MD05G1095600.v1.1

receptor-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
20167279 .. 20169771
2493 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1095600.v1.1.491

Sequence Viewer

Length: 2493 bp
ATGAAACCTCTCTTCCCACTCCCATATTTCTTCCTCATGTTCTTCATTATCACCAATACTTTCTGTGTTAACATTGCGGCTGCAGTCCGTGGTCGGTGTTTCGAAGACCAGCAATTGCTCCATCTGAAGAAAAGCCTCACCTTTGCTCCCGAGTCATCTGAGCATCCTGCTTCATCCAAGTTTATATCATGGAATTCAAGTACCGACTGCTGTTCTTGGGCTGGTGTTACTTGCAATACCAACGGCAGCGTTGTTGGTCTTGACATTAGTAGCAAAAACATCTCCGGTGGCATTGACAACTCGAGCACTCTCTTCCATCTTCAACATCTTCAAAGCCTTAACTTGGCTGATAACTCTTTTGTTAACGGCTCTCGCATTCCATCATCAATCGGAAAGCTTACCAACTTGAGGTATCTAAACTTATCTGATTCTGGTTATTCCGGAAAGATTCCCATTGAGATTTCACGCTTGACAAAGTTGGTTGTCCTAGATATTTCTCTATGTAAACATCAGTGTGCCACCAAACTTGAGAGCCCAAATTTGAGCATGCTCTTTCAGAACCTCACAGAGATTACAGAGCTATATCTTGATGGGATAAATATATCAGCACAGGGGAGTCAGTGGTGCCAAGCAATATCATCTTCACTCCCAAATCTGAGGGTGTTGAGCATGTGTGGAAGCCAGCTCTCAGGTCCTTTTTGTCAGTCCCTCGCAAAACTTCGGTCTCTCTCGGTGATTCAATTGGATAGTAATGACATCTACGGTCCAATTCCAGGATTCTTTCCCAAGTTGACTTCTTTGAGTCTTCGTAATTGCATTCTGAATGGAACATTTCCCAAAGAGATCTTTCAGGTACCTACTTTACAAGCTATTGACCTTTCCGGTAACATACATCTTCATGGTTCTTTTCCAGAATTTCTTGAGAATGCATCTCTTGGATTTTTGGACCTAAGCCACACAAAGTTTTCAGGGTTATTGCCCGACTCCATCAGCAACCTCAAATTGTTGTCCATTTTAAATCTTTATAACTGCAGTTTTAGTGGATCAATCCCTAAGTCCATGGCAAGCCTAACAAAATTGTTTTACTTGGACATGTCGTCAAATATGTTTAATGGTTCGATTGATTCTATTTACTGGAAAAAGCTTGTAAATCTCGAATATTTAGCGTTGGATTCAAATTTCCTCACAGGTAGTATTCCGTCATCTCTCTTTTCTTCTTCCTCCTTGTTGCAACTGACACTTTCTCACAATCGATTCTCTGGTCTACTCCATGAAATTTCCACAGTTGACTCCTCCACATTATTTAACCTTGATTTGTCTTTTAATTCTCTGAGTGGTATGATTCCCCAAAGCTTGTCTGCAATGAGCCGCCTTCAAGTGCTTAACTTGAGGAGAAACAACCTTACTGGAAGTATTTCTGATTTCGAATTTCCTGAAAGTTTAGAGTTTCTAGAACTCAATCAGAATCAGATACATGGTCAATTTCCAAAGTCTCTAGCCCAATGCAGTGAATTACAGGTTGTAAACCTTGAAAACAACCAAATAACAGATACCTTCCCATGCTTGTTGAGGAACATCTCCTCCTTGCATGTCCTTGCTTTGCGGTCCAACAAATTTTATGGACGCATTGGATGTCCTGAGGAGACTAATGGAATATGGCCAATGCTTCAGATCATAGACATAGCTCACAACAATTTTCATGGCGAAATACCAGGATCGTATTTGAAGGACTGGCAGGCAATGATAAATAACGAAGATGATAACCCGTCAACAATCCGCCTGCTTCCGTTTGAAGATCCTGGAGTGATTCATTATCAGGAGACAATAACAGTAGTAAGCAAAGGTTTGGAAATCGAACTGGTAAAGATTCTAACTATCTTCACCTCCATTGACTTCTCTTGCAACAATTTGAGTGGACCAATACCTAAGGAAATGGGAGAACTCAAATCATTATATTTGCTCAACTTGTCGAGCAATGCTTTTACTGGTGAAATCCCATCGTCATTTGGCAACATGCGACAACTCGAGTCCTTAGACCTGTCGCAAAACAAGCTGAGTGGGGAAATTCCACCACAGTTGGCAAAGCTTAATTTCCTTTCATTCTTGAACCTCTCAAATAATCAATTGGTTGGCAGGATCCCAACCGGTCCTCAGTTTTCAACATTTACAAGTGCCTCCTTTACAGGTAACAAAGGATTATGGGGGCTTCCTTTGATAGTAGATAGCAAAGCAGTATTATTGTCATCACCACCAACATTGACTGGGAGTGTTCTGAGTTATAGACATGAGATTGATTGGGATCTTATCAGTGTCGAAATTGGATTTGTATGTGGCTTTGGAGTTGCGGTCGGGTCACTTGTGTTGTGCAAGAGGTGGAGTAAATGGTATTACAAAACAATGTATAAAATCCTTGTTAAGATATTCCCTCAGCTTGAAGATAGAATTGGTCGTCACCGAAGACATGTCCACATAAATCAAAGGTTGGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

831

Amino Acids

92.07

Weight (kDa)

6.56

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 79 2.1e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 310 - 388 5.8e-06 Leucine-rich repeat region
LRR_8 PF13855 434 - 491 2.1e-07 Leucine rich repeat
LRR_8 PF13855 650 - 709 4.2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1026
Acc65I GGTACC 1 cut(s) 853
AccB1I GGYRCC 2 cut(s) 624, 853
AccI GTMKAC 1 cut(s) 1264
AccIII TCCGGA 1 cut(s) 440
AciI CCGC 5 cut(s) 77, 1369, 1603, 1777, 2345
AclWI GGATC 6 cut(s) 1051, 1723, 1790, 2131, 2144, 2307
AcoI YGGCCR 1 cut(s) 1658
AcsI RAATTY 8 cut(s) 193, 538, 914, 1177, 1275, 1427, 1613, 2064
AcuI CTGAAG 2 cut(s) 146, 1652
AfaI GTAC 2 cut(s) 202, 855
AfiI CCNNNNNNNGG 3 cut(s) 343, 408, 773
AflIII ACRYGT 2 cut(s) 1092, 2461
AgeI ACCGGT 1 cut(s) 2144
AhdI GACNNNNNGTC 1 cut(s) 1096
AjnI CCWGG 3 cut(s) 772, 1711, 1798
AjuI GAANNNNNNNTTGG 2 cut(s) 2427, 2459
AloI GAACNNNNNNTCC 2 cut(s) 1565, 1597
Alw21I GWGCWC 1 cut(s) 308
Alw26I GTCTC 4 cut(s) 729, 1497, 1637, 1814
AlwI GGATC 6 cut(s) 1051, 1723, 1790, 2131, 2144, 2307
Ama87I CYCGRG 3 cut(s) 149, 301, 2024
Aor13HI TCCGGA 1 cut(s) 440
AoxI GGCC 1 cut(s) 1658
ApeKI GCWGC 2 cut(s) 80, 246
ApoI RAATTY 8 cut(s) 193, 538, 914, 1177, 1275, 1427, 1613, 2064
ArsI GACNNNNNNTTYG 2 cut(s) 707, 739
AsiGI ACCGGT 1 cut(s) 2144
Asp700I GAANNNNTTC 1 cut(s) 1414
Asp718I GGTACC 1 cut(s) 853
AspS9I GGNCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
AsuHPI GGTGA 7 cut(s) 43, 130, 745, 1873, 2000, 2238, 2444
AsuII TTCGAA 2 cut(s) 102, 1425
AvaI CYCGRG 3 cut(s) 149, 301, 2024
AvaII GGWCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
AxyI CCTNAGG 2 cut(s) 1638, 1926
BalI TGGCCA 1 cut(s) 1660
BamHI GGATCC 1 cut(s) 2136
BanI GGYRCC 2 cut(s) 624, 853
BanII GRGCYC 1 cut(s) 536
BbsI GAAGAC 3 cut(s) 111, 797, 2464
Bbv12I GWGCWC 1 cut(s) 308
BbvCI CCTCAGC 1 cut(s) 2427
BbvI GCAGC 2 cut(s) 67, 258
BccI CCATC 6 cut(s) 129, 324, 388, 584, 995, 2005
BceAI ACGGC 2 cut(s) 259, 382
BciT130I CCWGG 3 cut(s) 774, 1713, 1800
BcoDI GTCTC 4 cut(s) 729, 1497, 1637, 1814
BfaI CTAG 3 cut(s) 488, 1451, 1496
BfmI CTRYAG 2 cut(s) 81, 1030
BglII AGATCT 1 cut(s) 843
BisI GCNGC 4 cut(s) 78, 81, 247, 1369
BlsI GCNGC 4 cut(s) 79, 82, 248, 1370
Bme1390I CCNGG 3 cut(s) 774, 1713, 1800
Bme18I GGWCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
BmeRI GACNNNNNGTC 1 cut(s) 1096
BmeT110I CYCGRG 3 cut(s) 149, 301, 2024
BmgT120I GGNCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
BmiI GGNNCC 3 cut(s) 626, 855, 2138
BmrFI CCNGG 3 cut(s) 774, 1713, 1800
BmrI ACTGGG 1 cut(s) 2271
BmsI GCATC 2 cut(s) 172, 938
BmuI ACTGGG 1 cut(s) 2271
BpiI GAAGAC 3 cut(s) 111, 797, 2464
BpmI CTGGAG 1 cut(s) 1821
Bpu10I CCTNAGC 2 cut(s) 950, 2427
Bpu14I TTCGAA 2 cut(s) 102, 1425
BpuEI CTTGAG 4 cut(s) 427, 548, 941, 1408
Bsa29I ATCGAT 1 cut(s) 1252
BsaBI GATNNNNATC 1 cut(s) 2298
BsaI GGTCTC 1 cut(s) 729
BsaJI CCNNGG 2 cut(s) 88, 1059
BsaWI WCCGGW 4 cut(s) 284, 440, 881, 2144
BsaXI ACNNNNNCTCC 6 cut(s) 130, 160, 1565, 1595, 2331, 2361
Bsc4I CCNNNNNNNGG 3 cut(s) 343, 408, 773
Bse118I RCCGGY 1 cut(s) 2144
Bse1I ACTGG 6 cut(s) 1139, 1411, 1736, 1863, 1990, 2266
Bse21I CCTNAGG 2 cut(s) 1638, 1926
Bse3DI GCAATG 4 cut(s) 72, 1368, 1746, 1981
Bse8I GATNNNNATC 1 cut(s) 2298
BseAI TCCGGA 1 cut(s) 440
BseBI CCWGG 3 cut(s) 774, 1713, 1800
BseCI ATCGAT 1 cut(s) 1252
BseDI CCNNGG 2 cut(s) 88, 1059
BseGI GGATG 3 cut(s) 163, 173, 1637
BseJI GATNNNNATC 1 cut(s) 2298
BseLI CCNNNNNNNGG 3 cut(s) 343, 408, 773
BseMI GCAATG 4 cut(s) 72, 1368, 1746, 1981
BseMII CTCAG 9 cut(s) 150, 647, 702, 1322, 1629, 2045, 2165, 2264, 2441
BseNI ACTGG 6 cut(s) 1139, 1411, 1736, 1863, 1990, 2266
BseRI GAGGAG 4 cut(s) 1282, 1405, 1570, 1655
BseXI GCAGC 2 cut(s) 67, 258
Bsh1285I CGRYCG 1 cut(s) 2349
BshFI GGCC 1 cut(s) 1660
BshNI GGYRCC 2 cut(s) 624, 853
BshTI ACCGGT 1 cut(s) 2144
BshVI ATCGAT 1 cut(s) 1252
BsiEI CGRYCG 1 cut(s) 2349
BsiHKAI GWGCWC 1 cut(s) 308
BsiHKCI CYCGRG 3 cut(s) 149, 301, 2024
BsiSI CCGG 4 cut(s) 285, 441, 882, 2145
BslFI GGGAC 1 cut(s) 691
BslI CCNNNNNNNGG 3 cut(s) 343, 408, 773
BsmAI GTCTC 4 cut(s) 729, 1497, 1637, 1814
BsmFI GGGAC 1 cut(s) 691
BsmI GAATGC 3 cut(s) 375, 816, 931
BsnI GGCC 1 cut(s) 1660
Bso31I GGTCTC 1 cut(s) 729
BsoBI CYCGRG 3 cut(s) 149, 301, 2024
Bsp119I TTCGAA 2 cut(s) 102, 1425
Bsp1286I GDGCHC 2 cut(s) 308, 536
Bsp13I TCCGGA 1 cut(s) 440
Bsp143I GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
Bsp19I CCATGG 1 cut(s) 1059
BspACI CCGC 5 cut(s) 77, 1369, 1603, 1777, 2345
BspANI GGCC 1 cut(s) 1660
BspCNI CTCAG 9 cut(s) 151, 648, 701, 1323, 1630, 2046, 2164, 2265, 2440
BspDI ATCGAT 1 cut(s) 1252
BspEI TCCGGA 1 cut(s) 440
BspLI GGNNCC 3 cut(s) 626, 855, 2138
BspMAI CTGCAG 2 cut(s) 85, 1034
BspPI GGATC 6 cut(s) 1051, 1723, 1790, 2131, 2144, 2307
BspT104I TTCGAA 2 cut(s) 102, 1425
BspT107I GGYRCC 2 cut(s) 624, 853
BspTNI GGTCTC 1 cut(s) 729
BsrDI GCAATG 4 cut(s) 72, 1368, 1746, 1981
BsrFI RCCGGY 1 cut(s) 2144
BsrI ACTGG 6 cut(s) 1139, 1411, 1736, 1863, 1990, 2266
BssAI RCCGGY 1 cut(s) 2144
BssECI CCNNGG 2 cut(s) 88, 1059
BssMI GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
BssT1I CCWWGG 1 cut(s) 1059
Bst2UI CCWGG 3 cut(s) 774, 1713, 1800
Bst4CI ACNGT 4 cut(s) 764, 1285, 1831, 2076
Bst6I CTCTTC 2 cut(s) 17, 317
BstBI TTCGAA 2 cut(s) 102, 1425
BstC8I GCNNGC 5 cut(s) 548, 683, 1066, 1737, 1781
BstDSI CCRYGG 2 cut(s) 88, 1059
BstF5I GGATG 3 cut(s) 163, 173, 1637
BstKTI GATC 7 cut(s) 846, 1046, 1674, 1718, 1798, 2139, 2302
BstMAI GTCTC 4 cut(s) 729, 1497, 1637, 1814
BstMBI GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
BstMCI CGRYCG 1 cut(s) 2349
BstMWI GCNNNNNNNGC 1 cut(s) 2050
BstNI CCWGG 3 cut(s) 774, 1713, 1800
BstNSI RCATGY 6 cut(s) 550, 673, 1096, 1592, 2017, 2465
BstSCI CCNGG 3 cut(s) 772, 1711, 1798
BstSFI CTRYAG 2 cut(s) 81, 1030
BstV1I GCAGC 2 cut(s) 67, 258
BstV2I GAAGAC 3 cut(s) 111, 797, 2464
BstX2I RGATCY 4 cut(s) 843, 1795, 2136, 2299
BstYI RGATCY 4 cut(s) 843, 1795, 2136, 2299
Bsu15I ATCGAT 1 cut(s) 1252
Bsu36I CCTNAGG 2 cut(s) 1638, 1926
BsuRI GGCC 1 cut(s) 1660
BsuTUI ATCGAT 1 cut(s) 1252
BtgI CCRYGG 2 cut(s) 88, 1059
BtsCI GGATG 3 cut(s) 163, 173, 1637
BtsI GCAGTG 1 cut(s) 1513
BtsIMutI CAGTG 4 cut(s) 518, 626, 1513, 2314
Cac8I GCNNGC 5 cut(s) 548, 683, 1066, 1737, 1781
Cfr10I RCCGGY 1 cut(s) 2144
Cfr13I GGNCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
ClaI ATCGAT 1 cut(s) 1252
CseI GACGC 1 cut(s) 1632
Csp6I GTAC 2 cut(s) 201, 854
CspAI ACCGGT 1 cut(s) 2144
CviQI GTAC 2 cut(s) 201, 854
DpnI GATC 7 cut(s) 845, 1045, 1673, 1717, 1797, 2138, 2301
DpnII GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
DraI TTTAAA 1 cut(s) 1017
DriI GACNNNNNGTC 1 cut(s) 1096
EaeI YGGCCR 1 cut(s) 1658
Eam1104I CTCTTC 2 cut(s) 17, 317
Eam1105I GACNNNNNGTC 1 cut(s) 1096
EarI CTCTTC 2 cut(s) 17, 317
EciI GGCGGA 1 cut(s) 1766
Eco130I CCWWGG 1 cut(s) 1059
Eco24I GRGCYC 1 cut(s) 536
Eco31I GGTCTC 1 cut(s) 729
Eco47I GGWCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
Eco57I CTGAAG 2 cut(s) 146, 1652
Eco81I CCTNAGG 2 cut(s) 1638, 1926
Eco88I CYCGRG 3 cut(s) 149, 301, 2024
EcoO109I RGGNCCY 1 cut(s) 692
EcoRI GAATTC 1 cut(s) 193
EcoRII CCWGG 3 cut(s) 772, 1711, 1798
EcoT14I CCWWGG 1 cut(s) 1059
EcoT22I ATGCAT 1 cut(s) 931
EcoT38I GRGCYC 1 cut(s) 536
ErhI CCWWGG 1 cut(s) 1059
FaqI GGGAC 1 cut(s) 691
FblI GTMKAC 1 cut(s) 1264
Fnu4HI GCNGC 4 cut(s) 78, 81, 247, 1369
FokI GGATG 3 cut(s) 150, 160, 1644
FriOI GRGCYC 1 cut(s) 536
Fsp4HI GCNGC 4 cut(s) 78, 81, 247, 1369
FspBI CTAG 3 cut(s) 488, 1451, 1496
GluI GCNGC 4 cut(s) 78, 81, 247, 1369
GsuI CTGGAG 1 cut(s) 1821
HaeIII GGCC 1 cut(s) 1660
HapII CCGG 4 cut(s) 285, 441, 882, 2145
HgaI GACGC 1 cut(s) 1632
HincII GTYRAC 5 cut(s) 70, 364, 792, 1288, 1770
HindII GTYRAC 5 cut(s) 70, 364, 792, 1288, 1770
HindIII AAGCTT 4 cut(s) 395, 1142, 1351, 2084
HpaI GTTAAC 2 cut(s) 70, 364
HpaII CCGG 4 cut(s) 285, 441, 882, 2145
HphI GGTGA 7 cut(s) 43, 130, 745, 1873, 2000, 2238, 2444
HpyAV CCTTC 3 cut(s) 1382, 1564, 1720
HpyCH4III ACNGT 4 cut(s) 764, 1285, 1831, 2076
HpyF10VI GCNNNNNNNGC 1 cut(s) 2050
Kpn2I TCCGGA 1 cut(s) 440
KpnI GGTACC 1 cut(s) 857
KspAI GTTAAC 2 cut(s) 70, 364
Kzo9I GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
LmnI GCTCC 2 cut(s) 123, 151
Lsp1109I GCAGC 2 cut(s) 67, 258
LweI GCATC 2 cut(s) 172, 938
MaeI CTAG 3 cut(s) 488, 1451, 1496
MaeIII GTNAC 5 cut(s) 226, 884, 2186, 2352, 2450
MalI GATC 7 cut(s) 845, 1045, 1673, 1717, 1797, 2138, 2301
MboI GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
MfeI CAATTG 3 cut(s) 113, 740, 2123
MflI RGATCY 4 cut(s) 843, 1795, 2136, 2299
MhlI GDGCHC 2 cut(s) 308, 536
MlsI TGGCCA 1 cut(s) 1660
MluNI TGGCCA 1 cut(s) 1660
MlyI GAGTC 6 cut(s) 161, 625, 811, 977, 1283, 2036
MmeI TCCRAC 2 cut(s) 1149, 1632
Mox20I TGGCCA 1 cut(s) 1660
Mph1103I ATGCAT 1 cut(s) 931
MroI TCCGGA 1 cut(s) 440
MroXI GAANNNNTTC 1 cut(s) 1414
MscI TGGCCA 1 cut(s) 1660
MslI CAYNNNNRTG 2 cut(s) 513, 897
Msp20I TGGCCA 1 cut(s) 1660
MspI CCGG 4 cut(s) 285, 441, 882, 2145
MspR9I CCNGG 3 cut(s) 774, 1713, 1800
MunI CAATTG 3 cut(s) 113, 740, 2123
Mva1269I GAATGC 3 cut(s) 375, 816, 931
MvaI CCWGG 3 cut(s) 774, 1713, 1800
MwoI GCNNNNNNNGC 1 cut(s) 2050
NcoI CCATGG 1 cut(s) 1059
NdeII GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
NlaIV GGNNCC 3 cut(s) 626, 855, 2138
NmuCI GTSAC 2 cut(s) 2352, 2450
NsiI ATGCAT 1 cut(s) 931
NspI RCATGY 6 cut(s) 550, 673, 1096, 1592, 2017, 2465
NspV TTCGAA 2 cut(s) 102, 1425
PaeI GCATGC 1 cut(s) 550
PaeR7I CTCGAG 2 cut(s) 301, 2024
PciI ACATGT 2 cut(s) 1092, 2461
PctI GAATGC 3 cut(s) 375, 816, 931
PdmI GAANNNNTTC 1 cut(s) 1414
PfoI TCCNGGA 2 cut(s) 772, 1798
PinAI ACCGGT 1 cut(s) 2144
PkrI GCNGC 4 cut(s) 79, 82, 248, 1370
PleI GAGTC 6 cut(s) 160, 624, 810, 977, 1283, 2035
PpsI GAGTC 6 cut(s) 160, 624, 810, 977, 1283, 2035
PpuMI RGGWCCY 1 cut(s) 692
PscI ACATGT 2 cut(s) 1092, 2461
PsiI TTATAA 1 cut(s) 1026
Psp5II RGGWCCY 1 cut(s) 692
Psp6I CCWGG 3 cut(s) 772, 1711, 1798
PspGI CCWGG 3 cut(s) 772, 1711, 1798
PspN4I GGNNCC 3 cut(s) 626, 855, 2138
PspPI GGNCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
PspPPI RGGWCCY 1 cut(s) 692
PspXI VCTCGAGB 2 cut(s) 301, 2024
PstI CTGCAG 2 cut(s) 85, 1034
PsuI RGATCY 4 cut(s) 843, 1795, 2136, 2299
RsaI GTAC 2 cut(s) 202, 855
RsaNI GTAC 2 cut(s) 201, 854
RseI CAYNNNNRTG 2 cut(s) 513, 897
SatI GCNGC 4 cut(s) 78, 81, 247, 1369
Sau3AI GATC 7 cut(s) 843, 1043, 1671, 1715, 1795, 2136, 2299
Sau96I GGNCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
SchI GAGTC 6 cut(s) 161, 625, 811, 977, 1283, 2036
ScrFI CCNGG 3 cut(s) 774, 1713, 1800
SduI GDGCHC 2 cut(s) 308, 536
SfaNI GCATC 2 cut(s) 172, 938
SfcI CTRYAG 2 cut(s) 81, 1030
Sfr274I CTCGAG 2 cut(s) 301, 2024
SfuI TTCGAA 2 cut(s) 102, 1425
SinI GGWCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
SlaI CTCGAG 2 cut(s) 301, 2024
SmiMI CAYNNNNRTG 2 cut(s) 513, 897
SmlI CTYRAG 6 cut(s) 301, 406, 527, 920, 1387, 2024
SmoI CTYRAG 6 cut(s) 301, 406, 527, 920, 1387, 2024
SphI GCATGC 1 cut(s) 550
SsiI CCGC 5 cut(s) 77, 1369, 1603, 1777, 2345
SspI AATATT 1 cut(s) 1160
SspMI CTAG 3 cut(s) 488, 1451, 1496
StyD4I CCNGG 3 cut(s) 772, 1711, 1798
StyI CCWWGG 1 cut(s) 1059
TaaI ACNGT 4 cut(s) 764, 1285, 1831, 2076
TaqII GACCGA 1 cut(s) 711
TauI GCSGC 2 cut(s) 80, 1371
TscAI CASTG 4 cut(s) 518, 626, 1513, 2314
TseFI GTSAC 2 cut(s) 2352, 2450
TseI GCWGC 2 cut(s) 80, 246
Tsp45I GTSAC 2 cut(s) 2352, 2450
TspDTI ATGAA 8 cut(s) 17, 34, 162, 887, 1287, 1688, 1799, 2088
TspGWI ACGGA 3 cut(s) 77, 1188, 1776
TspRI CASTG 4 cut(s) 518, 626, 1513, 2314
VpaK11BI GGWCC 6 cut(s) 692, 764, 946, 1605, 1916, 2147
XapI RAATTY 8 cut(s) 193, 538, 914, 1177, 1275, 1427, 1613, 2064
XbaI TCTAGA 1 cut(s) 1450
XceI RCATGY 6 cut(s) 550, 673, 1096, 1592, 2017, 2465
XhoI CTCGAG 2 cut(s) 301, 2024
XmiI GTMKAC 1 cut(s) 1264
XmnI GAANNNNTTC 1 cut(s) 1414
XspI CTAG 3 cut(s) 488, 1451, 1496
Zsp2I ATGCAT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.