Rmu_sc0005657.1_g000033

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005657.1
OG0000047
Physical Location & Seq
Reverse (-)
146156 .. 151397
5242 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005657.1_g000033.1.cds

Sequence Viewer

Length: 3192 bp
atgcccactctgttcctccatttcttccttttcttaatcactaccactgttactaaccttgtcccagtttacagcaactgcattgaagcccagcaacaatcattgctccatttcaagaaaagtcttataattgattctttcttttcctccaagcttatcacatggaattcgaacaccgactgctgttcttggctcggtgtaacttgcagcactaatgggcgtgttgtcggacttgacctcagttgggagtttgtctcatccagcattgacaattccagcagtcttttccaacttcaacaccttcagagcctcaatttagcctataacaacttcaatggctcttcaattccatctgcaattggcaagcttgcaaatttgaggtatttgaatttaactaaagctgatttttcagggcaaattcccattgaggttgcacgcttgacaaggttgaaggttcttgatctctctacagattaccattccgaggatggggggttaaaacttgagaacccaaatttaggcactttaatccagaaccttacagagcttacagatctaaatcttgattatctaaacctatcagctgagggaactgtatggagccaaaccatatcatcttcacttccaaagctgactgtgttgaccttgtatggttgtggtctttcaggccctattcatgaatcattggccaggcttcattctctatccatgttagtattggatgacaactacatctctggtccggttccaaaattcttcgccaatttttcaagcttgatttccttgagcctctctgattgtaacttgtatggagcatttcccaaagagatattccagttacctacactacagtctgttgtcctatcatataattcagagcttcgtggttccttaccagagtttcgaaagaatggatctctcgaatcccttcttctaacccggactaagttttcaggagtcttgccggactctatcggcaaccttaaaaatctgtctaaattagatctttcagagtgcaatttcacaggagcagttccaaagtcactggtaaacctaacacaattgtggtctttggacttgtcatccagcaagttttctagttcgattaattctattcaatgggacaaactcatcaagcttgagtatctccacttgtctgacaatctactctacgggagtattccattgtctcccttttctattcccttgctgcagaggttagatctttctagaaatcacttctctggtcagttgcttgaattttctaatgtctcttcgtacttgctgtcctatcttgatttgagtagcaacaatttggaaggatcaatacccgtgtctatctttaatcttccaatgcttcaagagtttaatctttcttggaacaacttgagtggttttcctttttatggccttcaggagtcgagaaatctttcgtctcttgatctatcctacaatagcttgttgttcaatcataatggtaccaactcatcactgcactccctccagattcagagtttgtttttggcttctaacaagttgaaaacattcccaagtttcctgaaaaatcaatcttatttaaccaacttggacctttcagacaaccagattccaggtcagatacccaattggatttgggatcttcatctcaagaatctatatctaccgtgtaacaagttggtaagtttagaagcttctttacttggttctacttaccatctgatgattcttgatcttcactcgaaccagattcagggacaaataccatcgtttgttagtggttattatttggattactcaggaaataatttcagctctagtatgccaattcacattggtgatttcatatcttccacgggctacctctctctttcaagtagtaacttgtctggggaaattccaaattcaatatgcaatgcaagtggtcaagttcttgatctctctaataactctttgagtggaaccattccccaatgcttgactcagacttctctttttgtcgttgatttgaggagaaacaaccttactggatctatccccgatacttttcttgaaggttgtccgttgcaaactcttgctctgagcagaaatcagatacaaggtccatttccaaaatctctagccaattgttcaagcttagaggttttagaccttggaatcaatcaaataacagatgcatttccctgcttgttgaagaccatatccagcttgtgtgtccttatgttgcgatccaacaaattttatggacctattggatgtcccgagaccaaaggcacctggccgaagcttcaaatcatagacttagctcataacagtttcaatggtgaaataccaggtacatcattgacaacatggcaagcaatgatggttaatgaagatggttacaaagatccccttagctttttttttcaaggtggtgatagctatagagatgcagtgacaactacaagcaaaggtctagagatggatcttgtaaagattttaaccatcttcacttcaattgacttctctgctaataagttcaacggaacaatacccaaggaattgggtcaactgagatcattacttgtcctcaatctgtccagtaatgccttcaccggcgaaatcccatcatcctttagtaacatgagaagcatagagtccttagacctctcacagaaccacctgagcggccatattccaccacagtttgcaaatctcactttcctttcgtacttgaatgtctcatataatcaactgacaggaaggatcccaaccagcactcagttttcaacatttccaaatacctccttcgagggtaataaaggattatgggggcctcctcttacatcggatacagcaatcatattgccacctccaacgttaattggaagctcaagtaatccgaattctggagatgacattgattggaatgttatcagtgctgaagttggatttacatgtgggtttggaattgccgtcgggtcacttctgttttgcaagaaatggaggaaatggtattacagagctatgtttaaaatcctgttcaagatattccctcagctggaacacagatttggtaatcacagaaggcatgtttacataaatcaaaggtctgctgcaaagaagttagggaagaaatttgctacaggagcttctgttgtcaaggggccaactgagaaggaccaaattgatgttcaaggggatatattttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1063

Amino Acids

117.53

Weight (kDa)

6.07

Isoelectric Point (pI)

32.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 128
Acc65I GGTACC 1 cut(s) 1478
AccB1I GGYRCC 2 cut(s) 1478, 2270
AccBSI CCGCTC 1 cut(s) 2667
AciI CCGC 1 cut(s) 2667
AclI AACGTT 1 cut(s) 2858
AclWI GGATC 9 cut(s) 922, 1330, 1644, 2035, 2220, 2381, 2472, 2740, 2753
AcoI YGGCCR 3 cut(s) 687, 2276, 2668
AcuI CTGAAG 3 cut(s) 287, 1397, 2943
AfaI GTAC 4 cut(s) 1280, 1480, 2335, 2711
AfiI CCNNNNNNNGG 8 cut(s) 244, 484, 489, 518, 1406, 1750, 2888, 3040
AflIII ACRYGT 1 cut(s) 2936
AjnI CCWGG 4 cut(s) 689, 1609, 2273, 2329
AjuI GAANNNNNNNTTGG 6 cut(s) 815, 847, 3036, 3068, 3156, 3188
AleI CACNNNNGTG 2 cut(s) 1063, 1833
Alw26I GTCTC 6 cut(s) 259, 1194, 1276, 1440, 2255, 2725
AlwI GGATC 9 cut(s) 922, 1330, 1644, 2035, 2220, 2381, 2472, 2740, 2753
AlwNI CAGNNNCTG 1 cut(s) 78
Ama87I CYCGRG 1 cut(s) 2258
AoxI GGCC 7 cut(s) 667, 687, 1408, 2276, 2668, 2813, 3146
ApeKI GCWGC 3 cut(s) 207, 1210, 3095
AseI ATTAAT 1 cut(s) 1107
Asp700I GAANNNNTTC 3 cut(s) 927, 1429, 1544
Asp718I GGTACC 1 cut(s) 1478
AspS9I GGNCC 8 cut(s) 668, 740, 1588, 2099, 2243, 2813, 3146, 3160
AsuC2I CCSGG 1 cut(s) 940
AsuHPI GGTGA 4 cut(s) 1847, 2333, 2426, 2584
AsuII TTCGAA 2 cut(s) 170, 904
AvaI CYCGRG 1 cut(s) 2258
AvaII GGWCC 5 cut(s) 740, 1588, 2099, 2243, 3160
BalI TGGCCA 1 cut(s) 689
BamHI GGATCC 1 cut(s) 2745
BanI GGYRCC 2 cut(s) 1478, 2270
BarI GAAGNNNNNNTAC 4 cut(s) 1311, 1343, 1680, 1712
BbsI GAAGAC 1 cut(s) 2198
BbvCI CCTCAGC 2 cut(s) 585, 3036
BbvI GCAGC 3 cut(s) 219, 1197, 3082
BccI CCATC 9 cut(s) 358, 482, 1722, 1771, 2356, 2369, 2455, 2492, 2614
BceAI ACGGC 1 cut(s) 2939
BciT130I CCWGG 4 cut(s) 691, 1611, 2275, 2331
BciVI GTATCC 1 cut(s) 2824
BcnI CCSGG 1 cut(s) 940
BcoDI GTCTC 6 cut(s) 259, 1194, 1276, 1440, 2255, 2725
BfaI CTAG 5 cut(s) 1098, 1230, 1815, 2117, 2456
BfmI CTRYAG 5 cut(s) 468, 848, 1211, 2422, 3123
BfuI GTATCC 1 cut(s) 2824
BglII AGATCT 3 cut(s) 553, 1003, 1222
BisI GCNGC 4 cut(s) 208, 1211, 2668, 3096
BlsI GCNGC 4 cut(s) 209, 1212, 2669, 3097
Bme1390I CCNGG 5 cut(s) 691, 940, 1611, 2275, 2331
Bme18I GGWCC 5 cut(s) 740, 1588, 2099, 2243, 3160
BmeT110I CYCGRG 1 cut(s) 2258
BmgT120I GGNCC 8 cut(s) 668, 740, 1588, 2099, 2243, 2813, 3146, 3160
BmiI GGNNCC 9 cut(s) 602, 747, 889, 1480, 1960, 2272, 2747, 2814, 3147
BmrFI CCNGG 5 cut(s) 691, 940, 1611, 2275, 2331
BmrI ACTGGG 1 cut(s) 59
BmsI GCATC 2 cut(s) 2161, 2419
BmuI ACTGGG 1 cut(s) 59
BpiI GAAGAC 1 cut(s) 2198
BplI GAGNNNNNCTC 2 cut(s) 239, 271
BpmI CTGGAG 2 cut(s) 1487, 2910
Bpu10I CCTNAGC 4 cut(s) 585, 2393, 2663, 3036
Bpu14I TTCGAA 2 cut(s) 170, 904
BpuEI CTTGAG 6 cut(s) 524, 805, 1160, 1408, 1631, 2857
BpuMI CCSGG 1 cut(s) 940
BsaBI GATNNNNATC 2 cut(s) 558, 1641
BsaI GGTCTC 1 cut(s) 2255
BsaJI CCNNGG 4 cut(s) 483, 1851, 2149, 2535
BsaWI WCCGGW 1 cut(s) 742
BsaXI ACNNNNNCTCC 2 cut(s) 3120, 3150
Bsc4I CCNNNNNNNGG 8 cut(s) 244, 484, 489, 518, 1406, 1750, 2888, 3040
Bse118I RCCGGY 1 cut(s) 2594
Bse1I ACTGG 5 cut(s) 65, 835, 1050, 2029, 2580
Bse3DI GCAATG 3 cut(s) 101, 1918, 2364
Bse8I GATNNNNATC 2 cut(s) 558, 1641
BseBI CCWGG 4 cut(s) 691, 1611, 2275, 2331
BseDI CCNNGG 4 cut(s) 483, 1851, 2149, 2535
BseGI GGATG 6 cut(s) 257, 493, 727, 1082, 2258, 2609
BseJI GATNNNNATC 2 cut(s) 558, 1641
BseLI CCNNNNNNNGG 8 cut(s) 244, 484, 489, 518, 1406, 1750, 2888, 3040
BseMI GCAATG 3 cut(s) 101, 1918, 2364
BseNI ACTGG 5 cut(s) 65, 835, 1050, 2029, 2580
BseRI GAGGAG 2 cut(s) 2023, 2808
BseXI GCAGC 3 cut(s) 219, 1197, 3082
BseYI CCCAGC 1 cut(s) 90
BsgI GTGCAG 1 cut(s) 1478
BshFI GGCC 7 cut(s) 669, 689, 1410, 2278, 2670, 2815, 3148
BshNI GGYRCC 2 cut(s) 1478, 2270
BsiHKCI CYCGRG 1 cut(s) 2258
BsiSI CCGG 4 cut(s) 743, 940, 965, 2595
BslFI GGGAC 4 cut(s) 47, 1136, 1767, 2241
BslI CCNNNNNNNGG 8 cut(s) 244, 484, 489, 518, 1406, 1750, 2888, 3040
BsmAI GTCTC 6 cut(s) 259, 1194, 1276, 1440, 2255, 2725
BsmBI CGTCTC 1 cut(s) 1440
BsmFI GGGAC 4 cut(s) 47, 1136, 1767, 2241
BsnI GGCC 7 cut(s) 669, 689, 1410, 2278, 2670, 2815, 3148
Bso31I GGTCTC 1 cut(s) 2255
BsoBI CYCGRG 1 cut(s) 2258
Bsp119I TTCGAA 2 cut(s) 170, 904
BspACI CCGC 1 cut(s) 2667
BspANI GGCC 7 cut(s) 669, 689, 1410, 2278, 2670, 2815, 3148
BspHI TCATGA 1 cut(s) 676
BspLI GGNNCC 9 cut(s) 602, 747, 889, 1480, 1960, 2272, 2747, 2814, 3147
BspMAI CTGCAG 1 cut(s) 1215
BspPI GGATC 9 cut(s) 922, 1330, 1644, 2035, 2220, 2381, 2472, 2740, 2753
BspQI GCTCTTC 1 cut(s) 346
BspT104I TTCGAA 2 cut(s) 170, 904
BspT107I GGYRCC 2 cut(s) 1478, 2270
BspTNI GGTCTC 1 cut(s) 2255
BsrBI CCGCTC 1 cut(s) 2667
BsrDI GCAATG 3 cut(s) 101, 1918, 2364
BsrFI RCCGGY 1 cut(s) 2594
BsrI ACTGG 5 cut(s) 65, 835, 1050, 2029, 2580
BssAI RCCGGY 1 cut(s) 2594
BssECI CCNNGG 4 cut(s) 483, 1851, 2149, 2535
BssT1I CCWWGG 2 cut(s) 2149, 2535
Bst2UI CCWGG 4 cut(s) 691, 1611, 2275, 2331
Bst4CI ACNGT 7 cut(s) 49, 595, 637, 852, 1665, 2312, 2685
Bst6I CTCTTC 2 cut(s) 346, 1279
BstBI TTCGAA 2 cut(s) 170, 904
BstC8I GCNNGC 4 cut(s) 365, 369, 436, 2355
BstDSI CCRYGG 1 cut(s) 1851
BstF5I GGATG 6 cut(s) 257, 493, 727, 1082, 2258, 2609
BstMAI GTCTC 6 cut(s) 259, 1194, 1276, 1440, 2255, 2725
BstMWI GCNNNNNNNGC 1 cut(s) 3128
BstNI CCWGG 4 cut(s) 691, 1611, 2275, 2331
BstNSI RCATGY 2 cut(s) 2940, 3074
BstSCI CCNGG 5 cut(s) 689, 938, 1609, 2273, 2329
BstSFI CTRYAG 5 cut(s) 468, 848, 1211, 2422, 3123
BstV1I GCAGC 3 cut(s) 219, 1197, 3082
BstV2I GAAGAC 1 cut(s) 2198
BstX2I RGATCY 9 cut(s) 553, 914, 1003, 1222, 1636, 2027, 2386, 2464, 2745
BstXI CCANNNNNNTGG 1 cut(s) 2542
BstYI RGATCY 9 cut(s) 553, 914, 1003, 1222, 1636, 2027, 2386, 2464, 2745
BsuI GTATCC 1 cut(s) 2824
BsuRI GGCC 7 cut(s) 669, 689, 1410, 2278, 2670, 2815, 3148
BtgI CCRYGG 1 cut(s) 1851
BtsCI GGATG 6 cut(s) 257, 493, 727, 1082, 2258, 2609
BtsI GCAGTG 2 cut(s) 1490, 2439
BtsIMutI CAGTG 5 cut(s) 45, 1043, 1490, 2439, 2923
Cac8I GCNNGC 4 cut(s) 365, 369, 436, 2355
CaiI CAGNNNCTG 1 cut(s) 78
CciI TCATGA 1 cut(s) 676
Cfr10I RCCGGY 1 cut(s) 2594
Cfr13I GGNCC 8 cut(s) 668, 740, 1588, 2099, 2243, 2813, 3146, 3160
CsiI ACCWGGT 1 cut(s) 2329
Csp6I GTAC 4 cut(s) 1279, 1479, 2334, 2710
CspCI CAANNNNNGTGG 4 cut(s) 1372, 1407, 1900, 1935
CviAII CATG 7 cut(s) 162, 677, 709, 2349, 2623, 2937, 3071
CviQI GTAC 4 cut(s) 1279, 1479, 2334, 2710
DraI TTTAAA 1 cut(s) 3013
EaeI YGGCCR 3 cut(s) 687, 2276, 2668
Eam1104I CTCTTC 2 cut(s) 346, 1279
EarI CTCTTC 2 cut(s) 346, 1279
Eco130I CCWWGG 2 cut(s) 2149, 2535
Eco31I GGTCTC 1 cut(s) 2255
Eco47I GGWCC 5 cut(s) 740, 1588, 2099, 2243, 3160
Eco57I CTGAAG 3 cut(s) 287, 1397, 2943
Eco88I CYCGRG 1 cut(s) 2258
EcoO109I RGGNCCY 2 cut(s) 668, 2813
EcoRI GAATTC 2 cut(s) 166, 2884
EcoRII CCWGG 4 cut(s) 689, 1609, 2273, 2329
EcoT14I CCWWGG 2 cut(s) 2149, 2535
EcoT22I ATGCAT 1 cut(s) 2176
ErhI CCWWGG 2 cut(s) 2149, 2535
Esp3I CGTCTC 1 cut(s) 1440
FaeI CATG 7 cut(s) 165, 680, 712, 2352, 2626, 2940, 3074
FalI AAGNNNNNCTT 2 cut(s) 2376, 2408
FaqI GGGAC 4 cut(s) 47, 1136, 1767, 2241
FatI CATG 7 cut(s) 161, 676, 708, 2348, 2622, 2936, 3070
Fnu4HI GCNGC 4 cut(s) 208, 1211, 2668, 3096
FokI GGATG 6 cut(s) 244, 500, 734, 1069, 2265, 2596
Fsp4HI GCNGC 4 cut(s) 208, 1211, 2668, 3096
FspBI CTAG 5 cut(s) 1098, 1230, 1815, 2117, 2456
GluI GCNGC 4 cut(s) 208, 1211, 2668, 3096
GsaI CCCAGC 1 cut(s) 94
GsuI CTGGAG 2 cut(s) 1487, 2910
HaeIII GGCC 7 cut(s) 669, 689, 1410, 2278, 2670, 2815, 3148
HapII CCGG 4 cut(s) 743, 940, 965, 2595
Hin1II CATG 7 cut(s) 165, 680, 712, 2352, 2626, 2940, 3074
HincII GTYRAC 2 cut(s) 642, 2549
HindII GTYRAC 2 cut(s) 642, 2549
HindIII AAGCTT 7 cut(s) 152, 365, 772, 1136, 1689, 2131, 2282
HpaII CCGG 4 cut(s) 743, 940, 965, 2595
HphI GGTGA 4 cut(s) 1847, 2333, 2426, 2584
Hpy166II GTNNAC 5 cut(s) 70, 642, 1051, 2549, 3076
Hpy8I GTNNAC 5 cut(s) 70, 642, 1051, 2549, 3076
Hpy99I CGWCG 1 cut(s) 2960
HpyCH4III ACNGT 7 cut(s) 49, 595, 637, 852, 1665, 2312, 2685
HpyCH4IV ACGT 1 cut(s) 2858
HpyF10VI GCNNNNNNNGC 1 cut(s) 3128
HpySE526I ACGT 1 cut(s) 2858
Hsp92II CATG 7 cut(s) 165, 680, 712, 2352, 2626, 2940, 3074
KpnI GGTACC 1 cut(s) 1482
LguI GCTCTTC 1 cut(s) 346
LmnI GCTCC 5 cut(s) 111, 600, 812, 1028, 3128
Lsp1109I GCAGC 3 cut(s) 219, 1197, 3082
LweI GCATC 2 cut(s) 2161, 2419
MabI ACCWGGT 1 cut(s) 2329
MaeI CTAG 5 cut(s) 1098, 1230, 1815, 2117, 2456
MaeII ACGT 1 cut(s) 2858
MbiI CCGCTC 1 cut(s) 2667
MfeI CAATTG 5 cut(s) 357, 1061, 1624, 2122, 2496
MflI RGATCY 9 cut(s) 553, 914, 1003, 1222, 1636, 2027, 2386, 2464, 2745
MlsI TGGCCA 1 cut(s) 689
MluNI TGGCCA 1 cut(s) 689
MlyI GAGTC 5 cut(s) 962, 966, 1427, 1972, 2645
MmeI TCCRAC 5 cut(s) 208, 313, 2253, 2879, 2908
Mox20I TGGCCA 1 cut(s) 689
Mph1103I ATGCAT 1 cut(s) 2176
MroXI GAANNNNTTC 3 cut(s) 927, 1429, 1544
MscI TGGCCA 1 cut(s) 689
MslI CAYNNNNRTG 2 cut(s) 1063, 1833
Msp20I TGGCCA 1 cut(s) 689
MspA1I CMGCKG 2 cut(s) 584, 3040
MspI CCGG 4 cut(s) 743, 940, 965, 2595
MspR9I CCNGG 5 cut(s) 691, 940, 1611, 2275, 2331
MunI CAATTG 5 cut(s) 357, 1061, 1624, 2122, 2496
MvaI CCWGG 4 cut(s) 691, 1611, 2275, 2331
MwoI GCNNNNNNNGC 1 cut(s) 3128
NciI CCSGG 1 cut(s) 940
NlaIII CATG 7 cut(s) 165, 680, 712, 2352, 2626, 2940, 3074
NlaIV GGNNCC 9 cut(s) 602, 747, 889, 1480, 1960, 2272, 2747, 2814, 3147
NmuCI GTSAC 3 cut(s) 1041, 2434, 2961
NsiI ATGCAT 1 cut(s) 2176
NspI RCATGY 2 cut(s) 2940, 3074
NspV TTCGAA 2 cut(s) 170, 904
OliI CACNNNNGTG 2 cut(s) 1063, 1833
PagI TCATGA 1 cut(s) 676
PciI ACATGT 1 cut(s) 2936
PciSI GCTCTTC 1 cut(s) 346
PdmI GAANNNNTTC 3 cut(s) 927, 1429, 1544
PfeI GAWTC 9 cut(s) 134, 680, 923, 1507, 1606, 1651, 1723, 1747, 2154
PkrI GCNGC 4 cut(s) 209, 1212, 2669, 3097
PleI GAGTC 5 cut(s) 962, 965, 1426, 1972, 2644
PpsI GAGTC 5 cut(s) 962, 965, 1426, 1972, 2644
PscI ACATGT 1 cut(s) 2936
PshBI ATTAAT 1 cut(s) 1107
PsiI TTATAA 1 cut(s) 128
Psp1406I AACGTT 1 cut(s) 2858
Psp6I CCWGG 4 cut(s) 689, 1609, 2273, 2329
PspFI CCCAGC 1 cut(s) 90
PspGI CCWGG 4 cut(s) 689, 1609, 2273, 2329
PspN4I GGNNCC 9 cut(s) 602, 747, 889, 1480, 1960, 2272, 2747, 2814, 3147
PspPI GGNCC 8 cut(s) 668, 740, 1588, 2099, 2243, 2813, 3146, 3160
PstI CTGCAG 1 cut(s) 1215
PstNI CAGNNNCTG 1 cut(s) 78
PsuI RGATCY 9 cut(s) 553, 914, 1003, 1222, 1636, 2027, 2386, 2464, 2745
PvuII CAGCTG 2 cut(s) 584, 3040
RsaI GTAC 4 cut(s) 1280, 1480, 2335, 2711
RsaNI GTAC 4 cut(s) 1279, 1479, 2334, 2710
RseI CAYNNNNRTG 2 cut(s) 1063, 1833
SapI GCTCTTC 1 cut(s) 346
SatI GCNGC 4 cut(s) 208, 1211, 2668, 3096
Sau96I GGNCC 8 cut(s) 668, 740, 1588, 2099, 2243, 2813, 3146, 3160
SchI GAGTC 5 cut(s) 962, 966, 1427, 1972, 2645
ScrFI CCNGG 5 cut(s) 691, 940, 1611, 2275, 2331
SexAI ACCWGGT 1 cut(s) 2329
SfaNI GCATC 2 cut(s) 2161, 2419
SfcI CTRYAG 5 cut(s) 468, 848, 1211, 2422, 3123
SfuI TTCGAA 2 cut(s) 170, 904
SgrAI CRCCGGYG 1 cut(s) 2594
SinI GGWCC 5 cut(s) 740, 1588, 2099, 2243, 3160
SmiMI CAYNNNNRTG 2 cut(s) 1063, 1833
SmlI CTYRAG 6 cut(s) 503, 784, 1139, 1387, 1646, 2872
SmoI CTYRAG 6 cut(s) 503, 784, 1139, 1387, 1646, 2872
SsiI CCGC 1 cut(s) 2667
SspMI CTAG 5 cut(s) 1098, 1230, 1815, 2117, 2456
StyD4I CCNGG 5 cut(s) 689, 938, 1609, 2273, 2329
StyI CCWWGG 2 cut(s) 2149, 2535
TaaI ACNGT 7 cut(s) 49, 595, 637, 852, 1665, 2312, 2685
TaiI ACGT 1 cut(s) 2861
TaqI TCGA 7 cut(s) 170, 904, 921, 1103, 1421, 1739, 2790
TauI GCSGC 1 cut(s) 2670
TfiI GAWTC 9 cut(s) 134, 680, 923, 1507, 1606, 1651, 1723, 1747, 2154
TscAI CASTG 5 cut(s) 52, 1050, 1497, 2439, 2923
TseFI GTSAC 3 cut(s) 1041, 2434, 2961
TseI GCWGC 3 cut(s) 207, 1210, 3095
Tsp45I GTSAC 3 cut(s) 1041, 2434, 2961
TspDTI ATGAA 6 cut(s) 665, 686, 693, 1631, 1831, 2385
TspGWI ACGGA 2 cut(s) 2049, 2538
TspRI CASTG 5 cut(s) 52, 1050, 1497, 2439, 2923
VpaK11BI GGWCC 5 cut(s) 740, 1588, 2099, 2243, 3160
VspI ATTAAT 1 cut(s) 1107
XbaI TCTAGA 2 cut(s) 1229, 2455
XceI RCATGY 2 cut(s) 2940, 3074
XcmI CCANNNNNNNNNTGG 2 cut(s) 485, 715
XmnI GAANNNNTTC 3 cut(s) 927, 1429, 1544
XspI CTAG 5 cut(s) 1098, 1230, 1815, 2117, 2456
Zsp2I ATGCAT 1 cut(s) 2176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.