RchiOBHm_Chr1g0353121

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Reverse (-)
46458794 .. 46461928
3135 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57877

Sequence Viewer

Length: 3135 bp
ATGAAAACTTTGCTACATTTCTTCCTTCTCTTGATCACACTTTGGGTCAGTATCATCATTCCAGCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTCTATGATGATATTTTCATCCGTCCACGTACCAGGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTGGGCATCACTTGCAGCCGTAATGGGCGTGTTCGGGGTCTTGATATAAGCAGCGAACAGATCTCAGCTGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCCGACAACCGACTTGGCAGTAACTCTCAATCAATTCCATCCGCAATCGGAAATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAATGATTATTCAGGGCAAATTCCCATGGAAATTTCACGATTGACGAGGTTGGCAGTTGTTGATTTTTCTAAGAATGGAGCATTCCACATAAAACTTGGAAGTCCAAATTTACACACGTTTGTTCAAAACCTCACAGAGCTTAGAGAGTTGTATCTTGATTGGGTCCAAATATCAGAACAGGGGAGGGAGTGGTGCCGAGCCATATCAGATTCCCTTCCTAACCTCAGGGTCTTGAGCATGTCCGCGTGTGATCTCTCAGGCCCTGTTCTCCAGTCCCTTGCTAAGCTTCGGTCTCTATCCGTGATTAGGTTGGACGGGAACCATATCTCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCTTGAGTCTCGGAGACTGCGGGTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGGCCTTTTAGGTAATTACCAACTTGATGGTTCCTTGCCAGAATTCTCAAGGAACGGATCTCTTCAGCACTTGGATCTAGGCTGGACAAATTTTTCAGGGTTATTGCCAAATTCTATTGGCAATCTCAAGATGCTGTCCACCATAGATATTGATTATTGCAATTTCACCGGACCGATCCCCAAGTCAATGACAAACCTTACACAATTGGTTTCTTTGTCGATGCCTGATAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATGTTCACACCATAGAACTTTCCAACAATCGTCTAACAGGTACTATTAATTCCACCCACTGGAGAAACCTTACTAAGCTATCCTCTCTCTGTTTGAATTCCAATAAGCTCGATGGAAATATCCCAGCATCTCTGTTTTCTCTTCCCAGAATTGATCTTTCCAACAATCAATTCTCTGGTCCATTCCCTGAAATTTCTAATGTGTCCTCCTCCTTGCTGAATGCTCCTGGTCTTGCAATTTATTTGGGTAGCAACAATCTCGAAGGGCCAATACCTATGTCTATCTTTAGCTTGCGAGGTCTTAGGGCTCTAGATCTTTCTTCAAATAATTTCAGTGGCTCGTTTCCTCTTGATGGTCTACACCAGCTGAGAAATCTTTCTGCACTTGATCTTTCACACAATAACTTGTTTCTTAGCCCTGATCATACCAATTTCTCATATTCCTCATTTTCTCAACTATCTACTTTGAGGTTGGTGTCATTGAAATTGATAACATTTCCTAATTTCTTGAGAAATCAATCTAACTTGAGAATATTGGACCTTTCGGATAACCAGATAAATGGCAAGGTACCCAACTGGATTTGGGGTTTTAGTGATCTTGAGAACCTAAATCTTTCTTGCAACTCCCTAGATTCCGTAGAAGTTCCTTCAATCAATCACAGTAATTTACTAAGTCTAGATTTCTCGAGGAATTATTTCAGCTCTTCCATACCGAGTACCATTGGAGATGTGCTTGGTAGCACTGTGTTCTTGTCGCTTTCGAGCAATAACCTCAGTGGGATCATACCAGAATCATTATGCAATTCAAGAAATCTTCGTATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACAGTTCCCCGGTGCTTGACTACAATGAGCACGCTTCTAGTACTCAATTTAAGGAGAAACAATCTTACAAATGTTAATGAATTCTCTCATAATTGCAGTTTAGAAATGCTGGACATCAGTGGAAATCAAATTCAAGGCCAGTTTTTAAGATCTCTTGTCAACTGCACCCAGTTAAAGGTTTTAAATCTTGGAAACAATCTTATAACAGAACCATTTCCATGCTTTTTGAGTAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTCTATGGGCGCATTGGATGTCGCAAGACTAATGGCACTTGGCCAGTACTTCAAATCATAGACTTAGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCCATGAGGAATACCAAAGATAATGGCCCATGGAAGATCAGTAACATTGGACTTAATTACGATGACGACCTTTATTATCAAGAAGATACAGTCAATGTTAGCAACAAAGGTTTAGAGATGGAGCTGGACAATATTTTAACAATCTTCACCTCCATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCGGAGGAAATTGGAGAACTCAAATCATTATATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTAAGTAACTTGAGTGAGCTAGAGTCTTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACTGGAGCTTACAAAACTCACTTTCCTTGAATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCGAAGGTAACAAAGGATTGTGGGGGCCTCCTTTAACAACATATAATAGAACAGGGTTCTCACCAAAGTTGGAAGCAAACCATTCAAATCCTGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGATTTACATGTGGGTTTGGGATTTCCATCGGGTCACTTTTGTTCTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTGGAAGAAAGATTTGGTCATCACTGGAGACATGTTTATGTACATCAGAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1044

Amino Acids

116.36

Weight (kDa)

7.29

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 74 6e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 90 - 194 9.5e-07 Leucine-rich repeat region
LRR_14 PF23598 309 - 419 3.2e-07 Leucine-rich repeat region
LRR_8 PF13855 459 - 515 2.9e-06 Leucine rich repeat
LRR_8 PF13855 649 - 707 9.4e-10 Leucine rich repeat
LRR_4 PF12799 696 - 732 7.3e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 866 - 925 8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2192
Acc65I GGTACC 1 cut(s) 1705
AccB1I GGYRCC 2 cut(s) 609, 1705
AccB7I CCANNNNNTGG 1 cut(s) 1197
AccBSI CCGCTC 1 cut(s) 2706
AccI GTMKAC 1 cut(s) 1495
AccII CGCG 1 cut(s) 662
AciI CCGC 5 cut(s) 372, 660, 810, 2706, 2793
AclWI GGATC 6 cut(s) 931, 948, 1036, 1925, 2247, 2572
AcoI YGGCCR 2 cut(s) 330, 2303
AcuI CTGAAG 1 cut(s) 914
AfaI GTAC 9 cut(s) 160, 187, 1180, 1707, 1855, 2031, 2310, 2355, 3111
AfiI CCNNNNNNNGG 8 cut(s) 328, 723, 758, 1197, 1490, 2164, 2957, 3070
AflIII ACRYGT 3 cut(s) 531, 2966, 3100
AjnI CCWGG 5 cut(s) 161, 757, 1363, 2356, 2917
AjuI GAANNNNNNNTTGG 6 cut(s) 1292, 1324, 2612, 2644, 3066, 3098
Alw21I GWGCWC 2 cut(s) 2021, 2800
Alw26I GTCTC 6 cut(s) 299, 714, 798, 803, 3091, 3121
AlwI GGATC 6 cut(s) 931, 948, 1036, 1925, 2247, 2572
AlwNI CAGNNNCTG 1 cut(s) 680
Ama87I CYCGRG 1 cut(s) 1822
ApeKI GCWGC 3 cut(s) 219, 255, 2819
AseI ATTAAT 1 cut(s) 1185
Asp700I GAANNNNTTC 3 cut(s) 1513, 1832, 2202
Asp718I GGTACC 1 cut(s) 1705
AspLEI GCGC 2 cut(s) 751, 2274
AsuC2I CCSGG 1 cut(s) 1999
AsuHPI GGTGA 4 cut(s) 1024, 2360, 2521, 2880
AsuII TTCGAA 1 cut(s) 2829
AvaI CYCGRG 1 cut(s) 1822
AvaII GGWCC 5 cut(s) 580, 1037, 1316, 1675, 2683
AxyI CCTNAGG 1 cut(s) 641
BalI TGGCCA 1 cut(s) 2305
BanI GGYRCC 2 cut(s) 609, 1705
BanII GRGCYC 1 cut(s) 1447
BarI GAAGNNNNNNTAC 2 cut(s) 1392, 1424
BauI CACGAG 1 cut(s) 125
Bbv12I GWGCWC 2 cut(s) 2021, 2800
BbvCI CCTCAGC 1 cut(s) 3066
BbvI GCAGC 3 cut(s) 231, 267, 2831
BccI CCATC 9 cut(s) 309, 376, 887, 1244, 1484, 2494, 2653, 2993, 3006
BceAI ACGGC 1 cut(s) 207
BcgI CGANNNNNNTGC 2 cut(s) 1378, 1412
BciT130I CCWGG 5 cut(s) 163, 759, 1365, 2358, 2919
BciVI GTATCC 1 cut(s) 2778
BclI TGATCA 2 cut(s) 33, 1558
BcnI CCSGG 1 cut(s) 1999
BcoDI GTCTC 6 cut(s) 299, 714, 798, 803, 3091, 3121
BfaI CTAG 6 cut(s) 944, 1448, 1766, 1814, 2027, 2672
BfuI GTATCC 1 cut(s) 2778
BglII AGATCT 4 cut(s) 264, 837, 1450, 2138
BisI GCNGC 3 cut(s) 220, 256, 2820
BlpI GCTNAGC 1 cut(s) 699
BlsI GCNGC 3 cut(s) 221, 257, 2821
BmcAI AGTACT 3 cut(s) 187, 2031, 2310
Bme1390I CCNGG 6 cut(s) 163, 759, 1365, 1999, 2358, 2919
Bme18I GGWCC 5 cut(s) 580, 1037, 1316, 1675, 2683
BmeT110I CYCGRG 1 cut(s) 1822
BmiI GGNNCC 7 cut(s) 581, 611, 737, 898, 1132, 1707, 2853
BmrFI CCNGG 6 cut(s) 163, 759, 1365, 1999, 2358, 2919
BmrI ACTGGG 1 cut(s) 2152
BmsI GCATC 5 cut(s) 219, 987, 1077, 1274, 2806
BmuI ACTGGG 1 cut(s) 2152
BpmI CTGGAG 4 cut(s) 671, 1219, 2741, 3115
Bpu10I CCTNAGC 1 cut(s) 3066
Bpu1102I GCTNAGC 1 cut(s) 699
Bpu14I TTCGAA 1 cut(s) 2829
BpuEI CTTGAG 9 cut(s) 415, 670, 814, 898, 977, 1666, 1684, 1757, 2683
BpuMI CCSGG 1 cut(s) 1999
BsaAI YACGTR 1 cut(s) 158
BsaBI GATNNNNATC 1 cut(s) 2984
BsaI GGTCTC 1 cut(s) 714
BsaJI CCNNGG 3 cut(s) 441, 1997, 2411
BsaWI WCCGGW 2 cut(s) 1034, 2572
Bsc4I CCNNNNNNNGG 8 cut(s) 328, 723, 758, 1197, 1490, 2164, 2957, 3070
Bse21I CCTNAGG 1 cut(s) 641
Bse3DI GCAATG 1 cut(s) 101
Bse8I GATNNNNATC 1 cut(s) 2984
BseBI CCWGG 5 cut(s) 163, 759, 1365, 2358, 2919
BseDI CCNNGG 3 cut(s) 441, 1997, 2411
BseGI GGATG 4 cut(s) 147, 368, 2225, 2285
BseJI GATNNNNATC 1 cut(s) 2984
BseLI CCNNNNNNNGG 8 cut(s) 328, 723, 758, 1197, 1490, 2164, 2957, 3070
BseMI GCAATG 1 cut(s) 101
BseMII CTCAG 7 cut(s) 282, 655, 687, 1496, 1924, 2693, 3080
BseRI GAGGAG 1 cut(s) 1336
BseXI GCAGC 3 cut(s) 231, 267, 2831
BseYI CCCAGC 1 cut(s) 1261
BsgI GTGCAG 3 cut(s) 1503, 2137, 2658
Bsh1236I CGCG 1 cut(s) 662
BshNI GGYRCC 2 cut(s) 609, 1705
BsiHKAI GWGCWC 2 cut(s) 2021, 2800
BsiHKCI CYCGRG 1 cut(s) 1822
BsiSI CCGG 3 cut(s) 1035, 1999, 2573
BslFI GGGAC 1 cut(s) 676
BslI CCNNNNNNNGG 8 cut(s) 328, 723, 758, 1197, 1490, 2164, 2957, 3070
BsmAI GTCTC 6 cut(s) 299, 714, 798, 803, 3091, 3121
BsmBI CGTCTC 1 cut(s) 3121
BsmFI GGGAC 1 cut(s) 676
BsmI GAATGC 3 cut(s) 184, 497, 1363
Bso31I GGTCTC 1 cut(s) 714
BsoBI CYCGRG 1 cut(s) 1822
Bsp119I TTCGAA 1 cut(s) 2829
Bsp1286I GDGCHC 3 cut(s) 1447, 2021, 2800
Bsp1407I TGTACA 1 cut(s) 3109
Bsp1720I GCTNAGC 1 cut(s) 699
Bsp19I CCATGG 2 cut(s) 441, 2411
BspACI CCGC 5 cut(s) 372, 660, 810, 2706, 2793
BspCNI CTCAG 7 cut(s) 281, 654, 686, 1497, 1923, 2694, 3079
BspFNI CGCG 1 cut(s) 662
BspLI GGNNCC 7 cut(s) 581, 611, 737, 898, 1132, 1707, 2853
BspPI GGATC 6 cut(s) 931, 948, 1036, 1925, 2247, 2572
BspQI GCTCTTC 1 cut(s) 1846
BspT104I TTCGAA 1 cut(s) 2829
BspT107I GGYRCC 2 cut(s) 609, 1705
BspTNI GGTCTC 1 cut(s) 714
BsrBI CCGCTC 1 cut(s) 2706
BsrDI GCAATG 1 cut(s) 101
BsrGI TGTACA 1 cut(s) 3109
BssECI CCNNGG 3 cut(s) 441, 1997, 2411
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 2 cut(s) 441, 2411
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 5 cut(s) 163, 759, 1365, 2358, 2919
Bst4CI ACNGT 5 cut(s) 790, 1799, 1882, 1993, 2473
Bst6I CTCTTC 4 cut(s) 302, 933, 1284, 1846
BstAPI GCANNNNNTGC 1 cut(s) 216
BstAUI TGTACA 1 cut(s) 3109
BstBAI YACGTR 1 cut(s) 158
BstBI TTCGAA 1 cut(s) 2829
BstC8I GCNNGC 3 cut(s) 1430, 2021, 2382
BstDSI CCRYGG 2 cut(s) 441, 2411
BstF5I GGATG 4 cut(s) 147, 368, 2225, 2285
BstFNI CGCG 1 cut(s) 662
BstHHI GCGC 2 cut(s) 751, 2274
BstMAI GTCTC 6 cut(s) 299, 714, 798, 803, 3091, 3121
BstMWI GCNNNNNNNGC 1 cut(s) 216
BstNI CCWGG 5 cut(s) 163, 759, 1365, 2358, 2919
BstNSI RCATGY 4 cut(s) 658, 2970, 3049, 3104
BstSCI CCNGG 6 cut(s) 161, 757, 1363, 1997, 2356, 2917
BstUI CGCG 1 cut(s) 662
BstV1I GCAGC 3 cut(s) 231, 267, 2831
BstX2I RGATCY 6 cut(s) 264, 837, 923, 940, 1450, 2138
BstXI CCANNNNNNTGG 2 cut(s) 893, 1697
BstYI RGATCY 6 cut(s) 264, 837, 923, 940, 1450, 2138
Bsu36I CCTNAGG 1 cut(s) 641
BsuI GTATCC 1 cut(s) 2778
BtgI CCRYGG 2 cut(s) 441, 2411
BtsCI GGATG 4 cut(s) 147, 368, 2225, 2285
BtsIMutI CAGTG 9 cut(s) 83, 1132, 1195, 1477, 1878, 1918, 2113, 2717, 3091
Cac8I GCNNGC 3 cut(s) 1430, 2021, 2382
CaiI CAGNNNCTG 1 cut(s) 680
CfoI GCGC 2 cut(s) 751, 2274
CpoI CGGWCCG 1 cut(s) 1037
Csp6I GTAC 9 cut(s) 159, 186, 1179, 1706, 1854, 2030, 2309, 2354, 3110
CspCI CAANNNNNGTGG 2 cut(s) 2326, 2361
CspI CGGWCCG 1 cut(s) 1037
CviQI GTAC 9 cut(s) 159, 186, 1179, 1706, 1854, 2030, 2309, 2354, 3110
DraI TTTAAA 1 cut(s) 2172
EaeI YGGCCR 2 cut(s) 330, 2303
Eam1104I CTCTTC 4 cut(s) 302, 933, 1284, 1846
EarI CTCTTC 4 cut(s) 302, 933, 1284, 1846
Eco130I CCWWGG 2 cut(s) 441, 2411
Eco24I GRGCYC 1 cut(s) 1447
Eco31I GGTCTC 1 cut(s) 714
Eco47I GGWCC 5 cut(s) 580, 1037, 1316, 1675, 2683
Eco57I CTGAAG 1 cut(s) 914
Eco81I CCTNAGG 1 cut(s) 641
Eco88I CYCGRG 1 cut(s) 1822
EcoO109I RGGNCCY 2 cut(s) 677, 2852
EcoRI GAATTC 4 cut(s) 908, 1234, 2069, 2747
EcoRII CCWGG 5 cut(s) 161, 757, 1363, 2356, 2917
EcoT14I CCWWGG 2 cut(s) 441, 2411
EcoT38I GRGCYC 1 cut(s) 1447
ErhI CCWWGG 2 cut(s) 441, 2411
Esp3I CGTCTC 1 cut(s) 3121
FaqI GGGAC 1 cut(s) 676
FauI CCCGC 1 cut(s) 803
FbaI TGATCA 2 cut(s) 33, 1558
FblI GTMKAC 1 cut(s) 1495
Fnu4HI GCNGC 3 cut(s) 220, 256, 2820
FokI GGATG 4 cut(s) 134, 355, 2212, 2292
FriOI GRGCYC 1 cut(s) 1447
Fsp4HI GCNGC 3 cut(s) 220, 256, 2820
FspBI CTAG 6 cut(s) 944, 1448, 1766, 1814, 2027, 2672
GlaI GCGC 2 cut(s) 750, 2273
GluI GCNGC 3 cut(s) 220, 256, 2820
GsaI CCCAGC 1 cut(s) 1265
GsuI CTGGAG 4 cut(s) 671, 1219, 2741, 3115
HapII CCGG 3 cut(s) 1035, 1999, 2573
HhaI GCGC 2 cut(s) 751, 2274
Hin6I GCGC 2 cut(s) 749, 2272
HinP1I GCGC 2 cut(s) 749, 2272
HincII GTYRAC 1 cut(s) 2149
HindII GTYRAC 1 cut(s) 2149
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 7 cut(s) 626, 762, 796, 1769, 1928, 2675, 2755
HpaII CCGG 3 cut(s) 1035, 1999, 2573
HphI GGTGA 4 cut(s) 1024, 2360, 2521, 2880
Hpy166II GTNNAC 6 cut(s) 70, 155, 1005, 1144, 1496, 2149
Hpy188I TCNGA 7 cut(s) 380, 405, 592, 625, 803, 1684, 3117
Hpy8I GTNNAC 6 cut(s) 70, 155, 1005, 1144, 1496, 2149
HpyAV CCTTC 8 cut(s) 35, 641, 861, 1100, 1394, 1794, 2825, 2836
HpyCH4III ACNGT 5 cut(s) 790, 1799, 1882, 1993, 2473
HpyCH4IV ACGT 3 cut(s) 157, 533, 3130
HpyF10VI GCNNNNNNNGC 1 cut(s) 216
HpySE526I ACGT 3 cut(s) 157, 533, 3130
HspAI GCGC 2 cut(s) 749, 2272
KpnI GGTACC 1 cut(s) 1709
Ksp22I TGATCA 2 cut(s) 33, 1558
LguI GCTCTTC 1 cut(s) 1846
LmnI GCTCC 5 cut(s) 111, 494, 1366, 2503, 2722
Lsp1109I GCAGC 3 cut(s) 231, 267, 2831
LweI GCATC 5 cut(s) 219, 987, 1077, 1274, 2806
MaeI CTAG 6 cut(s) 944, 1448, 1766, 1814, 2027, 2672
MaeII ACGT 3 cut(s) 157, 533, 3130
MaeIII GTNAC 7 cut(s) 350, 846, 2219, 2423, 2657, 2834, 2991
MbiI CCGCTC 1 cut(s) 2706
MfeI CAATTG 2 cut(s) 1070, 2771
MflI RGATCY 6 cut(s) 264, 837, 923, 940, 1450, 2138
MhlI GDGCHC 3 cut(s) 1447, 2021, 2800
MlsI TGGCCA 1 cut(s) 2305
MluNI TGGCCA 1 cut(s) 2305
MlyI GAGTC 2 cut(s) 805, 2684
MmeI TCCRAC 6 cut(s) 708, 1083, 1185, 1323, 2643, 2877
Mox20I TGGCCA 1 cut(s) 2305
MroXI GAANNNNTTC 3 cut(s) 1513, 1832, 2202
MscI TGGCCA 1 cut(s) 2305
MslI CAYNNNNRTG 2 cut(s) 2206, 3105
Msp20I TGGCCA 1 cut(s) 2305
MspA1I CMGCKG 3 cut(s) 272, 1504, 3070
MspI CCGG 3 cut(s) 1035, 1999, 2573
MspR9I CCNGG 6 cut(s) 163, 759, 1365, 1999, 2358, 2919
MunI CAATTG 2 cut(s) 1070, 2771
Mva1269I GAATGC 3 cut(s) 184, 497, 1363
MvaI CCWGG 5 cut(s) 163, 759, 1365, 2358, 2919
MvnI CGCG 1 cut(s) 662
MwoI GCNNNNNNNGC 1 cut(s) 216
NciI CCSGG 1 cut(s) 1999
NcoI CCATGG 2 cut(s) 441, 2411
NlaIV GGNNCC 7 cut(s) 581, 611, 737, 898, 1132, 1707, 2853
NmeAIII GCCGAG 1 cut(s) 638
NmuCI GTSAC 1 cut(s) 2991
NspI RCATGY 4 cut(s) 658, 2970, 3049, 3104
NspV TTCGAA 1 cut(s) 2829
PaeR7I CTCGAG 1 cut(s) 1822
PciI ACATGT 2 cut(s) 2966, 3100
PciSI GCTCTTC 1 cut(s) 1846
PctI GAATGC 3 cut(s) 184, 497, 1363
PdmI GAANNNNTTC 3 cut(s) 1513, 1832, 2202
PfeI GAWTC 5 cut(s) 626, 762, 1769, 1928, 2755
PflMI CCANNNNNTGG 1 cut(s) 1197
PfoI TCCNGGA 2 cut(s) 757, 2917
PkrI GCNGC 3 cut(s) 221, 257, 2821
PleI GAGTC 2 cut(s) 804, 2683
PpsI GAGTC 2 cut(s) 804, 2683
Ppu21I YACGTR 1 cut(s) 158
PscI ACATGT 2 cut(s) 2966, 3100
PshBI ATTAAT 1 cut(s) 1185
PsiI TTATAA 1 cut(s) 2192
Psp6I CCWGG 5 cut(s) 161, 757, 1363, 2356, 2917
PspFI CCCAGC 1 cut(s) 1261
PspGI CCWGG 5 cut(s) 161, 757, 1363, 2356, 2917
PspN4I GGNNCC 7 cut(s) 581, 611, 737, 898, 1132, 1707, 2853
PstNI CAGNNNCTG 1 cut(s) 680
PsuI RGATCY 6 cut(s) 264, 837, 923, 940, 1450, 2138
PvuII CAGCTG 3 cut(s) 272, 1504, 3070
RsaI GTAC 9 cut(s) 160, 187, 1180, 1707, 1855, 2031, 2310, 2355, 3111
RsaNI GTAC 9 cut(s) 159, 186, 1179, 1706, 1854, 2030, 2309, 2354, 3110
RseI CAYNNNNRTG 2 cut(s) 2206, 3105
Rsr2I CGGWCCG 1 cut(s) 1037
RsrII CGGWCCG 1 cut(s) 1037
SapI GCTCTTC 1 cut(s) 1846
SatI GCNGC 3 cut(s) 220, 256, 2820
ScaI AGTACT 3 cut(s) 187, 2031, 2310
SchI GAGTC 2 cut(s) 805, 2684
ScrFI CCNGG 6 cut(s) 163, 759, 1365, 1999, 2358, 2919
SduI GDGCHC 3 cut(s) 1447, 2021, 2800
SfaNI GCATC 5 cut(s) 219, 987, 1077, 1274, 2806
Sfr274I CTCGAG 1 cut(s) 1822
SfuI TTCGAA 1 cut(s) 2829
SinI GGWCC 5 cut(s) 580, 1037, 1316, 1675, 2683
SlaI CTCGAG 1 cut(s) 1822
SmiMI CAYNNNNRTG 2 cut(s) 2206, 3105
SsiI CCGC 5 cut(s) 372, 660, 810, 2706, 2793
SspI AATATT 2 cut(s) 1671, 2515
SspMI CTAG 6 cut(s) 944, 1448, 1766, 1814, 2027, 2672
StyD4I CCNGG 6 cut(s) 161, 757, 1363, 1997, 2356, 2917
StyI CCWWGG 2 cut(s) 441, 2411
TaaI ACNGT 5 cut(s) 790, 1799, 1882, 1993, 2473
TaiI ACGT 3 cut(s) 160, 536, 3133
TaqI TCGA 7 cut(s) 1085, 1248, 1398, 1823, 1898, 2690, 2829
TaqII GACCGA 2 cut(s) 696, 1054
TatI WGTACW 4 cut(s) 185, 2029, 2308, 3109
TfiI GAWTC 5 cut(s) 626, 762, 1769, 1928, 2755
TscAI CASTG 9 cut(s) 83, 1132, 1202, 1477, 1885, 1918, 2113, 2724, 3098
TseFI GTSAC 1 cut(s) 2991
TseI GCWGC 3 cut(s) 219, 255, 2819
Tsp45I GTSAC 1 cut(s) 2991
TspDTI ATGAA 4 cut(s) 17, 136, 296, 2082
TspGWI ACGGA 6 cut(s) 140, 706, 936, 1107, 1762, 2577
TspRI CASTG 9 cut(s) 83, 1132, 1202, 1477, 1885, 1918, 2113, 2724, 3098
Van91I CCANNNNNTGG 1 cut(s) 1197
VpaK11BI GGWCC 5 cut(s) 580, 1037, 1316, 1675, 2683
VspI ATTAAT 1 cut(s) 1185
XbaI TCTAGA 2 cut(s) 1447, 1813
XceI RCATGY 4 cut(s) 658, 2970, 3049, 3104
XcmI CCANNNNNNNNNTGG 2 cut(s) 509, 2915
XhoI CTCGAG 1 cut(s) 1822
XmiI GTMKAC 1 cut(s) 1495
XmnI GAANNNNTTC 3 cut(s) 1513, 1832, 2202
XspI CTAG 6 cut(s) 944, 1448, 1766, 1814, 2027, 2672
ZrmI AGTACT 3 cut(s) 187, 2031, 2310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.