Rroxscaffold_4G00302030

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000047
Physical Location & Seq
Forward (+)
22390977 .. 22394361
3385 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00302030.1

Sequence Viewer

Length: 3045 bp
ATGAGTCACTGCGAGATAAGATTTGTTAACCGAAGCATGAATTCTCAGGGTCATTGTCGGCCCAGCCGTAATGGGCGTGTTCTGGGTCTTGACATAAGCAGCCAAGGTATCTCAGCTGGAATTGACAATGCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCGGACAACCAACTTGGCAATTACTCTCAATCAATTCCATCCGCCATAGGAGATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAATGATTATTCAGGGCAAATTCCCATCCAGATTTCTCGCTTGAGGAGGTTAGTAGTTCTTGATTTTTCTAACAATTATGGCCTTGGAAGTCCAAATTTACCCATGTTGGTTCACGACTTCACAGAGCTTAGAGAGTTATATCTTGATGGTGTCCTAATATCAGAACAGGGGATCAGTGAGTGGGGCCGAGCCATATCATCTTCCATTCCCAACCTCAGGGTCCTGAGCATGTTCAATTGTCATCTCTCAGGCCGTATTCTCGAGTCCCTTGCCAAGCTTCAGTATCTATCTGTAATTAGTTTGGCATACAACAATATCTCTGCGCCAGTTCCAGGATTATTTGCCAACTTTTCAAACTTGACCGTCTTGGGTCTCAGAAATTGCAGGTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAATTAATGACCAACTTGATGGTTCCTTGCCAGAATTCCCAAGGAATGGATCTCTTCAGTACCTCAATCTGTGGTCAACAAATTTTTCAGGGTTATTGCCAAATTCTATTGGCAACCTCAAAATGTTGTCCATCATAGATATTCGTGTTTGTAAGTTCACTGGACCGATCCCCAAGTCAATGACAAACCTTACACAATTGATTTATTTGTTGATGTCTTATAACAATTTGGAAGGTTCAATTCCCTCATTCAGTTGGGCCAAGAATGTTGTCAGCATAGACCTTTCCCACAATGGTCTAACAGGTACTATTAGTTCCACCCACTGGAGAAACCTTACTAAGCTATCTTATCTCAGTTTGGGATCCAATAAGCTCAATGGGAATATCCAAGCATCTCTGTTTTCTATTCCCCTATTGTCTAGTCTAGATCTTTCCAGCAACCAATTCTCTGGTCCATTCCCTGAAATTTCAAATGTGTCTTCCCACTTGCTGAATGGTCCTGATCTTGAACTTGTTTTGAGTAGCAACAATCTCCAAGGGCCACTACCTATGTCTATCTTTTGTTTGCTACGTCTTACCACTCTAGATCTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATCGTCTACACCAACTGAGAAATCTTTCTAAACTTGATCTTTCACACAATAACTTGTTTCTTACCCATGATTATACCAATTTCTCATATTCCTCATCTTCTCAACTCGGTGACTTGAGGTTGGTGTCATTGAAATTGAGAACATTTCCTAATTTCTTGAGAAATCAATCTTACTTGTACCGTTTGGAGCTTTCAGATAACCAGATAAATGGCAAGATACCCAACTGGATTTGGAGTCTTAGTGATCTTAGTTACCTAAATCTTTCTTGCTACTCCCTAGACTCTCTAGAAGTTCCTTCAAACAATCTCGGTAACTTAAGGTACCTTGACCTCCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTCCAACACCTTTCAGTGCCTATTATCTAGATTTCTCAAGGAATTATTTCAGCTCTATCATATCGAGTACCATTGGAGATATGTTACTTGAAGCTGGATTTTTGTCGCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATTCAGAATCTCTTGAGGTTCTTGATCTGTCCAATAATTCTCTGAGTGGCACGATTCCCCAGTGTTTAGCTACAATGAAGACGCTTGCAATACTCAATGTAAGGAGAAACAAGCTTACATATGTTAATGAATTCTCTCAGAATTGCAGTTTAAAAACTCTGGACATCAGTGGAAATCAGATTCAAGGCCAGTTTCTAAAATCTCTTGTCAACTGCACCCAGTTAGAGGTTTTAAACCTTGGAAACAATCTGATAACAGAACCATTTCCATGCTTTTTGAGGAACACATCCACCTTGCGTGTTCTTGTCTTGCGATCCAATAAATTTTATGGGGACATTGGATGCCGCGACACTAAGGGCACTTGGCCAGTACTTCAAATCATAGACCTAGCTCACAACAATTTTTATGGCGAAATACCTGAAACAACTCTAACAACTTGGCAGGCGATGAGGAATAGCAAAGATAATGCCCCATGGAATATCAATAGCCATCAGTTGGTGGAAGGAGTTTATTATCGAGAAGATACAGTCCCGGTTACAACCAAAGGTTCAGAGATACAGCTGATGAATGTTTTAACTATCTTCACCTCGATCGACTTCTCGTGCAACAAGTTCAACGGATCAATACCAGAGGAAATTGGAGAACTCAAATTATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTAAGTAACTTGAGTGAGCTAGAGTCTTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACCAGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGCGGTAATCAATTTTCAACATTTGAAGCAGCTTCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAATAACACAGGGTTCTCACCACCAAAGCAGGAAGGTAACCATTCAAATCCTGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGGTTTACATGTGGGTTTGGGATTGCCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATGACATGCTTCTAAAGATATTCCCTCAGCTGGAACAAAGATTTGGTCATCACAGGAGACATGTTTATGTACATCAGAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1014

Amino Acids

113.58

Weight (kDa)

7.08

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 39 - 136 1e-07 Leucine-rich repeat region
LRR_8 PF13855 183 - 240 3.2e-06 Leucine rich repeat
LRR_14 PF23598 254 - 310 1.6e-07 Leucine-rich repeat region
LRR_8 PF13855 325 - 385 6.6e-06 Leucine rich repeat
LRR_8 PF13855 601 - 656 4.6e-07 Leucine rich repeat
LRR_4 PF12799 667 - 703 4.7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 836 - 894 8.4e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 930
Acc36I ACCTGC 1 cut(s) 636
Acc65I GGTACC 1 cut(s) 1653
AccB1I GGYRCC 1 cut(s) 1653
AccB7I CCANNNNNTGG 3 cut(s) 755, 1032, 2347
AccBSI CCGCTC 1 cut(s) 2613
AccI GTMKAC 1 cut(s) 1339
AccII CGCG 1 cut(s) 2199
AciI CCGC 5 cut(s) 176, 216, 2197, 2613, 2700
AclWI GGATC 8 cut(s) 440, 766, 871, 1065, 1078, 1838, 2160, 2479
AcoI YGGCCR 1 cut(s) 2216
AcuI CTGAAG 2 cut(s) 524, 749
AfaI GTAC 7 cut(s) 770, 1015, 1511, 1655, 1768, 2223, 3021
AfiI CCNNNNNNNGG 9 cut(s) 172, 477, 593, 755, 1032, 2077, 2347, 2867, 2980
AflII CTTAAG 1 cut(s) 1648
AflIII ACRYGT 2 cut(s) 2876, 3010
AjnI CCWGG 2 cut(s) 592, 2827
AjuI GAANNNNNNNTTGG 4 cut(s) 2519, 2551, 2976, 3008
Alw26I GTCTC 4 cut(s) 143, 638, 3001, 3031
AlwI GGATC 8 cut(s) 440, 766, 871, 1065, 1078, 1838, 2160, 2479
Ama87I CYCGRG 1 cut(s) 521
AoxI GGCC 9 cut(s) 59, 340, 445, 511, 966, 1247, 2038, 2216, 2759
ApeKI GCWGC 2 cut(s) 99, 2726
ArsI GACNNNNNNTTYG 2 cut(s) 2980, 3012
AseI ATTAAT 1 cut(s) 714
Asp700I GAANNNNTTC 3 cut(s) 1357, 1745, 2115
Asp718I GGTACC 1 cut(s) 1653
AspLEI GCGC 1 cut(s) 586
AsuC2I CCSGG 1 cut(s) 2384
AsuHPI GGTGA 3 cut(s) 1454, 2428, 2787
AvaI CYCGRG 1 cut(s) 521
AvaII GGWCC 5 cut(s) 481, 872, 1160, 1205, 2590
AxyI CCTNAGG 1 cut(s) 476
BaeGI GKGCMC 1 cut(s) 2213
BalI TGGCCA 1 cut(s) 2218
BamHI GGATCC 1 cut(s) 1070
BanI GGYRCC 1 cut(s) 1653
BauI CACGAG 1 cut(s) 2452
BbsI GAAGAC 2 cut(s) 1179, 1937
BbvCI CCTCAGC 1 cut(s) 2976
BbvI GCAGC 2 cut(s) 111, 2738
BceAI ACGGC 2 cut(s) 51, 498
BcgI CGANNNNNNTGC 2 cut(s) 512, 546
BciT130I CCWGG 2 cut(s) 594, 2829
BciVI GTATCC 1 cut(s) 2685
BcnI CCSGG 1 cut(s) 2384
BcoDI GTCTC 4 cut(s) 143, 638, 3001, 3031
BfaI CTAG 8 cut(s) 1128, 1133, 1292, 1610, 1619, 1727, 2240, 2579
BfrI CTTAAG 1 cut(s) 1648
BfuAI ACCTGC 1 cut(s) 636
BfuI GTATCC 1 cut(s) 2685
BglII AGATCT 4 cut(s) 226, 672, 1135, 1294
BisI GCNGC 3 cut(s) 100, 2197, 2727
BlsI GCNGC 3 cut(s) 101, 2198, 2728
BmcAI AGTACT 1 cut(s) 2223
Bme1390I CCNGG 3 cut(s) 594, 2384, 2829
Bme18I GGWCC 5 cut(s) 481, 872, 1160, 1205, 2590
BmeT110I CYCGRG 1 cut(s) 521
BmiI GGNNCC 6 cut(s) 446, 482, 733, 1072, 1655, 2760
BmrFI CCNGG 3 cut(s) 594, 2384, 2829
BmrI ACTGGG 2 cut(s) 1906, 2065
BmsI GCATC 2 cut(s) 1109, 2183
BmuI ACTGGG 2 cut(s) 1906, 2065
BpiI GAAGAC 2 cut(s) 1179, 1937
BpmI CTGGAG 1 cut(s) 1054
Bpu10I CCTNAGC 2 cut(s) 485, 2976
BpuEI CTTGAG 7 cut(s) 259, 322, 1468, 1510, 1720, 1886, 2590
BpuMI CCSGG 1 cut(s) 2384
BsaBI GATNNNNATC 1 cut(s) 2894
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
BsaXI ACNNNNNCTCC 2 cut(s) 1558, 1588
Bsc4I CCNNNNNNNGG 9 cut(s) 172, 477, 593, 755, 1032, 2077, 2347, 2867, 2980
Bse21I CCTNAGG 1 cut(s) 476
Bse8I GATNNNNATC 1 cut(s) 2894
BseBI CCWGG 2 cut(s) 594, 2829
BseDI CCNNGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
BseGI GGATG 4 cut(s) 212, 285, 2138, 2198
BseJI GATNNNNATC 1 cut(s) 2894
BseLI CCNNNNNNNGG 9 cut(s) 172, 477, 593, 755, 1032, 2077, 2347, 2867, 2980
BseRI GAGGAG 1 cut(s) 319
BseSI GKGCMC 1 cut(s) 2213
BseXI GCAGC 2 cut(s) 111, 2738
BseYI CCCAGC 1 cut(s) 62
BsgI GTGCAG 2 cut(s) 2050, 2565
Bsh1236I CGCG 1 cut(s) 2199
Bsh1285I CGRYCG 1 cut(s) 2445
BshFI GGCC 9 cut(s) 61, 342, 447, 513, 968, 1249, 2040, 2218, 2761
BshNI GGYRCC 1 cut(s) 1653
BsiEI CGRYCG 1 cut(s) 2445
BsiHKCI CYCGRG 1 cut(s) 521
BsiSI CCGG 1 cut(s) 2384
BslFI GGGAC 3 cut(s) 511, 2198, 2366
BslI CCNNNNNNNGG 9 cut(s) 172, 477, 593, 755, 1032, 2077, 2347, 2867, 2980
BsmAI GTCTC 4 cut(s) 143, 638, 3001, 3031
BsmBI CGTCTC 1 cut(s) 3031
BsmFI GGGAC 3 cut(s) 511, 2198, 2366
BsmI GAATGC 1 cut(s) 2654
BsnI GGCC 9 cut(s) 61, 342, 447, 513, 968, 1249, 2040, 2218, 2761
Bso31I GGTCTC 1 cut(s) 638
BsoBI CYCGRG 1 cut(s) 521
Bsp1286I GDGCHC 1 cut(s) 2213
Bsp1407I TGTACA 1 cut(s) 3019
Bsp19I CCATGG 1 cut(s) 2324
BspACI CCGC 5 cut(s) 176, 216, 2197, 2613, 2700
BspANI GGCC 9 cut(s) 61, 342, 447, 513, 968, 1249, 2040, 2218, 2761
BspFNI CGCG 1 cut(s) 2199
BspLI GGNNCC 6 cut(s) 446, 482, 733, 1072, 1655, 2760
BspMI ACCTGC 1 cut(s) 636
BspPI GGATC 8 cut(s) 440, 766, 871, 1065, 1078, 1838, 2160, 2479
BspT107I GGYRCC 1 cut(s) 1653
BspTI CTTAAG 1 cut(s) 1648
BspTNI GGTCTC 1 cut(s) 638
BsrBI CCGCTC 1 cut(s) 2613
BsrGI TGTACA 1 cut(s) 3019
BssECI CCNNGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
BssSI CACGAG 1 cut(s) 2452
BssT1I CCWWGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
Bst2BI CACGAG 1 cut(s) 2452
Bst2UI CCWGG 2 cut(s) 594, 2829
Bst4CI ACNGT 3 cut(s) 625, 1514, 2380
Bst6I CTCTTC 2 cut(s) 146, 768
BstAFI CTTAAG 1 cut(s) 1648
BstAUI TGTACA 1 cut(s) 3019
BstC8I GCNNGC 3 cut(s) 133, 1938, 2295
BstDSI CCRYGG 1 cut(s) 2324
BstEII GGTNACC 1 cut(s) 2813
BstF5I GGATG 4 cut(s) 212, 285, 2138, 2198
BstFNI CGCG 1 cut(s) 2199
BstHHI GCGC 1 cut(s) 586
BstMAI GTCTC 4 cut(s) 143, 638, 3001, 3031
BstMCI CGRYCG 1 cut(s) 2445
BstNI CCWGG 2 cut(s) 594, 2829
BstNSI RCATGY 4 cut(s) 493, 2880, 2959, 3014
BstPI GGTNACC 1 cut(s) 2813
BstSCI CCNGG 3 cut(s) 592, 2382, 2827
BstSLI GKGCMC 1 cut(s) 2213
BstUI CGCG 1 cut(s) 2199
BstV1I GCAGC 2 cut(s) 111, 2738
BstV2I GAAGAC 2 cut(s) 1179, 1937
BstX2I RGATCY 6 cut(s) 226, 672, 758, 1070, 1135, 1294
BstXI CCANNNNNNTGG 4 cut(s) 728, 1157, 1541, 1682
BstYI RGATCY 6 cut(s) 226, 672, 758, 1070, 1135, 1294
Bsu36I CCTNAGG 1 cut(s) 476
BsuI GTATCC 1 cut(s) 2685
BsuRI GGCC 9 cut(s) 61, 342, 447, 513, 968, 1249, 2040, 2218, 2761
BtgI CCRYGG 1 cut(s) 2324
BtgZI GCGATG 1 cut(s) 2312
BtsCI GGATG 4 cut(s) 212, 285, 2138, 2198
BtsI GCAGTG 1 cut(s) 7
BtsIMutI CAGTG 7 cut(s) 7, 442, 867, 1030, 1720, 1919, 2026
BveI ACCTGC 1 cut(s) 636
Cac8I GCNNGC 3 cut(s) 133, 1938, 2295
CfoI GCGC 1 cut(s) 586
CseI GACGC 1 cut(s) 1942
Csp6I GTAC 7 cut(s) 769, 1014, 1510, 1654, 1767, 2222, 3020
CviQI GTAC 7 cut(s) 769, 1014, 1510, 1654, 1767, 2222, 3020
DraI TTTAAA 2 cut(s) 2004, 2085
EaeI YGGCCR 1 cut(s) 2216
Eam1104I CTCTTC 2 cut(s) 146, 768
EarI CTCTTC 2 cut(s) 146, 768
EciI GGCGGA 2 cut(s) 191, 205
Eco130I CCWWGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
Eco31I GGTCTC 1 cut(s) 638
Eco47I GGWCC 5 cut(s) 481, 872, 1160, 1205, 2590
Eco57I CTGAAG 2 cut(s) 524, 749
Eco81I CCTNAGG 1 cut(s) 476
Eco88I CYCGRG 1 cut(s) 521
Eco91I GGTNACC 1 cut(s) 2813
EcoO109I RGGNCCY 2 cut(s) 481, 2759
EcoO65I GGTNACC 1 cut(s) 2813
EcoRI GAATTC 3 cut(s) 40, 743, 1982
EcoRII CCWGG 2 cut(s) 592, 2827
EcoT14I CCWWGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
ErhI CCWWGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
Esp3I CGTCTC 1 cut(s) 3031
FaqI GGGAC 3 cut(s) 511, 2198, 2366
FauNDI CATATG 1 cut(s) 1972
FblI GTMKAC 1 cut(s) 1339
Fnu4HI GCNGC 3 cut(s) 100, 2197, 2727
FokI GGATG 4 cut(s) 199, 272, 2125, 2205
Fsp4HI GCNGC 3 cut(s) 100, 2197, 2727
FspBI CTAG 8 cut(s) 1128, 1133, 1292, 1610, 1619, 1727, 2240, 2579
GlaI GCGC 1 cut(s) 585
GluI GCNGC 3 cut(s) 100, 2197, 2727
GsaI CCCAGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 1054
HaeIII GGCC 9 cut(s) 61, 342, 447, 513, 968, 1249, 2040, 2218, 2761
HapII CCGG 1 cut(s) 2384
HgaI GACGC 1 cut(s) 1942
HhaI GCGC 1 cut(s) 586
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HincII GTYRAC 3 cut(s) 28, 786, 2062
HindII GTYRAC 3 cut(s) 28, 786, 2062
HindIII AAGCTT 2 cut(s) 536, 1964
HpaI GTTAAC 1 cut(s) 28
HpaII CCGG 1 cut(s) 2384
HphI GGTGA 3 cut(s) 1454, 2428, 2787
Hpy166II GTNNAC 7 cut(s) 28, 373, 786, 867, 1340, 2062, 2874
Hpy8I GTNNAC 7 cut(s) 28, 373, 786, 867, 1340, 2062, 2874
HpyAV CCTTC 6 cut(s) 696, 935, 1638, 2348, 2743, 2804
HpyCH4III ACNGT 3 cut(s) 625, 1514, 2380
HpyCH4IV ACGT 2 cut(s) 1279, 3040
HpySE526I ACGT 2 cut(s) 1279, 3040
HspAI GCGC 1 cut(s) 584
KpnI GGTACC 1 cut(s) 1657
KspAI GTTAAC 1 cut(s) 28
LmnI GCTCC 1 cut(s) 1519
Lsp1109I GCAGC 2 cut(s) 111, 2738
LweI GCATC 2 cut(s) 1109, 2183
MaeI CTAG 8 cut(s) 1128, 1133, 1292, 1610, 1619, 1727, 2240, 2579
MaeII ACGT 2 cut(s) 1279, 3040
MbiI CCGCTC 1 cut(s) 2613
MfeI CAATTG 3 cut(s) 496, 905, 2678
MflI RGATCY 6 cut(s) 226, 672, 758, 1070, 1135, 1294
MhlI GDGCHC 1 cut(s) 2213
MlsI TGGCCA 1 cut(s) 2218
MluNI TGGCCA 1 cut(s) 2218
MlyI GAGTC 5 cut(s) 13, 533, 1576, 1607, 2591
MmeI TCCRAC 3 cut(s) 1695, 1727, 2550
Mox20I TGGCCA 1 cut(s) 2218
MroXI GAANNNNTTC 3 cut(s) 1357, 1745, 2115
MscI TGGCCA 1 cut(s) 2218
MslI CAYNNNNRTG 2 cut(s) 2119, 3015
Msp20I TGGCCA 1 cut(s) 2218
MspA1I CMGCKG 3 cut(s) 116, 2413, 2980
MspCI CTTAAG 1 cut(s) 1648
MspI CCGG 1 cut(s) 2384
MspR9I CCNGG 3 cut(s) 594, 2384, 2829
MunI CAATTG 3 cut(s) 496, 905, 2678
Mva1269I GAATGC 1 cut(s) 2654
MvaI CCWGG 2 cut(s) 594, 2829
MvnI CGCG 1 cut(s) 2199
NciI CCSGG 1 cut(s) 2384
NcoI CCATGG 1 cut(s) 2324
NdeI CATATG 1 cut(s) 1972
NlaIV GGNNCC 6 cut(s) 446, 482, 733, 1072, 1655, 2760
NmeAIII GCCGAG 1 cut(s) 473
NmuCI GTSAC 3 cut(s) 5, 1442, 2901
NspI RCATGY 4 cut(s) 493, 2880, 2959, 3014
PaeR7I CTCGAG 1 cut(s) 521
PciI ACATGT 2 cut(s) 2876, 3010
PcsI WCGNNNNNNNCGW 1 cut(s) 64
PctI GAATGC 1 cut(s) 2654
PdmI GAANNNNTTC 3 cut(s) 1357, 1745, 2115
PfeI GAWTC 5 cut(s) 1841, 1859, 1906, 2032, 2662
PflMI CCANNNNNTGG 3 cut(s) 755, 1032, 2347
PfoI TCCNGGA 2 cut(s) 592, 2827
PkrI GCNGC 3 cut(s) 101, 2198, 2728
Ple19I CGATCG 1 cut(s) 2445
PleI GAGTC 5 cut(s) 12, 532, 1575, 1607, 2590
PpsI GAGTC 5 cut(s) 12, 532, 1575, 1607, 2590
PpuMI RGGWCCY 1 cut(s) 481
PscI ACATGT 2 cut(s) 2876, 3010
PshBI ATTAAT 1 cut(s) 714
PsiI TTATAA 1 cut(s) 930
Psp5II RGGWCCY 1 cut(s) 481
Psp6I CCWGG 2 cut(s) 592, 2827
PspEI GGTNACC 1 cut(s) 2813
PspFI CCCAGC 1 cut(s) 62
PspGI CCWGG 2 cut(s) 592, 2827
PspN4I GGNNCC 6 cut(s) 446, 482, 733, 1072, 1655, 2760
PspPPI RGGWCCY 1 cut(s) 481
PsrI GAACNNNNNNTAC 2 cut(s) 1006, 1038
PsuI RGATCY 6 cut(s) 226, 672, 758, 1070, 1135, 1294
PvuI CGATCG 1 cut(s) 2445
PvuII CAGCTG 3 cut(s) 116, 2413, 2980
RsaI GTAC 7 cut(s) 770, 1015, 1511, 1655, 1768, 2223, 3021
RsaNI GTAC 7 cut(s) 769, 1014, 1510, 1654, 1767, 2222, 3020
RseI CAYNNNNRTG 2 cut(s) 2119, 3015
SatI GCNGC 3 cut(s) 100, 2197, 2727
ScaI AGTACT 1 cut(s) 2223
SchI GAGTC 5 cut(s) 13, 533, 1576, 1607, 2591
ScrFI CCNGG 3 cut(s) 594, 2384, 2829
SduI GDGCHC 1 cut(s) 2213
SfaNI GCATC 2 cut(s) 1109, 2183
Sfr274I CTCGAG 1 cut(s) 521
SinI GGWCC 5 cut(s) 481, 872, 1160, 1205, 2590
SlaI CTCGAG 1 cut(s) 521
SmiMI CAYNNNNRTG 2 cut(s) 2119, 3015
SmlI CTYRAG 9 cut(s) 238, 301, 521, 1447, 1489, 1648, 1735, 1865, 2569
SmoI CTYRAG 9 cut(s) 238, 301, 521, 1447, 1489, 1648, 1735, 1865, 2569
SsiI CCGC 5 cut(s) 176, 216, 2197, 2613, 2700
SspMI CTAG 8 cut(s) 1128, 1133, 1292, 1610, 1619, 1727, 2240, 2579
StyD4I CCNGG 3 cut(s) 592, 2382, 2827
StyI CCWWGG 7 cut(s) 103, 343, 749, 1243, 2089, 2324, 2737
TaaI ACNGT 3 cut(s) 625, 1514, 2380
TaiI ACGT 2 cut(s) 1282, 3043
TaqI TCGA 7 cut(s) 522, 1763, 1811, 2368, 2441, 2445, 2597
TaqII GACCGA 1 cut(s) 889
TatI WGTACW 2 cut(s) 2221, 3019
TauI GCSGC 1 cut(s) 2199
TfiI GAWTC 5 cut(s) 1841, 1859, 1906, 2032, 2662
TscAI CASTG 7 cut(s) 14, 442, 874, 1037, 1720, 1919, 2026
TseFI GTSAC 3 cut(s) 5, 1442, 2901
TseI GCWGC 2 cut(s) 99, 2726
Tsp45I GTSAC 3 cut(s) 5, 1442, 2901
TspDTI ATGAA 6 cut(s) 53, 140, 1670, 1943, 1995, 2432
TspGWI ACGGA 1 cut(s) 2484
TspRI CASTG 7 cut(s) 14, 442, 874, 1037, 1720, 1919, 2026
Van91I CCANNNNNTGG 3 cut(s) 755, 1032, 2347
Vha464I CTTAAG 1 cut(s) 1648
VpaK11BI GGWCC 5 cut(s) 481, 872, 1160, 1205, 2590
VspI ATTAAT 1 cut(s) 714
XbaI TCTAGA 4 cut(s) 1132, 1291, 1618, 1726
XceI RCATGY 4 cut(s) 493, 2880, 2959, 3014
XcmI CCANNNNNNNNNTGG 2 cut(s) 1199, 2825
XhoI CTCGAG 1 cut(s) 521
XmiI GTMKAC 1 cut(s) 1339
XmnI GAANNNNTTC 3 cut(s) 1357, 1745, 2115
XspI CTAG 8 cut(s) 1128, 1133, 1292, 1610, 1619, 1727, 2240, 2579
ZrmI AGTACT 1 cut(s) 2223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.