FvH4_6g11660

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Forward (+)
6980961 .. 6984591
3631 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g11660.t1

Sequence Viewer

Length: 3111 bp
ATGAGAAGACTTCTAATTCACAGCCAGCAGTGTCTCAAAGACCAGCAACTAAACTTGCTCGACTTCAAGAACAGCCTTCTATTCAATGCTTCTCTTTCCTCCAAGCTTGTATCATGGGATTCGAGAACCGACTGCTGTTCTTGGCCTGGTGTAAGTTGCAGTACTAATGGCAGTGTTGTTGGTCTTGACATCAGCCGTGAGTCTATCTCAGGTGGAATCTACAACTCTAGCAGTTTGTTTGATCTTCAACATCTTCAAAGCCTCAGTTTGGCCTTTAACAACTTTACTGGCTCTCAAATTCCATCTGCAACCGGAAAGCTCACAAGTTTGAGGTACCTAAACTTATCCTCTGCTGGTTTTGGAGGGCAAATTCCCATTGAGATTTCTTTGTTGGGAAAGTTGGTAATCCTTGATATTTCCTATAATCAAGGACTTGAGATCCAGGATTTGAGCATGCTGATTCAGAACCTCACAGAACTTACAGAGTTATATCTTGACAATGTGAGTATATTGTCACAGACAAGTGACTGGTCCCTAGCCATATCATCATCACTGCCAAACCTGAAGGTGTTGAGCTTATCCAACTGTCACCTTTCTGGCCCTATTGACAAGTCCCTGGCTAAGCTCTCATCTCTATCCGTGATTCGGTTGGATTTAAACAAGATATCTTCTCCCATTCCTGGATTCTTTGCCAACTTTGCAAACTTGACTACCTTGAGTCTCAGAAGCTGTGGTTTGCAGGGAACATTTCCAAAAGAGATCATTCAGGTACCTTCTTTACAAACTATTGACCTTTCCTATAACTATGGTCTTGGTGGTTCTTTGCCTGAATTTTCGAAGAACGCATCTCTTCAGTCCTTGAATCTTTATGTGACAAACTTTTCAGGGGTCTTACCTGACTCCATTGGAAACCTCAATATGTTGTCAACAATAAATCTTTCAGGATGCAAATTTTCAGGATCAATTCCAAGGGCGATGGGAAACCTTACAAAATTGGTTCATTTTGATTTGTCAGGGAATCAGTTTAATGGCTCAATTCCGTGCTTCAGTAGCGCAAAAAATCTAGCCGAAATAAATCTGTATGCCAATGATCTAACTGGTCATATTGGTTGCACTCAGTGGCAAAACCTTACTAGCCTAGTGAGTATCAACTTAGGTAGTAATGTGTTCCAAGGGAGTCTTCCATCCTCTTTGTTTTGTCTTCCCTTGCTGAAGAGCTTAAATCTTGGCCACAATCAATTCTCTGGTCAATTCCCTGAAATTTGCAATGCCTCTTCTTACTTGATGGAAAGTGTTGACTTAAGTGACAACAATCTTGAAGGGCCAATTCCCATGTCTATCTTTAATCTCCTAGGACTTAAGGAACTTCTTCTTAATTCAAACAGTCTCAATGGCTCATTTCCTCTTGATGGTCTTCACCAGCTCATAAATCTTGAGATTCTTTATCTTCAAGAGAATAGCTTGGTGCTTAGTTATGATGCTACCAATTCCTCTTATTCCTCATTTCCTCAGCTTTATCAATTGAAGTTAGCTTCAGGAAAGCTGACAACATTCCCTGATTTCTTGAGAAATCAATCCGGATTGGCATTTCTGGACCTCTCAAATAACCTGTTACATGGCATGATACCTAACTGGATATGGAAACTTAATCTTTACCAGCTGAACCTCTCCTGTAATTCCCTACAAACTATAGAAGGTCCTTTACTCAATGTCACATCTCCAGTATTTTTGCTGGACCTTAGTTACAACAAGCTTCAAGGGCAGATCCCAGATTTCTCTTCTTATTATCTGGATTACTCCAGCAATAATTTCAGCTCTGGCATACCAACTGGTGCAGATTTCTGTAGGTATACTTCCTTTTTCTCTGCTGCAAACAATAACCTCAGTGGGATCATTCCTGGATCAATTTGCAATTCAGCATCTCTTGAGGTCCTCGATCTATCCAATAATTCCTTCACTGGCACGCTACCTCAGTGCTTCACCACAATGAGTGGCCTTGCAGTACTTGATTTAAGTGGAAACAATGTTACTAACGTTGTAATACCTCAGAATTGCAACTTGGGAAGTCTAGACCTGAGTGGAAATCAGTTGGAAAGCCAGCTTCCAAAATCTCTTGCCAACTGTACAAAGTTGGAGGTGTTAAACCTCGGAAACAATCAGATAACAGATGCCTTTCCTTGCTTTTTGAAGAACATATCCACCTTGCGTCTGCTTAGTTTACGGTCCAATAACTTTTACGGATCCTCTGTTTGTCCCAAGACTAATGGAGGTTGGCCAATGCTTCAGATCATAGACCTAGCTGACAATAATTTTGAAGGTGAAATATCTGGAAGCTTTTTATCAACTTGGCAAACAATGATAGCCAACGAAGATAATGCTGCTCGATATCGCTATCACCTTGGGATGCAGGGAGGTATGCGTTATGTGATTAATTATAAAGATGCAGTTACAGTTACTAGCAAAGGTTTACAGATGAACCTGCCAAGCATTCTCACTGTTTTCACCTTAATTGACTTCTCATGCAACAAGTTCAATGGATCAATTCCTGAGGAAATCGGAGGACTCAAATCACTACGAGTCCTCAACTTGTCCAAAAATGCTTTCACAGGTGCAATCCCATCATCACTAAGTAGCTTGCAAGTAGTTGAGTCCTTAGACCTCTCGCAGAACAAGCTGAGTGGCGAAATTCCACCACAGTTTGCAAAACTTACTTTCCTTACTGTCTTGAATCTATCAAATAATCAACTGGTGGGCAGAATTCCAACAAGTACTCAATTTTCCACATTTCCAAAATCTTCATTTCAAGGAAATATAGATTTATGGGGGCCTCCTTTGACAGAAGACAACATAGCGGGAACATCACCGCCAATAGTAGGAGGAAGTCGTCAAACTTCTGGACATGAGGTTGATTGGGATGTTATCAGTGTTGAAATTGGATTCGCAGCTGGCTTTGGAGTTGCCATTGCATCACTATTCTTATGCAAGAGATGGAGGCAGTGGTACTACATAACTATGTATAAAATACTTCTTAAGATCTTCCCTCAGCTAGAACAAAGATTTGGCAATCACAGACGACATGTTTCCATCCATCAAAGGTACGGGAGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1037

Amino Acids

113.25

Weight (kDa)

5.95

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 13 - 54 1.7e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 78 - 167 3.6e-07 Leucine-rich repeat region
LRR_8 PF13855 186 - 246 7.3e-06 Leucine rich repeat
LRR_14 PF23598 279 - 509 1e-06 Leucine-rich repeat region
LRR_8 PF13855 625 - 675 1.2e-07 Leucine rich repeat
LRR_4 PF12799 686 - 723 4.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 832 - 914 4.1e-06 Leucine-rich repeat region
LRR_8 PF13855 857 - 916 4.5e-08 Leucine rich repeat
LRR_4 PF12799 883 - 916 9.8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2436
Acc36I ACCTGC 1 cut(s) 2487
Acc65I GGTACC 2 cut(s) 333, 769
AccB1I GGYRCC 2 cut(s) 333, 769
AccI GTMKAC 1 cut(s) 1850
AccIII TCCGGA 1 cut(s) 1577
AciI CCGC 2 cut(s) 2852, 2864
AclI AACGTT 1 cut(s) 2034
AclWI GGATC 8 cut(s) 433, 967, 1759, 1898, 1909, 2235, 2248, 2545
AcoI YGGCCR 2 cut(s) 1228, 2273
AcsI RAATTY 7 cut(s) 297, 369, 830, 950, 1260, 2685, 2757
AcuI CTGAAG 6 cut(s) 584, 836, 1030, 1232, 1518, 2267
AdeI CACNNNGTG 1 cut(s) 1119
AfaI GTAC 8 cut(s) 163, 335, 771, 2004, 2125, 2770, 3002, 3098
AfiI CCNNNNNNNGG 5 cut(s) 268, 645, 680, 1409, 2873
AflII CTTAAG 3 cut(s) 1300, 1358, 3029
AflIII ACRYGT 1 cut(s) 3076
AjnI CCWGG 5 cut(s) 145, 441, 615, 679, 1897
Alw26I GTCTC 3 cut(s) 38, 725, 1391
AlwI GGATC 8 cut(s) 433, 967, 1759, 1898, 1909, 2235, 2248, 2545
AlwNI CAGNNNCTG 1 cut(s) 729
Aor13HI TCCGGA 1 cut(s) 1577
AoxI GGCC 8 cut(s) 143, 270, 598, 1228, 1322, 1993, 2273, 2825
ApeKI GCWGC 3 cut(s) 1868, 2378, 2942
ApoI RAATTY 7 cut(s) 297, 369, 830, 950, 1260, 2685, 2757
ArsI GACNNNNNNTTYG 2 cut(s) 2294, 2326
AseI ATTAAT 1 cut(s) 2430
Asp700I GAANNNNTTC 1 cut(s) 1368
Asp718I GGTACC 2 cut(s) 333, 769
AspA2I CCTAGG 1 cut(s) 1351
AspLEI GCGC 1 cut(s) 1055
AspS9I GGNCC 9 cut(s) 531, 599, 1322, 1594, 1697, 1735, 1930, 2223, 2825
AsuHPI GGTGA 7 cut(s) 581, 1409, 1972, 2330, 2387, 2494, 2853
AsuII TTCGAA 1 cut(s) 836
AvaII GGWCC 6 cut(s) 531, 1594, 1697, 1735, 1930, 2223
AvrII CCTAGG 1 cut(s) 1351
AxyI CCTNAGG 1 cut(s) 2547
BalI TGGCCA 2 cut(s) 1230, 2275
BamHI GGATCC 1 cut(s) 2240
BanI GGYRCC 2 cut(s) 333, 769
BarI GAAGNNNNNNTAC 4 cut(s) 1686, 1718, 1837, 1869
BbsI GAAGAC 5 cut(s) 13, 1172, 1193, 1406, 2847
BbvCI CCTCAGC 2 cut(s) 1509, 3042
BbvI GCAGC 3 cut(s) 1855, 2365, 2954
BccI CCATC 9 cut(s) 310, 970, 1192, 1279, 1403, 2626, 2982, 3092, 3096
BceAI ACGGC 1 cut(s) 180
BcgI CGANNNNNNTGC 2 cut(s) 2357, 2391
BciT130I CCWGG 5 cut(s) 147, 443, 617, 681, 1899
BcoDI GTCTC 3 cut(s) 38, 725, 1391
BfmI CTRYAG 2 cut(s) 1689, 1843
BfrI CTTAAG 3 cut(s) 1300, 1358, 3029
BfuAI ACCTGC 1 cut(s) 2487
BglII AGATCT 1 cut(s) 3033
BisI GCNGC 3 cut(s) 1869, 2379, 2943
BlnI CCTAGG 1 cut(s) 1351
BlpI GCTNAGC 1 cut(s) 621
BlsI GCNGC 3 cut(s) 1870, 2380, 2944
BmcAI AGTACT 3 cut(s) 163, 2004, 2770
Bme1390I CCNGG 5 cut(s) 147, 443, 617, 681, 1899
Bme18I GGWCC 6 cut(s) 531, 1594, 1697, 1735, 1930, 2223
BmgT120I GGNCC 9 cut(s) 531, 599, 1322, 1594, 1697, 1735, 1930, 2223, 2825
BmiI GGNNCC 5 cut(s) 335, 533, 771, 2242, 2826
BmrFI CCNGG 5 cut(s) 147, 443, 617, 681, 1899
BmsI GCATC 8 cut(s) 854, 935, 1468, 1928, 2158, 2394, 2431, 2975
BpiI GAAGAC 5 cut(s) 13, 1172, 1193, 1406, 2847
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 2 cut(s) 1704, 1783
Bpu10I CCTNAGC 2 cut(s) 1509, 3042
Bpu1102I GCTNAGC 1 cut(s) 621
Bpu14I TTCGAA 1 cut(s) 836
BpuEI CTTGAG 5 cut(s) 455, 736, 1454, 1585, 1946
BsaJI CCNNGG 6 cut(s) 615, 968, 1171, 1351, 2146, 2398
BsaWI WCCGGW 2 cut(s) 311, 1577
Bsc4I CCNNNNNNNGG 5 cut(s) 268, 645, 680, 1409, 2873
Bse1I ACTGG 8 cut(s) 292, 533, 1102, 1637, 1721, 1834, 1963, 2751
Bse21I CCTNAGG 1 cut(s) 2547
Bse3DI GCAATG 2 cut(s) 1273, 2961
BseAI TCCGGA 1 cut(s) 1577
BseBI CCWGG 5 cut(s) 147, 443, 617, 681, 1899
BseDI CCNNGG 6 cut(s) 615, 968, 1171, 1351, 2146, 2398
BseGI GGATG 5 cut(s) 950, 1184, 2409, 2920, 3084
BseLI CCNNNNNNNGG 5 cut(s) 268, 645, 680, 1409, 2873
BseMI GCAATG 2 cut(s) 1273, 2961
BseNI ACTGG 8 cut(s) 292, 533, 1102, 1637, 1721, 1834, 1963, 2751
BseXI GCAGC 3 cut(s) 1855, 2365, 2954
BsgI GTGCAG 1 cut(s) 1854
BshFI GGCC 8 cut(s) 145, 272, 600, 1230, 1324, 1995, 2275, 2827
BshNI GGYRCC 2 cut(s) 333, 769
BsiSI CCGG 2 cut(s) 312, 1578
BslFI GGGAC 3 cut(s) 517, 598, 2238
BslI CCNNNNNNNGG 5 cut(s) 268, 645, 680, 1409, 2873
BsmAI GTCTC 3 cut(s) 38, 725, 1391
BsmFI GGGAC 3 cut(s) 517, 598, 2238
BsmI GAATGC 1 cut(s) 2487
BsnI GGCC 8 cut(s) 145, 272, 600, 1230, 1324, 1995, 2275, 2827
Bsp119I TTCGAA 1 cut(s) 836
Bsp13I TCCGGA 1 cut(s) 1577
Bsp1407I TGTACA 1 cut(s) 2123
Bsp1720I GCTNAGC 1 cut(s) 621
BspACI CCGC 2 cut(s) 2852, 2864
BspANI GGCC 8 cut(s) 145, 272, 600, 1230, 1324, 1995, 2275, 2827
BspEI TCCGGA 1 cut(s) 1577
BspLI GGNNCC 5 cut(s) 335, 533, 771, 2242, 2826
BspMI ACCTGC 1 cut(s) 2487
BspPI GGATC 8 cut(s) 433, 967, 1759, 1898, 1909, 2235, 2248, 2545
BspQI GCTCTTC 1 cut(s) 1208
BspT104I TTCGAA 1 cut(s) 836
BspT107I GGYRCC 2 cut(s) 333, 769
BspTI CTTAAG 3 cut(s) 1300, 1358, 3029
BsrDI GCAATG 2 cut(s) 1273, 2961
BsrGI TGTACA 1 cut(s) 2123
BsrI ACTGG 8 cut(s) 292, 533, 1102, 1637, 1721, 1834, 1963, 2751
BssECI CCNNGG 6 cut(s) 615, 968, 1171, 1351, 2146, 2398
BssNAI GTATAC 1 cut(s) 1851
BssT1I CCWWGG 4 cut(s) 968, 1171, 1351, 2398
Bst1107I GTATAC 1 cut(s) 1851
Bst2UI CCWGG 5 cut(s) 147, 443, 617, 681, 1899
Bst4CI ACNGT 8 cut(s) 587, 1385, 2123, 2223, 2452, 2497, 2697, 2722
Bst6I CTCTTC 4 cut(s) 855, 1208, 1279, 1783
BstAFI CTTAAG 3 cut(s) 1300, 1358, 3029
BstAUI TGTACA 1 cut(s) 2123
BstBI TTCGAA 1 cut(s) 836
BstC8I GCNNGC 6 cut(s) 26, 455, 1964, 2099, 2636, 2947
BstF5I GGATG 5 cut(s) 950, 1184, 2409, 2920, 3084
BstHHI GCGC 1 cut(s) 1055
BstMAI GTCTC 3 cut(s) 38, 725, 1391
BstMWI GCNNNNNNNGC 4 cut(s) 698, 1050, 1759, 2671
BstNI CCWGG 5 cut(s) 147, 443, 617, 681, 1899
BstNSI RCATGY 2 cut(s) 457, 3080
BstSCI CCNGG 5 cut(s) 145, 441, 615, 679, 1897
BstSFI CTRYAG 2 cut(s) 1689, 1843
BstV1I GCAGC 3 cut(s) 1855, 2365, 2954
BstV2I GAAGAC 5 cut(s) 13, 1172, 1193, 1406, 2847
BstX2I RGATCY 4 cut(s) 438, 1764, 2240, 3033
BstYI RGATCY 4 cut(s) 438, 1764, 2240, 3033
BstZ17I GTATAC 1 cut(s) 1851
Bsu36I CCTNAGG 1 cut(s) 2547
BsuRI GGCC 8 cut(s) 145, 272, 600, 1230, 1324, 1995, 2275, 2827
BtgZI GCGATG 1 cut(s) 989
BtsCI GGATG 5 cut(s) 950, 1184, 2409, 2920, 3084
BtsI GCAGTG 4 cut(s) 35, 178, 551, 3002
BveI ACCTGC 1 cut(s) 2487
Cac8I GCNNGC 6 cut(s) 26, 455, 1964, 2099, 2636, 2947
CaiI CAGNNNCTG 1 cut(s) 729
CfoI GCGC 1 cut(s) 1055
Cfr13I GGNCC 9 cut(s) 531, 599, 1322, 1594, 1697, 1735, 1930, 2223, 2825
CseI GACGC 1 cut(s) 2195
Csp6I GTAC 8 cut(s) 162, 334, 770, 2003, 2124, 2769, 3001, 3097
CspCI CAANNNNNGTGG 2 cut(s) 2659, 2694
CviAII CATG 8 cut(s) 114, 454, 1333, 1616, 1621, 2520, 2900, 3077
CviQI GTAC 8 cut(s) 162, 334, 770, 2003, 2124, 2769, 3001, 3097
DraI TTTAAA 1 cut(s) 657
DraIII CACNNNGTG 1 cut(s) 1119
EaeI YGGCCR 2 cut(s) 1228, 2273
Eam1104I CTCTTC 4 cut(s) 855, 1208, 1279, 1783
EarI CTCTTC 4 cut(s) 855, 1208, 1279, 1783
Eco130I CCWWGG 4 cut(s) 968, 1171, 1351, 2398
Eco32I GATATC 2 cut(s) 666, 2387
Eco47I GGWCC 6 cut(s) 531, 1594, 1697, 1735, 1930, 2223
Eco57I CTGAAG 6 cut(s) 584, 836, 1030, 1232, 1518, 2267
Eco81I CCTNAGG 1 cut(s) 2547
EcoO109I RGGNCCY 3 cut(s) 1697, 1930, 2825
EcoRI GAATTC 1 cut(s) 2757
EcoRII CCWGG 5 cut(s) 145, 441, 615, 679, 1897
EcoRV GATATC 2 cut(s) 666, 2387
EcoT14I CCWWGG 4 cut(s) 968, 1171, 1351, 2398
ErhI CCWWGG 4 cut(s) 968, 1171, 1351, 2398
FaeI CATG 8 cut(s) 117, 457, 1336, 1619, 1624, 2523, 2903, 3080
FalI AAGNNNNNCTT 2 cut(s) 1164, 1196
FaqI GGGAC 3 cut(s) 517, 598, 2238
FatI CATG 8 cut(s) 113, 453, 1332, 1615, 1620, 2519, 2899, 3076
FauI CCCGC 1 cut(s) 2845
FblI GTMKAC 1 cut(s) 1850
Fnu4HI GCNGC 3 cut(s) 1869, 2379, 2943
FokI GGATG 5 cut(s) 957, 1171, 2416, 2927, 3071
Fsp4HI GCNGC 3 cut(s) 1869, 2379, 2943
GlaI GCGC 1 cut(s) 1054
GluI GCNGC 3 cut(s) 1869, 2379, 2943
GsuI CTGGAG 2 cut(s) 1704, 1783
HaeIII GGCC 8 cut(s) 145, 272, 600, 1230, 1324, 1995, 2275, 2827
HapII CCGG 2 cut(s) 312, 1578
HgaI GACGC 1 cut(s) 2195
HhaI GCGC 1 cut(s) 1055
Hin1II CATG 8 cut(s) 117, 457, 1336, 1619, 1624, 2523, 2903, 3080
Hin6I GCGC 1 cut(s) 1053
HinP1I GCGC 1 cut(s) 1053
HincII GTYRAC 2 cut(s) 927, 1297
HindII GTYRAC 2 cut(s) 927, 1297
HindIII AAGCTT 3 cut(s) 104, 1751, 2332
HpaII CCGG 2 cut(s) 312, 1578
HphI GGTGA 7 cut(s) 581, 1409, 1972, 2330, 2387, 2494, 2853
Hpy166II GTNNAC 5 cut(s) 927, 1297, 1851, 2219, 2468
Hpy188I TCNGA 7 cut(s) 465, 725, 2049, 2150, 2160, 2286, 2558
Hpy8I GTNNAC 5 cut(s) 927, 1297, 1851, 2219, 2468
HpyAV CCTTC 7 cut(s) 86, 559, 783, 1313, 1688, 1963, 2309
HpyCH4III ACNGT 8 cut(s) 587, 1385, 2123, 2223, 2452, 2497, 2697, 2722
HpyCH4IV ACGT 1 cut(s) 2034
HpyF10VI GCNNNNNNNGC 4 cut(s) 698, 1050, 1759, 2671
HpySE526I ACGT 1 cut(s) 2034
Hsp92II CATG 8 cut(s) 117, 457, 1336, 1619, 1624, 2523, 2903, 3080
HspAI GCGC 1 cut(s) 1053
Kpn2I TCCGGA 1 cut(s) 1577
KpnI GGTACC 2 cut(s) 337, 773
LguI GCTCTTC 1 cut(s) 1208
Lsp1109I GCAGC 3 cut(s) 1855, 2365, 2954
LweI GCATC 8 cut(s) 854, 935, 1468, 1928, 2158, 2394, 2431, 2975
MaeII ACGT 1 cut(s) 2034
MfeI CAATTG 1 cut(s) 1520
MflI RGATCY 4 cut(s) 438, 1764, 2240, 3033
MlsI TGGCCA 2 cut(s) 1230, 2275
MluNI TGGCCA 2 cut(s) 1230, 2275
MlyI GAGTC 7 cut(s) 209, 727, 893, 1186, 2556, 2586, 2657
MmeI TCCRAC 5 cut(s) 606, 630, 2070, 2112, 2786
Mox20I TGGCCA 2 cut(s) 1230, 2275
MroI TCCGGA 1 cut(s) 1577
MroXI GAANNNNTTC 1 cut(s) 1368
MscI TGGCCA 2 cut(s) 1230, 2275
MslI CAYNNNNRTG 2 cut(s) 1985, 3011
Msp20I TGGCCA 2 cut(s) 1230, 2275
MspA1I CMGCKG 2 cut(s) 1660, 2945
MspCI CTTAAG 3 cut(s) 1300, 1358, 3029
MspI CCGG 2 cut(s) 312, 1578
MspR9I CCNGG 5 cut(s) 147, 443, 617, 681, 1899
MunI CAATTG 1 cut(s) 1520
Mva1269I GAATGC 1 cut(s) 2487
MvaI CCWGG 5 cut(s) 147, 443, 617, 681, 1899
MwoI GCNNNNNNNGC 4 cut(s) 698, 1050, 1759, 2671
NlaIII CATG 8 cut(s) 117, 457, 1336, 1619, 1624, 2523, 2903, 3080
NlaIV GGNNCC 5 cut(s) 335, 533, 771, 2242, 2826
NmuCI GTSAC 6 cut(s) 513, 524, 587, 871, 1304, 1711
NspI RCATGY 2 cut(s) 457, 3080
NspV TTCGAA 1 cut(s) 836
PaeI GCATGC 1 cut(s) 457
PciI ACATGT 1 cut(s) 3076
PciSI GCTCTTC 1 cut(s) 1208
PctI GAATGC 1 cut(s) 2487
PdmI GAANNNNTTC 1 cut(s) 1368
PfoI TCCNGGA 3 cut(s) 441, 679, 1897
PkrI GCNGC 3 cut(s) 1870, 2380, 2944
PleI GAGTC 7 cut(s) 208, 726, 893, 1185, 2556, 2585, 2656
PpsI GAGTC 7 cut(s) 208, 726, 893, 1185, 2556, 2585, 2656
PpuMI RGGWCCY 2 cut(s) 1697, 1930
PscI ACATGT 1 cut(s) 3076
PshBI ATTAAT 1 cut(s) 2430
PsiI TTATAA 1 cut(s) 2436
Psp1406I AACGTT 1 cut(s) 2034
Psp5II RGGWCCY 2 cut(s) 1697, 1930
Psp6I CCWGG 5 cut(s) 145, 441, 615, 679, 1897
PspGI CCWGG 5 cut(s) 145, 441, 615, 679, 1897
PspN4I GGNNCC 5 cut(s) 335, 533, 771, 2242, 2826
PspPI GGNCC 9 cut(s) 531, 599, 1322, 1594, 1697, 1735, 1930, 2223, 2825
PspPPI RGGWCCY 2 cut(s) 1697, 1930
PstNI CAGNNNCTG 1 cut(s) 729
PsuI RGATCY 4 cut(s) 438, 1764, 2240, 3033
PvuII CAGCTG 2 cut(s) 1660, 2945
RsaI GTAC 8 cut(s) 163, 335, 771, 2004, 2125, 2770, 3002, 3098
RsaNI GTAC 8 cut(s) 162, 334, 770, 2003, 2124, 2769, 3001, 3097
RseI CAYNNNNRTG 2 cut(s) 1985, 3011
SapI GCTCTTC 1 cut(s) 1208
SatI GCNGC 3 cut(s) 1869, 2379, 2943
Sau96I GGNCC 9 cut(s) 531, 599, 1322, 1594, 1697, 1735, 1930, 2223, 2825
ScaI AGTACT 3 cut(s) 163, 2004, 2770
SchI GAGTC 7 cut(s) 209, 727, 893, 1186, 2556, 2586, 2657
ScrFI CCNGG 5 cut(s) 147, 443, 617, 681, 1899
SfaNI GCATC 8 cut(s) 854, 935, 1468, 1928, 2158, 2394, 2431, 2975
SfcI CTRYAG 2 cut(s) 1689, 1843
SfuI TTCGAA 1 cut(s) 836
SinI GGWCC 6 cut(s) 531, 1594, 1697, 1735, 1930, 2223
SmiMI CAYNNNNRTG 2 cut(s) 1985, 3011
SmlI CTYRAG 8 cut(s) 434, 715, 1300, 1358, 1433, 1564, 1925, 3029
SmoI CTYRAG 8 cut(s) 434, 715, 1300, 1358, 1433, 1564, 1925, 3029
SphI GCATGC 1 cut(s) 457
SsiI CCGC 2 cut(s) 2852, 2864
StyD4I CCNGG 5 cut(s) 145, 441, 615, 679, 1897
StyI CCWWGG 4 cut(s) 968, 1171, 1351, 2398
TaaI ACNGT 8 cut(s) 587, 1385, 2123, 2223, 2452, 2497, 2697, 2722
TaiI ACGT 1 cut(s) 2037
TaqI TCGA 5 cut(s) 60, 122, 836, 1935, 2383
TatI WGTACW 4 cut(s) 161, 2002, 2123, 2768
TseFI GTSAC 6 cut(s) 513, 524, 587, 871, 1304, 1711
TseI GCWGC 3 cut(s) 1868, 2378, 2942
Tsp45I GTSAC 6 cut(s) 513, 524, 587, 871, 1304, 1711
TspDTI ATGAA 3 cut(s) 989, 2489, 2787
TspGWI ACGGA 3 cut(s) 628, 1029, 2253
Vha464I CTTAAG 3 cut(s) 1300, 1358, 3029
VpaK11BI GGWCC 6 cut(s) 531, 1594, 1697, 1735, 1930, 2223
VspI ATTAAT 1 cut(s) 2430
XapI RAATTY 7 cut(s) 297, 369, 830, 950, 1260, 2685, 2757
XbaI TCTAGA 1 cut(s) 2068
XceI RCATGY 2 cut(s) 457, 3080
XmaJI CCTAGG 1 cut(s) 1351
XmiI GTMKAC 1 cut(s) 1850
XmnI GAANNNNTTC 1 cut(s) 1368
ZrmI AGTACT 3 cut(s) 163, 2004, 2770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.