Rh1DG234000

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
44671355 .. 44673701
2347 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG234000.1

Sequence Viewer

Length: 1761 bp
ATGTCCAGGTGTGATCTCTCAAGCCCTCTTCTAGAGTCCCTTACTAAGCTTCAGTCTCTATCTGTAATTAGGTTGGGCATGAACAATTTCCCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCTTGAGTCTCATAGAGTGCGGGTTGCATGGAACATTTCCCAAAGAGGTCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAGATAATGACCACCTTGATGGGTCCTTGCCAGAGTTCCCGAGGAATGGATCTCTTCAGTACCTAGATCTAAGCTGGACAAAATTTTCAGGGTTATTGCCAAATTCTATTGGCAATCTCAAAAGGTTGTCCACCATATATATTAAAGATTGCAATTTCACCGGATCGATGCCCAAGTCAATGACAAACCTTACACAATTGGTTTTTTTGTCGATGTCTCGTAACAATTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATATGGTTGTCATAGACCTTTCCTACAACGGTCTAACAGATCTTTCCAACAATCAATTCTCTGGTCCATTCCCTGAAATTTCAAATGTGTCTTCCTACTTGCTGAATGGTCCTGATCTTGAACTTGATTGGAGAAATCAATCTAACTTATCTTATTTGGACCTTTCAGAGAACCAAATAAATGGCAAGATACCCGACTGGATTTGGAGTTTAAGTAATCCATATCTCCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCATTCAATTAATTTCACTAATCTAACTTACCTTGACCTTCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTCCATCACCTTGCAGTGTCTATTATCTAGACTTCTCCAGGAATTATTTCAGCTCTATCATGCCGAGTACCATTGGGGATGTGTTTCTTAACACAAGATTTTTCTCGCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAAGTCACAATTTCTTGAGTTTCTTGATCTGTCCAATAATTCTTTGAGTGGTACAGTTCCCCAATGCTTAACTACAATGAGGAGTCTTGCATTTTTCAACGTAAGGAGAAACAATCTTACAAATGTTGACGACTTCTCTCAGAATTGCCTGTTAAGAACTCTAGACATCAGTGAAAATCACCTTCAAGGCCGGTTTCTGAAATCTCTTGTCAACTGCACCCAGTTAGAGGTTTTAAACCTTGGAAACAATTTGATAACAGAACCATTTCCATGCTTTTTGAGGAACTTGGCCACCTTACGTGTCCTTATCTTGCGATCCAATAAATTTTATGGGCACATTGGATGTCGCAAGACTGATGGCACTTGGCCAGTACTTCAAATCATAGACTTGGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCGATGAGGATTAGCGAAGATGATGCCCCACACAAGATCAAGAACCTCCCACCTCTGGAATTTGGATTTTATTATCGAGTAGATACAATTACAGTTACCACCAAAGGTTTAGAGATGGAGCTGAAGTTTGTCTTAGCTATCTTCACCTCCATTGACTTCTCGTGCAACAAGTTCAACGGATCAATACCAGAGGAAATTGGAGAACTCATATCATTGCGTGCTCTCAACTTGTCCAACAATGCTTTCACAGGAGACATGTTTATGTACATCAAAGATACTGGAGACGTTGAAATGGTTGTGAAGAGCAATGCACCTGACTTGTTGTCGGCCTCATTTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

65.6

Weight (kDa)

5.08

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 91 - 269 7.7e-09 Leucine-rich repeat region
LRR_8 PF13855 376 - 434 4.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 156
AclWI GGATC 5 cut(s) 277, 391, 962, 1284, 1606
AcoI YGGCCR 2 cut(s) 1263, 1340
AcsI RAATTY 5 cut(s) 302, 322, 561, 1298, 1478
AcuI CTGAAG 3 cut(s) 35, 260, 1562
AfaI GTAC 6 cut(s) 281, 892, 1027, 1347, 1392, 1685
AfiI CCNNNNNNNGG 4 cut(s) 104, 266, 1201, 1474
AflIII ACRYGT 2 cut(s) 1273, 1674
AhdI GACNNNNNGTC 1 cut(s) 1741
AjnI CCWGG 4 cut(s) 5, 103, 860, 1393
AjuI GAANNNNNNNTTGG 4 cut(s) 524, 556, 1646, 1678
AluBI AGCT 6 cut(s) 49, 294, 876, 1403, 1540, 1556
AluI AGCT 6 cut(s) 49, 294, 876, 1403, 1540, 1556
Alw21I GWGCWC 1 cut(s) 1642
Alw26I GTCTC 5 cut(s) 60, 149, 441, 1665, 1695
AlwI GGATC 5 cut(s) 277, 391, 962, 1284, 1606
Ama87I CYCGRG 1 cut(s) 259
AoxI GGCC 5 cut(s) 477, 1162, 1263, 1340, 1746
ApoI RAATTY 5 cut(s) 302, 322, 561, 1298, 1478
AseI ATTAAT 1 cut(s) 759
Asp700I GAANNNNTTC 3 cut(s) 86, 869, 1239
AspLEI GCGC 1 cut(s) 97
AspS9I GGNCC 5 cut(s) 243, 477, 548, 593, 643
AsuHPI GGTGA 5 cut(s) 370, 822, 1145, 1397, 1555
AvaI CYCGRG 1 cut(s) 259
AvaII GGWCC 4 cut(s) 243, 548, 593, 643
BaeGI GKGCMC 1 cut(s) 1311
BalI TGGCCA 2 cut(s) 1265, 1342
BauI CACGAG 1 cut(s) 1579
BbsI GAAGAC 1 cut(s) 567
Bbv12I GWGCWC 1 cut(s) 1642
BccI CCATC 4 cut(s) 233, 835, 1325, 1528
BcgI CGANNNNNNTGC 2 cut(s) 1424, 1458
BciT130I CCWGG 4 cut(s) 7, 105, 862, 1395
BcoDI GTCTC 5 cut(s) 60, 149, 441, 1665, 1695
BfaI CTAG 6 cut(s) 32, 284, 734, 743, 851, 1136
BglII AGATCT 2 cut(s) 286, 523
BmcAI AGTACT 1 cut(s) 1347
Bme1390I CCNGG 4 cut(s) 7, 105, 862, 1395
Bme18I GGWCC 4 cut(s) 243, 548, 593, 643
BmeRI GACNNNNNGTC 1 cut(s) 1741
BmeT110I CYCGRG 1 cut(s) 259
BmgT120I GGNCC 5 cut(s) 243, 477, 548, 593, 643
BmiI GGNNCC 2 cut(s) 244, 478
BmrFI CCNGG 4 cut(s) 7, 105, 862, 1395
BmrI ACTGGG 1 cut(s) 1189
BmsI GCATC 2 cut(s) 378, 1432
BmuI ACTGGG 1 cut(s) 1189
BpiI GAAGAC 1 cut(s) 567
BpmI CTGGAG 2 cut(s) 844, 1719
BpuEI CTTGAG 3 cut(s) 4, 160, 1010
Bsa29I ATCGAT 1 cut(s) 386
BsaAI YACGTR 1 cut(s) 1274
BsaJI CCNNGG 2 cut(s) 260, 1213
BsaWI WCCGGW 1 cut(s) 380
BsaXI ACNNNNNCTCC 4 cut(s) 682, 712, 1529, 1559
Bsc4I CCNNNNNNNGG 4 cut(s) 104, 266, 1201, 1474
Bse118I RCCGGY 1 cut(s) 1164
Bse1I ACTGG 6 cut(s) 98, 686, 799, 1195, 1343, 1702
Bse3DI GCAATG 2 cut(s) 1631, 1732
BseBI CCWGG 4 cut(s) 7, 105, 862, 1395
BseCI ATCGAT 1 cut(s) 386
BseDI CCNNGG 2 cut(s) 260, 1213
BseGI GGATG 2 cut(s) 907, 1322
BseLI CCNNNNNNNGG 4 cut(s) 104, 266, 1201, 1474
BseMI GCAATG 2 cut(s) 1631, 1732
BseMII CTCAG 1 cut(s) 1127
BseNI ACTGG 6 cut(s) 98, 686, 799, 1195, 1343, 1702
BseRI GAGGAG 1 cut(s) 1069
BseSI GKGCMC 1 cut(s) 1311
BsgI GTGCAG 1 cut(s) 1174
BshFI GGCC 5 cut(s) 479, 1164, 1265, 1342, 1748
BshVI ATCGAT 1 cut(s) 386
BsiHKAI GWGCWC 1 cut(s) 1642
BsiHKCI CYCGRG 1 cut(s) 259
BsiSI CCGG 2 cut(s) 381, 1165
BslFI GGGAC 1 cut(s) 22
BslI CCNNNNNNNGG 4 cut(s) 104, 266, 1201, 1474
BsmAI GTCTC 5 cut(s) 60, 149, 441, 1665, 1695
BsmBI CGTCTC 1 cut(s) 1695
BsmFI GGGAC 1 cut(s) 22
BsnI GGCC 5 cut(s) 479, 1164, 1265, 1342, 1748
BsoBI CYCGRG 1 cut(s) 259
Bsp1286I GDGCHC 2 cut(s) 1311, 1642
Bsp1407I TGTACA 1 cut(s) 1683
BspACI CCGC 1 cut(s) 156
BspANI GGCC 5 cut(s) 479, 1164, 1265, 1342, 1748
BspCNI CTCAG 1 cut(s) 1126
BspDI ATCGAT 1 cut(s) 386
BspLI GGNNCC 2 cut(s) 244, 478
BspPI GGATC 5 cut(s) 277, 391, 962, 1284, 1606
BspQI GCTCTTC 1 cut(s) 1715
BsrDI GCAATG 2 cut(s) 1631, 1732
BsrFI RCCGGY 1 cut(s) 1164
BsrGI TGTACA 1 cut(s) 1683
BsrI ACTGG 6 cut(s) 98, 686, 799, 1195, 1343, 1702
BssAI RCCGGY 1 cut(s) 1164
BssECI CCNNGG 2 cut(s) 260, 1213
BssSI CACGAG 1 cut(s) 1579
BssT1I CCWWGG 1 cut(s) 1213
Bst2BI CACGAG 1 cut(s) 1579
Bst2UI CCWGG 4 cut(s) 7, 105, 862, 1395
Bst4CI ACNGT 4 cut(s) 136, 515, 1030, 1513
Bst6I CTCTTC 3 cut(s) 33, 279, 1715
BstAUI TGTACA 1 cut(s) 1683
BstBAI YACGTR 1 cut(s) 1274
BstC8I GCNNGC 2 cut(s) 1419, 1638
BstDEI CTNAG 4 cut(s) 45, 290, 1113, 1552
BstF5I GGATG 2 cut(s) 907, 1322
BstHHI GCGC 1 cut(s) 97
BstMAI GTCTC 5 cut(s) 60, 149, 441, 1665, 1695
BstNI CCWGG 4 cut(s) 7, 105, 862, 1395
BstNSI RCATGY 1 cut(s) 1678
BstSCI CCNGG 4 cut(s) 5, 103, 860, 1393
BstSLI GKGCMC 1 cut(s) 1311
BstV2I GAAGAC 1 cut(s) 567
BstX2I RGATCY 3 cut(s) 269, 286, 523
BstXI CCANNNNNNTGG 4 cut(s) 239, 487, 665, 806
BstYI RGATCY 3 cut(s) 269, 286, 523
Bsu15I ATCGAT 1 cut(s) 386
BsuRI GGCC 5 cut(s) 479, 1164, 1265, 1342, 1748
BsuTUI ATCGAT 1 cut(s) 386
BtgZI GCGATG 1 cut(s) 1436
BtsCI GGATG 2 cut(s) 907, 1322
BtsI GCAGTG 1 cut(s) 844
BtsIMutI CAGTG 3 cut(s) 478, 844, 1150
Cac8I GCNNGC 2 cut(s) 1419, 1638
CfoI GCGC 1 cut(s) 97
Cfr10I RCCGGY 1 cut(s) 1164
Cfr13I GGNCC 5 cut(s) 243, 477, 548, 593, 643
ClaI ATCGAT 1 cut(s) 386
Csp6I GTAC 6 cut(s) 280, 891, 1026, 1346, 1391, 1684
CspCI CAANNNNNGTGG 2 cut(s) 1363, 1398
CviAII CATG 6 cut(s) 79, 164, 806, 883, 1245, 1675
CviQI GTAC 6 cut(s) 280, 891, 1026, 1346, 1391, 1684
DdeI CTNAG 4 cut(s) 45, 290, 1113, 1552
DraI TTTAAA 1 cut(s) 1209
DriI GACNNNNNGTC 1 cut(s) 1741
EaeI YGGCCR 2 cut(s) 1263, 1340
Eam1104I CTCTTC 3 cut(s) 33, 279, 1715
Eam1105I GACNNNNNGTC 1 cut(s) 1741
EarI CTCTTC 3 cut(s) 33, 279, 1715
Eco130I CCWWGG 1 cut(s) 1213
Eco47I GGWCC 4 cut(s) 243, 548, 593, 643
Eco57I CTGAAG 3 cut(s) 35, 260, 1562
Eco88I CYCGRG 1 cut(s) 259
EcoO109I RGGNCCY 1 cut(s) 243
EcoRII CCWGG 4 cut(s) 5, 103, 860, 1393
EcoT14I CCWWGG 1 cut(s) 1213
ErhI CCWWGG 1 cut(s) 1213
Esp3I CGTCTC 1 cut(s) 1695
FaeI CATG 6 cut(s) 82, 167, 809, 886, 1248, 1678
FalI AAGNNNNNCTT 2 cut(s) 1535, 1567
FaqI GGGAC 1 cut(s) 22
FatI CATG 6 cut(s) 78, 163, 805, 882, 1244, 1674
FauI CCCGC 1 cut(s) 149
FokI GGATG 2 cut(s) 914, 1329
FspBI CTAG 6 cut(s) 32, 284, 734, 743, 851, 1136
GlaI GCGC 1 cut(s) 96
GsuI CTGGAG 2 cut(s) 844, 1719
HaeIII GGCC 5 cut(s) 479, 1164, 1265, 1342, 1748
HapII CCGG 2 cut(s) 381, 1165
HhaI GCGC 1 cut(s) 97
Hin1II CATG 6 cut(s) 82, 167, 809, 886, 1248, 1678
Hin6I GCGC 1 cut(s) 95
HinP1I GCGC 1 cut(s) 95
HincII GTYRAC 2 cut(s) 1102, 1186
HindII GTYRAC 2 cut(s) 1102, 1186
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 6 cut(s) 35, 108, 142, 737, 965, 1057
HpaII CCGG 2 cut(s) 381, 1165
HphI GGTGA 5 cut(s) 370, 822, 1145, 1397, 1555
Hpy166II GTNNAC 3 cut(s) 351, 1102, 1186
Hpy188I TCNGA 4 cut(s) 223, 652, 1116, 1173
Hpy8I GTNNAC 3 cut(s) 351, 1102, 1186
HpyAV CCTTC 4 cut(s) 207, 446, 797, 1166
HpyCH4III ACNGT 4 cut(s) 136, 515, 1030, 1513
HpyCH4IV ACGT 3 cut(s) 1074, 1273, 1704
HpyCH4V TGCA 9 cut(s) 163, 372, 726, 837, 975, 1064, 1191, 1584, 1730
HpyF3I CTNAG 4 cut(s) 45, 290, 1113, 1552
HpySE526I ACGT 3 cut(s) 1074, 1273, 1704
Hsp92II CATG 6 cut(s) 82, 167, 809, 886, 1248, 1678
HspAI GCGC 1 cut(s) 95
LguI GCTCTTC 1 cut(s) 1715
LmnI GCTCC 1 cut(s) 1537
LweI GCATC 2 cut(s) 378, 1432
MaeI CTAG 6 cut(s) 32, 284, 734, 743, 851, 1136
MaeII ACGT 3 cut(s) 1074, 1273, 1704
MaeIII GTNAC 4 cut(s) 192, 440, 978, 1513
MboII GAAGA 6 cut(s) 20, 266, 567, 1448, 1552, 1732
MfeI CAATTG 1 cut(s) 416
MflI RGATCY 3 cut(s) 269, 286, 523
MhlI GDGCHC 2 cut(s) 1311, 1642
MlsI TGGCCA 2 cut(s) 1265, 1342
MluNI TGGCCA 2 cut(s) 1265, 1342
MlyI GAGTC 3 cut(s) 44, 151, 1066
MmeI TCCRAC 3 cut(s) 555, 819, 1677
Mox20I TGGCCA 2 cut(s) 1265, 1342
MroXI GAANNNNTTC 3 cut(s) 86, 869, 1239
MscI TGGCCA 2 cut(s) 1265, 1342
MseI TTAA 7 cut(s) 363, 695, 759, 912, 1043, 1127, 1208
MslI CAYNNNNRTG 3 cut(s) 237, 1243, 1679
Msp20I TGGCCA 2 cut(s) 1265, 1342
MspI CCGG 2 cut(s) 381, 1165
MspR9I CCNGG 4 cut(s) 7, 105, 862, 1395
MunI CAATTG 1 cut(s) 416
MvaI CCWGG 4 cut(s) 7, 105, 862, 1395
NlaIII CATG 6 cut(s) 82, 167, 809, 886, 1248, 1678
NlaIV GGNNCC 2 cut(s) 244, 478
NmeAIII GCCGAG 1 cut(s) 912
NmuCI GTSAC 1 cut(s) 978
NspI RCATGY 1 cut(s) 1678
PciI ACATGT 1 cut(s) 1674
PciSI GCTCTTC 1 cut(s) 1715
PdmI GAANNNNTTC 3 cut(s) 86, 869, 1239
PfeI GAWTC 3 cut(s) 108, 737, 965
PfoI TCCNGGA 2 cut(s) 103, 860
PleI GAGTC 3 cut(s) 43, 150, 1065
PpsI GAGTC 3 cut(s) 43, 150, 1065
Ppu21I YACGTR 1 cut(s) 1274
PpuMI RGGWCCY 1 cut(s) 243
PscI ACATGT 1 cut(s) 1674
PshBI ATTAAT 1 cut(s) 759
Psp5II RGGWCCY 1 cut(s) 243
Psp6I CCWGG 4 cut(s) 5, 103, 860, 1393
PspGI CCWGG 4 cut(s) 5, 103, 860, 1393
PspN4I GGNNCC 2 cut(s) 244, 478
PspPI GGNCC 5 cut(s) 243, 477, 548, 593, 643
PspPPI RGGWCCY 1 cut(s) 243
PsuI RGATCY 3 cut(s) 269, 286, 523
RsaI GTAC 6 cut(s) 281, 892, 1027, 1347, 1392, 1685
RsaNI GTAC 6 cut(s) 280, 891, 1026, 1346, 1391, 1684
RseI CAYNNNNRTG 3 cut(s) 237, 1243, 1679
SapI GCTCTTC 1 cut(s) 1715
SaqAI TTAA 7 cut(s) 363, 695, 759, 912, 1043, 1127, 1208
Sau96I GGNCC 5 cut(s) 243, 477, 548, 593, 643
ScaI AGTACT 1 cut(s) 1347
SchI GAGTC 3 cut(s) 44, 151, 1066
ScrFI CCNGG 4 cut(s) 7, 105, 862, 1395
SduI GDGCHC 2 cut(s) 1311, 1642
SfaNI GCATC 2 cut(s) 378, 1432
SinI GGWCC 4 cut(s) 243, 548, 593, 643
SmiMI CAYNNNNRTG 3 cut(s) 237, 1243, 1679
SmlI CTYRAG 3 cut(s) 19, 139, 989
SmoI CTYRAG 3 cut(s) 19, 139, 989
SsiI CCGC 1 cut(s) 156
SspMI CTAG 6 cut(s) 32, 284, 734, 743, 851, 1136
StyD4I CCNGG 4 cut(s) 5, 103, 860, 1393
StyI CCWWGG 1 cut(s) 1213
TaaI ACNGT 4 cut(s) 136, 515, 1030, 1513
TaiI ACGT 3 cut(s) 1077, 1276, 1707
TaqI TCGA 4 cut(s) 386, 431, 935, 1495
TatI WGTACW 2 cut(s) 1345, 1683
TfiI GAWTC 3 cut(s) 108, 737, 965
Tru1I TTAA 7 cut(s) 363, 695, 759, 912, 1043, 1127, 1208
Tru9I TTAA 7 cut(s) 363, 695, 759, 912, 1043, 1127, 1208
TscAI CASTG 3 cut(s) 478, 844, 1150
TseFI GTSAC 1 cut(s) 978
Tsp45I GTSAC 1 cut(s) 978
TspDTI ATGAA 4 cut(s) 95, 740, 779, 794
TspGWI ACGGA 2 cut(s) 453, 1611
TspRI CASTG 3 cut(s) 478, 844, 1150
VpaK11BI GGWCC 4 cut(s) 243, 548, 593, 643
VspI ATTAAT 1 cut(s) 759
XapI RAATTY 5 cut(s) 302, 322, 561, 1298, 1478
XbaI TCTAGA 4 cut(s) 31, 742, 850, 1135
XceI RCATGY 1 cut(s) 1678
XmnI GAANNNNTTC 3 cut(s) 86, 869, 1239
XspI CTAG 6 cut(s) 32, 284, 734, 743, 851, 1136
ZrmI AGTACT 1 cut(s) 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.