Rmu_sc0007641.1_g000001

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007641.1
OG0000047
Physical Location & Seq
Reverse (-)
10567 .. 13665
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007641.1_g000001.1.cds

Sequence Viewer

Length: 3099 bp
atgccaactctgttccaccatttcttccttttcttaatcactaccactgttatccccgcagttcacagcaactttattgaagcccagaaacaatcattgctccaattcaaacaaagtcttgaatttgattcttccgaatcctccaagcttatcacatggaattcgagcaccgactactgtttttggctcggtgtaacttgcagcaccaatgggcgtgttgtcggacttgacctcagcggagagtatttctcatgcaccattggcgattccagcagtcttttccaacttgaacatcttcagagcctcaatttggcctataacgacttcagtcactctgcaattccatctgcaattggcaagctttcaaatttgaggtatttgaatttaagtcaagcttatttttatgggcaaattcccattgaggttgcacgcttgaaaaggttggtagttctggatctctttacatataactcggatgaggatcagttaaaacttgagaacccgaatttaggaactttaatccaaaaccttacagagcttacagagttaaatcttggtcatataaacctatcagctgagggatctcactggagccaaacaatatcatcgtcacttccaaagctgagggtgttgaccttgtccaattgtgatctttcaggccctattcatgaatcctttgccaggcttcattctctatccacgttaatcttggataacaactacatctctgctccatttccaaaattctttgccaatttttctcgtttgatttccttgagtctctcttcttgtcacttttatggaacatttcccaaagagatattccaggtacctacactacagtctgttgacctatatggtaattcagagctttgtggttccttaccagagtttccaaagaatggatctctcgaatccctagttctatccctgactaagttttcaggagtcttgccggactctatttgcaaccttaaaatgctgtctaaattagatcttggaggttgcaatttcacaggagcaattccaaagtcactggcaaacctaacacaattggggcatttggacttgtcttacaataagttttctagttcgattaattctattcaatgggacaaactcatcaagcttgagtttctcgacttgggcaacaatatactctacgggagtattccattatctcccttttctattcccttcctgcagaggttggcactttatgaaaatcacttatctggtcagttgcttgaattttctaatgtctcttcgtacgtgctggacgaacttgatttgagttgcaacaatttggaaggatcaatacccgtgtctatctttaatcttccaatgcttcaagagtttaatctttcttcaaacaacttgagtggttttcctttttatggccttcaggagtcgagaaatctttctactcttgatctatccttcaatagcctgttgttcaatcacaatggtaccaactcatcaccgccctccctccatattcagcatttgtatttggcttctaacgaattgaaaacattcccaaatttcttgaaaaatcaatcttatttaaccttattggacctttcatacaaccagattccaggtcagatacccaattggatttggggacatcctcttgcaaatctatatctatgttgtaacaagttggtaagtctacaagctcctttacttggttctacttacaatctgattgatattgatcttcactcaaaccagcttcagggacaaataccattgtttgtaagtggtgcttatttggattactcaagaaataatttcagctctagtataccaactgacattggtgatttcctttctttcattagctacttttctctatcaagcagtaacttgtatggagaaattccaaaatcaatatgcaatgcaagtggtgcaattcttgatctctcgaataactctttgagtggaatcattccccagtgcttgactcagacatcttctctttctgtccttgatttgaggagaaacaaccttactggatctatccccaatacttttcttgaaggttgtaagttgcaaactctagctctgagcagaaatcagatacaaggtcaatttccaaaatctctagccaattgttcaagcttagaggttttagaccttggaatcaatcaaataacagatgcatttccctgcctgttgaagaccatatccaccttgtgtgtccttgtgttgcgatccaacaaattttatggacttattggttgtcccgagaccaaaggcacctggccgaagcttcaaatcatagacttagctcataacagtttcaatggtgaaataccaggtacatcattgacaacatggcaggcaatgattgttaatgaagatggttacgaagatcaccttcgctattcttttcatgatgttgcaacctatgaagatgcagtgacaactacaagcaaaggtctagagatcgatcttgtaaagattttaactatcttcactttgattgacttctcagctaacaagttcaatggaacaatacccaaggaaatgggccaactgagattattatatgtcctcaatctgtccagtaatgctttcacaggcgaaatcccatcatcctttggtaacatgagaagcatagagtccttagacctctcacagaacctcctgagcggccaaattccaccgcagcttgcaactctcactttcctttcgtggttgaatgtctcatataatcaactgactggaaggatcccaaccagcactcagttttcgacatttccaaatacctcattcgagggtaacaaaggattatgggggcctcctctgacatcggatacagcaatcgtattgccacctccaaggtttaatggaagctcaagtaatctgaattctggagatgagattgattggaatgttatcagtgttgaaattggatttacatgtgggtttggaattgccgtcgggtcacttttgttttgcaagagatggaggaaatggtactacagagcaatgtttaaaatcctgttcaagatattccctcagctggaacacagatttggtaatcacagaaggcatgtttacataaatcaaaggtactggacacgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1032

Amino Acids

115.04

Weight (kDa)

5.76

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 829, 1469
AccB1I GGYRCC 3 cut(s) 829, 1469, 2264
AccB7I CCANNNNNTGG 1 cut(s) 902
AccBSI CCGCTC 1 cut(s) 2661
AccI GTMKAC 2 cut(s) 1675, 1810
AciI CCGC 5 cut(s) 57, 237, 1484, 2661, 2675
AclWI GGATC 9 cut(s) 462, 489, 589, 913, 1321, 2029, 2214, 2734, 2747
AcoI YGGCCR 2 cut(s) 2270, 2662
AcuI CTGAAG 4 cut(s) 281, 310, 1388, 1724
AdeI CACNNNGTG 1 cut(s) 2202
AfaI GTAC 6 cut(s) 831, 1271, 1471, 2329, 2990, 3086
AfiI CCNNNNNNNGG 8 cut(s) 310, 509, 681, 902, 1397, 1691, 1741, 3034
AflIII ACRYGT 2 cut(s) 2930, 3092
AjnI CCWGG 5 cut(s) 680, 825, 1600, 2267, 2323
AjuI GAANNNNNNNTTGG 4 cut(s) 806, 838, 3030, 3062
Alw21I GWGCWC 1 cut(s) 170
Alw26I GTCTC 4 cut(s) 785, 1267, 2249, 2719
AlwI GGATC 9 cut(s) 462, 489, 589, 913, 1321, 2029, 2214, 2734, 2747
Ama87I CYCGRG 1 cut(s) 2252
AoxI GGCC 7 cut(s) 312, 658, 1399, 2270, 2539, 2662, 2807
ApeKI GCWGC 2 cut(s) 201, 2677
AseI ATTAAT 1 cut(s) 1098
Asp700I GAANNNNTTC 3 cut(s) 294, 1420, 1535
Asp718I GGTACC 2 cut(s) 829, 1469
AspS9I GGNCC 4 cut(s) 659, 1579, 2539, 2807
AsuHPI GGTGA 4 cut(s) 1473, 1838, 2327, 2375
AvaI CYCGRG 1 cut(s) 2252
AvaII GGWCC 1 cut(s) 1579
BaeI ACNNNNGTAYC 2 cut(s) 1453, 1486
BamHI GGATCC 1 cut(s) 2739
BanI GGYRCC 3 cut(s) 829, 1469, 2264
BarI GAAGNNNNNNTAC 2 cut(s) 1302, 1334
BbsI GAAGAC 1 cut(s) 2192
Bbv12I GWGCWC 1 cut(s) 170
BbvCI CCTCAGC 4 cut(s) 233, 576, 623, 3030
BbvI GCAGC 2 cut(s) 213, 2689
BccI CCATC 4 cut(s) 352, 2363, 2608, 2970
BceAI ACGGC 1 cut(s) 2933
BciT130I CCWGG 5 cut(s) 682, 827, 1602, 2269, 2325
BciVI GTATCC 1 cut(s) 2818
BcoDI GTCTC 4 cut(s) 785, 1267, 2249, 2719
BfaI CTAG 6 cut(s) 920, 1089, 1806, 2066, 2111, 2450
BfmI CTRYAG 3 cut(s) 839, 1202, 2992
BfuI GTATCC 1 cut(s) 2818
BglII AGATCT 1 cut(s) 994
BisI GCNGC 3 cut(s) 202, 2662, 2678
BlsI GCNGC 3 cut(s) 203, 2663, 2679
Bme1390I CCNGG 5 cut(s) 682, 827, 1602, 2269, 2325
Bme18I GGWCC 1 cut(s) 1579
BmeT110I CYCGRG 1 cut(s) 2252
BmgT120I GGNCC 4 cut(s) 659, 1579, 2539, 2807
BmiI GGNNCC 7 cut(s) 593, 831, 880, 1471, 2266, 2741, 2808
BmrFI CCNGG 5 cut(s) 682, 827, 1602, 2269, 2325
BmrI ACTGGG 1 cut(s) 1954
BmsI GCATC 2 cut(s) 2155, 2413
BmuI ACTGGG 1 cut(s) 1954
BoxI GACNNNNGTC 1 cut(s) 327
BpiI GAAGAC 1 cut(s) 2192
BplI GAGNNNNNCTC 2 cut(s) 233, 265
BpmI CTGGAG 2 cut(s) 610, 2904
Bpu10I CCTNAGC 5 cut(s) 233, 576, 623, 2657, 3030
BpuEI CTTGAG 6 cut(s) 515, 796, 1151, 1399, 1771, 2851
Bsa29I ATCGAT 1 cut(s) 2457
BsaAI YACGTR 1 cut(s) 1273
BsaBI GATNNNNATC 2 cut(s) 480, 1719
BsaI GGTCTC 1 cut(s) 2249
BsaJI CCNNGG 3 cut(s) 2143, 2529, 2849
BsaXI ACNNNNNCTCC 2 cut(s) 2637, 2667
Bsc4I CCNNNNNNNGG 8 cut(s) 310, 509, 681, 902, 1397, 1691, 1741, 3034
Bse1I ACTGG 7 cut(s) 593, 1041, 1960, 2023, 2574, 2737, 3092
Bse3DI GCAATG 4 cut(s) 95, 1909, 2358, 3006
Bse8I GATNNNNATC 2 cut(s) 480, 1719
BseBI CCWGG 5 cut(s) 682, 827, 1602, 2269, 2325
BseCI ATCGAT 1 cut(s) 2457
BseDI CCNNGG 3 cut(s) 2143, 2529, 2849
BseGI GGATG 3 cut(s) 481, 1630, 2603
BseJI GATNNNNATC 2 cut(s) 480, 1719
BseLI CCNNNNNNNGG 8 cut(s) 310, 509, 681, 902, 1397, 1691, 1741, 3034
BseMI GCAATG 4 cut(s) 95, 1909, 2358, 3006
BseNI ACTGG 7 cut(s) 593, 1041, 1960, 2023, 2574, 2737, 3092
BseRI GAGGAG 2 cut(s) 2017, 2802
BseXI GCAGC 2 cut(s) 213, 2689
BshFI GGCC 7 cut(s) 314, 660, 1401, 2272, 2541, 2664, 2809
BshNI GGYRCC 3 cut(s) 829, 1469, 2264
BshVI ATCGAT 1 cut(s) 2457
BsiHKAI GWGCWC 1 cut(s) 170
BsiHKCI CYCGRG 1 cut(s) 2252
BsiSI CCGG 1 cut(s) 956
BsiWI CGTACG 1 cut(s) 1269
BslFI GGGAC 4 cut(s) 1127, 1641, 1758, 2235
BslI CCNNNNNNNGG 8 cut(s) 310, 509, 681, 902, 1397, 1691, 1741, 3034
BsmAI GTCTC 4 cut(s) 785, 1267, 2249, 2719
BsmFI GGGAC 4 cut(s) 1127, 1641, 1758, 2235
BsnI GGCC 7 cut(s) 314, 660, 1401, 2272, 2541, 2664, 2809
Bso31I GGTCTC 1 cut(s) 2249
BsoBI CYCGRG 1 cut(s) 2252
Bsp1286I GDGCHC 1 cut(s) 170
BspACI CCGC 5 cut(s) 57, 237, 1484, 2661, 2675
BspANI GGCC 7 cut(s) 314, 660, 1401, 2272, 2541, 2664, 2809
BspDI ATCGAT 1 cut(s) 2457
BspHI TCATGA 2 cut(s) 667, 2401
BspLI GGNNCC 7 cut(s) 593, 831, 880, 1471, 2266, 2741, 2808
BspMAI CTGCAG 1 cut(s) 1206
BspPI GGATC 9 cut(s) 462, 489, 589, 913, 1321, 2029, 2214, 2734, 2747
BspT107I GGYRCC 3 cut(s) 829, 1469, 2264
BspTNI GGTCTC 1 cut(s) 2249
BsrBI CCGCTC 1 cut(s) 2661
BsrDI GCAATG 4 cut(s) 95, 1909, 2358, 3006
BsrI ACTGG 7 cut(s) 593, 1041, 1960, 2023, 2574, 2737, 3092
BssECI CCNNGG 3 cut(s) 2143, 2529, 2849
BssNAI GTATAC 1 cut(s) 1811
BssT1I CCWWGG 3 cut(s) 2143, 2529, 2849
Bst1107I GTATAC 1 cut(s) 1811
Bst2UI CCWGG 5 cut(s) 682, 827, 1602, 2269, 2325
Bst4CI ACNGT 4 cut(s) 49, 179, 843, 2306
Bst6I CTCTTC 2 cut(s) 790, 1270
BstAPI GCANNNNNTGC 1 cut(s) 1913
BstBAI YACGTR 1 cut(s) 1273
BstC8I GCNNGC 4 cut(s) 359, 430, 2349, 2682
BstENI CCTNNNNNAGG 1 cut(s) 679
BstF5I GGATG 3 cut(s) 481, 1630, 2603
BstMAI GTCTC 4 cut(s) 785, 1267, 2249, 2719
BstMWI GCNNNNNNNGC 3 cut(s) 261, 270, 1913
BstNI CCWGG 5 cut(s) 682, 827, 1602, 2269, 2325
BstNSI RCATGY 2 cut(s) 2934, 3068
BstPAI GACNNNNGTC 1 cut(s) 327
BstSCI CCNGG 5 cut(s) 680, 825, 1600, 2267, 2323
BstSFI CTRYAG 3 cut(s) 839, 1202, 2992
BstV1I GCAGC 2 cut(s) 213, 2689
BstV2I GAAGAC 1 cut(s) 2192
BstX2I RGATCY 6 cut(s) 454, 581, 905, 994, 2021, 2739
BstXI CCANNNNNNTGG 1 cut(s) 2536
BstYI RGATCY 6 cut(s) 454, 581, 905, 994, 2021, 2739
BstZ17I GTATAC 1 cut(s) 1811
Bsu15I ATCGAT 1 cut(s) 2457
BsuI GTATCC 1 cut(s) 2818
BsuRI GGCC 7 cut(s) 314, 660, 1401, 2272, 2541, 2664, 2809
BsuTUI ATCGAT 1 cut(s) 2457
BtsCI GGATG 3 cut(s) 481, 1630, 2603
BtsI GCAGTG 1 cut(s) 2433
BtsIMutI CAGTG 6 cut(s) 45, 586, 1034, 1967, 2433, 2917
Cac8I GCNNGC 4 cut(s) 359, 430, 2349, 2682
CciI TCATGA 2 cut(s) 667, 2401
Cfr13I GGNCC 4 cut(s) 659, 1579, 2539, 2807
ClaI ATCGAT 1 cut(s) 2457
CsiI ACCWGGT 1 cut(s) 2323
Csp6I GTAC 6 cut(s) 830, 1270, 1470, 2328, 2989, 3085
CspCI CAANNNNNGTGG 4 cut(s) 1363, 1398, 1891, 1926
CviAII CATG 8 cut(s) 156, 252, 668, 2343, 2402, 2617, 2931, 3065
CviQI GTAC 6 cut(s) 830, 1270, 1470, 2328, 2989, 3085
DraI TTTAAA 1 cut(s) 3007
DraIII CACNNNGTG 1 cut(s) 2202
EaeI YGGCCR 2 cut(s) 2270, 2662
Eam1104I CTCTTC 2 cut(s) 790, 1270
EarI CTCTTC 2 cut(s) 790, 1270
Eco130I CCWWGG 3 cut(s) 2143, 2529, 2849
Eco31I GGTCTC 1 cut(s) 2249
Eco47I GGWCC 1 cut(s) 1579
Eco57I CTGAAG 4 cut(s) 281, 310, 1388, 1724
Eco88I CYCGRG 1 cut(s) 2252
EcoNI CCTNNNNNAGG 1 cut(s) 679
EcoO109I RGGNCCY 2 cut(s) 659, 2807
EcoRI GAATTC 2 cut(s) 160, 2878
EcoRII CCWGG 5 cut(s) 680, 825, 1600, 2267, 2323
EcoT14I CCWWGG 3 cut(s) 2143, 2529, 2849
EcoT22I ATGCAT 1 cut(s) 2170
ErhI CCWWGG 3 cut(s) 2143, 2529, 2849
FaeI CATG 8 cut(s) 159, 255, 671, 2346, 2405, 2620, 2934, 3068
FalI AAGNNNNNCTT 6 cut(s) 379, 411, 1756, 1788, 2370, 2402
FaqI GGGAC 4 cut(s) 1127, 1641, 1758, 2235
FatI CATG 8 cut(s) 155, 251, 667, 2342, 2401, 2616, 2930, 3064
FauI CCCGC 1 cut(s) 64
FblI GTMKAC 2 cut(s) 1675, 1810
Fnu4HI GCNGC 3 cut(s) 202, 2662, 2678
FokI GGATG 3 cut(s) 488, 1617, 2590
Fsp4HI GCNGC 3 cut(s) 202, 2662, 2678
FspBI CTAG 6 cut(s) 920, 1089, 1806, 2066, 2111, 2450
GluI GCNGC 3 cut(s) 202, 2662, 2678
GsuI CTGGAG 2 cut(s) 610, 2904
HaeIII GGCC 7 cut(s) 314, 660, 1401, 2272, 2541, 2664, 2809
HapII CCGG 1 cut(s) 956
Hin1II CATG 8 cut(s) 159, 255, 671, 2346, 2405, 2620, 2934, 3068
HincII GTYRAC 2 cut(s) 633, 850
HindII GTYRAC 2 cut(s) 633, 850
HindIII AAGCTT 6 cut(s) 146, 359, 393, 1127, 2125, 2276
HpaII CCGG 1 cut(s) 956
HphI GGTGA 4 cut(s) 1473, 1838, 2327, 2375
Hpy166II GTNNAC 6 cut(s) 64, 633, 850, 1676, 1811, 3070
Hpy8I GTNNAC 6 cut(s) 64, 633, 850, 1676, 1811, 3070
Hpy99I CGWCG 1 cut(s) 2954
HpyAV CCTTC 8 cut(s) 1207, 1304, 1412, 1450, 2039, 2396, 2730, 3054
HpyCH4III ACNGT 4 cut(s) 49, 179, 843, 2306
HpyCH4IV ACGT 3 cut(s) 701, 1272, 3094
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 270, 1913
HpySE526I ACGT 3 cut(s) 701, 1272, 3094
Hsp92II CATG 8 cut(s) 159, 255, 671, 2346, 2405, 2620, 2934, 3068
KpnI GGTACC 2 cut(s) 833, 1473
LmnI GCTCC 5 cut(s) 105, 591, 736, 1019, 1687
Lsp1109I GCAGC 2 cut(s) 213, 2689
LweI GCATC 2 cut(s) 2155, 2413
MabI ACCWGGT 1 cut(s) 2323
MaeI CTAG 6 cut(s) 920, 1089, 1806, 2066, 2111, 2450
MaeII ACGT 3 cut(s) 701, 1272, 3094
MbiI CCGCTC 1 cut(s) 2661
MfeI CAATTG 5 cut(s) 351, 643, 1052, 1615, 2116
MflI RGATCY 6 cut(s) 454, 581, 905, 994, 2021, 2739
MhlI GDGCHC 1 cut(s) 170
MlyI GAGTC 6 cut(s) 787, 953, 957, 1418, 1963, 2639
MmeI TCCRAC 3 cut(s) 202, 307, 2247
Mph1103I ATGCAT 1 cut(s) 2170
MroXI GAANNNNTTC 3 cut(s) 294, 1420, 1535
MslI CAYNNNNRTG 1 cut(s) 798
MspA1I CMGCKG 3 cut(s) 237, 575, 3034
MspI CCGG 1 cut(s) 956
MspR9I CCNGG 5 cut(s) 682, 827, 1602, 2269, 2325
MunI CAATTG 5 cut(s) 351, 643, 1052, 1615, 2116
MvaI CCWGG 5 cut(s) 682, 827, 1602, 2269, 2325
MwoI GCNNNNNNNGC 3 cut(s) 261, 270, 1913
NlaIII CATG 8 cut(s) 159, 255, 671, 2346, 2405, 2620, 2934, 3068
NlaIV GGNNCC 7 cut(s) 593, 831, 880, 1471, 2266, 2741, 2808
NmuCI GTSAC 6 cut(s) 329, 609, 791, 1032, 2428, 2955
NsiI ATGCAT 1 cut(s) 2170
NspI RCATGY 2 cut(s) 2934, 3068
PagI TCATGA 2 cut(s) 667, 2401
PciI ACATGT 1 cut(s) 2930
PcsI WCGNNNNNNNCGW 1 cut(s) 1278
PdmI GAANNNNTTC 3 cut(s) 294, 1420, 1535
PfeI GAWTC 8 cut(s) 128, 137, 266, 671, 914, 1597, 1950, 2148
Pfl23II CGTACG 1 cut(s) 1269
PflFI GACNNNGTC 1 cut(s) 637
PflMI CCANNNNNTGG 1 cut(s) 902
PkrI GCNGC 3 cut(s) 203, 2663, 2679
PleI GAGTC 6 cut(s) 786, 953, 956, 1417, 1963, 2638
PpsI GAGTC 6 cut(s) 786, 953, 956, 1417, 1963, 2638
Ppu21I YACGTR 1 cut(s) 1273
PscI ACATGT 1 cut(s) 2930
PshAI GACNNNNGTC 1 cut(s) 327
PshBI ATTAAT 1 cut(s) 1098
Psp6I CCWGG 5 cut(s) 680, 825, 1600, 2267, 2323
PspGI CCWGG 5 cut(s) 680, 825, 1600, 2267, 2323
PspLI CGTACG 1 cut(s) 1269
PspN4I GGNNCC 7 cut(s) 593, 831, 880, 1471, 2266, 2741, 2808
PspPI GGNCC 4 cut(s) 659, 1579, 2539, 2807
PstI CTGCAG 1 cut(s) 1206
PsuI RGATCY 6 cut(s) 454, 581, 905, 994, 2021, 2739
PsyI GACNNNGTC 1 cut(s) 637
PvuII CAGCTG 2 cut(s) 575, 3034
RsaI GTAC 6 cut(s) 831, 1271, 1471, 2329, 2990, 3086
RsaNI GTAC 6 cut(s) 830, 1270, 1470, 2328, 2989, 3085
RseI CAYNNNNRTG 1 cut(s) 798
SatI GCNGC 3 cut(s) 202, 2662, 2678
Sau96I GGNCC 4 cut(s) 659, 1579, 2539, 2807
SchI GAGTC 6 cut(s) 787, 953, 957, 1418, 1963, 2639
ScrFI CCNGG 5 cut(s) 682, 827, 1602, 2269, 2325
SduI GDGCHC 1 cut(s) 170
SexAI ACCWGGT 1 cut(s) 2323
SfaNI GCATC 2 cut(s) 2155, 2413
SfcI CTRYAG 3 cut(s) 839, 1202, 2992
SinI GGWCC 1 cut(s) 1579
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 6 cut(s) 494, 775, 1130, 1378, 1786, 2866
SmoI CTYRAG 6 cut(s) 494, 775, 1130, 1378, 1786, 2866
SsiI CCGC 5 cut(s) 57, 237, 1484, 2661, 2675
SspMI CTAG 6 cut(s) 920, 1089, 1806, 2066, 2111, 2450
StyD4I CCNGG 5 cut(s) 680, 825, 1600, 2267, 2323
StyI CCWWGG 3 cut(s) 2143, 2529, 2849
TaaI ACNGT 4 cut(s) 49, 179, 843, 2306
TaiI ACGT 3 cut(s) 704, 1275, 3097
TaqI TCGA 9 cut(s) 164, 912, 1094, 1140, 1412, 1931, 2457, 2762, 2784
TauI GCSGC 1 cut(s) 2664
TfiI GAWTC 8 cut(s) 128, 137, 266, 671, 914, 1597, 1950, 2148
TscAI CASTG 6 cut(s) 52, 593, 1041, 1967, 2433, 2917
TseFI GTSAC 6 cut(s) 329, 609, 791, 1032, 2428, 2955
TseI GCWGC 2 cut(s) 201, 2677
Tsp45I GTSAC 6 cut(s) 329, 609, 791, 1032, 2428, 2955
TspDTI ATGAA 9 cut(s) 656, 677, 684, 1236, 1575, 1831, 2379, 2390, 2433
TspRI CASTG 6 cut(s) 52, 593, 1041, 1967, 2433, 2917
Tth111I GACNNNGTC 1 cut(s) 637
Van91I CCANNNNNTGG 1 cut(s) 902
VpaK11BI GGWCC 1 cut(s) 1579
VspI ATTAAT 1 cut(s) 1098
XagI CCTNNNNNAGG 1 cut(s) 679
XbaI TCTAGA 1 cut(s) 2449
XceI RCATGY 2 cut(s) 2934, 3068
XcmI CCANNNNNNNNNTGG 1 cut(s) 706
XmiI GTMKAC 2 cut(s) 1675, 1810
XmnI GAANNNNTTC 3 cut(s) 294, 1420, 1535
XspI CTAG 6 cut(s) 920, 1089, 1806, 2066, 2111, 2450
Zsp2I ATGCAT 1 cut(s) 2170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.