Rmu_sc0001218.1_g000019

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001218.1
Physical Location & Seq
Forward (+)
96222 .. 99425
3204 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001218.1_g000019.1.cds

Sequence Viewer

Length: 3204 bp
atgcccactctgttcctccatttcttccttttcttattcaccaccactgttactaacctcatccccgcagttcacagcaactgtattgaaccccagaaacaatcattgctccatttcaagaaaagtcttgaatttgattcttccgaatcctccaagcttatcacatggaattcgagtaccgactgctgttcttgggtcggtgtaaattgcagcaccaatgggcgtgttgtcggacttgacctcagcggagagtatttctcatgcaacattgacaattccagcagactgttccaacttcaacatcttcagagcctcaatttagcctataaccacttccatggctctgcaattccatctgcaattggaaagcttgcaaatttgaggtatttgaatttaagtgcagctgatttttctgggcaaattcccattgaggttgcacgcttgaaaaggttggtagtttttgatctctcagtttgggagttaaaacttgagaacccgaatttaggcactttaatccagaaccttacagagcttactgagttaaatcttcgtggtgtaaacctatcagctgagggatctcagtggggccaaaccatatcatcttcacttccaaagctacgtgtgttgaccttatcctattgtgatctttcaggccctattcatgaatcattggccaggcttcattctctatccacgttaatattggatcacaaccacgtctctagtccagttccaaaattctttgccaatttttcaagcttgatttccgtgagtctctctgattgtaacttgtatggagcatttcccaaagagatattccagataccttcactacagtttgttgtcctatcagataattcagagcttcgtggttccttaccggagtttccaaagaatggatctctagaattcctagtccttagcagcactaaattttcaggagtcttgccggactctattggcaaccttaaaatgctgtctgaattggatcttagagaatgcaatttcacaggagcagttccaaagtcattggccaacctaacacaattggggcatttgtacttgtcatccaacaagttttctagtccgattaattctattcaatgggacaaactcatcaagcttgagtatctcgacttgtccgacaatctactctacgggagtattccattgtctcccttctctattcccttgctcagcctgtttgatctttctggaaatcacttctctggtcagttgcttgaattttctaatgtctcttcgtacttgctgtacgaacttgatttgagtaacaacaatttggaaggatcaatacccctttctatctttaatctttcgatgcttggttcctttaacctttcttcaaacaacttgagcggttttcctttttatggccttcaggagtcgagaaatctttcgtctcttgatctatccttcaattgcttgttgttcaatcataatggtaccaactcatcactgcactccccccagatacagaagctgaatttggcttctaacaagttgaaaacattcccaagtttcctgaaaaatcaatcttatttaaccaacttgaacctttcagacaaccagattcaaggtcagatacccaattggatttgggagcttcatctcaagaatctatatctatgttgtaacaagttggtaagtctagaagctcctttacttggttctacttaccatctgaagaatcttgatcttcactcaaaccagattcagggacaaatatcattgtttctaagtggtagttatttggattactcaggaaataatttcagctctagtataccaactaacattggtgatttcatttctcccacgggctacctttctctttcaagcagtaaattatatggggaaattccaaaatcaatatgcaatgcaagtaatgtaattcttgatctctctaataactctttgagtggaaccattccccactgcttggctcagagttctctttctgtcgttgatttgaggggaaacaaccttactggatctatccccgatacttttcttgaaggttgtggtttggttactctagctctgggcagaaatcagatacaaggtcaatttccaaaatctctaaccaattgttcaatcttagaggttttagaccttggaatcaatcagataacagatgcctttccttgtccgttgaagagcatatccaccttgcgtgtccttgtgttgcgatccaacaaattttatggacctattggatgtcccgagaccaaagacacctggctgaagcttcaaatcatagacttggctaataacagtttcaatggtgaaataccaggtacattattgacaacatggcaggcaatggtggttaatgaagatggttaccaaattcaccatagctatacgtgggcaccaccgggaagtgcggtcaatccttgttataggaagttcagtcctaatgcaccaccaggtagcatactttcagacctgtgcttcagggttccaagtcctaatgagagctatcttgattatggagatgcagtaacagctacaagcaaaggtctagagatggatcttgtatatattttatttatcttcacttcgattgacttctctgctaacaagttcaatggaacaatacccaaggaaatgggccaactgagatcattacgtgtcctcaatctgtccagtaatgctttcacaggcgaaatcccatcatcctttggtaacataaaaagcatagagtccttagacctctcacagaaccacctgagcggccaaattccaccgcagcttgcaaatctcaatttcctttcgtacttgaatgtctcatataatcaactgacaggaagaatcccaaccagcactcagttttcaacatttccaaatacctccttcgagggtaacaaaggattatgggggcctcctctgacatgggatacaaaagtcgtatcgccacctccaacgttaaatggaagctcaagtaatccgaattctggagatgagattgattggaatgttatcagtgctgaaattggatttacatgtgggtttggaattgccgtcgggtcacttttgttttgcaagagatggaggaaatggtattacagagctatgtttaaaatcctgttcaagatattccctcagctggaacacagatttggtaatcacagaaggcatgtttacataaatcaaaggtattggaaccgtttaaatggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1067

Amino Acids

118.16

Weight (kDa)

6.32

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1463
AccB1I GGYRCC 2 cut(s) 1463, 2392
AccB7I CCANNNNNTGG 2 cut(s) 896, 1960
AccBSI CCGCTC 2 cut(s) 1377, 2757
AccI GTMKAC 1 cut(s) 1804
AciI CCGC 6 cut(s) 66, 246, 1377, 2408, 2757, 2771
AclI AACGTT 1 cut(s) 2948
AclWI GGATC 8 cut(s) 583, 714, 907, 996, 1315, 2020, 2205, 2562
AcoI YGGCCR 3 cut(s) 672, 1032, 2758
AcuI CTGAAG 5 cut(s) 290, 1382, 1724, 2285, 2461
AfaI GTAC 7 cut(s) 178, 1061, 1265, 1274, 1465, 2320, 2801
AfiI CCNNNNNNNGG 8 cut(s) 503, 896, 1391, 1685, 1735, 1960, 2978, 3130
AflIII ACRYGT 3 cut(s) 619, 2653, 3026
AjiI CACGTC 1 cut(s) 718
AjnI CCWGG 4 cut(s) 674, 2258, 2314, 2449
AjuI GAANNNNNNNTTGG 6 cut(s) 800, 832, 1490, 1522, 3126, 3158
Alw26I GTCTC 7 cut(s) 724, 779, 1179, 1261, 1425, 2240, 2815
AlwI GGATC 8 cut(s) 583, 714, 907, 996, 1315, 2020, 2205, 2562
AlwNI CAGNNNCTG 2 cut(s) 81, 1501
Ama87I CYCGRG 1 cut(s) 2243
AoxI GGCC 8 cut(s) 586, 652, 672, 1032, 1393, 2635, 2758, 2903
ApeKI GCWGC 4 cut(s) 210, 401, 924, 2773
AseI ATTAAT 1 cut(s) 1092
Asp700I GAANNNNTTC 2 cut(s) 1414, 1529
Asp718I GGTACC 1 cut(s) 1463
AspS9I GGNCC 5 cut(s) 586, 653, 2228, 2635, 2903
AsuC2I CCSGG 1 cut(s) 2400
AsuHPI GGTGA 4 cut(s) 31, 1832, 2318, 2366
AvaI CYCGRG 1 cut(s) 2243
AvaII GGWCC 1 cut(s) 2228
BaeGI GKGCMC 1 cut(s) 2395
BaeI ACNNNNGTAYC 2 cut(s) 2913, 2946
BalI TGGCCA 2 cut(s) 674, 1034
BanI GGYRCC 2 cut(s) 1463, 2392
BarI GAAGNNNNNNTAC 4 cut(s) 1296, 1328, 1665, 1697
BbvCI CCTCAGC 3 cut(s) 242, 570, 3126
BbvI GCAGC 4 cut(s) 222, 413, 936, 2785
BccI CCATC 6 cut(s) 361, 1707, 2354, 2545, 2704, 3066
BceAI ACGGC 1 cut(s) 3029
BciT130I CCWGG 4 cut(s) 676, 2260, 2316, 2451
BciVI GTATCC 1 cut(s) 2914
BcnI CCSGG 1 cut(s) 2400
BcoDI GTCTC 7 cut(s) 724, 779, 1179, 1261, 1425, 2240, 2815
BfaI CTAG 8 cut(s) 723, 905, 914, 1083, 1670, 1800, 2057, 2546
BfmI CTRYAG 1 cut(s) 833
BfuI GTATCC 1 cut(s) 2914
BisI GCNGC 5 cut(s) 211, 402, 925, 2758, 2774
BlpI GCTNAGC 1 cut(s) 1196
BlsI GCNGC 5 cut(s) 212, 403, 926, 2759, 2775
Bme1390I CCNGG 5 cut(s) 676, 2260, 2316, 2400, 2451
Bme18I GGWCC 1 cut(s) 2228
BmeT110I CYCGRG 1 cut(s) 2243
BmgBI CACGTC 1 cut(s) 718
BmgT120I GGNCC 5 cut(s) 586, 653, 2228, 2635, 2903
BmiI GGNNCC 9 cut(s) 587, 874, 1348, 1465, 1945, 2394, 2484, 2904, 3188
BmrFI CCNGG 5 cut(s) 676, 2260, 2316, 2400, 2451
BmsI GCATC 3 cut(s) 1329, 2146, 2509
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 3000
Bpu10I CCTNAGC 5 cut(s) 242, 570, 920, 2753, 3126
Bpu1102I GCTNAGC 1 cut(s) 1196
BpuEI CTTGAG 5 cut(s) 509, 1145, 1393, 1616, 2947
BpuMI CCSGG 1 cut(s) 2400
BsaAI YACGTR 3 cut(s) 620, 2388, 2654
BsaI GGTCTC 1 cut(s) 2240
BsaJI CCNNGG 4 cut(s) 337, 1836, 2134, 2625
BsaWI WCCGGW 1 cut(s) 880
BsaXI ACNNNNNCTCC 2 cut(s) 2508, 2538
Bsc4I CCNNNNNNNGG 8 cut(s) 503, 896, 1391, 1685, 1735, 1960, 2978, 3130
Bse1I ACTGG 3 cut(s) 728, 2014, 2670
Bse3DI GCAATG 3 cut(s) 104, 1903, 2349
BseBI CCWGG 4 cut(s) 676, 2260, 2316, 2451
BseDI CCNNGG 4 cut(s) 337, 1836, 2134, 2625
BseGI GGATG 4 cut(s) 60, 1067, 2243, 2699
BseLI CCNNNNNNNGG 8 cut(s) 503, 896, 1391, 1685, 1735, 1960, 2978, 3130
BseMI GCAATG 3 cut(s) 104, 1903, 2349
BseNI ACTGG 3 cut(s) 728, 2014, 2670
BseRI GAGGAG 1 cut(s) 2898
BseSI GKGCMC 1 cut(s) 2395
BseXI GCAGC 4 cut(s) 222, 413, 936, 2785
BsgI GTGCAG 2 cut(s) 420, 1463
BshFI GGCC 8 cut(s) 588, 654, 674, 1034, 1395, 2637, 2760, 2905
BshNI GGYRCC 2 cut(s) 1463, 2392
BsiHKCI CYCGRG 1 cut(s) 2243
BsiSI CCGG 3 cut(s) 881, 950, 2399
BslFI GGGAC 3 cut(s) 1121, 1752, 2226
BslI CCNNNNNNNGG 8 cut(s) 503, 896, 1391, 1685, 1735, 1960, 2978, 3130
BsmAI GTCTC 7 cut(s) 724, 779, 1179, 1261, 1425, 2240, 2815
BsmBI CGTCTC 2 cut(s) 724, 1425
BsmFI GGGAC 3 cut(s) 1121, 1752, 2226
BsmI GAATGC 1 cut(s) 1004
BsnI GGCC 8 cut(s) 588, 654, 674, 1034, 1395, 2637, 2760, 2905
Bso31I GGTCTC 1 cut(s) 2240
BsoBI CYCGRG 1 cut(s) 2243
Bsp1286I GDGCHC 1 cut(s) 2395
Bsp1720I GCTNAGC 1 cut(s) 1196
Bsp19I CCATGG 1 cut(s) 337
BspACI CCGC 6 cut(s) 66, 246, 1377, 2408, 2757, 2771
BspANI GGCC 8 cut(s) 588, 654, 674, 1034, 1395, 2637, 2760, 2905
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 9 cut(s) 587, 874, 1348, 1465, 1945, 2394, 2484, 2904, 3188
BspPI GGATC 8 cut(s) 583, 714, 907, 996, 1315, 2020, 2205, 2562
BspQI GCTCTTC 1 cut(s) 2171
BspT107I GGYRCC 2 cut(s) 1463, 2392
BspTNI GGTCTC 1 cut(s) 2240
BsrBI CCGCTC 2 cut(s) 1377, 2757
BsrDI GCAATG 3 cut(s) 104, 1903, 2349
BsrI ACTGG 3 cut(s) 728, 2014, 2670
BssECI CCNNGG 4 cut(s) 337, 1836, 2134, 2625
BssNAI GTATAC 1 cut(s) 1805
BssT1I CCWWGG 3 cut(s) 337, 2134, 2625
Bst1107I GTATAC 1 cut(s) 1805
Bst2UI CCWGG 4 cut(s) 676, 2260, 2316, 2451
Bst4CI ACNGT 6 cut(s) 49, 83, 288, 837, 2297, 3191
Bst6I CTCTTC 2 cut(s) 1264, 2171
BstBAI YACGTR 3 cut(s) 620, 2388, 2654
BstC8I GCNNGC 4 cut(s) 372, 439, 2340, 2778
BstDSI CCRYGG 2 cut(s) 337, 1836
BstEII GGTNACC 1 cut(s) 2363
BstF5I GGATG 4 cut(s) 60, 1067, 2243, 2699
BstMAI GTCTC 7 cut(s) 724, 779, 1179, 1261, 1425, 2240, 2815
BstMWI GCNNNNNNNGC 1 cut(s) 2528
BstNI CCWGG 4 cut(s) 676, 2260, 2316, 2451
BstNSI RCATGY 2 cut(s) 3030, 3164
BstPI GGTNACC 1 cut(s) 2363
BstSCI CCNGG 5 cut(s) 674, 2258, 2314, 2398, 2449
BstSFI CTRYAG 1 cut(s) 833
BstSLI GKGCMC 1 cut(s) 2395
BstV1I GCAGC 4 cut(s) 222, 413, 936, 2785
BstX2I RGATCY 5 cut(s) 575, 899, 988, 2012, 2554
BstXI CCANNNNNNTGG 2 cut(s) 338, 2632
BstYI RGATCY 5 cut(s) 575, 899, 988, 2012, 2554
BstZ17I GTATAC 1 cut(s) 1805
BsuI GTATCC 1 cut(s) 2914
BsuRI GGCC 8 cut(s) 588, 654, 674, 1034, 1395, 2637, 2760, 2905
BtgI CCRYGG 2 cut(s) 337, 1836
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 4 cut(s) 60, 1067, 2243, 2699
BtsI GCAGTG 2 cut(s) 1475, 1954
BtsIMutI CAGTG 5 cut(s) 45, 587, 1475, 1954, 3013
Cac8I GCNNGC 4 cut(s) 372, 439, 2340, 2778
CaiI CAGNNNCTG 2 cut(s) 81, 1501
CciI TCATGA 1 cut(s) 661
Cfr13I GGNCC 5 cut(s) 586, 653, 2228, 2635, 2903
CsiI ACCWGGT 2 cut(s) 2314, 2449
Csp6I GTAC 7 cut(s) 177, 1060, 1264, 1273, 1464, 2319, 2800
CviAII CATG 8 cut(s) 165, 261, 338, 662, 2334, 2916, 3027, 3161
CviQI GTAC 7 cut(s) 177, 1060, 1264, 1273, 1464, 2319, 2800
DraI TTTAAA 2 cut(s) 3103, 3195
EaeI YGGCCR 3 cut(s) 672, 1032, 2758
Eam1104I CTCTTC 2 cut(s) 1264, 2171
EarI CTCTTC 2 cut(s) 1264, 2171
Eco130I CCWWGG 3 cut(s) 337, 2134, 2625
Eco31I GGTCTC 1 cut(s) 2240
Eco47I GGWCC 1 cut(s) 2228
Eco57I CTGAAG 5 cut(s) 290, 1382, 1724, 2285, 2461
Eco88I CYCGRG 1 cut(s) 2243
Eco91I GGTNACC 1 cut(s) 2363
EcoO109I RGGNCCY 2 cut(s) 653, 2903
EcoO65I GGTNACC 1 cut(s) 2363
EcoRI GAATTC 3 cut(s) 169, 908, 2974
EcoRII CCWGG 4 cut(s) 674, 2258, 2314, 2449
EcoT14I CCWWGG 3 cut(s) 337, 2134, 2625
ErhI CCWWGG 3 cut(s) 337, 2134, 2625
Esp3I CGTCTC 2 cut(s) 724, 1425
FaeI CATG 8 cut(s) 168, 264, 341, 665, 2337, 2919, 3030, 3164
FaqI GGGAC 3 cut(s) 1121, 1752, 2226
FatI CATG 8 cut(s) 164, 260, 337, 661, 2333, 2915, 3026, 3160
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 1 cut(s) 1804
Fnu4HI GCNGC 5 cut(s) 211, 402, 925, 2758, 2774
FokI GGATG 4 cut(s) 47, 1054, 2250, 2686
Fsp4HI GCNGC 5 cut(s) 211, 402, 925, 2758, 2774
FspBI CTAG 8 cut(s) 723, 905, 914, 1083, 1670, 1800, 2057, 2546
GluI GCNGC 5 cut(s) 211, 402, 925, 2758, 2774
GsuI CTGGAG 1 cut(s) 3000
HaeIII GGCC 8 cut(s) 588, 654, 674, 1034, 1395, 2637, 2760, 2905
HapII CCGG 3 cut(s) 881, 950, 2399
Hin1II CATG 8 cut(s) 168, 264, 341, 665, 2337, 2919, 3030, 3164
HincII GTYRAC 1 cut(s) 627
HindII GTYRAC 1 cut(s) 627
HindIII AAGCTT 5 cut(s) 155, 368, 757, 1121, 2267
HpaII CCGG 3 cut(s) 881, 950, 2399
HphI GGTGA 4 cut(s) 31, 1832, 2318, 2366
Hpy166II GTNNAC 5 cut(s) 73, 559, 627, 1805, 3166
Hpy8I GTNNAC 5 cut(s) 73, 559, 627, 1805, 3166
Hpy99I CGWCG 1 cut(s) 3050
HpyAV CCTTC 8 cut(s) 837, 1189, 1298, 1406, 1444, 2030, 2887, 3150
HpyCH4III ACNGT 6 cut(s) 49, 83, 288, 837, 2297, 3191
HpyCH4IV ACGT 6 cut(s) 619, 695, 717, 2387, 2653, 2948
HpyF10VI GCNNNNNNNGC 1 cut(s) 2528
HpySE526I ACGT 6 cut(s) 619, 695, 717, 2387, 2653, 2948
Hsp92II CATG 8 cut(s) 168, 264, 341, 665, 2337, 2919, 3030, 3164
KpnI GGTACC 1 cut(s) 1467
LguI GCTCTTC 1 cut(s) 2171
LmnI GCTCC 5 cut(s) 114, 797, 1013, 1621, 1681
Lsp1109I GCAGC 4 cut(s) 222, 413, 936, 2785
LweI GCATC 3 cut(s) 1329, 2146, 2509
MabI ACCWGGT 2 cut(s) 2314, 2449
MaeI CTAG 8 cut(s) 723, 905, 914, 1083, 1670, 1800, 2057, 2546
MaeII ACGT 6 cut(s) 619, 695, 717, 2387, 2653, 2948
MbiI CCGCTC 2 cut(s) 1377, 2757
MfeI CAATTG 5 cut(s) 360, 1046, 1438, 1609, 2107
MflI RGATCY 5 cut(s) 575, 899, 988, 2012, 2554
MhlI GDGCHC 1 cut(s) 2395
MlsI TGGCCA 2 cut(s) 674, 1034
MluNI TGGCCA 2 cut(s) 674, 1034
MlyI GAGTC 5 cut(s) 781, 947, 951, 1412, 2735
MmeI TCCRAC 6 cut(s) 211, 316, 1095, 1167, 2238, 2969
Mox20I TGGCCA 2 cut(s) 674, 1034
MroXI GAANNNNTTC 2 cut(s) 1414, 1529
MscI TGGCCA 2 cut(s) 674, 1034
MslI CAYNNNNRTG 1 cut(s) 336
Msp20I TGGCCA 2 cut(s) 674, 1034
MspA1I CMGCKG 4 cut(s) 246, 404, 569, 3130
MspI CCGG 3 cut(s) 881, 950, 2399
MspR9I CCNGG 5 cut(s) 676, 2260, 2316, 2400, 2451
MunI CAATTG 5 cut(s) 360, 1046, 1438, 1609, 2107
Mva1269I GAATGC 1 cut(s) 1004
MvaI CCWGG 4 cut(s) 676, 2260, 2316, 2451
MwoI GCNNNNNNNGC 1 cut(s) 2528
NciI CCSGG 1 cut(s) 2400
NcoI CCATGG 1 cut(s) 337
NlaIII CATG 8 cut(s) 168, 264, 341, 665, 2337, 2919, 3030, 3164
NlaIV GGNNCC 9 cut(s) 587, 874, 1348, 1465, 1945, 2394, 2484, 2904, 3188
NmuCI GTSAC 1 cut(s) 3051
NspI RCATGY 2 cut(s) 3030, 3164
PagI TCATGA 1 cut(s) 661
PciI ACATGT 1 cut(s) 3026
PciSI GCTCTTC 1 cut(s) 2171
PcsI WCGNNNNNNNCGW 1 cut(s) 1140
PctI GAATGC 1 cut(s) 1004
PdmI GAANNNNTTC 2 cut(s) 1414, 1529
PfeI GAWTC 9 cut(s) 137, 146, 665, 1591, 1636, 1708, 1732, 2139, 2835
PflMI CCANNNNNTGG 2 cut(s) 896, 1960
PkrI GCNGC 5 cut(s) 212, 403, 926, 2759, 2775
PleI GAGTC 5 cut(s) 780, 947, 950, 1411, 2734
PpsI GAGTC 5 cut(s) 780, 947, 950, 1411, 2734
Ppu21I YACGTR 3 cut(s) 620, 2388, 2654
PscI ACATGT 1 cut(s) 3026
PshBI ATTAAT 1 cut(s) 1092
Psp1406I AACGTT 1 cut(s) 2948
Psp6I CCWGG 4 cut(s) 674, 2258, 2314, 2449
PspEI GGTNACC 1 cut(s) 2363
PspGI CCWGG 4 cut(s) 674, 2258, 2314, 2449
PspN4I GGNNCC 9 cut(s) 587, 874, 1348, 1465, 1945, 2394, 2484, 2904, 3188
PspPI GGNCC 5 cut(s) 586, 653, 2228, 2635, 2903
PstNI CAGNNNCTG 2 cut(s) 81, 1501
PsuI RGATCY 5 cut(s) 575, 899, 988, 2012, 2554
PvuII CAGCTG 3 cut(s) 404, 569, 3130
RsaI GTAC 7 cut(s) 178, 1061, 1265, 1274, 1465, 2320, 2801
RsaNI GTAC 7 cut(s) 177, 1060, 1264, 1273, 1464, 2319, 2800
RseI CAYNNNNRTG 1 cut(s) 336
SapI GCTCTTC 1 cut(s) 2171
SatI GCNGC 5 cut(s) 211, 402, 925, 2758, 2774
Sau96I GGNCC 5 cut(s) 586, 653, 2228, 2635, 2903
SchI GAGTC 5 cut(s) 781, 947, 951, 1412, 2735
ScrFI CCNGG 5 cut(s) 676, 2260, 2316, 2400, 2451
SduI GDGCHC 1 cut(s) 2395
SexAI ACCWGGT 2 cut(s) 2314, 2449
SfaNI GCATC 3 cut(s) 1329, 2146, 2509
SfcI CTRYAG 1 cut(s) 833
SinI GGWCC 1 cut(s) 2228
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 5 cut(s) 488, 1124, 1372, 1631, 2962
SmoI CTYRAG 5 cut(s) 488, 1124, 1372, 1631, 2962
SsiI CCGC 6 cut(s) 66, 246, 1377, 2408, 2757, 2771
SspI AATATT 1 cut(s) 702
SspMI CTAG 8 cut(s) 723, 905, 914, 1083, 1670, 1800, 2057, 2546
StyD4I CCNGG 5 cut(s) 674, 2258, 2314, 2398, 2449
StyI CCWWGG 3 cut(s) 337, 2134, 2625
TaaI ACNGT 6 cut(s) 49, 83, 288, 837, 2297, 3191
TaiI ACGT 6 cut(s) 622, 698, 720, 2390, 2656, 2951
TaqI TCGA 6 cut(s) 173, 1134, 1337, 1406, 2585, 2880
TatI WGTACW 1 cut(s) 1059
TauI GCSGC 1 cut(s) 2760
TfiI GAWTC 9 cut(s) 137, 146, 665, 1591, 1636, 1708, 1732, 2139, 2835
TscAI CASTG 5 cut(s) 52, 587, 1482, 1961, 3013
TseFI GTSAC 1 cut(s) 3051
TseI GCWGC 4 cut(s) 210, 401, 924, 2773
Tsp45I GTSAC 1 cut(s) 3051
TspDTI ATGAA 6 cut(s) 650, 671, 678, 1616, 1816, 2370
TspGWI ACGGA 2 cut(s) 757, 2160
TspRI CASTG 5 cut(s) 52, 587, 1482, 1961, 3013
Van91I CCANNNNNTGG 2 cut(s) 896, 1960
VpaK11BI GGWCC 1 cut(s) 2228
VspI ATTAAT 1 cut(s) 1092
XbaI TCTAGA 3 cut(s) 904, 1669, 2545
XceI RCATGY 2 cut(s) 3030, 3164
XcmI CCANNNNNNNNNTGG 1 cut(s) 700
XmiI GTMKAC 1 cut(s) 1804
XmnI GAANNNNTTC 2 cut(s) 1414, 1529
XspI CTAG 8 cut(s) 723, 905, 914, 1083, 1670, 1800, 2057, 2546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.