Rh5DG280900

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
34452491 .. 34455304
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG280900.1

Sequence Viewer

Length: 1461 bp
ATGAGGGTGCTGAGCTTGTATGCTTGTGATCTTTCAGGCCCTATTCATGACTCAGTTGCTAAGCTTCATTCTCTATCTGTGATTATATTGGATCATAACCAAATCTCTGCTCCAGTTCCAGGATTCTTTGCCAATTTTTCAAACTTGACTTACTTAAGTCTTGTTGATTGTGGGTTGCAAGGAACATTTCCCAAAGAGATATTCCAGTTATCTACATTACAGAGTATTGACCTGACATTAAATCCACAGCTTCAAGGTTCCTTGCCAGAGTTACCCGAAAATGGATCTCTTCAGTCCTTGGTTCTAAGCCAGACAAATTTTTCAGGGGTCCTGCCAAACTCTATAGGTAACCTCAATATGCTCTCTAGAATGGATCTTTCAGTTTGTAGCTTCAGTGGATCAATCCCAAAGTCAGTGGCAAACCTAACACAGTTGGTGAGTTTGTCTATGTCATCAAATAGGTTTGATGGCTCCATTGCTTCTATTCAGTGGAAAAACCTTGTTAATCTGAACTTTTTCATGTTGGACTCCAATCTACTTTCTGGGACTATTCCCTTGTCTCTCTTCTCTATTCCACTGCTGAGTAGACTAGTACTCTCTGACAATCAATTCTCTGGTCAAGTCCCTGAGTTTGCCAATATCTCTTCGTACTTACTGGAGACCCTTGATTTGAGTGGCAACAATTTGGTAGGATCAATACCAATATCTATATTTAATCTTCGAGGACTTTCTCAGCTGAATCTTTCTTCAAACAACTTGAGTGGCTTTCCTTTTAGTGGTATTCAACAGTCGAGAAATCTTTCATTTCTTGATCTTTCCCACAATAGCTTGTTGTTTAATGATGACAGGACCAATTCATCGCATTCCTCCTTACTTCAGGTTCAGGACTTGGTATTGGCTTCTAACAAGTTGAGAGCATTCCCAGATTTCTTGAGACACCAATTCCGATTAGCCTCTTTGGACCTTTCAGAAAACCAGATACAAGGGCAGATTCCCAATTGGATTTGGAGCCTCAGTTCTCTTAAAAAACTAAATCTCTCTTCAAACTCTTTGGTAACTCTAGAAGCTCCTTTGTTGAACTCTACTTCAACTGTGACTTCGCTCGACCTTCATTCAAACCAGCTTCAGGGACAAATCCCAATTTTCCTACCATTTGCCAATTACTTGGATTACTCAAAAAATAACTTCACTTCTAGTATACCGACTGACATTGGAACATCTTTGACAACATGGCAGGCAATGATGGCTAATGGAGATGATACCCCAATTGACCTTGGATTCTCATTCCAACCAGGCGGTGGAAGTGGGCTTGATATTTATTATGGAGATTCAATCACAACTACTAGCAAAGGTTTAGAGATGGATCTGTTCATGGAGAAATTGCCTCATGTTCACATTAAAGGAGTGCATGAGGAGGAGGAAGAGAATATGACTGGAATTTCAATCAAATTGACTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

486

Amino Acids

53.11

Weight (kDa)

4.83

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 219 - 277 2.6e-07 Leucine rich repeat
LRR_8 PF13855 316 - 375 1.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1298
AccI GTMKAC 2 cut(s) 586, 1198
AciI CCGC 1 cut(s) 1296
AclWI GGATC 6 cut(s) 99, 292, 381, 406, 700, 1371
AcsI RAATTY 2 cut(s) 316, 1437
AcuI CTGAAG 4 cut(s) 275, 376, 860, 1109
AfaI GTAC 2 cut(s) 594, 650
AfiI CCNNNNNNNGG 5 cut(s) 119, 281, 776, 1126, 1298
AflII CTTAAG 1 cut(s) 154
AhlI ACTAGT 1 cut(s) 589
AjnI CCWGG 2 cut(s) 118, 1291
AjuI GAANNNNNNNTTGG 2 cut(s) 185, 217
AloI GAACNNNNNNTCC 2 cut(s) 1000, 1032
AluBI AGCT 8 cut(s) 15, 64, 250, 390, 736, 828, 1067, 1123
AluI AGCT 8 cut(s) 15, 64, 250, 390, 736, 828, 1067, 1123
Alw26I GTCTC 3 cut(s) 564, 653, 928
AlwI GGATC 6 cut(s) 99, 292, 381, 406, 700, 1371
AoxI GGCC 1 cut(s) 37
ApoI RAATTY 2 cut(s) 316, 1437
ArsI GACNNNNNNTTYG 2 cut(s) 652, 684
Asp700I GAANNNNTTC 2 cut(s) 515, 799
AspS9I GGNCC 4 cut(s) 38, 328, 849, 961
AsuHPI GGTGA 1 cut(s) 448
AvaII GGWCC 3 cut(s) 328, 849, 961
BccI CCATC 3 cut(s) 461, 1237, 1354
BciT130I CCWGG 2 cut(s) 120, 1293
BcoDI GTCTC 3 cut(s) 564, 653, 928
BcuI ACTAGT 1 cut(s) 589
BfaI CTAG 5 cut(s) 366, 590, 1061, 1194, 1344
BfmI CTRYAG 1 cut(s) 342
BfrI CTTAAG 1 cut(s) 154
BlpI GCTNAGC 2 cut(s) 11, 60
BmcAI AGTACT 1 cut(s) 594
Bme1390I CCNGG 2 cut(s) 120, 1293
Bme18I GGWCC 3 cut(s) 328, 849, 961
BmgT120I GGNCC 4 cut(s) 38, 328, 849, 961
BmiI GGNNCC 4 cut(s) 259, 329, 472, 1010
BmrFI CCNGG 2 cut(s) 120, 1293
BpmI CTGGAG 2 cut(s) 96, 677
Bpu1102I GCTNAGC 2 cut(s) 11, 60
BpuEI CTTGAG 2 cut(s) 778, 952
BsaI GGTCTC 1 cut(s) 653
BsaJI CCNNGG 2 cut(s) 297, 1273
BsaXI ACNNNNNCTCC 2 cut(s) 1000, 1030
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 281, 776, 1126, 1298
Bse1I ACTGG 4 cut(s) 113, 205, 660, 1438
Bse3DI GCAATG 2 cut(s) 474, 1245
BseBI CCWGG 2 cut(s) 120, 1293
BseDI CCNNGG 2 cut(s) 297, 1273
BseLI CCNNNNNNNGG 5 cut(s) 119, 281, 776, 1126, 1298
BseMI GCAATG 2 cut(s) 474, 1245
BseMII CTCAG 5 cut(s) 66, 572, 618, 746, 1027
BseNI ACTGG 4 cut(s) 113, 205, 660, 1438
BseRI GAGGAG 2 cut(s) 1427, 1430
BshFI GGCC 1 cut(s) 39
BslFI GGGAC 3 cut(s) 559, 608, 1143
BslI CCNNNNNNNGG 5 cut(s) 119, 281, 776, 1126, 1298
BsmAI GTCTC 3 cut(s) 564, 653, 928
BsmFI GGGAC 3 cut(s) 559, 608, 1143
BsmI GAATGC 2 cut(s) 862, 917
BsnI GGCC 1 cut(s) 39
Bso31I GGTCTC 1 cut(s) 653
Bsp143I GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
Bsp1720I GCTNAGC 2 cut(s) 11, 60
BspACI CCGC 1 cut(s) 1296
BspANI GGCC 1 cut(s) 39
BspCNI CTCAG 5 cut(s) 65, 573, 619, 745, 1026
BspHI TCATGA 1 cut(s) 46
BspLI GGNNCC 4 cut(s) 259, 329, 472, 1010
BspPI GGATC 6 cut(s) 99, 292, 381, 406, 700, 1371
BspTI CTTAAG 1 cut(s) 154
BspTNI GGTCTC 1 cut(s) 653
BsrDI GCAATG 2 cut(s) 474, 1245
BsrI ACTGG 4 cut(s) 113, 205, 660, 1438
BssECI CCNNGG 2 cut(s) 297, 1273
BssMI GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
BssNAI GTATAC 1 cut(s) 1199
BssT1I CCWWGG 2 cut(s) 297, 1273
Bst1107I GTATAC 1 cut(s) 1199
Bst2UI CCWGG 2 cut(s) 120, 1293
Bst4CI ACNGT 3 cut(s) 432, 789, 1093
Bst6I CTCTTC 5 cut(s) 294, 569, 649, 1045, 1416
BstAFI CTTAAG 1 cut(s) 154
BstC8I GCNNGC 1 cut(s) 1236
BstDEI CTNAG 8 cut(s) 11, 52, 60, 305, 581, 627, 732, 1013
BstEII GGTNACC 1 cut(s) 347
BstKTI GATC 8 cut(s) 31, 94, 287, 376, 401, 695, 814, 1366
BstMAI GTCTC 3 cut(s) 564, 653, 928
BstMBI GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
BstMWI GCNNNNNNNGC 1 cut(s) 1244
BstNI CCWGG 2 cut(s) 120, 1293
BstPI GGTNACC 1 cut(s) 347
BstSCI CCNGG 2 cut(s) 118, 1291
BstSFI CTRYAG 1 cut(s) 342
BstX2I RGATCY 3 cut(s) 284, 373, 1363
BstXI CCANNNNNNTGG 1 cut(s) 1165
BstYI RGATCY 3 cut(s) 284, 373, 1363
BstZ17I GTATAC 1 cut(s) 1199
BsuRI GGCC 1 cut(s) 39
BtgZI GCGATG 1 cut(s) 843
BtsI GCAGTG 1 cut(s) 575
BtsIMutI CAGTG 4 cut(s) 400, 420, 494, 575
Cac8I GCNNGC 1 cut(s) 1236
CciI TCATGA 1 cut(s) 46
Cfr13I GGNCC 4 cut(s) 38, 328, 849, 961
Csp6I GTAC 2 cut(s) 593, 649
CspCI CAANNNNNGTGG 4 cut(s) 396, 431, 742, 777
CviAII CATG 6 cut(s) 47, 520, 1230, 1372, 1388, 1409
CviQI GTAC 2 cut(s) 593, 649
DdeI CTNAG 8 cut(s) 11, 52, 60, 305, 581, 627, 732, 1013
DpnI GATC 8 cut(s) 30, 93, 286, 375, 400, 694, 813, 1365
DpnII GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
Eam1104I CTCTTC 5 cut(s) 294, 569, 649, 1045, 1416
EarI CTCTTC 5 cut(s) 294, 569, 649, 1045, 1416
Eco130I CCWWGG 2 cut(s) 297, 1273
Eco31I GGTCTC 1 cut(s) 653
Eco47I GGWCC 3 cut(s) 328, 849, 961
Eco57I CTGAAG 4 cut(s) 275, 376, 860, 1109
Eco91I GGTNACC 1 cut(s) 347
EcoO109I RGGNCCY 2 cut(s) 38, 328
EcoO65I GGTNACC 1 cut(s) 347
EcoRII CCWGG 2 cut(s) 118, 1291
EcoT14I CCWWGG 2 cut(s) 297, 1273
ErhI CCWWGG 2 cut(s) 297, 1273
FaeI CATG 6 cut(s) 50, 523, 1233, 1375, 1391, 1412
FaqI GGGAC 3 cut(s) 559, 608, 1143
FatI CATG 6 cut(s) 46, 519, 1229, 1371, 1387, 1408
FblI GTMKAC 2 cut(s) 586, 1198
FspBI CTAG 5 cut(s) 366, 590, 1061, 1194, 1344
GsuI CTGGAG 2 cut(s) 96, 677
HaeIII GGCC 1 cut(s) 39
Hin1II CATG 6 cut(s) 50, 523, 1233, 1375, 1391, 1412
HindIII AAGCTT 1 cut(s) 62
HinfI GANTC 7 cut(s) 50, 123, 527, 739, 991, 1278, 1328
HphI GGTGA 1 cut(s) 448
Hpy166II GTNNAC 3 cut(s) 587, 1199, 1393
Hpy188I TCNGA 4 cut(s) 510, 601, 947, 970
Hpy188III TCNNGA 7 cut(s) 47, 366, 792, 809, 884, 931, 1061
Hpy8I GTNNAC 3 cut(s) 587, 1199, 1393
HpyAV CCTTC 1 cut(s) 1118
HpyCH4III ACNGT 3 cut(s) 432, 789, 1093
HpyCH4V TGCA 2 cut(s) 178, 1408
HpyF10VI GCNNNNNNNGC 1 cut(s) 1244
HpyF3I CTNAG 8 cut(s) 11, 52, 60, 305, 581, 627, 732, 1013
Hsp92II CATG 6 cut(s) 50, 523, 1233, 1375, 1391, 1412
Kzo9I GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
LmnI GCTCC 4 cut(s) 115, 476, 1008, 1072
MaeI CTAG 5 cut(s) 366, 590, 1061, 1194, 1344
MaeIII GTNAC 4 cut(s) 270, 347, 1054, 1093
MalI GATC 8 cut(s) 30, 93, 286, 375, 400, 694, 813, 1365
MboI GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
MboII GAAGA 7 cut(s) 281, 556, 636, 710, 738, 1032, 1433
MfeI CAATTG 2 cut(s) 997, 1266
MflI RGATCY 3 cut(s) 284, 373, 1363
MlyI GAGTC 2 cut(s) 44, 521
MmeI TCCRAC 2 cut(s) 504, 1312
MnlI CCTC 9 cut(s) 362, 716, 877, 964, 1022, 1395, 1405, 1408, 1411
MroXI GAANNNNTTC 2 cut(s) 515, 799
MseI TTAA 7 cut(s) 155, 239, 504, 714, 837, 1023, 1398
MspA1I CMGCKG 1 cut(s) 736
MspCI CTTAAG 1 cut(s) 154
MspR9I CCNGG 2 cut(s) 120, 1293
MunI CAATTG 2 cut(s) 997, 1266
Mva1269I GAATGC 2 cut(s) 862, 917
MvaI CCWGG 2 cut(s) 120, 1293
MwoI GCNNNNNNNGC 1 cut(s) 1244
NdeII GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
NlaIII CATG 6 cut(s) 50, 523, 1233, 1375, 1391, 1412
NlaIV GGNNCC 4 cut(s) 259, 329, 472, 1010
NmuCI GTSAC 1 cut(s) 1093
PagI TCATGA 1 cut(s) 46
PctI GAATGC 2 cut(s) 862, 917
PdmI GAANNNNTTC 2 cut(s) 515, 799
PfeI GAWTC 5 cut(s) 123, 739, 991, 1278, 1328
PflMI CCANNNNNTGG 1 cut(s) 1298
PfoI TCCNGGA 1 cut(s) 118
PleI GAGTC 2 cut(s) 44, 521
PpsI GAGTC 2 cut(s) 44, 521
PpuMI RGGWCCY 1 cut(s) 328
Psp5II RGGWCCY 1 cut(s) 328
Psp6I CCWGG 2 cut(s) 118, 1291
PspEI GGTNACC 1 cut(s) 347
PspGI CCWGG 2 cut(s) 118, 1291
PspN4I GGNNCC 4 cut(s) 259, 329, 472, 1010
PspPI GGNCC 4 cut(s) 38, 328, 849, 961
PspPPI RGGWCCY 1 cut(s) 328
PsuI RGATCY 3 cut(s) 284, 373, 1363
PvuII CAGCTG 1 cut(s) 736
RsaI GTAC 2 cut(s) 594, 650
RsaNI GTAC 2 cut(s) 593, 649
SaqAI TTAA 7 cut(s) 155, 239, 504, 714, 837, 1023, 1398
Sau3AI GATC 8 cut(s) 28, 91, 284, 373, 398, 692, 811, 1363
Sau96I GGNCC 4 cut(s) 38, 328, 849, 961
ScaI AGTACT 1 cut(s) 594
SchI GAGTC 2 cut(s) 44, 521
ScrFI CCNGG 2 cut(s) 120, 1293
SfcI CTRYAG 1 cut(s) 342
SinI GGWCC 3 cut(s) 328, 849, 961
SmlI CTYRAG 3 cut(s) 154, 757, 931
SmoI CTYRAG 3 cut(s) 154, 757, 931
SpeI ACTAGT 1 cut(s) 589
SsiI CCGC 1 cut(s) 1296
SspMI CTAG 5 cut(s) 366, 590, 1061, 1194, 1344
StyD4I CCNGG 2 cut(s) 118, 1291
StyI CCWWGG 2 cut(s) 297, 1273
TaaI ACNGT 3 cut(s) 432, 789, 1093
TaqI TCGA 3 cut(s) 721, 791, 1104
TatI WGTACW 1 cut(s) 592
TfiI GAWTC 5 cut(s) 123, 739, 991, 1278, 1328
Tru1I TTAA 7 cut(s) 155, 239, 504, 714, 837, 1023, 1398
Tru9I TTAA 7 cut(s) 155, 239, 504, 714, 837, 1023, 1398
TscAI CASTG 4 cut(s) 400, 420, 494, 582
TseFI GTSAC 1 cut(s) 1093
Tsp45I GTSAC 1 cut(s) 1093
TspDTI ATGAA 7 cut(s) 35, 56, 508, 792, 846, 1100, 1360
TspRI CASTG 4 cut(s) 400, 420, 494, 582
Van91I CCANNNNNTGG 1 cut(s) 1298
Vha464I CTTAAG 1 cut(s) 154
VpaK11BI GGWCC 3 cut(s) 328, 849, 961
XapI RAATTY 2 cut(s) 316, 1437
XbaI TCTAGA 2 cut(s) 365, 1060
XcmI CCANNNNNNNNNTGG 1 cut(s) 1295
XmiI GTMKAC 2 cut(s) 586, 1198
XmnI GAANNNNTTC 2 cut(s) 515, 799
XspI CTAG 5 cut(s) 366, 590, 1061, 1194, 1344
ZrmI AGTACT 1 cut(s) 594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.