RchiOBHm_Chr1g0353341

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Reverse (-)
46585254 .. 46588813
3560 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57898

Sequence Viewer

Length: 3198 bp
ATGAAAACTTTGCTACATTTCTTCCTTTCCTTGATCACACTCTGGGTCAGTATCATCATCCCAGCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTCGCTGCTGATTTCGGTCCTTCCACCAAGATTGTTTCTTGGAATGCAAGTACTGATTGTTGTTCCTGGGTCGGCGTCACTTGCAGCCGTAATGGGCGTGTTCTGGGTCTTGACATAAGCAGCCAAGGTATCTCAGCTGGAATTGACAATGCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCGGACAACCAACTTGGCAATTACTCTCAATCAATTCCATCCGCCATAGGAGATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAATGATTATTCAGGGCAAATTCCCATCCAGATTTCTCGCTTGAGGAGGTTAGTAGTTCTTGATTTTTCTAACAATTATGGTGGGTTAAACCTTGGTAGTCCAAATTTACCCATGTTGGTTCACGACTTCACAGAGCTTAGAGAGTTATATCTTGATGGTGTCCTAATATCAGAACAGGGGATCAGTGAGTGGGGCCGAGCCATATCATCTTCCATTCCCAACCTCAGGGTCCTGAGCATGTTCAATTGTCATCTCTCAGGCCCTTTTCTCGAGTCTCTTGCCAAGCTTCAGTATCTATCTGTAATTAGTTTGCCATTGAACAATATCTCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCATACTTGACTGTCCTGAGTCTCCAGAGATGCTCATTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTGTCTACAAAGTATTGACCTTTCCTTGAATGACCAACTTGATGGTTCCTTGCCAGAATTCCCAAGGAATGCATCTCTTCAGTACCTGGATCTAACCGGGACAAATTTTTCAGGGTTATTACCAAATTCTATTGGCAACCTCAAAATGCTGTCCACCATACATATTCAAGGCTGCAATTTCACCGGACCGATCCCCAAGTCAATGACAAACCTTACACAATTGATTTATTTGTTGATGTCTTATAACAATTTGGAAGGTTCAATTCCGTCATTCAGTTGGGCCAAGAATGTTGTCAGCATAGACCTTTCCCACAATGGTCTAACAGGTACTATTAGTTCCACCCACTGGAGAAACCTTACTAAGCTATCTTATCTCAGTTTGGGATCCAATAAGCTCAATGGGAATATCCAAGCATCTCTGTTTTCTATTCCCCTATTGTCTAGTCTAGATCTTTCCAGCAACCAATTCTCTGGTCCATTCCCTGAAATTTCAAATGTGTCTTCCCACTTGCTGAATGGTCCTTATCTTGATCTTTATTTGAGTAGCAACAATCTCCAAGGGCCACTACCTATGTCTCTCTTTTGTTTGCTACGTCTCACCACTCTAGATCTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATCGTCTACACCAACTGAGAAATCTTTCTATGCTTGATCTTTCACACAATAACTTGTTTCTTACCCATGATTATACCAATTTCTCATATTCCTCATCTTCTCAACTCGGTGACTTGAGGTTGGTGTCATTGAAATTGAGAACATTTCCTAATTTCTTGAGAAATCAATCTTACTTGTACAGTTTGGACCTTTCAGATAACCAGATAAATGGCAAGATACCCATCTGGATTTGGAGTCTTAGTGATCTTAGTTACCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCCTTCAAACAATCTCGGTAACTTAAGGTACCTTGACCTCCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTCCAACACCTTTCAGTGCCTATTATCTAGATTTCTCAAGGAATTATTTCAGCTCTATCATATCGAGTACCATTGGAGATATGTTTCTTGAAGCTGGATTCTTGTCGCTTTCGAGCAATAACCTCAGTGGAATCATTCCAGAATCATTATGCAATTCAGAATCTCTTGAGGTTCTTGATCTGTCCAATAATTCTCTGAGTGGCACGATTCCCCAGTGTTTAGCTACAATGAAGACGCTTGCAGTACTCAATGTAAGGAGAAACAATCTTACATATGTTAATGAATTCTCTCAGAATTGCAGTTTAAAAACTCTGGACATCAGTGGAAATCAGATTCAAGGCCAGTTTCTAAAATCTCTTGTCAACTGCACCCAGTTAGAGGTTTTAAACCTCGGAAACAATCTGATAACTGAACCATTTCCATGCTTTTTGAGGAACACATCCACCTTGCGTATCCTTGTCTTGAGATCCAATAAATTCTATGGGCATATTGGATGTCACAAGACTGATGGCACTTGGCCAGTACTTCAAATCATAGACCTAGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAACTTTGACAACTTGGCAGGCGATGAGGACTAGCAAAGATAATACCCCATGGAAGATCGATTGCCTTTCCTGTGCCAATGAATATTATCATCAAGAAATCACGGTTACCGCCAGAGGTTTAGAGATGCACCTAGTGAATGTTTTAAATATCTTCACCTCCATTGACTTCTCGTGCAACAAGTTCAAAGGATCAATACCGAAGGAAATTGGAGAACTCAAATCATTATATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTAAGTAACTTGAGTGAGCTAGAGTCTTTGGACCTCTCGAAAAACAAACTGAACGGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCATATAATCAATTGGACGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCGAAGGCAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAATAACACAGGGTTCTCACCACCAAAGCAGGAAGGCAACCATTCAAATCCAGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGATTTACTTGTGGGTTTGGCATTGTCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTGGAACAAAGATTTGGTCATCACAGGAGACATGTTTATGTACATCAGAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1065

Amino Acids

118.79

Weight (kDa)

6.71

Isoelectric Point (pI)

37.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 72 7.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 72 - 292 5.6e-11 Leucine-rich repeat region
LRR_14 PF23598 306 - 513 2.5e-09 Leucine-rich repeat region
LRR_8 PF13855 378 - 438 1e-05 Leucine rich repeat
LRR_8 PF13855 555 - 613 4.4e-07 Leucine rich repeat
LRR_8 PF13855 654 - 709 2.8e-07 Leucine rich repeat
LRR_4 PF12799 720 - 756 3.7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 886 - 945 1.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1089
Acc65I GGTACC 1 cut(s) 1812
AccB1I GGYRCC 1 cut(s) 1812
AccB7I CCANNNNNTGG 1 cut(s) 1191
AccI GTMKAC 2 cut(s) 850, 1498
AciI CCGC 4 cut(s) 326, 366, 2544, 2853
AclWI GGATC 7 cut(s) 599, 942, 1030, 1224, 1237, 2319, 2632
AcoI YGGCCR 1 cut(s) 2375
AcsI RAATTY 9 cut(s) 400, 429, 514, 902, 949, 970, 1332, 2141, 2333
AcuI CTGAAG 2 cut(s) 683, 908
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 2569
AfiI CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2236, 3020, 3133
AflII CTTAAG 1 cut(s) 1807
AflIII ACRYGT 1 cut(s) 3163
AjnI CCWGG 5 cut(s) 194, 751, 930, 2428, 2980
AjuI GAANNNNNNNTTGG 4 cut(s) 2672, 2704, 3129, 3161
Alw21I GWGCWC 1 cut(s) 2860
Alw26I GTCTC 7 cut(s) 293, 690, 797, 1425, 1445, 3154, 3184
AlwI GGATC 7 cut(s) 599, 942, 1030, 1224, 1237, 2319, 2632
AlwNI CAGNNNCTG 1 cut(s) 931
Ama87I CYCGRG 1 cut(s) 680
AoxI GGCC 7 cut(s) 604, 670, 1125, 1406, 2197, 2375, 2912
ApeKI GCWGC 5 cut(s) 134, 213, 249, 1017, 2879
ApoI RAATTY 9 cut(s) 400, 429, 514, 902, 949, 970, 1332, 2141, 2333
ArsI GACNNNNNNTTYG 2 cut(s) 3133, 3165
Asp700I GAANNNNTTC 3 cut(s) 1516, 1904, 2274
Asp718I GGTACC 1 cut(s) 1812
AspLEI GCGC 1 cut(s) 745
AsuC2I CCSGG 1 cut(s) 943
AsuHPI GGTGA 6 cut(s) 1018, 1435, 1613, 2432, 2581, 2940
AsuII TTCGAA 1 cut(s) 2889
AvaI CYCGRG 1 cut(s) 680
AvaII GGWCC 7 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2743
AxyI CCTNAGG 1 cut(s) 635
BalI TGGCCA 1 cut(s) 2377
BamHI GGATCC 1 cut(s) 1229
BanI GGYRCC 1 cut(s) 1812
BauI CACGAG 2 cut(s) 125, 2605
BbsI GAAGAC 2 cut(s) 1338, 2096
Bbv12I GWGCWC 1 cut(s) 2860
BbvCI CCTCAGC 1 cut(s) 3129
BbvI GCAGC 5 cut(s) 121, 225, 261, 1004, 2891
BccI CCATC 9 cut(s) 303, 370, 443, 560, 881, 1721, 2360, 2713, 3069
BceAI ACGGC 1 cut(s) 201
BcgI CGANNNNNNTGC 4 cut(s) 671, 705, 3031, 3065
BciT130I CCWGG 5 cut(s) 196, 753, 932, 2430, 2982
BciVI GTATCC 2 cut(s) 2321, 2838
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 1 cut(s) 943
BcoDI GTCTC 7 cut(s) 293, 690, 797, 1425, 1445, 3154, 3184
BfrI CTTAAG 1 cut(s) 1807
BfuI GTATCC 2 cut(s) 2321, 2838
BglII AGATCT 4 cut(s) 376, 831, 1294, 1453
BisI GCNGC 5 cut(s) 135, 214, 250, 1018, 2880
BlsI GCNGC 5 cut(s) 136, 215, 251, 1019, 2881
BmcAI AGTACT 3 cut(s) 181, 2103, 2382
Bme1390I CCNGG 6 cut(s) 196, 753, 932, 943, 2430, 2982
Bme18I GGWCC 7 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2743
BmeT110I CYCGRG 1 cut(s) 680
BmiI GGNNCC 6 cut(s) 605, 641, 892, 1231, 1814, 2913
BmrFI CCNGG 6 cut(s) 196, 753, 932, 943, 2430, 2982
BmrI ACTGGG 2 cut(s) 2065, 2224
BmsI GCATC 5 cut(s) 791, 926, 1268, 2550, 2866
BmuI ACTGGG 2 cut(s) 2065, 2224
BpiI GAAGAC 2 cut(s) 1338, 2096
BpmI CTGGAG 2 cut(s) 779, 1213
Bpu10I CCTNAGC 2 cut(s) 644, 3129
Bpu14I TTCGAA 1 cut(s) 2889
BpuEI CTTGAG 8 cut(s) 409, 472, 1627, 1669, 1879, 2045, 2341, 2743
BpuMI CCSGG 1 cut(s) 943
Bsa29I ATCGAT 1 cut(s) 2493
BsaBI GATNNNNATC 1 cut(s) 1712
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 7 cut(s) 195, 253, 502, 908, 1402, 2248, 2483
BsaWI WCCGGW 2 cut(s) 1028, 2779
BsaXI ACNNNNNCTCC 2 cut(s) 1717, 1747
Bsc4I CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2236, 3020, 3133
Bse1I ACTGG 9 cut(s) 76, 746, 1196, 1834, 2071, 2200, 2230, 2378, 3191
Bse21I CCTNAGG 1 cut(s) 635
Bse3DI GCAATG 2 cut(s) 101, 806
Bse8I GATNNNNATC 1 cut(s) 1712
BseBI CCWGG 5 cut(s) 196, 753, 932, 2430, 2982
BseCI ATCGAT 1 cut(s) 2493
BseDI CCNNGG 7 cut(s) 195, 253, 502, 908, 1402, 2248, 2483
BseGI GGATG 5 cut(s) 57, 362, 435, 2297, 2357
BseJI GATNNNNATC 1 cut(s) 1712
BseLI CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2236, 3020, 3133
BseMI GCAATG 2 cut(s) 101, 806
BseNI ACTGG 9 cut(s) 76, 746, 1196, 1834, 2071, 2200, 2230, 2378, 3191
BseRI GAGGAG 1 cut(s) 469
BseXI GCAGC 5 cut(s) 121, 225, 261, 1004, 2891
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 2 cut(s) 2209, 2718
BshFI GGCC 7 cut(s) 606, 672, 1127, 1408, 2199, 2377, 2914
BshNI GGYRCC 1 cut(s) 1812
BshVI ATCGAT 1 cut(s) 2493
BsiHKAI GWGCWC 1 cut(s) 2860
BsiHKCI CYCGRG 1 cut(s) 680
BsiSI CCGG 3 cut(s) 942, 1029, 2780
BslFI GGGAC 1 cut(s) 958
BslI CCNNNNNNNGG 7 cut(s) 322, 636, 752, 1191, 2236, 3020, 3133
BsmAI GTCTC 7 cut(s) 293, 690, 797, 1425, 1445, 3154, 3184
BsmBI CGTCTC 2 cut(s) 1445, 3184
BsmFI GGGAC 1 cut(s) 958
BsmI GAATGC 3 cut(s) 178, 919, 2807
BsnI GGCC 7 cut(s) 606, 672, 1127, 1408, 2199, 2377, 2914
BsoBI CYCGRG 1 cut(s) 680
Bsp119I TTCGAA 1 cut(s) 2889
Bsp1286I GDGCHC 1 cut(s) 2860
Bsp1407I TGTACA 2 cut(s) 1668, 3172
Bsp19I CCATGG 1 cut(s) 2483
BspACI CCGC 4 cut(s) 326, 366, 2544, 2853
BspANI GGCC 7 cut(s) 606, 672, 1127, 1408, 2199, 2377, 2914
BspDI ATCGAT 1 cut(s) 2493
BspLI GGNNCC 6 cut(s) 605, 641, 892, 1231, 1814, 2913
BspPI GGATC 7 cut(s) 599, 942, 1030, 1224, 1237, 2319, 2632
BspT104I TTCGAA 1 cut(s) 2889
BspT107I GGYRCC 1 cut(s) 1812
BspTI CTTAAG 1 cut(s) 1807
BsrDI GCAATG 2 cut(s) 101, 806
BsrGI TGTACA 2 cut(s) 1668, 3172
BsrI ACTGG 9 cut(s) 76, 746, 1196, 1834, 2071, 2200, 2230, 2378, 3191
BssECI CCNNGG 7 cut(s) 195, 253, 502, 908, 1402, 2248, 2483
BssNI GRCGYC 1 cut(s) 204
BssSI CACGAG 2 cut(s) 125, 2605
BssT1I CCWWGG 5 cut(s) 253, 502, 908, 1402, 2483
Bst2BI CACGAG 2 cut(s) 125, 2605
Bst2UI CCWGG 5 cut(s) 196, 753, 932, 2430, 2982
Bst4CI ACNGT 4 cut(s) 784, 1673, 2539, 2768
Bst6I CTCTTC 2 cut(s) 296, 927
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 1807
BstAUI TGTACA 2 cut(s) 1668, 3172
BstBI TTCGAA 1 cut(s) 2889
BstC8I GCNNGC 3 cut(s) 283, 2097, 2454
BstDSI CCRYGG 1 cut(s) 2483
BstEII GGTNACC 1 cut(s) 2539
BstF5I GGATG 5 cut(s) 57, 362, 435, 2297, 2357
BstHHI GCGC 1 cut(s) 745
BstMAI GTCTC 7 cut(s) 293, 690, 797, 1425, 1445, 3154, 3184
BstMWI GCNNNNNNNGC 1 cut(s) 210
BstNI CCWGG 5 cut(s) 196, 753, 932, 2430, 2982
BstNSI RCATGY 3 cut(s) 652, 3112, 3167
BstPI GGTNACC 1 cut(s) 2539
BstSCI CCNGG 6 cut(s) 194, 751, 930, 941, 2428, 2980
BstV1I GCAGC 5 cut(s) 121, 225, 261, 1004, 2891
BstV2I GAAGAC 2 cut(s) 1338, 2096
BstX2I RGATCY 7 cut(s) 376, 831, 934, 1229, 1294, 1453, 2324
BstXI CCANNNNNNTGG 4 cut(s) 887, 1316, 1700, 1841
BstYI RGATCY 7 cut(s) 376, 831, 934, 1229, 1294, 1453, 2324
Bsu15I ATCGAT 1 cut(s) 2493
Bsu36I CCTNAGG 1 cut(s) 635
BsuI GTATCC 2 cut(s) 2321, 2838
BsuRI GGCC 7 cut(s) 606, 672, 1127, 1408, 2199, 2377, 2914
BsuTUI ATCGAT 1 cut(s) 2493
BtgI CCRYGG 1 cut(s) 2483
BtgZI GCGATG 1 cut(s) 2471
BtsCI GGATG 5 cut(s) 57, 362, 435, 2297, 2357
BtsIMutI CAGTG 7 cut(s) 83, 601, 1189, 1879, 1990, 2078, 2185
Cac8I GCNNGC 3 cut(s) 283, 2097, 2454
CaiI CAGNNNCTG 1 cut(s) 931
CfoI GCGC 1 cut(s) 745
ClaI ATCGAT 1 cut(s) 2493
CpoI CGGWCCG 1 cut(s) 1031
CseI GACGC 2 cut(s) 193, 2101
CspCI CAANNNNNGTGG 6 cut(s) 142, 177, 472, 507, 2398, 2433
CspI CGGWCCG 1 cut(s) 1031
DraI TTTAAA 3 cut(s) 2163, 2244, 2580
DraIII CACNNNGTG 1 cut(s) 2569
EaeI YGGCCR 1 cut(s) 2375
Eam1104I CTCTTC 2 cut(s) 296, 927
EarI CTCTTC 2 cut(s) 296, 927
EciI GGCGGA 2 cut(s) 341, 355
Eco130I CCWWGG 5 cut(s) 253, 502, 908, 1402, 2483
Eco47I GGWCC 7 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2743
Eco57I CTGAAG 2 cut(s) 683, 908
Eco81I CCTNAGG 1 cut(s) 635
Eco88I CYCGRG 1 cut(s) 680
Eco91I GGTNACC 1 cut(s) 2539
EcoO109I RGGNCCY 3 cut(s) 640, 671, 2912
EcoO65I GGTNACC 1 cut(s) 2539
EcoRI GAATTC 2 cut(s) 902, 2141
EcoRII CCWGG 5 cut(s) 194, 751, 930, 2428, 2980
EcoT14I CCWWGG 5 cut(s) 253, 502, 908, 1402, 2483
EcoT22I ATGCAT 1 cut(s) 919
ErhI CCWWGG 5 cut(s) 253, 502, 908, 1402, 2483
Esp3I CGTCTC 2 cut(s) 1445, 3184
FaqI GGGAC 1 cut(s) 958
FauNDI CATATG 1 cut(s) 2131
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 2 cut(s) 850, 1498
Fnu4HI GCNGC 5 cut(s) 135, 214, 250, 1018, 2880
FokI GGATG 5 cut(s) 44, 349, 422, 2284, 2364
Fsp4HI GCNGC 5 cut(s) 135, 214, 250, 1018, 2880
GlaI GCGC 1 cut(s) 744
GluI GCNGC 5 cut(s) 135, 214, 250, 1018, 2880
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 2 cut(s) 779, 1213
HaeIII GGCC 7 cut(s) 606, 672, 1127, 1408, 2199, 2377, 2914
HapII CCGG 3 cut(s) 942, 1029, 2780
HgaI GACGC 2 cut(s) 193, 2101
HhaI GCGC 1 cut(s) 745
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 1 cut(s) 743
HinP1I GCGC 1 cut(s) 743
HincII GTYRAC 1 cut(s) 2221
HindII GTYRAC 1 cut(s) 2221
HindIII AAGCTT 1 cut(s) 695
HpaII CCGG 3 cut(s) 942, 1029, 2780
HphI GGTGA 6 cut(s) 1018, 1435, 1613, 2432, 2581, 2940
Hpy166II GTNNAC 6 cut(s) 70, 532, 851, 999, 1499, 2221
Hpy8I GTNNAC 6 cut(s) 70, 532, 851, 999, 1499, 2221
HpyAV CCTTC 7 cut(s) 159, 1094, 1797, 2629, 2885, 2896, 2957
HpyCH4III ACNGT 4 cut(s) 784, 1673, 2539, 2768
HpyCH4IV ACGT 2 cut(s) 1438, 3193
HpyF10VI GCNNNNNNNGC 1 cut(s) 210
HpySE526I ACGT 2 cut(s) 1438, 3193
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 1 cut(s) 743
KpnI GGTACC 1 cut(s) 1816
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 2 cut(s) 111, 2782
Lsp1109I GCAGC 5 cut(s) 121, 225, 261, 1004, 2891
LweI GCATC 5 cut(s) 791, 926, 1268, 2550, 2866
MaeII ACGT 2 cut(s) 1438, 3193
MaeIII GTNAC 9 cut(s) 205, 840, 1601, 1742, 1802, 2354, 2539, 2717, 3054
MfeI CAATTG 3 cut(s) 655, 1064, 2831
MflI RGATCY 7 cut(s) 376, 831, 934, 1229, 1294, 1453, 2324
MhlI GDGCHC 1 cut(s) 2860
MlsI TGGCCA 1 cut(s) 2377
MluNI TGGCCA 1 cut(s) 2377
MlyI GAGTC 4 cut(s) 692, 799, 1735, 2744
MmeI TCCRAC 3 cut(s) 1854, 1886, 2703
Mox20I TGGCCA 1 cut(s) 2377
Mph1103I ATGCAT 1 cut(s) 919
MroXI GAANNNNTTC 3 cut(s) 1516, 1904, 2274
MscI TGGCCA 1 cut(s) 2377
MslI CAYNNNNRTG 2 cut(s) 2278, 3168
Msp20I TGGCCA 1 cut(s) 2377
MspA1I CMGCKG 2 cut(s) 266, 3133
MspCI CTTAAG 1 cut(s) 1807
MspI CCGG 3 cut(s) 942, 1029, 2780
MspR9I CCNGG 6 cut(s) 196, 753, 932, 943, 2430, 2982
MunI CAATTG 3 cut(s) 655, 1064, 2831
Mva1269I GAATGC 3 cut(s) 178, 919, 2807
MvaI CCWGG 5 cut(s) 196, 753, 932, 2430, 2982
MwoI GCNNNNNNNGC 1 cut(s) 210
NciI CCSGG 1 cut(s) 943
NcoI CCATGG 1 cut(s) 2483
NdeI CATATG 1 cut(s) 2131
NlaIV GGNNCC 6 cut(s) 605, 641, 892, 1231, 1814, 2913
NmeAIII GCCGAG 1 cut(s) 632
NmuCI GTSAC 4 cut(s) 205, 1601, 2354, 3054
NsiI ATGCAT 1 cut(s) 919
NspI RCATGY 3 cut(s) 652, 3112, 3167
NspV TTCGAA 1 cut(s) 2889
PaeR7I CTCGAG 1 cut(s) 680
PciI ACATGT 1 cut(s) 3163
PctI GAATGC 3 cut(s) 178, 919, 2807
PdmI GAANNNNTTC 3 cut(s) 1516, 1904, 2274
PfeI GAWTC 9 cut(s) 756, 1772, 1956, 1989, 2000, 2018, 2065, 2191, 2815
PflMI CCANNNNNTGG 1 cut(s) 1191
PfoI TCCNGGA 2 cut(s) 751, 2980
PkrI GCNGC 5 cut(s) 136, 215, 251, 1019, 2881
PleI GAGTC 4 cut(s) 691, 798, 1734, 2743
PpsI GAGTC 4 cut(s) 691, 798, 1734, 2743
PpuMI RGGWCCY 1 cut(s) 640
PscI ACATGT 1 cut(s) 3163
PsiI TTATAA 1 cut(s) 1089
Psp5II RGGWCCY 1 cut(s) 640
Psp6I CCWGG 5 cut(s) 194, 751, 930, 2428, 2980
PspEI GGTNACC 1 cut(s) 2539
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 5 cut(s) 194, 751, 930, 2428, 2980
PspN4I GGNNCC 6 cut(s) 605, 641, 892, 1231, 1814, 2913
PspPPI RGGWCCY 1 cut(s) 640
PsrI GAACNNNNNNTAC 2 cut(s) 1165, 1197
PstNI CAGNNNCTG 1 cut(s) 931
PsuI RGATCY 7 cut(s) 376, 831, 934, 1229, 1294, 1453, 2324
PvuII CAGCTG 2 cut(s) 266, 3133
RseI CAYNNNNRTG 2 cut(s) 2278, 3168
Rsr2I CGGWCCG 1 cut(s) 1031
RsrII CGGWCCG 1 cut(s) 1031
SatI GCNGC 5 cut(s) 135, 214, 250, 1018, 2880
ScaI AGTACT 3 cut(s) 181, 2103, 2382
SchI GAGTC 4 cut(s) 692, 799, 1735, 2744
ScrFI CCNGG 6 cut(s) 196, 753, 932, 943, 2430, 2982
SduI GDGCHC 1 cut(s) 2860
SfaNI GCATC 5 cut(s) 791, 926, 1268, 2550, 2866
Sfr274I CTCGAG 1 cut(s) 680
SfuI TTCGAA 1 cut(s) 2889
SinI GGWCC 7 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2743
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 2 cut(s) 2278, 3168
SsiI CCGC 4 cut(s) 326, 366, 2544, 2853
SspI AATATT 1 cut(s) 2519
StyD4I CCNGG 6 cut(s) 194, 751, 930, 941, 2428, 2980
StyI CCWWGG 5 cut(s) 253, 502, 908, 1402, 2483
TaaI ACNGT 4 cut(s) 784, 1673, 2539, 2768
TaiI ACGT 2 cut(s) 1441, 3196
TaqI TCGA 6 cut(s) 681, 1922, 1970, 2493, 2750, 2889
TaqII GACCGA 2 cut(s) 134, 1048
TatI WGTACW 5 cut(s) 179, 1668, 2101, 2380, 3172
TfiI GAWTC 9 cut(s) 756, 1772, 1956, 1989, 2000, 2018, 2065, 2191, 2815
TscAI CASTG 7 cut(s) 83, 601, 1196, 1879, 1990, 2078, 2185
TseFI GTSAC 4 cut(s) 205, 1601, 2354, 3054
TseI GCWGC 5 cut(s) 134, 213, 249, 1017, 2879
Tsp45I GTSAC 4 cut(s) 205, 1601, 2354, 3054
TspDTI ATGAA 7 cut(s) 17, 290, 762, 1829, 2102, 2154, 2529
TspGWI ACGGA 1 cut(s) 1101
TspRI CASTG 7 cut(s) 83, 601, 1196, 1879, 1990, 2078, 2185
Van91I CCANNNNNTGG 1 cut(s) 1191
Vha464I CTTAAG 1 cut(s) 1807
VpaK11BI GGWCC 7 cut(s) 146, 640, 1031, 1319, 1364, 1678, 2743
XapI RAATTY 9 cut(s) 400, 429, 514, 902, 949, 970, 1332, 2141, 2333
XbaI TCTAGA 4 cut(s) 1291, 1450, 1777, 1885
XceI RCATGY 3 cut(s) 652, 3112, 3167
XcmI CCANNNNNNNNNTGG 1 cut(s) 1358
XhoI CTCGAG 1 cut(s) 680
XmiI GTMKAC 2 cut(s) 850, 1498
XmnI GAANNNNTTC 3 cut(s) 1516, 1904, 2274
ZrmI AGTACT 3 cut(s) 181, 2103, 2382
Zsp2I ATGCAT 1 cut(s) 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.