RLG00000023673

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
27007858 .. 27011369
3512 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023673

Sequence Viewer

Length: 2295 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCCTATTCACTACCACTGTTACTAACCTTATCCCCGCAGTTCACAGCAACTGCATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAGAAAAGTCTTGTAATTGATTCTTTCAAATCCTCCAAGCTTATCACATGGAATTCGAGTACAGATTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGCGTGTTGTTGGACTTGACCTCAGCCGGGAGTTTGTCTCATCCAGCATTGACAATTCTAGCAGTCTTTTCCAACTTCAACATCTTCAGAGCCTCAATTTAGCCTATACTAACTTCATGGGCTATTCAATTCCATCTGCAATCGGAAAGCTTGCAAATTTGAGGCTTGATTCTCTATCCACGTTAATATTGGATGGAAACAATATCTCTGGTCCTGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCTGAAAGTAACATCCATGGAGCATTTCCCAAAGAGATATTCCAGGTACCTACACTACAGTCTGTTGACCTATCAGCTAATTCAGAGCTTCGTGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAATCCGTAGTTCTATCCGGGACTAAGTTCTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTAAAATGCTGTCTGAATTGGATCTTAGAGAATGCAATTTCACAGGAGCAGTTCCAAAGTCATTGGCCAACCTAACACAATTGGGGCATTTGTACTTGTCATCCAACAAGTTTTCTAGTCCGATTAATTCTATTCAATGGGACAAACTCATCAAACTTGTGGATCTCGACTTGTCCGACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTCTCTATTCCCTTGCTGCGGAGCTTACTACTTTCTGGAAATCACTTCTCTGGTCAGTTGCTTGAATTTTCTAATGTCTCTTCGTCCTCGCTACTCTCTCTTGATTTGAGAAATAACTTGTATGGGGAAATTCCAAAATCAATATGCAATGCAAGTGGTCAAGTTCTTGATCTCTCTAATAACTCTTTCAGTGGAATCATTCCCCAATGCTTGACTCAGACTTCTCTTTTGGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCCGATACTTTTCTTGAAGGTTGTATGTTGCAAACTCTAGCTCTGGGCAGAAATCAGATACAAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCCTTAGAGCTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCCTGCCTGTTGAAGACCATATCCACCTTGCGTGTTCTTATTTTGCGATCCAACAAATTTTATGGACCCATTGGATGTCCCAAGACCAATGGCACCTGGCCGAACCTTCAAGTCATAGATTTGGCTCTTAATAGTTTCAATGGTGAAATAACAGGTACATCATTGAGAACATGGCAAGCAATGATGGTTAATGAAGGCTCCGAGTACCTTGGGTTTTGGTGGGGAGTTGGTCCTCGAGGAGGGCCTCTTATTGATTATGGTGATGTAATAACAACAACAAGCAAAGGTCTAGAGATGGATCTTGTTCCTTTAACTAGCTTCACTTCGATTGACTTCTCTGCTAACAAGTTTAACGGAACAATACCCAAGGAAATCGGCCAATTGACATCATTACATGTCCTCAATCTGTCCAGTAATGTTTTCACAGGCAAAATCCCATCATCCTTTGGTAACATGAAAAGCATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGCGGCCAAATTCCACAGCAGCTTGCTGCAAATCTCAATTTCCTTTCATACTTGAATGTCTCATATAATCAACTGACGGGAAGAATCCCAACGAGCACTCAGTTTTCGACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATGCAGTAATCGTATCGCCACCTCCGACATTAAATGGAAGCTCAAGTAATCCGAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGATTTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGAGCTATGTTTAAAATCTTGTTCAAGATATTCCCTCAGTTGGAACACAGATTTGGTAATCACAGAAGGCATTGCCAAGATTTCAGCCTTCCCCAAAACCGCCTGGAAGCAGTAGGCCCAAAAGGCCCGTCGTTGTACAAAGCAAGTAAAATACCCGTCGTTGGCTTCGAGCCTTCGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

765

Amino Acids

83.66

Weight (kDa)

7.53

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 4.2e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 131 - 188 2.2e-07 Leucine rich repeat
LRR_8 PF13855 203 - 262 2e-06 Leucine rich repeat
LRR_14 PF23598 209 - 261 8.2e-06 Leucine-rich repeat region
LRR_8 PF13855 542 - 597 1.1e-06 Leucine rich repeat
LRR_8 PF13855 562 - 622 1.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1530
Acc65I GGTACC 1 cut(s) 529
AccB1I GGYRCC 2 cut(s) 529, 1388
AccB7I CCANNNNNTGG 1 cut(s) 602
AccBSI CCGCTC 1 cut(s) 1794
AciI CCGC 4 cut(s) 66, 904, 1794, 2212
AclWI GGATC 6 cut(s) 613, 702, 843, 1156, 1338, 1602
AcoI YGGCCR 4 cut(s) 738, 1394, 1672, 1795
AcsI RAATTY 8 cut(s) 169, 376, 443, 950, 1014, 1352, 1800, 2014
AcuI CTGAAG 1 cut(s) 290
AfaI GTAC 7 cut(s) 178, 531, 767, 1453, 1502, 2108, 2249
AfiI CCNNNNNNNGG 7 cut(s) 247, 602, 903, 1535, 2018, 2152, 2273
AflIII ACRYGT 1 cut(s) 1690
AjnI CCWGG 3 cut(s) 525, 1391, 2214
AjuI GAANNNNNNNTTGG 4 cut(s) 506, 538, 2148, 2180
Alw21I GWGCWC 1 cut(s) 1889
Alw26I GTCTC 5 cut(s) 262, 485, 885, 967, 1855
AlwI GGATC 6 cut(s) 613, 702, 843, 1156, 1338, 1602
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 1530
AoxI GGCC 8 cut(s) 738, 1394, 1538, 1672, 1795, 1943, 2227, 2236
ApeKI GCWGC 4 cut(s) 210, 901, 1810, 1817
ApoI RAATTY 8 cut(s) 169, 376, 443, 950, 1014, 1352, 1800, 2014
ArsI GACNNNNNNTTYG 4 cut(s) 1096, 1128, 2225, 2257
AseI ATTAAT 1 cut(s) 798
Asp718I GGTACC 1 cut(s) 529
AspS9I GGNCC 8 cut(s) 431, 1117, 1361, 1526, 1538, 1943, 2228, 2237
AsuC2I CCSGG 2 cut(s) 248, 631
AsuHPI GGTGA 2 cut(s) 1451, 1568
AvaI CYCGRG 1 cut(s) 1530
AvaII GGWCC 4 cut(s) 431, 1117, 1361, 1526
BalI TGGCCA 1 cut(s) 740
BanI GGYRCC 2 cut(s) 529, 1388
BbsI GAAGAC 1 cut(s) 1316
Bbv12I GWGCWC 1 cut(s) 1889
BbvCI CCTCAGC 1 cut(s) 242
BbvI GCAGC 4 cut(s) 222, 888, 1804, 1822
BccI CCATC 6 cut(s) 361, 407, 1474, 1585, 1741, 2088
BceAI ACGGC 1 cut(s) 2051
BciT130I CCWGG 3 cut(s) 527, 1393, 2216
BcnI CCSGG 2 cut(s) 248, 631
BcoDI GTCTC 5 cut(s) 262, 485, 885, 967, 1855
BfaI CTAG 6 cut(s) 279, 789, 1193, 1238, 1586, 1611
BfmI CTRYAG 2 cut(s) 539, 2110
BglI GCCNNNNNGGC 1 cut(s) 2235
BisI GCNGC 5 cut(s) 211, 902, 1795, 1811, 1818
BlsI GCNGC 5 cut(s) 212, 903, 1796, 1812, 1819
Bme1390I CCNGG 5 cut(s) 248, 527, 631, 1393, 2216
Bme18I GGWCC 4 cut(s) 431, 1117, 1361, 1526
BmeT110I CYCGRG 1 cut(s) 1530
BmgT120I GGNCC 8 cut(s) 431, 1117, 1361, 1526, 1538, 1943, 2228, 2237
BmiI GGNNCC 6 cut(s) 531, 580, 1363, 1390, 1495, 1944
BmrFI CCNGG 5 cut(s) 248, 527, 631, 1393, 2216
BmsI GCATC 2 cut(s) 1279, 1951
BpiI GAAGAC 1 cut(s) 1316
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2040
Bpu10I CCTNAGC 2 cut(s) 242, 1790
BpuEI CTTGAG 2 cut(s) 496, 1987
BpuMI CCSGG 2 cut(s) 248, 631
BsaJI CCNNGG 4 cut(s) 499, 1267, 1504, 1662
BsaWI WCCGGW 1 cut(s) 586
Bsc4I CCNNNNNNNGG 7 cut(s) 247, 602, 903, 1535, 2018, 2152, 2273
Bse1I ACTGG 2 cut(s) 1150, 1707
Bse3DI GCAATG 4 cut(s) 104, 1039, 1482, 2182
BseBI CCWGG 3 cut(s) 527, 1393, 2216
BseDI CCNNGG 4 cut(s) 499, 1267, 1504, 1662
BseGI GGATG 7 cut(s) 260, 418, 495, 773, 1376, 1736, 1966
BseLI CCNNNNNNNGG 7 cut(s) 247, 602, 903, 1535, 2018, 2152, 2273
BseMI GCAATG 4 cut(s) 104, 1039, 1482, 2182
BseMII CTCAG 6 cut(s) 256, 657, 1115, 1781, 1904, 2162
BseNI ACTGG 2 cut(s) 1150, 1707
BseRI GAGGAG 3 cut(s) 1144, 1548, 1938
BseXI GCAGC 4 cut(s) 222, 888, 1804, 1822
BshFI GGCC 8 cut(s) 740, 1396, 1540, 1674, 1797, 1945, 2229, 2238
BshNI GGYRCC 2 cut(s) 529, 1388
BsiHKAI GWGCWC 1 cut(s) 1889
BsiHKCI CYCGRG 1 cut(s) 1530
BsiSI CCGG 4 cut(s) 247, 587, 630, 656
BslFI GGGAC 3 cut(s) 646, 827, 1359
BslI CCNNNNNNNGG 7 cut(s) 247, 602, 903, 1535, 2018, 2152, 2273
BsmAI GTCTC 5 cut(s) 262, 485, 885, 967, 1855
BsmFI GGGAC 3 cut(s) 646, 827, 1359
BsmI GAATGC 1 cut(s) 710
BsnI GGCC 8 cut(s) 740, 1396, 1540, 1674, 1797, 1945, 2229, 2238
BsoBI CYCGRG 1 cut(s) 1530
Bsp1286I GDGCHC 1 cut(s) 1889
Bsp1407I TGTACA 1 cut(s) 2247
Bsp143I GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
Bsp19I CCATGG 1 cut(s) 499
BspACI CCGC 4 cut(s) 66, 904, 1794, 2212
BspANI GGCC 8 cut(s) 740, 1396, 1540, 1674, 1797, 1945, 2229, 2238
BspCNI CTCAG 6 cut(s) 255, 656, 1114, 1782, 1903, 2161
BspLI GGNNCC 6 cut(s) 531, 580, 1363, 1390, 1495, 1944
BspPI GGATC 6 cut(s) 613, 702, 843, 1156, 1338, 1602
BspT107I GGYRCC 2 cut(s) 529, 1388
BsrBI CCGCTC 1 cut(s) 1794
BsrDI GCAATG 4 cut(s) 104, 1039, 1482, 2182
BsrGI TGTACA 1 cut(s) 2247
BsrI ACTGG 2 cut(s) 1150, 1707
BssECI CCNNGG 4 cut(s) 499, 1267, 1504, 1662
BssMI GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
BssT1I CCWWGG 4 cut(s) 499, 1267, 1504, 1662
Bst2UI CCWGG 3 cut(s) 527, 1393, 2216
Bst4CI ACNGT 2 cut(s) 49, 543
Bst6I CTCTTC 1 cut(s) 970
BstAUI TGTACA 1 cut(s) 2247
BstC8I GCNNGC 3 cut(s) 372, 1473, 1815
BstDSI CCRYGG 1 cut(s) 499
BstENI CCTNNNNNAGG 1 cut(s) 1533
BstF5I GGATG 7 cut(s) 260, 418, 495, 773, 1376, 1736, 1966
BstKTI GATC 7 cut(s) 608, 697, 838, 1057, 1151, 1346, 1597
BstMAI GTCTC 5 cut(s) 262, 485, 885, 967, 1855
BstMBI GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
BstMWI GCNNNNNNNGC 1 cut(s) 2235
BstNI CCWGG 3 cut(s) 527, 1393, 2216
BstNSI RCATGY 1 cut(s) 1694
BstSCI CCNGG 5 cut(s) 246, 525, 629, 1391, 2214
BstSFI CTRYAG 2 cut(s) 539, 2110
BstV1I GCAGC 4 cut(s) 222, 888, 1804, 1822
BstV2I GAAGAC 1 cut(s) 1316
BstX2I RGATCY 5 cut(s) 605, 694, 835, 1148, 1594
BstYI RGATCY 5 cut(s) 605, 694, 835, 1148, 1594
BsuRI GGCC 8 cut(s) 740, 1396, 1540, 1674, 1797, 1945, 2229, 2238
BtgI CCRYGG 1 cut(s) 499
BtsCI GGATG 7 cut(s) 260, 418, 495, 773, 1376, 1736, 1966
BtsIMutI CAGTG 3 cut(s) 45, 1081, 2053
Cac8I GCNNGC 3 cut(s) 372, 1473, 1815
CaiI CAGNNNCTG 1 cut(s) 81
Cfr13I GGNCC 8 cut(s) 431, 1117, 1361, 1526, 1538, 1943, 2228, 2237
Csp6I GTAC 7 cut(s) 177, 530, 766, 1452, 1501, 2107, 2248
CspCI CAANNNNNGTGG 2 cut(s) 1021, 1056
CviAII CATG 6 cut(s) 165, 337, 500, 1467, 1691, 1750
CviQI GTAC 7 cut(s) 177, 530, 766, 1452, 1501, 2107, 2248
DpnI GATC 7 cut(s) 607, 696, 837, 1056, 1150, 1345, 1596
DpnII GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
DraI TTTAAA 1 cut(s) 2125
EaeI YGGCCR 4 cut(s) 738, 1394, 1672, 1795
Eam1104I CTCTTC 1 cut(s) 970
EarI CTCTTC 1 cut(s) 970
Eco130I CCWWGG 4 cut(s) 499, 1267, 1504, 1662
Eco47I GGWCC 4 cut(s) 431, 1117, 1361, 1526
Eco57I CTGAAG 1 cut(s) 290
Eco88I CYCGRG 1 cut(s) 1530
EcoNI CCTNNNNNAGG 1 cut(s) 1533
EcoO109I RGGNCCY 2 cut(s) 1538, 1943
EcoRI GAATTC 2 cut(s) 169, 2014
EcoRII CCWGG 3 cut(s) 525, 1391, 2214
EcoT14I CCWWGG 4 cut(s) 499, 1267, 1504, 1662
ErhI CCWWGG 4 cut(s) 499, 1267, 1504, 1662
FaeI CATG 6 cut(s) 168, 340, 503, 1470, 1694, 1753
FaqI GGGAC 3 cut(s) 646, 827, 1359
FatI CATG 6 cut(s) 164, 336, 499, 1466, 1690, 1749
FauI CCCGC 1 cut(s) 73
Fnu4HI GCNGC 5 cut(s) 211, 902, 1795, 1811, 1818
FokI GGATG 7 cut(s) 247, 425, 482, 760, 1383, 1723, 1973
Fsp4HI GCNGC 5 cut(s) 211, 902, 1795, 1811, 1818
FspBI CTAG 6 cut(s) 279, 789, 1193, 1238, 1586, 1611
GluI GCNGC 5 cut(s) 211, 902, 1795, 1811, 1818
GsuI CTGGAG 1 cut(s) 2040
HaeIII GGCC 8 cut(s) 740, 1396, 1540, 1674, 1797, 1945, 2229, 2238
HapII CCGG 4 cut(s) 247, 587, 630, 656
Hin1II CATG 6 cut(s) 168, 340, 503, 1470, 1694, 1753
HincII GTYRAC 1 cut(s) 550
HindII GTYRAC 1 cut(s) 550
HindIII AAGCTT 3 cut(s) 155, 368, 463
HpaII CCGG 4 cut(s) 247, 587, 630, 656
HphI GGTGA 2 cut(s) 1451, 1568
Hpy166II GTNNAC 2 cut(s) 73, 550
Hpy8I GTNNAC 2 cut(s) 73, 550
Hpy99I CGWCG 3 cut(s) 2072, 2245, 2273
HpyAV CCTTC 8 cut(s) 895, 1166, 1412, 1484, 1927, 2172, 2210, 2295
HpyCH4III ACNGT 2 cut(s) 49, 543
HpyCH4IV ACGT 1 cut(s) 401
HpyF10VI GCNNNNNNNGC 1 cut(s) 2235
HpySE526I ACGT 1 cut(s) 401
Hsp92II CATG 6 cut(s) 168, 340, 503, 1470, 1694, 1753
KpnI GGTACC 1 cut(s) 533
Kzo9I GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
LmnI GCTCC 5 cut(s) 114, 503, 719, 906, 1499
Lsp1109I GCAGC 4 cut(s) 222, 888, 1804, 1822
LweI GCATC 2 cut(s) 1279, 1951
MaeI CTAG 6 cut(s) 279, 789, 1193, 1238, 1586, 1611
MaeII ACGT 1 cut(s) 401
MaeIII GTNAC 6 cut(s) 49, 202, 491, 1745, 1925, 2073
MalI GATC 7 cut(s) 607, 696, 837, 1056, 1150, 1345, 1596
MbiI CCGCTC 1 cut(s) 1794
MboI GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
MboII GAAGA 5 cut(s) 16, 296, 957, 1321, 1884
MfeI CAATTG 3 cut(s) 752, 1243, 1676
MflI RGATCY 5 cut(s) 605, 694, 835, 1148, 1594
MhlI GDGCHC 1 cut(s) 1889
MlsI TGGCCA 1 cut(s) 740
MluNI TGGCCA 1 cut(s) 740
MlyI GAGTC 5 cut(s) 487, 653, 657, 1093, 1772
MmeI TCCRAC 7 cut(s) 211, 316, 801, 873, 1371, 2009, 2133
Mox20I TGGCCA 1 cut(s) 740
MscI TGGCCA 1 cut(s) 740
MseI TTAA 9 cut(s) 404, 675, 798, 1425, 1485, 1607, 1647, 1991, 2124
Msp20I TGGCCA 1 cut(s) 740
MspI CCGG 4 cut(s) 247, 587, 630, 656
MspR9I CCNGG 5 cut(s) 248, 527, 631, 1393, 2216
MunI CAATTG 3 cut(s) 752, 1243, 1676
Mva1269I GAATGC 1 cut(s) 710
MvaI CCWGG 3 cut(s) 527, 1393, 2216
MwoI GCNNNNNNNGC 1 cut(s) 2235
NciI CCSGG 2 cut(s) 248, 631
NcoI CCATGG 1 cut(s) 499
NdeII GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
NlaIII CATG 6 cut(s) 168, 340, 503, 1470, 1694, 1753
NlaIV GGNNCC 6 cut(s) 531, 580, 1363, 1390, 1495, 1944
NmuCI GTSAC 1 cut(s) 2073
NspI RCATGY 1 cut(s) 1694
PaeR7I CTCGAG 1 cut(s) 1530
PciI ACATGT 1 cut(s) 1690
PcsI WCGNNNNNNNCGW 3 cut(s) 846, 1982, 2277
PctI GAATGC 1 cut(s) 710
PfeI GAWTC 6 cut(s) 137, 389, 614, 1080, 1272, 1875
PflMI CCANNNNNTGG 1 cut(s) 602
PfoI TCCNGGA 1 cut(s) 629
PkrI GCNGC 5 cut(s) 212, 903, 1796, 1812, 1819
PleI GAGTC 5 cut(s) 486, 653, 656, 1093, 1771
PpsI GAGTC 5 cut(s) 486, 653, 656, 1093, 1771
PscI ACATGT 1 cut(s) 1690
PshBI ATTAAT 1 cut(s) 798
Psp6I CCWGG 3 cut(s) 525, 1391, 2214
PspGI CCWGG 3 cut(s) 525, 1391, 2214
PspN4I GGNNCC 6 cut(s) 531, 580, 1363, 1390, 1495, 1944
PspPI GGNCC 8 cut(s) 431, 1117, 1361, 1526, 1538, 1943, 2228, 2237
PspXI VCTCGAGB 1 cut(s) 1530
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 5 cut(s) 605, 694, 835, 1148, 1594
RsaI GTAC 7 cut(s) 178, 531, 767, 1453, 1502, 2108, 2249
RsaNI GTAC 7 cut(s) 177, 530, 766, 1452, 1501, 2107, 2248
SaqAI TTAA 9 cut(s) 404, 675, 798, 1425, 1485, 1607, 1647, 1991, 2124
SatI GCNGC 5 cut(s) 211, 902, 1795, 1811, 1818
Sau3AI GATC 7 cut(s) 605, 694, 835, 1054, 1148, 1343, 1594
Sau96I GGNCC 8 cut(s) 431, 1117, 1361, 1526, 1538, 1943, 2228, 2237
SchI GAGTC 5 cut(s) 487, 653, 657, 1093, 1772
ScrFI CCNGG 5 cut(s) 248, 527, 631, 1393, 2216
SduI GDGCHC 1 cut(s) 1889
SfaNI GCATC 2 cut(s) 1279, 1951
SfcI CTRYAG 2 cut(s) 539, 2110
SfiI GGCCNNNNNGGCC 1 cut(s) 2235
Sfr274I CTCGAG 1 cut(s) 1530
SinI GGWCC 4 cut(s) 431, 1117, 1361, 1526
SlaI CTCGAG 1 cut(s) 1530
SmlI CTYRAG 3 cut(s) 475, 1530, 2002
SmoI CTYRAG 3 cut(s) 475, 1530, 2002
SsiI CCGC 4 cut(s) 66, 904, 1794, 2212
SspI AATATT 1 cut(s) 408
SspMI CTAG 6 cut(s) 279, 789, 1193, 1238, 1586, 1611
StyD4I CCNGG 5 cut(s) 246, 525, 629, 1391, 2214
StyI CCWWGG 4 cut(s) 499, 1267, 1504, 1662
TaaI ACNGT 2 cut(s) 49, 543
TaiI ACGT 1 cut(s) 404
TaqI TCGA 9 cut(s) 173, 612, 840, 1531, 1622, 1898, 1920, 2280, 2288
TatI WGTACW 3 cut(s) 176, 765, 2247
TauI GCSGC 1 cut(s) 1797
TfiI GAWTC 6 cut(s) 137, 389, 614, 1080, 1272, 1875
Tru1I TTAA 9 cut(s) 404, 675, 798, 1425, 1485, 1607, 1647, 1991, 2124
Tru9I TTAA 9 cut(s) 404, 675, 798, 1425, 1485, 1607, 1647, 1991, 2124
TscAI CASTG 3 cut(s) 52, 1081, 2053
TseFI GTSAC 1 cut(s) 2073
TseI GCWGC 4 cut(s) 210, 901, 1810, 1817
Tsp45I GTSAC 1 cut(s) 2073
TspDTI ATGAA 4 cut(s) 325, 1503, 1766, 1827
TspGWI ACGGA 2 cut(s) 607, 1665
TspRI CASTG 3 cut(s) 52, 1081, 2053
Van91I CCANNNNNTGG 1 cut(s) 602
VpaK11BI GGWCC 4 cut(s) 431, 1117, 1361, 1526
VspI ATTAAT 1 cut(s) 798
XagI CCTNNNNNAGG 1 cut(s) 1533
XapI RAATTY 8 cut(s) 169, 376, 443, 950, 1014, 1352, 1800, 2014
XbaI TCTAGA 1 cut(s) 1585
XceI RCATGY 1 cut(s) 1694
XcmI CCANNNNNNNNNTGG 1 cut(s) 406
XhoI CTCGAG 1 cut(s) 1530
XspI CTAG 6 cut(s) 279, 789, 1193, 1238, 1586, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.