Rorug03G0165600

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
13814515 .. 13820349
5835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0165600.1

Sequence Viewer

Length: 1002 bp
ATGGCTGGCCAAGAGCATGAGTCTGGTATTATGCAGTGGGCTCTTAGTCTACTTGATGGCGATCCAGCTTATAATACTGTCTATTATGGTGACATGATACAACACGATGCTAATGACATCTACCGCGGACAATATATTAGAGGTCAATATGGTACCGAATCTAACCATGTAGAGAATGATGAGATCATTGCACACACACTTCAAGAAGAATATTCACGACTATCTGTAGCAGACGCCTCTGGATACTCACATGGAGATGAAGAGCAATCACAAGCATCTACTCATGCAGATGATTGGTATAGTTTGTCCAGAAGGAACTATTGTTCAGACAGTGATTATCCAAATGAAGGAGCATGCACAGTGGTGCCTTCTAGTTCATGTTCTAGCCCAGGTCATTTGGAGTTAACTGATGAGTGTGCAGTTGACGGTGAAGTAGGCTGGAGCTTCAATGAAATGATGCCCGTTCCTCATATTCCTAGAATTAATGGAGAAATTCCTTCAATTGATGAAGCTACTTCAGATCATCAGAGGCTGCTTGACAGACTGCAATTATATGGCGTCGTGGAGCGTAAGGTTCAAGGAGATGGTAACTGTCAGTTTAGTGCTTTATCAGACCAATTGTATCACTCACCAGACCACCACAATGATGTGAGAAGGAAAGTCGTAAATCAGCTTAAGGCTCACCCAGAAATTTACGAGGGATATGTTCCAATGGCATACGATGACTATTTGGAGAAGATGTCAAAGAGTGGCCAGTGGGGTGATCATGTTACATTGCAGGCTGCTGCTGATTCGTATGGTGTGAAAATATTTGTCTTCACTTCTTTTAAGGATACATGTTGCATAGAGATTCTTCCTAATGTCCAAACGTCAAAACAAGTTATTATGTTGAGTTTCTGGGCAGAGGTGCATTACAACTCAATTTATCCTCAAGAAGGTACACCCTCCTCAGATGAGTATAGAAAGAAGAAAAAGTGGTGGATATTTGGGAATAAAAATTAA

Protein Analysis

333

Amino Acids

37.76

Weight (kDa)

4.78

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OTU PF02338 193 - 280 5e-12 OTU-like cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 152, 364
AccI GTMKAC 1 cut(s) 49
AccII CGCG 1 cut(s) 126
AciI CCGC 2 cut(s) 124, 126
AclWI GGATC 1 cut(s) 56
AcoI YGGCCR 2 cut(s) 7, 751
AcsI RAATTY 2 cut(s) 492, 690
AcuI CTGAAG 1 cut(s) 501
AcyI GRCGYC 2 cut(s) 234, 558
AfaI GTAC 2 cut(s) 154, 940
AfiI CCNNNNNNNGG 2 cut(s) 347, 935
AflII CTTAAG 1 cut(s) 674
AflIII ACRYGT 1 cut(s) 836
AgsI TTSAA 4 cut(s) 203, 448, 501, 578
AjnI CCWGG 1 cut(s) 388
AleI CACNNNNGTG 1 cut(s) 362
AloI GAACNNNNNNTCC 2 cut(s) 307, 339
AluBI AGCT 4 cut(s) 68, 444, 512, 673
AluI AGCT 4 cut(s) 68, 444, 512, 673
AlwI GGATC 1 cut(s) 56
AlwNI CAGNNNCTG 1 cut(s) 532
AoxI GGCC 2 cut(s) 7, 751
ApeKI GCWGC 3 cut(s) 532, 782, 785
ApoI RAATTY 2 cut(s) 492, 690
AseI ATTAAT 1 cut(s) 483
Asp718I GGTACC 1 cut(s) 152
AsuHPI GGTGA 5 cut(s) 101, 440, 621, 674, 773
BalI TGGCCA 2 cut(s) 9, 753
BanI GGYRCC 2 cut(s) 152, 364
BanII GRGCYC 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 808
BbvI GCAGC 3 cut(s) 519, 769, 772
BccI CCATC 2 cut(s) 50, 578
BciT130I CCWGG 1 cut(s) 390
BciVI GTATCC 2 cut(s) 236, 826
BclI TGATCA 1 cut(s) 763
BfaI CTAG 3 cut(s) 372, 384, 477
BfmI CTRYAG 1 cut(s) 225
BfrI CTTAAG 1 cut(s) 674
BfuI GTATCC 2 cut(s) 236, 826
BisI GCNGC 3 cut(s) 533, 783, 786
BlsI GCNGC 3 cut(s) 534, 784, 787
Bme1390I CCNGG 1 cut(s) 390
BmiI GGNNCC 2 cut(s) 154, 366
BmrFI CCNGG 1 cut(s) 390
BmsI GCATC 3 cut(s) 97, 284, 447
BpiI GAAGAC 1 cut(s) 808
BpmI CTGGAG 1 cut(s) 460
BpuEI CTTGAG 1 cut(s) 915
BsaBI GATNNNNATC 1 cut(s) 60
BsaHI GRCGYC 2 cut(s) 234, 558
BsaJI CCNNGG 2 cut(s) 124, 388
BsaXI ACNNNNNCTCC 2 cut(s) 725, 755
Bsc4I CCNNNNNNNGG 2 cut(s) 347, 935
Bse1I ACTGG 1 cut(s) 754
Bse3DI GCAATG 2 cut(s) 186, 773
Bse8I GATNNNNATC 1 cut(s) 60
BseBI CCWGG 1 cut(s) 390
BseDI CCNNGG 2 cut(s) 124, 388
BseJI GATNNNNATC 1 cut(s) 60
BseLI CCNNNNNNNGG 2 cut(s) 347, 935
BseMI GCAATG 2 cut(s) 186, 773
BseMII CTCAG 1 cut(s) 963
BseNI ACTGG 1 cut(s) 754
BseRI GAGGAG 1 cut(s) 937
BseXI GCAGC 3 cut(s) 519, 769, 772
BsgI GTGCAG 1 cut(s) 438
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 2 cut(s) 9, 753
BshNI GGYRCC 2 cut(s) 152, 364
BslI CCNNNNNNNGG 2 cut(s) 347, 935
BsnI GGCC 2 cut(s) 9, 753
Bsp1286I GDGCHC 1 cut(s) 43
Bsp143I GATC 4 cut(s) 61, 183, 520, 763
BspACI CCGC 2 cut(s) 124, 126
BspANI GGCC 2 cut(s) 9, 753
BspCNI CTCAG 1 cut(s) 962
BspFNI CGCG 1 cut(s) 126
BspLI GGNNCC 2 cut(s) 154, 366
BspPI GGATC 1 cut(s) 56
BspQI GCTCTTC 1 cut(s) 255
BspT107I GGYRCC 2 cut(s) 152, 364
BspTI CTTAAG 1 cut(s) 674
BsrDI GCAATG 2 cut(s) 186, 773
BsrI ACTGG 1 cut(s) 754
BssECI CCNNGG 2 cut(s) 124, 388
BssMI GATC 4 cut(s) 61, 183, 520, 763
BssNI GRCGYC 2 cut(s) 234, 558
Bst2UI CCWGG 1 cut(s) 390
Bst4CI ACNGT 5 cut(s) 79, 332, 361, 428, 593
Bst6I CTCTTC 1 cut(s) 255
BstACI GRCGYC 2 cut(s) 234, 558
BstAFI CTTAAG 1 cut(s) 674
BstC8I GCNNGC 3 cut(s) 7, 355, 780
BstDEI CTNAG 2 cut(s) 44, 949
BstDSI CCRYGG 1 cut(s) 124
BstENI CCTNNNNNAGG 1 cut(s) 933
BstFNI CGCG 1 cut(s) 126
BstKTI GATC 4 cut(s) 64, 186, 523, 766
BstMBI GATC 4 cut(s) 61, 183, 520, 763
BstNI CCWGG 1 cut(s) 390
BstNSI RCATGY 2 cut(s) 357, 840
BstSCI CCNGG 1 cut(s) 388
BstSFI CTRYAG 1 cut(s) 225
BstUI CGCG 1 cut(s) 126
BstV1I GCAGC 3 cut(s) 519, 769, 772
BstV2I GAAGAC 1 cut(s) 808
BsuI GTATCC 2 cut(s) 236, 826
BsuRI GGCC 2 cut(s) 9, 753
BtgI CCRYGG 1 cut(s) 124
BtsI GCAGTG 1 cut(s) 41
BtsIMutI CAGTG 4 cut(s) 41, 337, 366, 761
Cac8I GCNNGC 3 cut(s) 7, 355, 780
CaiI CAGNNNCTG 1 cut(s) 532
Cfr42I CCGCGG 1 cut(s) 127
CseI GACGC 2 cut(s) 242, 547
Csp6I GTAC 2 cut(s) 153, 939
CviAII CATG 9 cut(s) 17, 94, 167, 251, 284, 354, 378, 767, 837
CviQI GTAC 2 cut(s) 153, 939
DdeI CTNAG 2 cut(s) 44, 949
DpnI GATC 4 cut(s) 63, 185, 522, 765
DpnII GATC 4 cut(s) 61, 183, 520, 763
EaeI YGGCCR 2 cut(s) 7, 751
Eam1104I CTCTTC 1 cut(s) 255
EarI CTCTTC 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 501
EcoNI CCTNNNNNAGG 1 cut(s) 933
EcoRII CCWGG 1 cut(s) 388
EcoT38I GRGCYC 1 cut(s) 43
FaeI CATG 9 cut(s) 20, 97, 170, 254, 287, 357, 381, 770, 840
FatI CATG 9 cut(s) 16, 93, 166, 250, 283, 353, 377, 766, 836
FbaI TGATCA 1 cut(s) 763
FblI GTMKAC 1 cut(s) 49
Fnu4HI GCNGC 3 cut(s) 533, 783, 786
FriOI GRGCYC 1 cut(s) 43
Fsp4HI GCNGC 3 cut(s) 533, 783, 786
FspBI CTAG 3 cut(s) 372, 384, 477
GluI GCNGC 3 cut(s) 533, 783, 786
GsuI CTGGAG 1 cut(s) 460
HaeIII GGCC 2 cut(s) 9, 753
HgaI GACGC 2 cut(s) 242, 547
Hin1I GRCGYC 2 cut(s) 234, 558
Hin1II CATG 9 cut(s) 20, 97, 170, 254, 287, 357, 381, 770, 840
HincII GTYRAC 2 cut(s) 405, 424
HindII GTYRAC 2 cut(s) 405, 424
HinfI GANTC 4 cut(s) 20, 158, 791, 850
HpaI GTTAAC 1 cut(s) 405
HphI GGTGA 5 cut(s) 101, 440, 621, 674, 773
Hpy166II GTNNAC 4 cut(s) 50, 405, 424, 941
Hpy188I TCNGA 5 cut(s) 328, 520, 528, 613, 952
Hpy188III TCNNGA 5 cut(s) 203, 216, 240, 309, 932
Hpy8I GTNNAC 4 cut(s) 50, 405, 424, 941
Hpy99I CGWCG 1 cut(s) 563
HpyAV CCTTC 6 cut(s) 306, 341, 378, 507, 648, 929
HpyCH4III ACNGT 5 cut(s) 79, 332, 361, 428, 593
HpyCH4IV ACGT 1 cut(s) 869
HpyCH4V TGCA 9 cut(s) 34, 191, 287, 357, 419, 547, 778, 843, 910
HpyF3I CTNAG 2 cut(s) 44, 949
HpySE526I ACGT 1 cut(s) 869
Hsp92I GRCGYC 2 cut(s) 234, 558
Hsp92II CATG 9 cut(s) 20, 97, 170, 254, 287, 357, 381, 770, 840
KpnI GGTACC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 763
KspAI GTTAAC 1 cut(s) 405
KspI CCGCGG 1 cut(s) 127
Kzo9I GATC 4 cut(s) 61, 183, 520, 763
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 3 cut(s) 350, 441, 565
Lsp1109I GCAGC 3 cut(s) 519, 769, 772
LweI GCATC 3 cut(s) 97, 284, 447
MaeI CTAG 3 cut(s) 372, 384, 477
MaeII ACGT 1 cut(s) 869
MaeIII GTNAC 3 cut(s) 89, 587, 769
MalI GATC 4 cut(s) 63, 185, 522, 765
MboI GATC 4 cut(s) 61, 183, 520, 763
MboII GAAGA 6 cut(s) 218, 272, 748, 808, 845, 979
MfeI CAATTG 2 cut(s) 501, 617
MhlI GDGCHC 1 cut(s) 43
MlsI TGGCCA 2 cut(s) 9, 753
MluCI AATT 8 cut(s) 480, 492, 501, 548, 617, 690, 921, 997
MluNI TGGCCA 2 cut(s) 9, 753
MlyI GAGTC 1 cut(s) 29
MnlI CCTC 9 cut(s) 134, 247, 477, 522, 691, 898, 939, 955, 958
Mox20I TGGCCA 2 cut(s) 9, 753
MscI TGGCCA 2 cut(s) 9, 753
MseI TTAA 5 cut(s) 404, 483, 675, 828, 1000
MslI CAYNNNNRTG 5 cut(s) 255, 288, 362, 642, 645
Msp20I TGGCCA 2 cut(s) 9, 753
MspA1I CMGCKG 1 cut(s) 126
MspCI CTTAAG 1 cut(s) 674
MspR9I CCNGG 1 cut(s) 390
MunI CAATTG 2 cut(s) 501, 617
MvaI CCWGG 1 cut(s) 390
MvnI CGCG 1 cut(s) 126
NdeII GATC 4 cut(s) 61, 183, 520, 763
NlaIII CATG 9 cut(s) 20, 97, 170, 254, 287, 357, 381, 770, 840
NlaIV GGNNCC 2 cut(s) 154, 366
NmuCI GTSAC 1 cut(s) 89
NspI RCATGY 2 cut(s) 357, 840
OliI CACNNNNGTG 1 cut(s) 362
PaeI GCATGC 1 cut(s) 357
PciI ACATGT 1 cut(s) 836
PciSI GCTCTTC 1 cut(s) 255
PfeI GAWTC 3 cut(s) 158, 791, 850
PkrI GCNGC 3 cut(s) 534, 784, 787
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
PscI ACATGT 1 cut(s) 836
PshBI ATTAAT 1 cut(s) 483
PsiI TTATAA 1 cut(s) 72
Psp6I CCWGG 1 cut(s) 388
PspGI CCWGG 1 cut(s) 388
PspN4I GGNNCC 2 cut(s) 154, 366
PstNI CAGNNNCTG 1 cut(s) 532
RsaI GTAC 2 cut(s) 154, 940
RsaNI GTAC 2 cut(s) 153, 939
RseI CAYNNNNRTG 5 cut(s) 255, 288, 362, 642, 645
SacII CCGCGG 1 cut(s) 127
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 5 cut(s) 404, 483, 675, 828, 1000
SatI GCNGC 3 cut(s) 533, 783, 786
Sau3AI GATC 4 cut(s) 61, 183, 520, 763
SchI GAGTC 1 cut(s) 29
ScrFI CCNGG 1 cut(s) 390
SduI GDGCHC 1 cut(s) 43
SfaNI GCATC 3 cut(s) 97, 284, 447
SfcI CTRYAG 1 cut(s) 225
Sfr303I CCGCGG 1 cut(s) 127
SgrBI CCGCGG 1 cut(s) 127
SmiMI CAYNNNNRTG 5 cut(s) 255, 288, 362, 642, 645
SmlI CTYRAG 2 cut(s) 674, 930
SmoI CTYRAG 2 cut(s) 674, 930
SphI GCATGC 1 cut(s) 357
Sse9I AATT 8 cut(s) 480, 492, 501, 548, 617, 690, 921, 997
SsiI CCGC 2 cut(s) 124, 126
SspI AATATT 2 cut(s) 212, 810
SspMI CTAG 3 cut(s) 372, 384, 477
StyD4I CCNGG 1 cut(s) 388
TaaI ACNGT 5 cut(s) 79, 332, 361, 428, 593
TaiI ACGT 1 cut(s) 872
TasI AATT 8 cut(s) 480, 492, 501, 548, 617, 690, 921, 997
TfiI GAWTC 3 cut(s) 158, 791, 850
Tru1I TTAA 5 cut(s) 404, 483, 675, 828, 1000
Tru9I TTAA 5 cut(s) 404, 483, 675, 828, 1000
TscAI CASTG 4 cut(s) 41, 337, 366, 761
TseFI GTSAC 1 cut(s) 89
TseI GCWGC 3 cut(s) 532, 782, 785
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 5 cut(s) 273, 360, 366, 465, 522
TspRI CASTG 4 cut(s) 41, 337, 366, 761
Vha464I CTTAAG 1 cut(s) 674
VspI ATTAAT 1 cut(s) 483
XagI CCTNNNNNAGG 1 cut(s) 933
XapI RAATTY 2 cut(s) 492, 690
XceI RCATGY 2 cut(s) 357, 840
XmiI GTMKAC 1 cut(s) 49
XspI CTAG 3 cut(s) 372, 384, 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.