FvH4_6g21370

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Forward (+)
14941608 .. 14945194
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g21370.t1

Sequence Viewer

Length: 3120 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCTTGATCACCACCAGTGTTACTAACCTCATTCCCACAGTTCACAGCAACTGTATTCAAGCCCAAAAACAATCGTTGCTCCATTTCAAGGAAAGTCTTGTATTTGATTCTTCTTCTTCCTCCAAGCTTATCACATGGAATTCGAGTACCGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCAGTAACGGGCGTGTTGTCGGACTTGACCTCAGCAGTGAGTCTATCTCATGCAGCATTGACAATTCAAGCAGTCTCTTCCAACTTGAACATCTTCAGAGCCTCAATTTGGCCGATAACAGCTTCAATGATTCTTCCATTCCATCTGCAATCGGAAAGCTTGCAGATTTGAGGTATCTGAATTTATCCTCTACTTATTTTTCTGGGCAGATTCCCATTGAGGTTGCACGCTTAACAAGGCTGGTAACTCTTGATCTCTCTGATCAAGTTTACTCGTCGTTCGAAGTTGAGAACCCGAATTTAAGCATGTTATTTCAAAACCTCACAGAGCTTACAGAGTTATATTTTGATATATCACTAAACTTATCAGCACAGGGGAGTGACTGGTGTGAGGCCATATCATCTTCACTTCCAAATCTGAGGGCGTTGGGATTGTATGGCTGTGGTCTTCGAGGCCCTATTTGTGAGTCCCTAGCAAACCTTCAATCTCTGTCTGAGATTCAATTGGGTCATAACTCCTTTCATGCTCCCGTTCCAAAAGGCTTTGCCAATCTTTCAAAATTGACATACTTGGACCTTCAGGGTTCTAACTTGCTTGGAACATTTCCAAAAGAGATCTTTCAGATACCTTCCCTACAAACCATTGACCTTTCTGATAATGTTGATCTTCATGGTTCCTTTCCAGAATTTCCAAACAATGGCTCTCTTCGATCCTTAATTGTAGATAAGACGAGCTTTTCAGGTGAGCTACCCAACTCTATTGGAAATCTTAAAATGCTGTCAAGCATAGATCTTTCAGGTTGCAATTTCACTGGATCACTTCCCAAGTCGATTGAAAACCTCACACAGTTGAATGATCTGCTATTGTCAGGGAATAGATTTAAGAGTCCCATTAGTTATATCCACTGGGAAACCCTTGTTAATCTGGGGAGGCTTGACTTGAGCAACAATCAACTCTATGGGACTATTCCATCATCCATTGTTTCTCTTTCCAAGCTGGTATTTTTGACACTGTCCAACAATCGGTTCTCTGGTCAAGTCCCTAAAGTTTCCAATACCTCTTCTTACTTACTTATTAGCCTTGATTTGGGAAACAACAATTTGGAAGGACAAATACCCAATTGGATTTTCAATCTCAAATCTCTTAATGGCCTTGATCTTGCTTACAACTCCTTGGCCACTCTAGAAGCTCCTCTTCCTAATTCTACTTCTGTTTTATCTTCTCTCTACCTCCGTTCCAATAAGCTTGAGGGTATCCCTTCCTCATACTCATTCCTTCAGCTTGACTTTGTGTCATTAGCTTCTAACAAGTTGACAACATTCCCAGACTTCTTGAGAAATCAATCGATGTTAACAACCTTGGACCTCTCAGACAACCAAATTCAAGGCCAGATACCCAATTGGACTTGGAGGCTCATTTCTCTTGATTATTATGGTGTTCTTATAAATCTTTCACGCAACTCCTTCGAAACTTTCGAACCTCCTCCACCTAATTCTACTTATGTTGTGACTTCACTTGATCTTCATTCAAACCGGCTTCAGGGACAGATACCATTGTTCTTGAGTGGTGATTACTTGGATTACTCGGGAAATAATTTCAACTCTACTATACCAACTGACATCGGAGATTTCATTCATGCTGGGTTTTACCTTTCCTTTTCAAGCAATAACTTACATGGGTCCATTCCAAATTCAATATGCAACGCAAGTGGTTTAGTTCTTGATCTGTCTAATAATTCCTTGAGTGGAGACATACCCCAATGCTTAACTCAAAAAGGTTCCCCCCGTTCGCGTTCAGTCCTTAATTTGAGCAGAAACAAGCTTACTGGAACTATCCCAGATAAGTTCCAAGAAGGTTGTGAATTAGAAACGCTTGACCTTAGCAGAAATCAGATACAAGGGCAGTTTCCGAAATCACTCGTCCACTGCTCAAGTTTGGTGGTTTTAAACCTCGGAAACAATTACATCACAGATTCATTTCCATGCGGTTTGATGAACATATCCACCTTGCATGTCCTTGTTTTGCAGTCCAACAAGTTTTATGGAAGCATTGGATGTCCAAACACCAATGACACATGGTCTGTGCTTCAAGTAATAGATTTGGCTCATAACAACTTCAGTGGTGATATGCCGGGAAGAATGTTATTGATGTGGAAGGCTATGATGTCTAATACGGATGATTCTCCAACTACCCTTGGATATTCTAATCCACAGGACGGACCAACTACTCCTCAAGTTTATTATGCAGATGCAATTACGACTATCATCAAAGGCTTAGAGTTCCATCTGGTAAAAATTCCAAACATATTCACCTTGATTGACTTCTCCTCAAACAAATTCAACGGATCGATACCTGAGGAAATCGGAGAGTTGAAATCACTCTATGTTCTCAACTTGTCCAATAATGCTTTCACAGGGAGAATCCCATCATCATTTGGTCAGATGCAACAATTGGAGTCCTTAGATCTCTCAAACAACCAACTGAGTGGCACAATTCCACAACAGATGGCAAAACTCAGTTTCCTTGCTGTCTTGGATCTCTCAAATAATCAACTGGTTGGGAGAATCCCCACCGGTACTCAGTTTTCTACATTTCCACGTACCTCATTCGAAGGTAACAAAGGATTATCGGGGCCTCCTTTGACAACGGATGCATTGTTGCCGCCACCAACTTCAAATGGAAGCTTGAGACCTCCGAGTTCTGGAAATGAGATTGACTGGAATATTATCTCTGCTGAAATTGGATTTACATGTGGGTTTGGACTTGCCGTTGGGTCACTTTTGTTTTGCAAAAGATGGAGGAAATGGTATTTCAGAGCGATGCGTAGTGTTCTTTTCAAGATATTTCCTCAGCTGGAGCAGAGGTTTGGTATTCATAGAAGACATGTTTACATAAACACAAGTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1040

Amino Acids

114.37

Weight (kDa)

5.39

Isoelectric Point (pI)

35.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 2.9e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 189 6.1e-09 Leucine-rich repeat region
LRR_8 PF13855 233 - 290 2.7e-07 Leucine rich repeat
LRR_14 PF23598 305 - 360 1.7e-06 Leucine-rich repeat region
LRR_8 PF13855 670 - 726 7.6e-09 Leucine rich repeat
LRR_8 PF13855 691 - 750 2.4e-07 Leucine rich repeat
LRR_4 PF12799 691 - 728 7.9e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 852 - 919 2e-07 Leucine-rich repeat region
LRR_8 PF13855 863 - 922 4.8e-10 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1655
AccB7I CCANNNNNTGG 1 cut(s) 908
AccII CGCG 1 cut(s) 2002
AciI CCGC 2 cut(s) 2196, 2873
AclWI GGATC 4 cut(s) 915, 1033, 2563, 2754
AcoI YGGCCR 2 cut(s) 321, 1386
AcsI RAATTY 8 cut(s) 169, 391, 508, 896, 1590, 1900, 2505, 2546
AcuI CTGAAG 5 cut(s) 290, 773, 1472, 1733, 2311
AfaI GTAC 3 cut(s) 178, 2788, 2812
AfiI CCNNNNNNNGG 8 cut(s) 118, 319, 908, 1233, 1297, 1750, 2426, 2912
AflIII ACRYGT 2 cut(s) 2960, 3094
AgeI ACCGGT 1 cut(s) 2783
AhdI GACNNNNNGTC 2 cut(s) 1501, 2287
AjuI GAANNNNNNNTTGG 6 cut(s) 1220, 1252, 1322, 1354, 2603, 2635
Alw26I GTCTC 3 cut(s) 290, 1953, 2893
AlwI GGATC 4 cut(s) 915, 1033, 2563, 2754
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 1795
AoxI GGCC 7 cut(s) 321, 603, 664, 1360, 1386, 1597, 2843
ApeKI GCWGC 2 cut(s) 210, 264
ApoI RAATTY 8 cut(s) 169, 391, 508, 896, 1590, 1900, 2505, 2546
AsiGI ACCGGT 1 cut(s) 2783
Asp700I GAANNNNTTC 1 cut(s) 303
AspS9I GGNCC 6 cut(s) 665, 784, 1573, 1890, 2429, 2843
AsuC2I CCSGG 1 cut(s) 2343
AsuHPI GGTGA 5 cut(s) 31, 965, 1790, 2345, 2512
AsuII TTCGAA 4 cut(s) 492, 1677, 1686, 2820
AvaI CYCGRG 1 cut(s) 1795
AvaII GGWCC 4 cut(s) 784, 1573, 1890, 2429
AxyI CCTNAGG 1 cut(s) 2565
BaeI ACNNNNGTAYC 2 cut(s) 1751, 1784
BalI TGGCCA 1 cut(s) 1388
BarI GAAGNNNNNNTAC 2 cut(s) 1308, 1340
BbsI GAAGAC 2 cut(s) 650, 3097
BbvCI CCTCAGC 2 cut(s) 242, 3060
BbvI GCAGC 2 cut(s) 222, 276
BccI CCATC 6 cut(s) 361, 1189, 2502, 2644, 2710, 3000
BceAI ACGGC 1 cut(s) 2963
BcgI CGANNNNNNTGC 2 cut(s) 1657, 1691
BciVI GTATCC 1 cut(s) 1475
BclI TGATCA 2 cut(s) 36, 472
BcnI CCSGG 1 cut(s) 2343
BcoDI GTCTC 3 cut(s) 290, 1953, 2893
BfaI CTAG 2 cut(s) 683, 1394
BfuI GTATCC 1 cut(s) 1475
BglII AGATCT 3 cut(s) 825, 1000, 2674
BisI GCNGC 3 cut(s) 211, 265, 2873
BlsI GCNGC 3 cut(s) 212, 266, 2874
Bme1390I CCNGG 1 cut(s) 2343
Bme18I GGWCC 4 cut(s) 784, 1573, 1890, 2429
BmeRI GACNNNNNGTC 2 cut(s) 1501, 2287
BmeT110I CYCGRG 1 cut(s) 1795
BmgT120I GGNCC 6 cut(s) 665, 784, 1573, 1890, 2429, 2843
BmiI GGNNCC 4 cut(s) 886, 1891, 1990, 2844
BmrFI CCNGG 1 cut(s) 2343
BmrI ACTGGG 1 cut(s) 1126
BmsI GCATC 4 cut(s) 2449, 2643, 2851, 3021
BmuI ACTGGG 1 cut(s) 1126
BpiI GAAGAC 2 cut(s) 650, 3097
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 3086
Bpu10I CCTNAGC 3 cut(s) 242, 2090, 3060
Bpu14I TTCGAA 4 cut(s) 492, 1677, 1686, 2820
BpuEI CTTGAG 8 cut(s) 1171, 1478, 1564, 1792, 1972, 2125, 2427, 2917
BpuMI CCSGG 1 cut(s) 2343
Bsa29I ATCGAT 2 cut(s) 1556, 2558
BsaAI YACGTR 1 cut(s) 2810
BsaI GGTCTC 1 cut(s) 2893
BsaJI CCNNGG 4 cut(s) 1383, 1569, 2161, 2404
BsaWI WCCGGW 1 cut(s) 2783
BsaXI ACNNNNNCTCC 2 cut(s) 3059, 3089
Bsc4I CCNNNNNNNGG 8 cut(s) 118, 319, 908, 1233, 1297, 1750, 2426, 2912
Bse118I RCCGGY 2 cut(s) 1743, 2783
Bse1I ACTGG 7 cut(s) 45, 599, 1027, 1121, 2041, 2769, 2933
Bse21I CCTNAGG 1 cut(s) 2565
BseCI ATCGAT 2 cut(s) 1556, 2558
BseDI CCNNGG 4 cut(s) 1383, 1569, 2161, 2404
BseGI GGATG 4 cut(s) 1184, 2270, 2392, 2866
BseLI CCNNNNNNNGG 8 cut(s) 118, 319, 908, 1233, 1297, 1750, 2426, 2912
BseMII CTCAG 9 cut(s) 256, 620, 696, 1593, 2556, 2684, 2740, 2804, 3074
BseNI ACTGG 7 cut(s) 45, 599, 1027, 1121, 2041, 2769, 2933
BseRI GAGGAG 4 cut(s) 1392, 1683, 2430, 2527
BseXI GCAGC 2 cut(s) 222, 276
BseYI CCCAGC 1 cut(s) 1850
Bsh1236I CGCG 1 cut(s) 2002
BshFI GGCC 7 cut(s) 323, 605, 666, 1362, 1388, 1599, 2845
BshTI ACCGGT 1 cut(s) 2783
BshVI ATCGAT 2 cut(s) 1556, 2558
BsiHKCI CYCGRG 1 cut(s) 1795
BsiSI CCGG 3 cut(s) 1744, 2342, 2784
BslFI GGGAC 5 cut(s) 664, 1083, 1186, 1235, 1767
BslI CCNNNNNNNGG 8 cut(s) 118, 319, 908, 1233, 1297, 1750, 2426, 2912
BsmAI GTCTC 3 cut(s) 290, 1953, 2893
BsmFI GGGAC 5 cut(s) 664, 1083, 1186, 1235, 1767
BsnI GGCC 7 cut(s) 323, 605, 666, 1362, 1388, 1599, 2845
Bso31I GGTCTC 1 cut(s) 2893
BsoBI CYCGRG 1 cut(s) 1795
Bsp119I TTCGAA 4 cut(s) 492, 1677, 1686, 2820
BspACI CCGC 2 cut(s) 2196, 2873
BspANI GGCC 7 cut(s) 323, 605, 666, 1362, 1388, 1599, 2845
BspCNI CTCAG 9 cut(s) 255, 621, 697, 1592, 2557, 2685, 2739, 2803, 3073
BspDI ATCGAT 2 cut(s) 1556, 2558
BspFNI CGCG 1 cut(s) 2002
BspLI GGNNCC 4 cut(s) 886, 1891, 1990, 2844
BspPI GGATC 4 cut(s) 915, 1033, 2563, 2754
BspT104I TTCGAA 4 cut(s) 492, 1677, 1686, 2820
BspTNI GGTCTC 1 cut(s) 2893
BsrFI RCCGGY 2 cut(s) 1743, 2783
BsrI ACTGG 7 cut(s) 45, 599, 1027, 1121, 2041, 2769, 2933
BssAI RCCGGY 2 cut(s) 1743, 2783
BssECI CCNNGG 4 cut(s) 1383, 1569, 2161, 2404
BssT1I CCWWGG 3 cut(s) 1383, 1569, 2404
Bst4CI ACNGT 4 cut(s) 70, 83, 1059, 1224
Bst6I CTCTTC 4 cut(s) 293, 921, 1276, 1410
BstBAI YACGTR 1 cut(s) 2810
BstBI TTCGAA 4 cut(s) 492, 1677, 1686, 2820
BstC8I GCNNGC 2 cut(s) 372, 439
BstF5I GGATG 4 cut(s) 1184, 2270, 2392, 2866
BstFNI CGCG 1 cut(s) 2002
BstMAI GTCTC 3 cut(s) 290, 1953, 2893
BstNSI RCATGY 4 cut(s) 520, 2225, 2964, 3098
BstSCI CCNGG 1 cut(s) 2341
BstUI CGCG 1 cut(s) 2002
BstV1I GCAGC 2 cut(s) 222, 276
BstV2I GAAGAC 2 cut(s) 650, 3097
BstX2I RGATCY 4 cut(s) 825, 1000, 2674, 2746
BstXI CCANNNNNNTGG 1 cut(s) 2696
BstYI RGATCY 4 cut(s) 825, 1000, 2674, 2746
Bsu15I ATCGAT 2 cut(s) 1556, 2558
Bsu36I CCTNAGG 1 cut(s) 2565
BsuI GTATCC 1 cut(s) 1475
BsuRI GGCC 7 cut(s) 323, 605, 666, 1362, 1388, 1599, 2845
BsuTUI ATCGAT 2 cut(s) 1556, 2558
BtgZI GCGATG 1 cut(s) 3044
BtsCI GGATG 4 cut(s) 1184, 2270, 2392, 2866
BtsI GCAGTG 2 cut(s) 253, 2134
BtsIMutI CAGTG 7 cut(s) 52, 253, 1020, 1114, 1220, 2134, 2335
Cac8I GCNNGC 2 cut(s) 372, 439
CaiI CAGNNNCTG 1 cut(s) 81
Cfr10I RCCGGY 2 cut(s) 1743, 2783
Cfr13I GGNCC 6 cut(s) 665, 784, 1573, 1890, 2429, 2843
ClaI ATCGAT 2 cut(s) 1556, 2558
Csp6I GTAC 3 cut(s) 177, 2787, 2811
CspAI ACCGGT 1 cut(s) 2783
CspCI CAANNNNNGTGG 6 cut(s) 1900, 1935, 2130, 2165, 2311, 2346
CviQI GTAC 3 cut(s) 177, 2787, 2811
DraI TTTAAA 1 cut(s) 2157
DriI GACNNNNNGTC 2 cut(s) 1501, 2287
EaeI YGGCCR 2 cut(s) 321, 1386
Eam1104I CTCTTC 4 cut(s) 293, 921, 1276, 1410
Eam1105I GACNNNNNGTC 2 cut(s) 1501, 2287
EarI CTCTTC 4 cut(s) 293, 921, 1276, 1410
Eco130I CCWWGG 3 cut(s) 1383, 1569, 2404
Eco31I GGTCTC 1 cut(s) 2893
Eco47I GGWCC 4 cut(s) 784, 1573, 1890, 2429
Eco57I CTGAAG 5 cut(s) 290, 773, 1472, 1733, 2311
Eco81I CCTNAGG 1 cut(s) 2565
Eco88I CYCGRG 1 cut(s) 1795
EcoO109I RGGNCCY 2 cut(s) 665, 2843
EcoRI GAATTC 1 cut(s) 169
EcoT14I CCWWGG 3 cut(s) 1383, 1569, 2404
EcoT22I ATGCAT 1 cut(s) 2866
ErhI CCWWGG 3 cut(s) 1383, 1569, 2404
FalI AAGNNNNNCTT 4 cut(s) 929, 961, 1389, 1421
FaqI GGGAC 5 cut(s) 664, 1083, 1186, 1235, 1767
FbaI TGATCA 2 cut(s) 36, 472
Fnu4HI GCNGC 3 cut(s) 211, 265, 2873
FokI GGATG 4 cut(s) 1171, 2277, 2399, 2873
Fsp4HI GCNGC 3 cut(s) 211, 265, 2873
FspBI CTAG 2 cut(s) 683, 1394
GluI GCNGC 3 cut(s) 211, 265, 2873
GsaI CCCAGC 1 cut(s) 1854
GsuI CTGGAG 1 cut(s) 3086
HaeIII GGCC 7 cut(s) 323, 605, 666, 1362, 1388, 1599, 2845
HapII CCGG 3 cut(s) 1744, 2342, 2784
HincII GTYRAC 2 cut(s) 1524, 1563
HindII GTYRAC 2 cut(s) 1524, 1563
HindIII AAGCTT 5 cut(s) 155, 368, 1454, 2030, 2893
HpaI GTTAAC 1 cut(s) 1563
HpaII CCGG 3 cut(s) 1744, 2342, 2784
HphI GGTGA 5 cut(s) 31, 965, 1790, 2345, 2512
Hpy166II GTNNAC 6 cut(s) 73, 481, 1524, 1563, 2134, 3100
Hpy8I GTNNAC 6 cut(s) 73, 481, 1524, 1563, 2134, 3100
Hpy99I CGWCG 1 cut(s) 490
HpyCH4III ACNGT 4 cut(s) 70, 83, 1059, 1224
HpyCH4IV ACGT 1 cut(s) 2809
HpySE526I ACGT 1 cut(s) 2809
Ksp22I TGATCA 2 cut(s) 36, 472
KspAI GTTAAC 1 cut(s) 1563
LmnI GCTCC 4 cut(s) 114, 742, 1405, 3067
Lsp1109I GCAGC 2 cut(s) 222, 276
LweI GCATC 4 cut(s) 2449, 2643, 2851, 3021
MaeI CTAG 2 cut(s) 683, 1394
MaeII ACGT 1 cut(s) 2809
MaeIII GTNAC 8 cut(s) 49, 202, 215, 454, 590, 1717, 2825, 2985
MfeI CAATTG 4 cut(s) 713, 1330, 1609, 2660
MflI RGATCY 4 cut(s) 825, 1000, 2674, 2746
MlsI TGGCCA 1 cut(s) 1388
MluNI TGGCCA 1 cut(s) 1388
MlyI GAGTC 4 cut(s) 260, 686, 1105, 2675
MmeI TCCRAC 5 cut(s) 211, 316, 1251, 2265, 2420
Mox20I TGGCCA 1 cut(s) 1388
Mph1103I ATGCAT 1 cut(s) 2866
MroXI GAANNNNTTC 1 cut(s) 303
MscI TGGCCA 1 cut(s) 1388
MslI CAYNNNNRTG 1 cut(s) 2191
Msp20I TGGCCA 1 cut(s) 1388
MspA1I CMGCKG 1 cut(s) 3064
MspI CCGG 3 cut(s) 1744, 2342, 2784
MspR9I CCNGG 1 cut(s) 2343
MunI CAATTG 4 cut(s) 713, 1330, 1609, 2660
MvnI CGCG 1 cut(s) 2002
NciI CCSGG 1 cut(s) 2343
NlaIV GGNNCC 4 cut(s) 886, 1891, 1990, 2844
NmuCI GTSAC 3 cut(s) 590, 1717, 2985
NsiI ATGCAT 1 cut(s) 2866
NspI RCATGY 4 cut(s) 520, 2225, 2964, 3098
NspV TTCGAA 4 cut(s) 492, 1677, 1686, 2820
PciI ACATGT 2 cut(s) 2960, 3094
PcsI WCGNNNNNNNCGW 1 cut(s) 1683
PdmI GAANNNNTTC 1 cut(s) 303
PfeI GAWTC 8 cut(s) 137, 341, 421, 709, 2183, 2390, 2631, 2775
PflFI GACNNNGTC 1 cut(s) 1222
PflMI CCANNNNNTGG 1 cut(s) 908
PinAI ACCGGT 1 cut(s) 2783
PkrI GCNGC 3 cut(s) 212, 266, 2874
PleI GAGTC 4 cut(s) 259, 685, 1104, 2674
PpsI GAGTC 4 cut(s) 259, 685, 1104, 2674
Ppu21I YACGTR 1 cut(s) 2810
PscI ACATGT 2 cut(s) 2960, 3094
PsiI TTATAA 1 cut(s) 1655
PspFI CCCAGC 1 cut(s) 1850
PspN4I GGNNCC 4 cut(s) 886, 1891, 1990, 2844
PspPI GGNCC 6 cut(s) 665, 784, 1573, 1890, 2429, 2843
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 4 cut(s) 825, 1000, 2674, 2746
PsyI GACNNNGTC 1 cut(s) 1222
PvuII CAGCTG 1 cut(s) 3064
RsaI GTAC 3 cut(s) 178, 2788, 2812
RsaNI GTAC 3 cut(s) 177, 2787, 2811
RseI CAYNNNNRTG 1 cut(s) 2191
SatI GCNGC 3 cut(s) 211, 265, 2873
Sau96I GGNCC 6 cut(s) 665, 784, 1573, 1890, 2429, 2843
SchI GAGTC 4 cut(s) 260, 686, 1105, 2675
ScrFI CCNGG 1 cut(s) 2343
SfaNI GCATC 4 cut(s) 2449, 2643, 2851, 3021
SfuI TTCGAA 4 cut(s) 492, 1677, 1686, 2820
SinI GGWCC 4 cut(s) 784, 1573, 1890, 2429
SmiMI CAYNNNNRTG 1 cut(s) 2191
SmlI CTYRAG 8 cut(s) 1150, 1457, 1543, 1771, 1951, 2140, 2442, 2896
SmoI CTYRAG 8 cut(s) 1150, 1457, 1543, 1771, 1951, 2140, 2442, 2896
SsiI CCGC 2 cut(s) 2196, 2873
SspI AATATT 1 cut(s) 2935
SspMI CTAG 2 cut(s) 683, 1394
StyD4I CCNGG 1 cut(s) 2341
StyI CCWWGG 3 cut(s) 1383, 1569, 2404
TaaI ACNGT 4 cut(s) 70, 83, 1059, 1224
TaiI ACGT 1 cut(s) 2812
TauI GCSGC 1 cut(s) 2875
TfiI GAWTC 8 cut(s) 137, 341, 421, 709, 2183, 2390, 2631, 2775
TscAI CASTG 7 cut(s) 52, 253, 1027, 1121, 1227, 2141, 2335
TseFI GTSAC 3 cut(s) 590, 1717, 2985
TseI GCWGC 2 cut(s) 210, 264
Tsp45I GTSAC 3 cut(s) 590, 1717, 2985
TspDTI ATGAA 8 cut(s) 722, 869, 1724, 1831, 1835, 2175, 2219, 3074
TspGWI ACGGA 5 cut(s) 1433, 2399, 2442, 2568, 2873
TspRI CASTG 7 cut(s) 52, 253, 1027, 1121, 1227, 2141, 2335
Tth111I GACNNNGTC 1 cut(s) 1222
Van91I CCANNNNNTGG 1 cut(s) 908
VpaK11BI GGWCC 4 cut(s) 784, 1573, 1890, 2429
XapI RAATTY 8 cut(s) 169, 391, 508, 896, 1590, 1900, 2505, 2546
XbaI TCTAGA 1 cut(s) 1393
XceI RCATGY 4 cut(s) 520, 2225, 2964, 3098
XmnI GAANNNNTTC 1 cut(s) 303
XspI CTAG 2 cut(s) 683, 1394
Zsp2I ATGCAT 1 cut(s) 2866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.