RchiOBHm_Chr5g0037311

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000047
Physical Location & Seq
Forward (+)
31739473 .. 31743718
4246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31604

Sequence Viewer

Length: 3228 bp
ATGCCAACTCTGTTACTCCATTTCTTCCTTTTCTTATTCACTACCACTATTACTAACCTCATCCCTGCAATTCACAGCAGGTGTATTGAAGTCGAGCAACAATCATTGCTCCATTTCAAGAAAAGTCTTGTATTTGATTCTTCCAAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGACTGCTGTTCTTGGCTTGGTGTAACTTGCAGCACTAATGGGAGTGTTGTTTGTATTGACATCAGTAGCGAGTCTTTCTCATCATTCTCACGCAGCATTGACAATTCCAGCAGTCTGTTCCAAATTCAACATCTTCAGAGCCTCAATTTAGCCTATAACTACTTCAATGGCTCATCAATTCCATCTGCAATCGAAAAGCTTACAGAATTGAGGTATCTGAATTTAAGTCATGCTTATTTTTCTGGTCAGATTCCCATTGAAATTTCACTCTTAATAAGGCTGATAACTCTTGATATCTCTAGAAATGGCTTCGATGTATTTTCGTTACAACTTGAGAACCCAAATTTAAGCATGCTAATTCAGAACCTCACAAAGCTTACAGAGTTATATCTTGATTCAATAGAGATAAAAAGATGGATGAGTGACTGGTGCGAAGCCATATCATCTTCACTACCAAATCTGAGGGTGTTAAGCTTGTCTGATTGTGGTTTTGTAGGCCCTATTTGTGCGTCCCTTGCAAAGCTTCAATCTCTGTCTGAGATTGACTTGTCATTTAACTTGTTCTATGCTCCCGTTCCAAGAGTCTTTGCTAATTTTTCAAACTTGACTTACTTGAGTCTTGGTTCTTCTAACTTGTTCGGAACATTTCCTAGAGAGTTCTTTCAGATACCTTCCCTACAAACCATTGACCTTTCCTTTAATGATCTTTATGGTTCCTTTCCAGAATTTCCAAACAACGGGTCTCTTCGAATGTTATCAAGCATAGATATTTCAAATTGCAGTTTTACTGGATCAGTTCCCAAGTCAATTGAAAACCTCACACAATTGGCTGACCTGGATATATCAGCGAACAGTTTTACTAGTCCCATTAGTTCTATTCACTGGGAAACCCTTGTTAATCTAGAAATCCTCGATTTGAGCAACAATCAACTCTATGGGACTATTCCTTCATCTATTGTTTCTCTTCCCAAACTGGAAACATTAAAATTATCCGACAATCAGTTCTCAGGTCAAGTCCCTGAATTTTCCAGTAACTCTTCGCACTTACTTGACACCCTTGATTTGGAAAACAACAATTTGGAAGGACAAATACCAACATCTATCTTCAATCTTCAAGGGCTTTTGTTTCTCAGTCTTTCTTCAAACAACTTCAATGGCTTCCCTTTTAATGGTCCTCAGGTGCCCAAAGATCTTTTATCGGTTGATCTTTCCCATAATAGCTTGTTGTTTGATTACAATGGCACCAATTCCTCCTTCCTTCAGATTCACCACTTGGTAATTTTGAGTCTCAAATCTCTTACTTCCATTGATCTTTCTGGCAACTTCTTGGTGACTCTAGAAGCTCCTCTTCCTAATTCCACTTCTGCTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGTATCCATTCCTCATCTTCCTTCCTTCAGCTTGATCACTTGGGATTAGCTTCTAACAAGTTGACAACATTCCCAGACTTCTTGAGAAATCAATCCCATTTAACCAACTTAGACCTCTCAAACAACCAGATTCAAGGACAGATACCCAATTGGATTTGGAGTTTTGATTCTCTTCGAGAAATAAATCTTTCTTGTAACTCATTGGGAAGTTTAGAAGCTCCTCTACTTAATTCTACCTATGTTCTGTCATTGGTTGATCTTCATTCAAACCAGCTTCGGGGACAGATCCCCTTGTTCTTAAGCGGTGAATATATGGATTACTCGAGAAATAATTTCAACTCGAGTATACCGACTGACATTGGTGACTTCATTTCTACTGGGTCTTACCTTTCTCTTTCAAGCAATAACTTTCATGGGGCCATTCCTAAATCAATATGCAATGCAAGGGGTAAGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGAAACATTCCTCAATGCTTGACTCAATTACTTTCGCTTTGGGTCATTGATTTGAGGAGAAACAACCTGAGTGGCACAATTCCTGATAATTTTCTCAAAGGTTGTGAACTAAAAACTCTAGACCTCAGCAACAATCAAATACAAGGCCAATTTCCAAAATCTCTTGTCTACTGCACAAGGTTAGTGGTTTTAAACCTTGGAAACAATAACATAACTGATACTTTTCCATGCTTTTTAATGAGCATATCCACCTTGAGTGTCCTTGCTTTGCGGTCTAACAAGTTTTGTGGAAGCATTGGATGTTCCAAGACCAATGGCATCTGGCCTCTGCTTCAAATAATAGATTTAGCTCACAACAATTTCAGTGGTGATATGCCAGGAAGAATGTTTCTGACATGGCAGGCTATGGTGTCTAATGATGAATCTCCAACTAATCTTGGATTCTCTTATAGACCGATCAACTCTCTTATAAAAGAAGATCCTCACGTTTATTATAAAGATGCAATTACAACTATCATCAAAGGATTGGAGTTTCATCTGGTAAAGATTCCAACTAAATTGACCTTGGTTGATTTCTCCTTCAACAATTTCAACGGATTAATACCTAAGGAAATCAGAGAGTTGAAATCACCATGTGTCCTAAACTTATCCGGTAATGCTTTCACAGGAAAAATTCCATCATCATTTGGTAAGATGCGACAACTGGAGTCTTTAGATCTCTCAAAGAACCACTTGAGCGGCCAAATTCCAGCACAGTTTGCAAATCTCACTTTCCTTGCATTCTTGGATATCTCAAATAATCAACTGGTCGGGAGGATCCCAACCTGCACTCAGTTTTCAACATTTCCAAATACCTCCTTCCAAGGTAACAAAGGATTATGGGGCCCTCCTTTGACAGTGGATGTAGTATTGCCACCACCAATTTCAAATGGAAGCTCAAGTCATCCAAATTCTGGAGATGAGATTGATTGGGATGTTATCTATGTAGAAATTGGATTTACATGTGGGTTTGGAATTGCCATTGGGTCACTTTTATTTTGCAAAAGATGGAGGAAATGGTATTACAGAGCTATGTGTAGTATTCTTTTCAAGATATTCCCTCAGCTGGAGCAGAGATTTGGTAATCATAGAAGACATGTCTACGTAAACACAAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1075

Amino Acids

119.57

Weight (kDa)

5.84

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 1.2e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 317 4.1e-12 Leucine-rich repeat region
LRR_8 PF13855 237 - 296 2.2e-08 Leucine rich repeat
LRR_8 PF13855 356 - 395 5.3e-06 Leucine rich repeat
LRR_4 PF12799 360 - 397 3.4e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 492 - 549 1e-05 Leucine rich repeat
LRR_8 PF13855 538 - 596 2.1e-06 Leucine rich repeat
LRR_8 PF13855 705 - 760 3.8e-07 Leucine rich repeat
LRR_8 PF13855 725 - 784 3.7e-06 Leucine rich repeat
LRR_4 PF12799 725 - 762 4.6e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 902 - 958 8.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2537, 2562
AarI CACCTGC 1 cut(s) 69
Acc36I ACCTGC 2 cut(s) 69, 2900
AccB1I GGYRCC 2 cut(s) 1360, 1421
AccB7I CCANNNNNTGG 1 cut(s) 3020
AccBSI CCGCTC 1 cut(s) 2805
AccI GTMKAC 3 cut(s) 1930, 2235, 3207
AciI CCGC 3 cut(s) 1887, 2338, 2805
AclWI GGATC 5 cut(s) 979, 1864, 2540, 2878, 2891
AcoI YGGCCR 1 cut(s) 2806
AcuI CTGAAG 3 cut(s) 299, 1424, 1595
AdeI CACNNNGTG 1 cut(s) 2702
AfaI GTAC 1 cut(s) 178
AfiI CCNNNNNNNGG 6 cut(s) 917, 1243, 1349, 1861, 3020, 3172
AflII CTTAAG 1 cut(s) 1882
AflIII ACRYGT 2 cut(s) 3068, 3202
AhlI ACTAGT 1 cut(s) 1040
AjnI CCWGG 2 cut(s) 1014, 2443
AjuI GAANNNNNNNTTGG 2 cut(s) 1418, 1450
Alw26I GTCTC 2 cut(s) 927, 1472
AlwI GGATC 5 cut(s) 979, 1864, 2540, 2878, 2891
Ama87I CYCGRG 2 cut(s) 1906, 1924
AoxI GGCC 6 cut(s) 676, 2001, 2212, 2390, 2806, 2950
ApaI GGGCCC 1 cut(s) 2954
ApeKI GCWGC 2 cut(s) 210, 273
ArsI GACNNNNNNTTYG 2 cut(s) 905, 937
AseI ATTAAT 1 cut(s) 2666
AspS9I GGNCC 6 cut(s) 677, 1352, 1561, 2001, 2950, 2951
AsuHPI GGTGA 6 cut(s) 1439, 1522, 1901, 1958, 2447, 2688
AsuII TTCGAA 1 cut(s) 928
AvaI CYCGRG 2 cut(s) 1906, 1924
AvaII GGWCC 2 cut(s) 1352, 1561
AxyI CCTNAGG 2 cut(s) 1356, 2673
BaeGI GKGCMC 2 cut(s) 1365, 2954
BamHI GGATCC 1 cut(s) 2883
BanI GGYRCC 2 cut(s) 1360, 1421
BanII GRGCYC 1 cut(s) 2954
BarI GAAGNNNNNNTAC 4 cut(s) 1254, 1286, 1791, 1823
BbsI GAAGAC 1 cut(s) 3205
BbvCI CCTCAGC 2 cut(s) 2192, 3168
BbvI GCAGC 2 cut(s) 222, 285
BccI CCATC 4 cut(s) 370, 588, 2752, 3108
BciT130I CCWGG 2 cut(s) 1016, 2445
BciVI GTATCC 1 cut(s) 1598
BclI TGATCA 1 cut(s) 1618
BcoDI GTCTC 2 cut(s) 927, 1472
BcuI ACTAGT 1 cut(s) 1040
BfaI CTAG 6 cut(s) 480, 831, 1041, 1082, 1517, 2186
BfrI CTTAAG 1 cut(s) 1882
BfuAI ACCTGC 2 cut(s) 69, 2900
BfuI GTATCC 1 cut(s) 1598
BglII AGATCT 2 cut(s) 1369, 2782
BisI GCNGC 3 cut(s) 211, 274, 2806
BlsI GCNGC 3 cut(s) 212, 275, 2807
Bme1390I CCNGG 2 cut(s) 1016, 2445
Bme18I GGWCC 2 cut(s) 1352, 1561
BmeT110I CYCGRG 2 cut(s) 1906, 1924
BmgT120I GGNCC 6 cut(s) 677, 1352, 1561, 2001, 2950, 2951
BmiI GGNNCC 7 cut(s) 895, 1362, 1423, 2002, 2885, 2951, 2952
BmrFI CCNGG 2 cut(s) 1016, 2445
BmrI ACTGGG 2 cut(s) 1072, 1971
BmsI GCATC 3 cut(s) 2394, 2557, 2751
BmuI ACTGGG 2 cut(s) 1072, 1971
BpiI GAAGAC 1 cut(s) 3205
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 3 cut(s) 2792, 3042, 3194
Bpu10I CCTNAGC 2 cut(s) 2192, 3168
Bpu14I TTCGAA 1 cut(s) 928
BpuEI CTTGAG 7 cut(s) 533, 814, 1687, 2083, 2341, 2821, 2989
BsaAI YACGTR 1 cut(s) 3211
BsaI GGTCTC 1 cut(s) 927
BsaJI CCNNGG 3 cut(s) 2263, 2631, 2929
BsaWI WCCGGW 1 cut(s) 2717
Bsc4I CCNNNNNNNGG 6 cut(s) 917, 1243, 1349, 1861, 3020, 3172
Bse1I ACTGG 8 cut(s) 611, 973, 1067, 1158, 1209, 1966, 2775, 2877
Bse21I CCTNAGG 2 cut(s) 1356, 2673
Bse3DI GCAATG 2 cut(s) 104, 2029
BseBI CCWGG 2 cut(s) 1016, 2445
BseDI CCNNGG 3 cut(s) 2263, 2631, 2929
BseGI GGATG 6 cut(s) 60, 603, 2372, 2974, 3010, 3046
BseLI CCNNNNNNNGG 6 cut(s) 917, 1243, 1349, 1861, 3020, 3172
BseMI GCAATG 2 cut(s) 104, 2029
BseMII CTCAG 9 cut(s) 632, 708, 1200, 1324, 1370, 2126, 2206, 2912, 3182
BseNI ACTGG 8 cut(s) 611, 973, 1067, 1158, 1209, 1966, 2775, 2877
BseRI GAGGAG 3 cut(s) 1515, 1794, 2137
BseSI GKGCMC 2 cut(s) 1365, 2954
BseXI GCAGC 2 cut(s) 222, 285
BsgI GTGCAG 2 cut(s) 2224, 2878
BshFI GGCC 6 cut(s) 678, 2003, 2214, 2392, 2808, 2952
BshNI GGYRCC 2 cut(s) 1360, 1421
BsiHKCI CYCGRG 2 cut(s) 1906, 1924
BsiSI CCGG 1 cut(s) 2718
BslFI GGGAC 5 cut(s) 676, 1029, 1132, 1181, 1878
BslI CCNNNNNNNGG 6 cut(s) 917, 1243, 1349, 1861, 3020, 3172
BsmAI GTCTC 2 cut(s) 927, 1472
BsmFI GGGAC 5 cut(s) 676, 1029, 1132, 1181, 1878
BsmI GAATGC 1 cut(s) 2846
BsnI GGCC 6 cut(s) 678, 2003, 2214, 2392, 2808, 2952
Bso31I GGTCTC 1 cut(s) 927
BsoBI CYCGRG 2 cut(s) 1906, 1924
Bsp119I TTCGAA 1 cut(s) 928
Bsp120I GGGCCC 1 cut(s) 2950
Bsp1286I GDGCHC 2 cut(s) 1365, 2954
BspACI CCGC 3 cut(s) 1887, 2338, 2805
BspANI GGCC 6 cut(s) 678, 2003, 2214, 2392, 2808, 2952
BspCNI CTCAG 9 cut(s) 633, 709, 1199, 1323, 1369, 2127, 2205, 2911, 3181
BspLI GGNNCC 7 cut(s) 895, 1362, 1423, 2002, 2885, 2951, 2952
BspMI ACCTGC 2 cut(s) 69, 2900
BspPI GGATC 5 cut(s) 979, 1864, 2540, 2878, 2891
BspT104I TTCGAA 1 cut(s) 928
BspT107I GGYRCC 2 cut(s) 1360, 1421
BspTI CTTAAG 1 cut(s) 1882
BspTNI GGTCTC 1 cut(s) 927
BsrBI CCGCTC 1 cut(s) 2805
BsrDI GCAATG 2 cut(s) 104, 2029
BsrI ACTGG 8 cut(s) 611, 973, 1067, 1158, 1209, 1966, 2775, 2877
BssECI CCNNGG 3 cut(s) 2263, 2631, 2929
BssNAI GTATAC 1 cut(s) 1931
BssT1I CCWWGG 3 cut(s) 2263, 2631, 2929
Bst1107I GTATAC 1 cut(s) 1931
Bst2UI CCWGG 2 cut(s) 1016, 2445
Bst4CI ACNGT 3 cut(s) 1034, 2823, 2965
Bst6I CTCTTC 5 cut(s) 930, 1149, 1222, 1533, 1761
BstAFI CTTAAG 1 cut(s) 1882
BstAPI GCANNNNNTGC 1 cut(s) 2825
BstBAI YACGTR 1 cut(s) 3211
BstBI TTCGAA 1 cut(s) 928
BstC8I GCNNGC 2 cut(s) 533, 2469
BstF5I GGATG 6 cut(s) 60, 603, 2372, 2974, 3010, 3046
BstMAI GTCTC 2 cut(s) 927, 1472
BstMWI GCNNNNNNNGC 2 cut(s) 695, 2825
BstNI CCWGG 2 cut(s) 1016, 2445
BstNSI RCATGY 3 cut(s) 535, 3072, 3206
BstSCI CCNGG 2 cut(s) 1014, 2443
BstSLI GKGCMC 2 cut(s) 1365, 2954
BstSNI TACGTA 1 cut(s) 3211
BstV1I GCAGC 2 cut(s) 222, 285
BstV2I GAAGAC 1 cut(s) 3205
BstX2I RGATCY 5 cut(s) 1369, 1869, 2545, 2782, 2883
BstYI RGATCY 5 cut(s) 1369, 1869, 2545, 2782, 2883
BstZ17I GTATAC 1 cut(s) 1931
Bsu36I CCTNAGG 2 cut(s) 1356, 2673
BsuI GTATCC 1 cut(s) 1598
BsuRI GGCC 6 cut(s) 678, 2003, 2214, 2392, 2808, 2952
BtsCI GGATG 6 cut(s) 60, 603, 2372, 2974, 3010, 3046
BtsIMutI CAGTG 3 cut(s) 1060, 2437, 2970
BveI ACCTGC 2 cut(s) 69, 2900
Cac8I GCNNGC 2 cut(s) 533, 2469
Cfr13I GGNCC 6 cut(s) 677, 1352, 1561, 2001, 2950, 2951
CseI GACGC 1 cut(s) 678
Csp6I GTAC 1 cut(s) 177
CspCI CAANNNNNGTGG 8 cut(s) 2119, 2154, 2232, 2267, 2335, 2370, 2413, 2448
CviAII CATG 9 cut(s) 165, 410, 532, 1997, 2295, 2463, 2700, 3069, 3203
CviQI GTAC 1 cut(s) 177
DraI TTTAAA 1 cut(s) 2259
DraIII CACNNNGTG 1 cut(s) 2702
EaeI YGGCCR 1 cut(s) 2806
Eam1104I CTCTTC 5 cut(s) 930, 1149, 1222, 1533, 1761
EarI CTCTTC 5 cut(s) 930, 1149, 1222, 1533, 1761
Eco105I TACGTA 1 cut(s) 3211
Eco130I CCWWGG 3 cut(s) 2263, 2631, 2929
Eco24I GRGCYC 1 cut(s) 2954
Eco31I GGTCTC 1 cut(s) 927
Eco32I GATATC 2 cut(s) 475, 2857
Eco47I GGWCC 2 cut(s) 1352, 1561
Eco57I CTGAAG 3 cut(s) 299, 1424, 1595
Eco81I CCTNAGG 2 cut(s) 1356, 2673
Eco88I CYCGRG 2 cut(s) 1906, 1924
EcoO109I RGGNCCY 3 cut(s) 677, 2950, 2951
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 2 cut(s) 1014, 2443
EcoRV GATATC 2 cut(s) 475, 2857
EcoT14I CCWWGG 3 cut(s) 2263, 2631, 2929
EcoT38I GRGCYC 1 cut(s) 2954
ErhI CCWWGG 3 cut(s) 2263, 2631, 2929
FaeI CATG 9 cut(s) 168, 413, 535, 2000, 2298, 2466, 2703, 3072, 3206
FalI AAGNNNNNCTT 6 cut(s) 397, 429, 1512, 1544, 2783, 2815
FaqI GGGAC 5 cut(s) 676, 1029, 1132, 1181, 1878
FatI CATG 9 cut(s) 164, 409, 531, 1996, 2294, 2462, 2699, 3068, 3202
FbaI TGATCA 1 cut(s) 1618
FblI GTMKAC 3 cut(s) 1930, 2235, 3207
Fnu4HI GCNGC 3 cut(s) 211, 274, 2806
FokI GGATG 6 cut(s) 47, 610, 2379, 2981, 2997, 3053
FriOI GRGCYC 1 cut(s) 2954
Fsp4HI GCNGC 3 cut(s) 211, 274, 2806
FspBI CTAG 6 cut(s) 480, 831, 1041, 1082, 1517, 2186
GluI GCNGC 3 cut(s) 211, 274, 2806
GsuI CTGGAG 3 cut(s) 2792, 3042, 3194
HaeIII GGCC 6 cut(s) 678, 2003, 2214, 2392, 2808, 2952
HapII CCGG 1 cut(s) 2718
HgaI GACGC 1 cut(s) 678
Hin1II CATG 9 cut(s) 168, 413, 535, 2000, 2298, 2466, 2703, 3072, 3206
HincII GTYRAC 1 cut(s) 1647
HindII GTYRAC 1 cut(s) 1647
HindIII AAGCTT 6 cut(s) 155, 377, 554, 652, 701, 1577
HpaII CCGG 1 cut(s) 2718
HphI GGTGA 6 cut(s) 1439, 1522, 1901, 1958, 2447, 2688
Hpy166II GTNNAC 6 cut(s) 1647, 1931, 2174, 2236, 3208, 3214
Hpy8I GTNNAC 6 cut(s) 1647, 1931, 2174, 2236, 3208, 3214
HpyCH4III ACNGT 3 cut(s) 1034, 2823, 2965
HpyCH4IV ACGT 2 cut(s) 2553, 3210
HpyF10VI GCNNNNNNNGC 2 cut(s) 695, 2825
HpySE526I ACGT 2 cut(s) 2553, 3210
Hsp92II CATG 9 cut(s) 168, 413, 535, 2000, 2298, 2466, 2703, 3072, 3206
Ksp22I TGATCA 1 cut(s) 1618
LmnI GCTCC 5 cut(s) 114, 754, 1528, 1807, 3175
Lsp1109I GCAGC 2 cut(s) 222, 285
LweI GCATC 3 cut(s) 2394, 2557, 2751
MaeI CTAG 6 cut(s) 480, 831, 1041, 1082, 1517, 2186
MaeII ACGT 2 cut(s) 2553, 3210
MbiI CCGCTC 1 cut(s) 2805
MfeI CAATTG 3 cut(s) 987, 1004, 1732
MflI RGATCY 5 cut(s) 1369, 1869, 2545, 2782, 2883
MhlI GDGCHC 2 cut(s) 1365, 2954
MlyI GAGTC 7 cut(s) 260, 771, 805, 1474, 1507, 2083, 2783
MmeI TCCRAC 4 cut(s) 1197, 1596, 2519, 2642
MspA1I CMGCKG 1 cut(s) 3172
MspCI CTTAAG 1 cut(s) 1882
MspI CCGG 1 cut(s) 2718
MspR9I CCNGG 2 cut(s) 1016, 2445
MunI CAATTG 3 cut(s) 987, 1004, 1732
Mva1269I GAATGC 1 cut(s) 2846
MvaI CCWGG 2 cut(s) 1016, 2445
MwoI GCNNNNNNNGC 2 cut(s) 695, 2825
NlaIII CATG 9 cut(s) 168, 413, 535, 2000, 2298, 2466, 2703, 3072, 3206
NlaIV GGNNCC 7 cut(s) 895, 1362, 1423, 2002, 2885, 2951, 2952
NmuCI GTSAC 4 cut(s) 602, 1510, 1946, 3093
NspI RCATGY 3 cut(s) 535, 3072, 3206
NspV TTCGAA 1 cut(s) 928
PaeI GCATGC 1 cut(s) 535
PaeR7I CTCGAG 2 cut(s) 1906, 1924
PaqCI CACCTGC 1 cut(s) 69
PciI ACATGT 2 cut(s) 3068, 3202
PcsI WCGNNNNNNNCGW 1 cut(s) 1931
PctI GAATGC 1 cut(s) 2846
PfeI GAWTC 9 cut(s) 137, 430, 575, 1444, 1714, 1751, 2489, 2508, 2614
PflMI CCANNNNNTGG 1 cut(s) 3020
PkrI GCNGC 3 cut(s) 212, 275, 2807
PleI GAGTC 7 cut(s) 259, 770, 804, 1473, 1507, 2083, 2782
PpsI GAGTC 7 cut(s) 259, 770, 804, 1473, 1507, 2083, 2782
Ppu21I YACGTR 1 cut(s) 3211
PscI ACATGT 2 cut(s) 3068, 3202
PshBI ATTAAT 1 cut(s) 2666
PsiI TTATAA 2 cut(s) 2537, 2562
Psp6I CCWGG 2 cut(s) 1014, 2443
PspGI CCWGG 2 cut(s) 1014, 2443
PspN4I GGNNCC 7 cut(s) 895, 1362, 1423, 2002, 2885, 2951, 2952
PspOMI GGGCCC 1 cut(s) 2950
PspPI GGNCC 6 cut(s) 677, 1352, 1561, 2001, 2950, 2951
PspXI VCTCGAGB 1 cut(s) 1924
PsuI RGATCY 5 cut(s) 1369, 1869, 2545, 2782, 2883
PvuII CAGCTG 1 cut(s) 3172
RsaI GTAC 1 cut(s) 178
RsaNI GTAC 1 cut(s) 177
SatI GCNGC 3 cut(s) 211, 274, 2806
Sau96I GGNCC 6 cut(s) 677, 1352, 1561, 2001, 2950, 2951
SchI GAGTC 7 cut(s) 260, 771, 805, 1474, 1507, 2083, 2783
ScrFI CCNGG 2 cut(s) 1016, 2445
SduI GDGCHC 2 cut(s) 1365, 2954
SfaNI GCATC 3 cut(s) 2394, 2557, 2751
Sfr274I CTCGAG 2 cut(s) 1906, 1924
SfuI TTCGAA 1 cut(s) 928
SinI GGWCC 2 cut(s) 1352, 1561
SlaI CTCGAG 2 cut(s) 1906, 1924
SnaBI TACGTA 1 cut(s) 3211
SpeI ACTAGT 1 cut(s) 1040
SphI GCATGC 1 cut(s) 535
SsiI CCGC 3 cut(s) 1887, 2338, 2805
SspMI CTAG 6 cut(s) 480, 831, 1041, 1082, 1517, 2186
StyD4I CCNGG 2 cut(s) 1014, 2443
StyI CCWWGG 3 cut(s) 2263, 2631, 2929
TaaI ACNGT 3 cut(s) 1034, 2823, 2965
TaiI ACGT 2 cut(s) 2556, 3213
TaqI TCGA 9 cut(s) 93, 173, 372, 492, 928, 1092, 1759, 1907, 1925
TaqII GACCGA 1 cut(s) 2536
TauI GCSGC 1 cut(s) 2808
TfiI GAWTC 9 cut(s) 137, 430, 575, 1444, 1714, 1751, 2489, 2508, 2614
TscAI CASTG 3 cut(s) 1067, 2437, 2970
TseFI GTSAC 4 cut(s) 602, 1510, 1946, 3093
TseI GCWGC 2 cut(s) 210, 273
Tsp45I GTSAC 4 cut(s) 602, 1510, 1946, 3093
TspDTI ATGAA 7 cut(s) 1119, 1556, 1835, 1942, 1985, 2502, 2591
TspGWI ACGGA 1 cut(s) 2676
TspRI CASTG 3 cut(s) 1067, 2437, 2970
Van91I CCANNNNNTGG 1 cut(s) 3020
Vha464I CTTAAG 1 cut(s) 1882
VpaK11BI GGWCC 2 cut(s) 1352, 1561
VspI ATTAAT 1 cut(s) 2666
XbaI TCTAGA 4 cut(s) 479, 1081, 1516, 2185
XceI RCATGY 3 cut(s) 535, 3072, 3206
XhoI CTCGAG 2 cut(s) 1906, 1924
XmiI GTMKAC 3 cut(s) 1930, 2235, 3207
XspI CTAG 6 cut(s) 480, 831, 1041, 1082, 1517, 2186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.