RchiOBHm_Chr1g0353291

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Reverse (-)
46559720 .. 46563079
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57894

Sequence Viewer

Length: 3360 bp
ATGAAAACTTTGCTACATTTCTTCCTTCTCTTGATCACACTTTGGGTCAGTATCATCATTCCAGCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATCATTGCTCCAATTCAAGAGCAGCCTTGTGTTCCTTAATTCCGCCAAGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTCGGCGTCACTTGCAGCCGTAATGGGCGTGTTCTGGGTCTTGACATAAGCAGCCAAGGAATCGCAGCTGGAATTGACAATTCCAGCTGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCCGACAACCGACTTGGCAGTAACTCTCAATCAATTCCATCCGCAATCGGAAATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAATGATTATTCAGGGAAAATTCCCATTGAAATTTCACGATTGACGAGGTTGGTAGTTGTTGATTTTTCTTACAATACTGCCACCTTAAAACTTGGAAGTCCAAATTTACACACGTTTGTTCAGACAGAACTTAGAGAGTTATATCTTGATCGTGTCCAAATATCAGAACAGGGGAGGAAGTGGTGCCGAGCCATATCAGATTCCCTTCCTAACCTCAGGGTCCTGAGCATGTCCTCGTGTGATCTCTCAGGCCCTTTTCTCCAGTCCCTTGCTAAGCTTCGGTCTCTATCCGTGATTAGGTTGGACAGGACCAATATCTCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCTTGAGTCTCCCGGGATGCAACTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAGATAATGACCAACTCGATGGTTCCTTGCCAGAATTCCCGAGGAATGGATCTCTTCAGCACCTGCATCTAAGCTGGACAAAATTTTCAGGGTTATTACCAAATTCTATTGGCAATCTCAAAATGCTGTCCACCATATATATTCAAGGTTGCAATTTCACCGGACCGATGCCAAAGTCAATGACAAACCTTACACAGTTGGTTTCTATGTGGATGTCTGGTAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATGTGGTCGGCATAGACCTTTCCCACAATGGTCTAACAGGTACTATTAATTCCACCCACTGGAGAAACCTTGCTAAGCTATCCTCTCTCGATTTGAAATCCAATAAGCTCGATGGGAATATCCCATCATCTCTGTTTTCTCTTCCCCTTTTGGATGATCTAGATCTTTCCAGCAATCAATTCTCTGGTCCATTCCCTGAAATTTCTAATGTGTCTTCCTACTGGAGAAACCTTACTAAGCTATCTTATATCAGTTTGGGATCCAATAAGCTCGATGGGAATATCCCAGCATCTCTGTTTTCTCTTCCCCTGTTGTATCGTCTAGATCTTTCCAGCAATCAATTCTCTGGTCCATTCCCTGAAATTTCTAATGTGTCCTCCTTCTTGCTGAATGGTCCTGATCTTGAACTTGATTTGAGTAGCAACAATCTCGAAGGGCCACTGCCTATGTCTATCTTTAGCTTGCGACGTCTTACCGCTCTAGATGTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATGGTCTACACCAGCTGAGAAATATTTCTGTACTTGATCTTTCACACAATAACTTGTTTCTTAGCCATGATTTTACTAATTTCTCATATTCCTCATTTTCTCGGCTCTTTGAGTTGAGGTTGGTGTCAATGAAATTGAGAACATTTCCTAATTTCTTGAGAAATCAATCTAACTTGAGAAGTTTGGACCTTTCAGATAACCAGATAAATGGCAAGATACCCAACTGGATTTGGAGTCTTAGTGATCTTACGTACCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCCTTCAAACAATCTCAGTTACTTAGAGTACCTTGACCTCCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTCCCATCACTTTACCGTGTCTATTATCTAGATTTCTCGAGAAATTATTTCAGCTCTCCCATACCGAGTACCATTGGAGATATGCTTGTAAACACTGGATTCTTGTCGCTTTCAAGCAATAACCTCAATGCGATCATTCCGGAATCATTATGCAATTCACAATTTCTTCAGATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACGGTTCCCCGGTGCTTGACTACAATGAGCACGCTTGAAGTACTCAATTTAAGGAGAAACAATCTTACAAATGTTAATGAATTCTCCCATAATTGCAGTTTAGCAACGGTAGACATCAGTGGAAATCAAATTCAAGGCCAGTTTTTAAAATCTCTTGTCCACTGCACCCAGTTAGAGGTTTTAAATCTTGGAAACAATCTTATAGCAGAACCATTTCCATGCTTTTTGAGGAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTTTATGGGCGCATTAGATGTCGCAAGACTAATGGCACTTGGCCAGTACTTCAAATCATAGACTTGGCTCACAACAATTTGAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCGATGAGGACTAGCAAAGATAATGCCCCAAGGAATATCCATAGCATTGAATTGGGTAGCATTGAATTGGGAGGGGGAACTTATTATCAAGAAGATACAATCCCAGTTACCAACAAAGGTTTAGAGTTCGAGTTGGTGAATGTTTTAACTATCTTCATCTCAATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCAGAGGAAATTGGAGAACTCAAATCATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTAAGTAACTTGAGTGAGCTAGAGTCTTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACTGGAGCTAACAAAACTCACTTTCCTTGAATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGTAGATAATGGAACAGGGTTCTCTTCACCAAAGCTGGAAGGAAATCATTCAAATCCTGGGCATGAGATTAATTGGGACATTATCTGTCCTGAAATTGGATTTACATGTGGGTTTGGCATTGTCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTCCCTCAGCTAGAACAAAGATTTGGTCATCACAGGAGACATGTTTATGCACATCAAAGATACTGGAAACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1119

Amino Acids

124.69

Weight (kDa)

7.98

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 68 2.1e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 227 - 286 9.3e-07 Leucine rich repeat
LRR_14 PF23598 301 - 480 4.2e-07 Leucine-rich repeat region
LRR_8 PF13855 595 - 637 2.3e-06 Leucine rich repeat
LRR_8 PF13855 601 - 660 9.2e-07 Leucine rich repeat
LRR_8 PF13855 722 - 778 3.9e-08 Leucine rich repeat
LRR_8 PF13855 940 - 999 9.5e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 918
AatII GACGTC 1 cut(s) 1582
Acc36I ACCTGC 1 cut(s) 918
AccB1I GGYRCC 1 cut(s) 582
AccB7I CCANNNNNTGG 1 cut(s) 1170
AccBSI CCGCTC 2 cut(s) 1589, 2928
AccI GTMKAC 2 cut(s) 1639, 2313
AccIII TCCGGA 1 cut(s) 2137
AciI CCGC 5 cut(s) 141, 354, 1587, 2928, 3015
AclI AACGTT 1 cut(s) 3355
AclWI GGATC 5 cut(s) 904, 1365, 1378, 2460, 2794
AcoI YGGCCR 2 cut(s) 312, 2516
AcuI CTGAAG 2 cut(s) 887, 2150
AcyI GRCGYC 2 cut(s) 192, 1579
AfaI GTAC 9 cut(s) 169, 1153, 1665, 1886, 1955, 2068, 2244, 2523, 2568
AfiI CCNNNNNNNGG 8 cut(s) 310, 696, 731, 893, 1170, 1634, 2377, 3182
AflIII ACRYGT 3 cut(s) 510, 3191, 3325
AjnI CCWGG 3 cut(s) 730, 2569, 3142
AjuI GAANNNNNNNTTGG 4 cut(s) 2834, 2866, 3291, 3323
Alw21I GWGCWC 2 cut(s) 2234, 3022
Alw26I GTCTC 4 cut(s) 281, 687, 776, 3316
AlwI GGATC 5 cut(s) 904, 1365, 1378, 2460, 2794
AlwNI CAGNNNCTG 1 cut(s) 910
Ama87I CYCGRG 3 cut(s) 775, 886, 2035
Aor13HI TCCGGA 1 cut(s) 2137
AoxI GGCC 7 cut(s) 312, 649, 1104, 1547, 2338, 2516, 3074
ApeKI GCWGC 5 cut(s) 120, 201, 237, 251, 3041
ArsI GACNNNNNNTTYG 2 cut(s) 3295, 3327
AseI ATTAAT 2 cut(s) 1158, 3156
Asp700I GAANNNNTTC 3 cut(s) 1657, 2415, 3133
AspLEI GCGC 2 cut(s) 724, 2487
AsuC2I CCSGG 3 cut(s) 776, 777, 2212
AsuHPI GGTGA 4 cut(s) 997, 2573, 2743, 3105
AvaI CYCGRG 3 cut(s) 775, 886, 2035
AvaII GGWCC 8 cut(s) 619, 708, 1010, 1298, 1460, 1505, 1819, 2905
AxyI CCTNAGG 1 cut(s) 614
BalI TGGCCA 1 cut(s) 2518
BamHI GGATCC 1 cut(s) 1370
BanI GGYRCC 1 cut(s) 582
BauI CACGAG 1 cut(s) 634
BbsI GAAGAC 1 cut(s) 1317
Bbv12I GWGCWC 2 cut(s) 2234, 3022
BbvCI CCTCAGC 1 cut(s) 3291
BbvI GCAGC 5 cut(s) 132, 213, 249, 263, 3053
BceAI ACGGC 1 cut(s) 189
BcgI CGANNNNNNTGC 4 cut(s) 1522, 1556, 3193, 3227
BciT130I CCWGG 3 cut(s) 732, 2571, 3144
BciVI GTATCC 1 cut(s) 3000
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 3 cut(s) 776, 777, 2212
BcoDI GTCTC 4 cut(s) 281, 687, 776, 3316
BfaI CTAG 9 cut(s) 1271, 1433, 1592, 1910, 1919, 2027, 2607, 2894, 3296
BfuAI ACCTGC 1 cut(s) 918
BfuI GTATCC 1 cut(s) 3000
BglII AGATCT 3 cut(s) 810, 1273, 1435
BisI GCNGC 5 cut(s) 121, 202, 238, 252, 3042
BlpI GCTNAGC 2 cut(s) 672, 1185
BlsI GCNGC 5 cut(s) 122, 203, 239, 253, 3043
BmcAI AGTACT 3 cut(s) 169, 2244, 2523
Bme1390I CCNGG 6 cut(s) 732, 776, 777, 2212, 2571, 3144
Bme18I GGWCC 8 cut(s) 619, 708, 1010, 1298, 1460, 1505, 1819, 2905
BmeT110I CYCGRG 3 cut(s) 775, 886, 2035
BmiI GGNNCC 7 cut(s) 584, 620, 871, 1105, 1372, 2208, 3075
BmrFI CCNGG 6 cut(s) 732, 776, 777, 2212, 2571, 3144
BmrI ACTGGG 2 cut(s) 2365, 2693
BmsI GCATC 5 cut(s) 770, 922, 1005, 1409, 3028
BmuI ACTGGG 2 cut(s) 2365, 2693
BpiI GAAGAC 1 cut(s) 1317
BpmI CTGGAG 4 cut(s) 644, 1192, 1354, 2963
Bpu10I CCTNAGC 2 cut(s) 623, 3291
Bpu1102I GCTNAGC 2 cut(s) 672, 1185
BpuEI CTTGAG 5 cut(s) 397, 787, 1810, 1828, 2905
BpuMI CCSGG 3 cut(s) 776, 777, 2212
BsaAI YACGTR 1 cut(s) 1884
BsaBI GATNNNNATC 1 cut(s) 1272
BsaHI GRCGYC 2 cut(s) 192, 1579
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 7 cut(s) 241, 775, 887, 2210, 2624, 3052, 3143
BsaWI WCCGGW 2 cut(s) 1007, 2137
BsaXI ACNNNNNCTCC 2 cut(s) 1858, 1888
Bsc4I CCNNNNNNNGG 8 cut(s) 310, 696, 731, 893, 1170, 1634, 2377, 3182
Bse21I CCTNAGG 1 cut(s) 614
Bse3DI GCAATG 1 cut(s) 101
Bse8I GATNNNNATC 1 cut(s) 1272
BseAI TCCGGA 1 cut(s) 2137
BseBI CCWGG 3 cut(s) 732, 2571, 3144
BseDI CCNNGG 7 cut(s) 241, 775, 887, 2210, 2624, 3052, 3143
BseGI GGATG 5 cut(s) 350, 785, 1065, 1270, 2438
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 8 cut(s) 310, 696, 731, 893, 1170, 1634, 2377, 3182
BseMI GCAATG 1 cut(s) 101
BseMII CTCAG 7 cut(s) 614, 628, 660, 1640, 1954, 2915, 3305
BseXI GCAGC 5 cut(s) 132, 213, 249, 263, 3053
BseYI CCCAGC 1 cut(s) 1396
BsgI GTGCAG 2 cut(s) 2350, 2880
BshFI GGCC 7 cut(s) 314, 651, 1106, 1549, 2340, 2518, 3076
BshNI GGYRCC 1 cut(s) 582
BsiHKAI GWGCWC 2 cut(s) 2234, 3022
BsiHKCI CYCGRG 3 cut(s) 775, 886, 2035
BsiSI CCGG 4 cut(s) 776, 1008, 2138, 2212
BslFI GGGAC 2 cut(s) 649, 3176
BslI CCNNNNNNNGG 8 cut(s) 310, 696, 731, 893, 1170, 1634, 2377, 3182
BsmAI GTCTC 4 cut(s) 281, 687, 776, 3316
BsmFI GGGAC 2 cut(s) 649, 3176
BsmI GAATGC 1 cut(s) 166
BsnI GGCC 7 cut(s) 314, 651, 1106, 1549, 2340, 2518, 3076
Bso31I GGTCTC 1 cut(s) 687
BsoBI CYCGRG 3 cut(s) 775, 886, 2035
Bsp1286I GDGCHC 2 cut(s) 2234, 3022
Bsp13I TCCGGA 1 cut(s) 2137
Bsp1720I GCTNAGC 2 cut(s) 672, 1185
BspACI CCGC 5 cut(s) 141, 354, 1587, 2928, 3015
BspANI GGCC 7 cut(s) 314, 651, 1106, 1549, 2340, 2518, 3076
BspCNI CTCAG 7 cut(s) 615, 627, 659, 1641, 1953, 2916, 3304
BspEI TCCGGA 1 cut(s) 2137
BspLI GGNNCC 7 cut(s) 584, 620, 871, 1105, 1372, 2208, 3075
BspMI ACCTGC 1 cut(s) 918
BspPI GGATC 5 cut(s) 904, 1365, 1378, 2460, 2794
BspT107I GGYRCC 1 cut(s) 582
BspTNI GGTCTC 1 cut(s) 687
BsrBI CCGCTC 2 cut(s) 1589, 2928
BsrDI GCAATG 1 cut(s) 101
BssECI CCNNGG 7 cut(s) 241, 775, 887, 2210, 2624, 3052, 3143
BssNI GRCGYC 2 cut(s) 192, 1579
BssSI CACGAG 1 cut(s) 634
BssT1I CCWWGG 3 cut(s) 241, 2624, 3052
Bst2BI CACGAG 1 cut(s) 634
Bst2UI CCWGG 3 cut(s) 732, 2571, 3144
Bst4CI ACNGT 6 cut(s) 763, 1044, 2015, 2206, 2311, 3088
Bst6I CTCTTC 5 cut(s) 284, 906, 1257, 1419, 3115
BstACI GRCGYC 2 cut(s) 192, 1579
BstBAI YACGTR 1 cut(s) 1884
BstC8I GCNNGC 3 cut(s) 1574, 2234, 2595
BstF5I GGATG 5 cut(s) 350, 785, 1065, 1270, 2438
BstHHI GCGC 2 cut(s) 724, 2487
BstMAI GTCTC 4 cut(s) 281, 687, 776, 3316
BstMWI GCNNNNNNNGC 1 cut(s) 198
BstNI CCWGG 3 cut(s) 732, 2571, 3144
BstNSI RCATGY 4 cut(s) 631, 3195, 3274, 3329
BstSCI CCNGG 6 cut(s) 730, 774, 775, 2210, 2569, 3142
BstSNI TACGTA 1 cut(s) 1884
BstV1I GCAGC 5 cut(s) 132, 213, 249, 263, 3053
BstV2I GAAGAC 1 cut(s) 1317
BstX2I RGATCY 5 cut(s) 810, 896, 1273, 1370, 1435
BstXI CCANNNNNNTGG 4 cut(s) 866, 1114, 1841, 1982
BstYI RGATCY 5 cut(s) 810, 896, 1273, 1370, 1435
Bsu36I CCTNAGG 1 cut(s) 614
BsuI GTATCC 1 cut(s) 3000
BsuRI GGCC 7 cut(s) 314, 651, 1106, 1549, 2340, 2518, 3076
BtgZI GCGATG 1 cut(s) 2612
BtsCI GGATG 5 cut(s) 350, 785, 1065, 1270, 2438
BtsI GCAGTG 2 cut(s) 1550, 2362
BtsIMutI CAGTG 8 cut(s) 83, 1105, 1168, 1550, 2091, 2326, 2362, 2939
BveI ACCTGC 1 cut(s) 918
Cac8I GCNNGC 3 cut(s) 1574, 2234, 2595
CaiI CAGNNNCTG 1 cut(s) 910
CfoI GCGC 2 cut(s) 724, 2487
Cfr9I CCCGGG 1 cut(s) 775
CpoI CGGWCCG 1 cut(s) 1010
CseI GACGC 1 cut(s) 181
Csp6I GTAC 9 cut(s) 168, 1152, 1664, 1885, 1954, 2067, 2243, 2522, 2567
CspCI CAANNNNNGTGG 2 cut(s) 2539, 2574
CspI CGGWCCG 1 cut(s) 1010
CviQI GTAC 9 cut(s) 168, 1152, 1664, 1885, 1954, 2067, 2243, 2522, 2567
DraI TTTAAA 2 cut(s) 2349, 2385
EaeI YGGCCR 2 cut(s) 312, 2516
Eam1104I CTCTTC 5 cut(s) 284, 906, 1257, 1419, 3115
EarI CTCTTC 5 cut(s) 284, 906, 1257, 1419, 3115
EciI GGCGGA 1 cut(s) 130
Eco105I TACGTA 1 cut(s) 1884
Eco130I CCWWGG 3 cut(s) 241, 2624, 3052
Eco31I GGTCTC 1 cut(s) 687
Eco47I GGWCC 8 cut(s) 619, 708, 1010, 1298, 1460, 1505, 1819, 2905
Eco57I CTGAAG 2 cut(s) 887, 2150
Eco81I CCTNAGG 1 cut(s) 614
Eco88I CYCGRG 3 cut(s) 775, 886, 2035
EcoO109I RGGNCCY 3 cut(s) 619, 650, 3074
EcoRI GAATTC 3 cut(s) 881, 2282, 2969
EcoRII CCWGG 3 cut(s) 730, 2569, 3142
EcoT14I CCWWGG 3 cut(s) 241, 2624, 3052
ErhI CCWWGG 3 cut(s) 241, 2624, 3052
FaqI GGGAC 2 cut(s) 649, 3176
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 2 cut(s) 1639, 2313
Fnu4HI GCNGC 5 cut(s) 121, 202, 238, 252, 3042
FokI GGATG 5 cut(s) 337, 792, 1072, 1277, 2425
Fsp4HI GCNGC 5 cut(s) 121, 202, 238, 252, 3042
FspBI CTAG 9 cut(s) 1271, 1433, 1592, 1910, 1919, 2027, 2607, 2894, 3296
GlaI GCGC 2 cut(s) 723, 2486
GluI GCNGC 5 cut(s) 121, 202, 238, 252, 3042
GsaI CCCAGC 1 cut(s) 1400
GsuI CTGGAG 4 cut(s) 644, 1192, 1354, 2963
HaeIII GGCC 7 cut(s) 314, 651, 1106, 1549, 2340, 2518, 3076
HapII CCGG 4 cut(s) 776, 1008, 2138, 2212
HgaI GACGC 1 cut(s) 181
HhaI GCGC 2 cut(s) 724, 2487
Hin1I GRCGYC 2 cut(s) 192, 1579
Hin6I GCGC 2 cut(s) 722, 2485
HinP1I GCGC 2 cut(s) 722, 2485
HindIII AAGCTT 2 cut(s) 146, 674
HpaII CCGG 4 cut(s) 776, 1008, 2138, 2212
HphI GGTGA 4 cut(s) 997, 2573, 2743, 3105
Hpy166II GTNNAC 6 cut(s) 70, 978, 1640, 2089, 2314, 2362
Hpy188I TCNGA 8 cut(s) 362, 387, 522, 565, 598, 850, 1828, 2169
Hpy8I GTNNAC 6 cut(s) 70, 978, 1640, 2089, 2314, 2362
Hpy99I CGWCG 1 cut(s) 1581
HpyAV CCTTC 9 cut(s) 35, 614, 834, 1073, 1501, 1538, 1938, 3058, 3119
HpyCH4III ACNGT 6 cut(s) 763, 1044, 2015, 2206, 2311, 3088
HpyCH4IV ACGT 4 cut(s) 512, 1579, 1883, 3355
HpyF10VI GCNNNNNNNGC 1 cut(s) 198
HpySE526I ACGT 4 cut(s) 512, 1579, 1883, 3355
Hsp92I GRCGYC 2 cut(s) 192, 1579
HspAI GCGC 2 cut(s) 722, 2485
Kpn2I TCCGGA 1 cut(s) 2137
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 2 cut(s) 111, 2944
Lsp1109I GCAGC 5 cut(s) 132, 213, 249, 263, 3053
LweI GCATC 5 cut(s) 770, 922, 1005, 1409, 3028
MaeI CTAG 9 cut(s) 1271, 1433, 1592, 1910, 1919, 2027, 2607, 2894, 3296
MaeII ACGT 4 cut(s) 512, 1579, 1883, 3355
MaeIII GTNAC 9 cut(s) 193, 332, 819, 1067, 1943, 2701, 2879, 3056, 3216
MbiI CCGCTC 2 cut(s) 1589, 2928
MfeI CAATTG 2 cut(s) 2757, 2993
MflI RGATCY 5 cut(s) 810, 896, 1273, 1370, 1435
MhlI GDGCHC 2 cut(s) 2234, 3022
MlsI TGGCCA 1 cut(s) 2518
MluNI TGGCCA 1 cut(s) 2518
MlyI GAGTC 3 cut(s) 778, 1876, 2906
MmeI TCCRAC 4 cut(s) 681, 1056, 1995, 2865
Mox20I TGGCCA 1 cut(s) 2518
MroI TCCGGA 1 cut(s) 2137
MroXI GAANNNNTTC 3 cut(s) 1657, 2415, 3133
MscI TGGCCA 1 cut(s) 2518
MslI CAYNNNNRTG 2 cut(s) 2419, 3330
Msp20I TGGCCA 1 cut(s) 2518
MspA1I CMGCKG 3 cut(s) 254, 273, 1648
MspI CCGG 4 cut(s) 776, 1008, 2138, 2212
MspR9I CCNGG 6 cut(s) 732, 776, 777, 2212, 2571, 3144
MunI CAATTG 2 cut(s) 2757, 2993
Mva1269I GAATGC 1 cut(s) 166
MvaI CCWGG 3 cut(s) 732, 2571, 3144
MwoI GCNNNNNNNGC 1 cut(s) 198
NciI CCSGG 3 cut(s) 776, 777, 2212
NlaIV GGNNCC 7 cut(s) 584, 620, 871, 1105, 1372, 2208, 3075
NmeAIII GCCGAG 2 cut(s) 611, 1714
NmuCI GTSAC 2 cut(s) 193, 3216
NspI RCATGY 4 cut(s) 631, 3195, 3274, 3329
PaeR7I CTCGAG 1 cut(s) 2035
PaqCI CACCTGC 1 cut(s) 918
PciI ACATGT 2 cut(s) 3191, 3325
PctI GAATGC 1 cut(s) 166
PdmI GAANNNNTTC 3 cut(s) 1657, 2415, 3133
PfeI GAWTC 8 cut(s) 246, 599, 735, 1913, 2097, 2141, 2170, 2977
PflMI CCANNNNNTGG 1 cut(s) 1170
PfoI TCCNGGA 1 cut(s) 730
PkrI GCNGC 5 cut(s) 122, 203, 239, 253, 3043
PleI GAGTC 3 cut(s) 777, 1875, 2905
PpsI GAGTC 3 cut(s) 777, 1875, 2905
Ppu21I YACGTR 1 cut(s) 1884
PpuMI RGGWCCY 1 cut(s) 619
PscI ACATGT 2 cut(s) 3191, 3325
PshBI ATTAAT 2 cut(s) 1158, 3156
Psp1406I AACGTT 1 cut(s) 3355
Psp5II RGGWCCY 1 cut(s) 619
Psp6I CCWGG 3 cut(s) 730, 2569, 3142
PspFI CCCAGC 1 cut(s) 1396
PspGI CCWGG 3 cut(s) 730, 2569, 3142
PspN4I GGNNCC 7 cut(s) 584, 620, 871, 1105, 1372, 2208, 3075
PspPPI RGGWCCY 1 cut(s) 619
PstNI CAGNNNCTG 1 cut(s) 910
PsuI RGATCY 5 cut(s) 810, 896, 1273, 1370, 1435
PvuII CAGCTG 3 cut(s) 254, 273, 1648
RsaI GTAC 9 cut(s) 169, 1153, 1665, 1886, 1955, 2068, 2244, 2523, 2568
RsaNI GTAC 9 cut(s) 168, 1152, 1664, 1885, 1954, 2067, 2243, 2522, 2567
RseI CAYNNNNRTG 2 cut(s) 2419, 3330
Rsr2I CGGWCCG 1 cut(s) 1010
RsrII CGGWCCG 1 cut(s) 1010
SatI GCNGC 5 cut(s) 121, 202, 238, 252, 3042
ScaI AGTACT 3 cut(s) 169, 2244, 2523
SchI GAGTC 3 cut(s) 778, 1876, 2906
ScrFI CCNGG 6 cut(s) 732, 776, 777, 2212, 2571, 3144
SduI GDGCHC 2 cut(s) 2234, 3022
SfaNI GCATC 5 cut(s) 770, 922, 1005, 1409, 3028
Sfr274I CTCGAG 1 cut(s) 2035
SinI GGWCC 8 cut(s) 619, 708, 1010, 1298, 1460, 1505, 1819, 2905
SlaI CTCGAG 1 cut(s) 2035
SmaI CCCGGG 1 cut(s) 777
SmiMI CAYNNNNRTG 2 cut(s) 2419, 3330
SmlI CTYRAG 6 cut(s) 376, 766, 1789, 1807, 2035, 2884
SmoI CTYRAG 6 cut(s) 376, 766, 1789, 1807, 2035, 2884
SnaBI TACGTA 1 cut(s) 1884
SsiI CCGC 5 cut(s) 141, 354, 1587, 2928, 3015
SspI AATATT 1 cut(s) 1657
SspMI CTAG 9 cut(s) 1271, 1433, 1592, 1910, 1919, 2027, 2607, 2894, 3296
StyD4I CCNGG 6 cut(s) 730, 774, 775, 2210, 2569, 3142
StyI CCWWGG 3 cut(s) 241, 2624, 3052
TaaI ACNGT 6 cut(s) 763, 1044, 2015, 2206, 2311, 3088
TaiI ACGT 4 cut(s) 515, 1582, 1886, 3358
TaqI TCGA 8 cut(s) 864, 1200, 1221, 1383, 1542, 2036, 2724, 2912
TaqII GACCGA 2 cut(s) 669, 1027
TatI WGTACW 4 cut(s) 167, 1663, 2242, 2521
TfiI GAWTC 8 cut(s) 246, 599, 735, 1913, 2097, 2141, 2170, 2977
TscAI CASTG 8 cut(s) 83, 1105, 1175, 1557, 2098, 2326, 2369, 2946
TseFI GTSAC 2 cut(s) 193, 3216
TseI GCWGC 5 cut(s) 120, 201, 237, 251, 3041
Tsp45I GTSAC 2 cut(s) 193, 3216
TspDTI ATGAA 6 cut(s) 17, 278, 1778, 1970, 2295, 2740
TspGWI ACGGA 3 cut(s) 679, 1080, 2799
TspMI CCCGGG 1 cut(s) 775
TspRI CASTG 8 cut(s) 83, 1105, 1175, 1557, 2098, 2326, 2369, 2946
Van91I CCANNNNNTGG 1 cut(s) 1170
VpaK11BI GGWCC 8 cut(s) 619, 708, 1010, 1298, 1460, 1505, 1819, 2905
VspI ATTAAT 2 cut(s) 1158, 3156
XbaI TCTAGA 5 cut(s) 1270, 1432, 1591, 1918, 2026
XceI RCATGY 4 cut(s) 631, 3195, 3274, 3329
XhoI CTCGAG 1 cut(s) 2035
XmaI CCCGGG 1 cut(s) 775
XmiI GTMKAC 2 cut(s) 1639, 2313
XmnI GAANNNNTTC 3 cut(s) 1657, 2415, 3133
XspI CTAG 9 cut(s) 1271, 1433, 1592, 1910, 1919, 2027, 2607, 2894, 3296
ZraI GACGTC 1 cut(s) 1580
ZrmI AGTACT 3 cut(s) 169, 2244, 2523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.