4 cut(s) 203, 310, 672, 875
Hpy166II GTNNAC 1 cut(s) 898
Hpy188I TCNGA 2 cut(s) 202, 735
Hpy188III TCNNGA 2 cut(s) 284, 568
Hpy8I GTNNAC 1 cut(s) 898
HpyAV CCTTC 4 cut(s) 107, 224, 625, 657
HpyCH4III ACNGT 3 cut(s) 47, 268, 313
HpyCH4IV ACGT 1 cut(s) 161
HpyCH4V TGCA 3 cut(s) 339, 663, 798
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpyF3I CTNAG 1 cut(s) 858
HpySE526I ACGT 1 cut(s) 161
Hsp92II CATG 4 cut(s) 339, 395, 679, 896
HspAI GCGC 1 cut(s) 713
KpnI GGTACC 1 cut(s) 87
Kzo9I GATC 4 cut(s) 38, 472, 730, 782
LweI GCATC 2 cut(s) 181, 247
MaeII ACGT 1 cut(s) 161
MaeIII GTNAC 4 cut(s) 68, 268, 446, 678
MalI GATC 4 cut(s) 40, 474, 732, 784
MbiI CCGCTC 1 cut(s) 495
MboI GATC 4 cut(s) 38, 472, 730, 782
MboII GAAGA 4 cut(s) 197, 583, 878, 900
MflI RGATCY 2 cut(s) 472, 730
MhlI GDGCHC 1 cut(s) 399
MlsI TGGCCA 1 cut(s) 91
MluCI AATT 8 cut(s) 102, 124, 293, 501, 706, 720, 747, 873
MluNI TGGCCA 1 cut(s) 91
MlyI GAGTC 3 cut(s) 206, 473, 620
MmeI TCCRAC 1 cut(s) 66
MnlI CCTC 5 cut(s) 25, 247, 361, 398, 867
Mox20I TGGCCA 1 cut(s) 91
MscI TGGCCA 1 cut(s) 91
MseI TTAA 1 cut(s) 846
Msp20I TGGCCA 1 cut(s) 91
MspA1I CMGCKG 2 cut(s) 81, 608
MspI CCGG 2 cut(s) 132, 506
MspR9I CCNGG 3 cut(s) 88, 144, 542
MvaI CCWGG 3 cut(s) 88, 144, 542
MwoI GCNNNNNNNGC 1 cut(s) 176
NdeI CATATG 1 cut(s) 60
NdeII GATC 4 cut(s) 38, 472, 730, 782
NlaIII CATG 4 cut(s) 339, 395, 679, 896
NlaIV GGNNCC 2 cut(s) 85, 521
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 1 cut(s) 678
NsbI TGCGCA 1 cut(s) 714
NspI RCATGY 2 cut(s) 679, 896
PciI ACATGT 2 cut(s) 675, 892
PfeI GAWTC 2 cut(s) 304, 353
PfoI TCCNGGA 1 cut(s) 540
PleI GAGTC 3 cut(s) 205, 472, 619
PpsI GAGTC 3 cut(s) 205, 472, 619
PscI ACATGT 2 cut(s) 675, 892
Psp124BI GAGCTC 1 cut(s) 399
Psp6I CCWGG 3 cut(s) 86, 142, 540
PspEI GGTNACC 1 cut(s) 446
PspGI CCWGG 3 cut(s) 86, 142, 540
PspN4I GGNNCC 2 cut(s) 85, 521
PspPI GGNCC 2 cut(s) 520, 641
PsuI RGATCY 2 cut(s) 472, 730
RsaI GTAC 2 cut(s) 85, 586
RsaNI GTAC 2 cut(s) 84, 585
SacI GAGCTC 1 cut(s) 399
SaqAI TTAA 1 cut(s) 846
Sau3AI GATC 4 cut(s) 38, 472, 730, 782
Sau96I GGNCC 2 cut(s) 520, 641
SchI GAGTC 3 cut(s) 206, 473, 620
ScrFI CCNGG 3 cut(s) 88, 144, 542
SduI GDGCHC 1 cut(s) 399
SfaNI GCATC 2 cut(s) 181, 247
SmlI CTYRAG 2 cut(s) 461, 490
SmoI CTYRAG 2 cut(s) 461, 490
Sse9I AATT 8 cut(s) 102, 124, 293, 501, 706, 720, 747, 873
SsiI CCGC 5 cut(s) 81, 365, 495, 509, 608
SspI AATATT 1 cut(s) 600
SstI GAGCTC 1 cut(s) 399
StyD4I CCNGG 3 cut(s) 86, 142, 540
TaaI ACNGT 3 cut(s) 47, 268, 313
TaiI ACGT 1 cut(s) 164
TaqI TCGA 1 cut(s) 217
TasI AATT 8 cut(s) 102, 124, 293, 501, 706, 720, 747, 873
TfiI GAWTC 2 cut(s) 304, 353
Tru1I TTAA 1 cut(s) 846
Tru9I TTAA 1 cut(s) 846
TscAI CASTG 1 cut(s) 670
TseFI GTSAC 1 cut(s) 678
Tsp45I GTSAC 1 cut(s) 678
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 732
TspRI CASTG 1 cut(s) 670
XapI RAATTY 1 cut(s) 501
XceI RCATGY 2 cut(s) 679, 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.