RLG00000023661

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
26826285 .. 26830512
4228 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023661

Sequence Viewer

Length: 2169 bp
ATGAAATCATCATACGGCACTAATGGGTATGTCATCGGACTTGACCTCAGCAGCGAGTTTGTTTCATGCAGAATTGACAATTCCAGCAGTCTCTTCCAACTTCAACATCTTGAGAGCCTCAATTTGGCCAATAATGTCTTCAATGGCTCTCGAATTCCATCTGCAATCGGAGAGCTTACAAATCTGAGGTATCTAAATTTAGCTAGTGGTTTCTATTCCGGGCAAATTCCCATTGAGATTTCACGCTTGACTAGGTTGATTGAGAACTTGCTGTTGGCTTCTAACAAGTTGGTAGGACTCCCAGATTTTTTAAAAAATCAATCCAGACTTTGGCAATTAGACCTTTCGGGAAACCAGATTCAAGGCCAGATACCTAATTGGATTTGGAGGCTCAATTCTCTTGGACTCCTAAATCTCTCTTATAACTCCATTGTAAATCTAGAACCCCTTCTTCCTAATTCTACTTTTACTTTATTTACTCTTGACCTTAATTCCAACAAGATTCAGGGTATCCACTCCTCATATGCCTTCCTTCAGATTGGCCACTTGGGTTTAGCTTCTAACAAGTTGAGAACATTCCCAGACTTCTTGAGAAATCAGTCCACATTAAATTACTTGGACCTTTCAAACAACCAAATTCAAGGCCAGATACCCAATTGGATTTGGAGGCTCAATTCTCTTCAAGAACTGAATCTTTCTTGTAACTCCTTGGAAACTCTAGAAGCTCCTTTACCTAAGGCTAATTCTTCTACTGTTGTGACGTCACTTGATCTTCATTCAAACCAGCTTCAGGGACAAATCCCATTGTTCCTACCATTTGCCCATTTTCTGGATTACTCGAGAAATAATTTTAGCTCTAGTCTACCGACTGACATTGGCAGTTTTATCTCTCGAACTAATTTCCTCTCTCTGTCAAGCAATAACTTGCATGGAACCATTCCAAGATCAATTTGCAATGCAACTGGTATGGTTCTAGATCTGTCCTATAATTCTTTGAGTGGTATAATTCCGCAATGCTTGACTCAACTTTCGCTTTCAGTCCTTGATTTAAGGACAAACAACCTCACTGGCTCTATTCCTGATAATTTTCTTGAGCATTGTAAGCTACAAACTTTTGATCTCAGCAGAAATAATATACAAGGCCAATTTCCGAAATCTCTTGTCAACTGCTCAAGTTTAGGGGTTTTAAATCTAGGAAACAATCAGATAACAGATACTTTTCCGTGCCTTTTGATGAGCATATCCACCTTGCGTGTCCTTGTTTTAAGATCCAACAATCTTTATGGTAGCCTAGGATGTCCCAAGACCAACAGCACGTGGCCTGTGCTGCAAATCATAGATTTAGCACACAACCATTTGAATGGTGAAATACCGGCAACGTCTTTTGCAACATGGCAGAAAATGAAGGCTAATGAAGATGATGGTAATCTGGTATTTTCGTACACTCCCCTGTACACAACAGAGACTATTGGGATGGATGTTTACTACAGAGATACAATCACAACCATCATCAAAGGTTTGCAGTTGGATCTGATAAAGATTCTAACTATCTTCACCTTGATTGATTTCTCTTCCAACAATTTTAGCGGGTCAATACCCAAGGAAATTGGAGAGCTGAAAGCATTGTATGCCCTCAACTTATCTGGTAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGTAGCATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGCGGCCAAATTCCACCGCAGCTTTCAACTCTCACTTTCCTTTCGCACTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAGCACTCAGTTTTCAACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATGGGATACAACAATCATATTGCCACCTCCAACGTTTAATGGAAGCTCAAGTAATCCGAATTCTGGAGATGAGATTGATTGGGATATCATCAGTGTTGAAATTGGATTTACATGTGGATTTGGGATTGCCATCGGATCGCTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAACATCCTGTTTAAGACATTCCCTCAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGCTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

723

Amino Acids

80.71

Weight (kDa)

6.92

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 20 - 139 1.7e-06 Leucine-rich repeat region
LRR_8 PF13855 87 - 144 3.8e-06 Leucine rich repeat
LRR_8 PF13855 183 - 237 2.7e-07 Leucine rich repeat
LRR_8 PF13855 368 - 427 2.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AatII GACGTC 1 cut(s) 764
AccB7I CCANNNNNTGG 2 cut(s) 330, 829
AccBSI CCGCTC 1 cut(s) 1731
AccI GTMKAC 1 cut(s) 862
AciI CCGC 4 cut(s) 1010, 1587, 1731, 1745
AclI AACGTT 1 cut(s) 1922
AclWI GGATC 5 cut(s) 1263, 1536, 1804, 1817, 2032
AcoI YGGCCR 3 cut(s) 126, 541, 1732
AcsI RAATTY 6 cut(s) 153, 196, 225, 636, 1737, 1948
AcuI CTGAAG 2 cut(s) 518, 773
AcvI CACGTG 1 cut(s) 1317
AcyI GRCGYC 1 cut(s) 761
AfaI GTAC 2 cut(s) 1442, 1454
AfiI CCNNNNNNNGG 6 cut(s) 124, 330, 790, 829, 1952, 2104
AflIII ACRYGT 1 cut(s) 2000
AjuI GAANNNNNNNTTGG 6 cut(s) 122, 154, 257, 289, 2100, 2132
Alw26I GTCTC 4 cut(s) 95, 1457, 1789, 2155
AlwI GGATC 5 cut(s) 1263, 1536, 1804, 1817, 2032
Ama87I CYCGRG 1 cut(s) 838
AoxI GGCC 8 cut(s) 126, 364, 541, 643, 1141, 1319, 1732, 1877
ApeKI GCWGC 3 cut(s) 51, 1327, 1747
ApoI RAATTY 6 cut(s) 153, 196, 225, 636, 1737, 1948
ArsI GACNNNNNNTTYG 2 cut(s) 1012, 1044
Asp700I GAANNNNTTC 1 cut(s) 447
AspA2I CCTAGG 1 cut(s) 1291
AspS9I GGNCC 2 cut(s) 619, 1877
AsuC2I CCSGG 1 cut(s) 220
AsuHPI GGTGA 2 cut(s) 1376, 1546
AvaI CYCGRG 1 cut(s) 838
AvaII GGWCC 1 cut(s) 619
AvrII CCTAGG 1 cut(s) 1291
AxyI CCTNAGG 1 cut(s) 735
BalI TGGCCA 2 cut(s) 128, 543
BamHI GGATCC 1 cut(s) 1809
BarI GAAGNNNNNNTAC 2 cut(s) 714, 746
BbrPI CACGTG 1 cut(s) 1317
BbsI GAAGAC 1 cut(s) 130
BbvCI CCTCAGC 2 cut(s) 47, 2100
BbvI GCAGC 3 cut(s) 63, 1314, 1759
BccI CCATC 7 cut(s) 166, 1415, 1468, 1514, 1678, 2027, 2040
BceAI ACGGC 1 cut(s) 31
BciVI GTATCC 2 cut(s) 521, 1888
BcnI CCSGG 1 cut(s) 220
BcoDI GTCTC 4 cut(s) 95, 1457, 1789, 2155
BfaI CTAG 8 cut(s) 204, 252, 440, 719, 858, 974, 1193, 1292
BfmI CTRYAG 1 cut(s) 1486
BfuI GTATCC 2 cut(s) 521, 1888
BglII AGATCT 1 cut(s) 976
BisI GCNGC 4 cut(s) 52, 1328, 1732, 1748
BlnI CCTAGG 1 cut(s) 1291
BlsI GCNGC 4 cut(s) 53, 1329, 1733, 1749
Bme1390I CCNGG 1 cut(s) 220
Bme18I GGWCC 1 cut(s) 619
BmeT110I CYCGRG 1 cut(s) 838
BmgT120I GGNCC 2 cut(s) 619, 1877
BmiI GGNNCC 3 cut(s) 934, 1811, 1878
BmrFI CCNGG 1 cut(s) 220
BpiI GAAGAC 1 cut(s) 130
BpmI CTGGAG 1 cut(s) 1974
Bpu10I CCTNAGC 3 cut(s) 47, 1727, 2100
BpuEI CTTGAG 5 cut(s) 131, 610, 1112, 1156, 1921
BpuMI CCSGG 1 cut(s) 220
BsaAI YACGTR 1 cut(s) 1317
BsaBI GATNNNNATC 2 cut(s) 1425, 2018
BsaHI GRCGYC 1 cut(s) 761
BsaJI CCNNGG 3 cut(s) 708, 1291, 1599
Bsc4I CCNNNNNNNGG 6 cut(s) 124, 330, 790, 829, 1952, 2104
Bse118I RCCGGY 1 cut(s) 1372
Bse1I ACTGG 2 cut(s) 967, 1072
Bse21I CCTNAGG 1 cut(s) 735
Bse3DI GCAATG 2 cut(s) 961, 1019
Bse8I GATNNNNATC 2 cut(s) 1425, 2018
BseDI CCNNGG 3 cut(s) 708, 1291, 1599
BseGI GGATG 5 cut(s) 1301, 1479, 1483, 1673, 2079
BseJI GATNNNNATC 2 cut(s) 1425, 2018
BseLI CCNNNNNNNGG 6 cut(s) 124, 330, 790, 829, 1952, 2104
BseMI GCAATG 2 cut(s) 961, 1019
BseMII CTCAG 6 cut(s) 61, 176, 1135, 1718, 1838, 2114
BseNI ACTGG 2 cut(s) 967, 1072
BseRI GAGGAG 2 cut(s) 508, 1872
BseXI GCAGC 3 cut(s) 63, 1314, 1759
BshFI GGCC 8 cut(s) 128, 366, 543, 645, 1143, 1321, 1734, 1879
BsiHKCI CYCGRG 1 cut(s) 838
BsiSI CCGG 2 cut(s) 219, 1373
BslFI GGGAC 2 cut(s) 807, 1284
BslI CCNNNNNNNGG 6 cut(s) 124, 330, 790, 829, 1952, 2104
BsmAI GTCTC 4 cut(s) 95, 1457, 1789, 2155
BsmBI CGTCTC 1 cut(s) 2155
BsmFI GGGAC 2 cut(s) 807, 1284
BsnI GGCC 8 cut(s) 128, 366, 543, 645, 1143, 1321, 1734, 1879
BsoBI CYCGRG 1 cut(s) 838
Bsp1407I TGTACA 1 cut(s) 1452
Bsp143I GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
BspACI CCGC 4 cut(s) 1010, 1587, 1731, 1745
BspANI GGCC 8 cut(s) 128, 366, 543, 645, 1143, 1321, 1734, 1879
BspCNI CTCAG 6 cut(s) 60, 177, 1134, 1719, 1837, 2113
BspLI GGNNCC 3 cut(s) 934, 1811, 1878
BspPI GGATC 5 cut(s) 1263, 1536, 1804, 1817, 2032
BsrBI CCGCTC 1 cut(s) 1731
BsrDI GCAATG 2 cut(s) 961, 1019
BsrFI RCCGGY 1 cut(s) 1372
BsrGI TGTACA 1 cut(s) 1452
BsrI ACTGG 2 cut(s) 967, 1072
BssAI RCCGGY 1 cut(s) 1372
BssECI CCNNGG 3 cut(s) 708, 1291, 1599
BssMI GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
BssNI GRCGYC 1 cut(s) 761
BssT1I CCWWGG 3 cut(s) 708, 1291, 1599
Bst4CI ACNGT 1 cut(s) 754
Bst6I CTCTTC 3 cut(s) 98, 684, 1576
BstACI GRCGYC 1 cut(s) 761
BstAPI GCANNNNNTGC 1 cut(s) 1628
BstAUI TGTACA 1 cut(s) 1452
BstBAI YACGTR 1 cut(s) 1317
BstC8I GCNNGC 1 cut(s) 2136
BstDEI CTNAG 8 cut(s) 47, 185, 735, 1121, 1705, 1727, 1824, 2100
BstF5I GGATG 5 cut(s) 1301, 1479, 1483, 1673, 2079
BstKTI GATC 8 cut(s) 772, 947, 979, 1120, 1271, 1531, 1812, 2027
BstMAI GTCTC 4 cut(s) 95, 1457, 1789, 2155
BstMBI GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
BstMWI GCNNNNNNNGC 3 cut(s) 1102, 1327, 1628
BstNSI RCATGY 2 cut(s) 2004, 2138
BstSCI CCNGG 1 cut(s) 218
BstSFI CTRYAG 1 cut(s) 1486
BstV1I GCAGC 3 cut(s) 63, 1314, 1759
BstV2I GAAGAC 1 cut(s) 130
BstX2I RGATCY 4 cut(s) 976, 1268, 1528, 1809
BstXI CCANNNNNNTGG 1 cut(s) 1361
BstYI RGATCY 4 cut(s) 976, 1268, 1528, 1809
Bsu36I CCTNAGG 1 cut(s) 735
BsuI GTATCC 2 cut(s) 521, 1888
BsuRI GGCC 8 cut(s) 128, 366, 543, 645, 1143, 1321, 1734, 1879
BtsCI GGATG 5 cut(s) 1301, 1479, 1483, 1673, 2079
BtsIMutI CAGTG 2 cut(s) 1065, 1987
Cac8I GCNNGC 1 cut(s) 2136
Cfr10I RCCGGY 1 cut(s) 1372
Cfr13I GGNCC 2 cut(s) 619, 1877
Csp6I GTAC 2 cut(s) 1441, 1453
CviAII CATG 7 cut(s) 66, 929, 1392, 1687, 1890, 2001, 2135
CviQI GTAC 2 cut(s) 1441, 1453
DdeI CTNAG 8 cut(s) 47, 185, 735, 1121, 1705, 1727, 1824, 2100
DpnI GATC 8 cut(s) 771, 946, 978, 1119, 1270, 1530, 1811, 2026
DpnII GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
DraI TTTAAA 2 cut(s) 312, 1188
EaeI YGGCCR 3 cut(s) 126, 541, 1732
Eam1104I CTCTTC 3 cut(s) 98, 684, 1576
EarI CTCTTC 3 cut(s) 98, 684, 1576
Eco130I CCWWGG 3 cut(s) 708, 1291, 1599
Eco32I GATATC 1 cut(s) 1975
Eco47I GGWCC 1 cut(s) 619
Eco57I CTGAAG 2 cut(s) 518, 773
Eco72I CACGTG 1 cut(s) 1317
Eco81I CCTNAGG 1 cut(s) 735
Eco88I CYCGRG 1 cut(s) 838
EcoO109I RGGNCCY 1 cut(s) 1877
EcoRI GAATTC 2 cut(s) 153, 1948
EcoRV GATATC 1 cut(s) 1975
EcoT14I CCWWGG 3 cut(s) 708, 1291, 1599
ErhI CCWWGG 3 cut(s) 708, 1291, 1599
Esp3I CGTCTC 1 cut(s) 2155
FaeI CATG 7 cut(s) 69, 932, 1395, 1690, 1893, 2004, 2138
FalI AAGNNNNNCTT 2 cut(s) 2122, 2154
FaqI GGGAC 2 cut(s) 807, 1284
FatI CATG 7 cut(s) 65, 928, 1391, 1686, 1889, 2000, 2134
FauI CCCGC 1 cut(s) 1580
FauNDI CATATG 1 cut(s) 523
FblI GTMKAC 1 cut(s) 862
Fnu4HI GCNGC 4 cut(s) 52, 1328, 1732, 1748
FokI GGATG 5 cut(s) 1308, 1486, 1490, 1660, 2066
Fsp4HI GCNGC 4 cut(s) 52, 1328, 1732, 1748
FspBI CTAG 8 cut(s) 204, 252, 440, 719, 858, 974, 1193, 1292
GluI GCNGC 4 cut(s) 52, 1328, 1732, 1748
GsuI CTGGAG 1 cut(s) 1974
HaeIII GGCC 8 cut(s) 128, 366, 543, 645, 1143, 1321, 1734, 1879
HapII CCGG 2 cut(s) 219, 1373
Hin1I GRCGYC 1 cut(s) 761
Hin1II CATG 7 cut(s) 69, 932, 1395, 1690, 1893, 2004, 2138
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HinfI GANTC 8 cut(s) 297, 358, 405, 502, 691, 1021, 1540, 1700
HpaII CCGG 2 cut(s) 219, 1373
HphI GGTGA 2 cut(s) 1376, 1546
Hpy166II GTNNAC 6 cut(s) 603, 863, 1165, 1443, 1455, 1483
Hpy8I GTNNAC 6 cut(s) 603, 863, 1165, 1443, 1455, 1483
HpyAV CCTTC 7 cut(s) 458, 538, 542, 1399, 1800, 1861, 2124
HpyCH4III ACNGT 1 cut(s) 754
HpyCH4IV ACGT 5 cut(s) 761, 1316, 1379, 1922, 2164
HpyCH4V TGCA 9 cut(s) 69, 164, 928, 954, 959, 1330, 1388, 1522, 2040
HpyF10VI GCNNNNNNNGC 3 cut(s) 1102, 1327, 1628
HpyF3I CTNAG 8 cut(s) 47, 185, 735, 1121, 1705, 1727, 1824, 2100
HpySE526I ACGT 5 cut(s) 761, 1316, 1379, 1922, 2164
Hsp92I GRCGYC 1 cut(s) 761
Hsp92II CATG 7 cut(s) 69, 932, 1395, 1690, 1893, 2004, 2138
Kzo9I GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
LmnI GCTCC 1 cut(s) 730
Lsp1109I GCAGC 3 cut(s) 63, 1314, 1759
MaeI CTAG 8 cut(s) 204, 252, 440, 719, 858, 974, 1193, 1292
MaeII ACGT 5 cut(s) 761, 1316, 1379, 1922, 2164
MaeIII GTNAC 5 cut(s) 701, 757, 762, 1682, 1859
MalI GATC 8 cut(s) 771, 946, 978, 1119, 1270, 1530, 1811, 2026
MbiI CCGCTC 1 cut(s) 1731
MboI GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
MboII GAAGA 9 cut(s) 85, 130, 443, 671, 738, 764, 1427, 1543, 1563
MfeI CAATTG 1 cut(s) 655
MflI RGATCY 4 cut(s) 976, 1268, 1528, 1809
MlsI TGGCCA 2 cut(s) 128, 543
MluNI TGGCCA 2 cut(s) 128, 543
MlyI GAGTC 4 cut(s) 291, 399, 1015, 1709
MmeI TCCRAC 6 cut(s) 121, 519, 1296, 1506, 1599, 1943
Mox20I TGGCCA 2 cut(s) 128, 543
MroXI GAANNNNTTC 1 cut(s) 447
MscI TGGCCA 2 cut(s) 128, 543
MseI TTAA 9 cut(s) 311, 489, 608, 1049, 1187, 1265, 1926, 2076, 2088
MslI CAYNNNNRTG 2 cut(s) 1359, 1779
Msp20I TGGCCA 2 cut(s) 128, 543
MspA1I CMGCKG 1 cut(s) 2104
MspI CCGG 2 cut(s) 219, 1373
MspR9I CCNGG 1 cut(s) 220
MunI CAATTG 1 cut(s) 655
MwoI GCNNNNNNNGC 3 cut(s) 1102, 1327, 1628
NciI CCSGG 1 cut(s) 220
NdeI CATATG 1 cut(s) 523
NdeII GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
NlaIII CATG 7 cut(s) 69, 932, 1395, 1690, 1893, 2004, 2138
NlaIV GGNNCC 3 cut(s) 934, 1811, 1878
NmuCI GTSAC 2 cut(s) 757, 762
NspI RCATGY 2 cut(s) 2004, 2138
PaeI GCATGC 1 cut(s) 2138
PaeR7I CTCGAG 1 cut(s) 838
PciI ACATGT 1 cut(s) 2000
PdmI GAANNNNTTC 1 cut(s) 447
PfeI GAWTC 4 cut(s) 358, 502, 691, 1540
PflMI CCANNNNNTGG 2 cut(s) 330, 829
PkrI GCNGC 4 cut(s) 53, 1329, 1733, 1749
PleI GAGTC 4 cut(s) 291, 399, 1015, 1708
PmaCI CACGTG 1 cut(s) 1317
PmlI CACGTG 1 cut(s) 1317
PpsI GAGTC 4 cut(s) 291, 399, 1015, 1708
Ppu21I YACGTR 1 cut(s) 1317
PscI ACATGT 1 cut(s) 2000
PsiI TTATAA 1 cut(s) 423
Psp1406I AACGTT 1 cut(s) 1922
PspCI CACGTG 1 cut(s) 1317
PspN4I GGNNCC 3 cut(s) 934, 1811, 1878
PspPI GGNCC 2 cut(s) 619, 1877
PsuI RGATCY 4 cut(s) 976, 1268, 1528, 1809
PvuII CAGCTG 1 cut(s) 2104
RsaI GTAC 2 cut(s) 1442, 1454
RsaNI GTAC 2 cut(s) 1441, 1453
RseI CAYNNNNRTG 2 cut(s) 1359, 1779
SaqAI TTAA 9 cut(s) 311, 489, 608, 1049, 1187, 1265, 1926, 2076, 2088
SatI GCNGC 4 cut(s) 52, 1328, 1732, 1748
Sau3AI GATC 8 cut(s) 769, 944, 976, 1117, 1268, 1528, 1809, 2024
Sau96I GGNCC 2 cut(s) 619, 1877
SchI GAGTC 4 cut(s) 291, 399, 1015, 1709
ScrFI CCNGG 1 cut(s) 220
SfcI CTRYAG 1 cut(s) 1486
Sfr274I CTCGAG 1 cut(s) 838
SinI GGWCC 1 cut(s) 619
SlaI CTCGAG 1 cut(s) 838
SmiMI CAYNNNNRTG 2 cut(s) 1359, 1779
SmlI CTYRAG 6 cut(s) 110, 589, 838, 1091, 1171, 1936
SmoI CTYRAG 6 cut(s) 110, 589, 838, 1091, 1171, 1936
SphI GCATGC 1 cut(s) 2138
SsiI CCGC 4 cut(s) 1010, 1587, 1731, 1745
SspMI CTAG 8 cut(s) 204, 252, 440, 719, 858, 974, 1193, 1292
StyD4I CCNGG 1 cut(s) 218
StyI CCWWGG 3 cut(s) 708, 1291, 1599
TaaI ACNGT 1 cut(s) 754
TaiI ACGT 5 cut(s) 764, 1319, 1382, 1925, 2167
TaqI TCGA 4 cut(s) 151, 839, 892, 1854
TatI WGTACW 1 cut(s) 1452
TauI GCSGC 1 cut(s) 1734
TfiI GAWTC 4 cut(s) 358, 502, 691, 1540
Tru1I TTAA 9 cut(s) 311, 489, 608, 1049, 1187, 1265, 1926, 2076, 2088
Tru9I TTAA 9 cut(s) 311, 489, 608, 1049, 1187, 1265, 1926, 2076, 2088
TscAI CASTG 2 cut(s) 1072, 1987
TseFI GTSAC 2 cut(s) 757, 762
TseI GCWGC 3 cut(s) 51, 1327, 1747
Tsp45I GTSAC 2 cut(s) 757, 762
TspDTI ATGAA 5 cut(s) 17, 54, 764, 1418, 1428
TspGWI ACGGA 1 cut(s) 1212
TspRI CASTG 2 cut(s) 1072, 1987
Van91I CCANNNNNTGG 2 cut(s) 330, 829
VpaK11BI GGWCC 1 cut(s) 619
XapI RAATTY 6 cut(s) 153, 196, 225, 636, 1737, 1948
XbaI TCTAGA 3 cut(s) 439, 718, 973
XceI RCATGY 2 cut(s) 2004, 2138
XhoI CTCGAG 1 cut(s) 838
XmaJI CCTAGG 1 cut(s) 1291
XmiI GTMKAC 1 cut(s) 862
XmnI GAANNNNTTC 1 cut(s) 447
XspI CTAG 8 cut(s) 204, 252, 440, 719, 858, 974, 1193, 1292
ZraI GACGTC 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.