Rroxscaffold_6G00417810

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
39424168 .. 39427342
3175 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00417810.1

Sequence Viewer

Length: 2868 bp
ATGAATACTCGGCTACATTTCTTCCTTTTCTTAGTCACACTCTGTGTTAGTATCATCCCTCTAGTTCATAGCAAGTGTATTCCAGACCAGCAACAGTCATTGCTCCATTTCAAAATCAACCTTTTATTCAATGCCTCTCTTTCCTCCAAGCTTATTACCCGGAACTCAAGTACCGATTGTTGTACTTGGGTCGGCCTTACTTGCAGCACCAATGGCCATGTTCTGGGTCTTGACCTCAGCAAAGAATCAATCTCAGGTGGCATTGACAATTCCAGCAGTCTCTTCCATCTTCAAAATCTTCAAAGCCTCAATTTGGCCTACAACCTCAATCTTGGTAACGGCTCTCAATCAATTCCATCTGCAATCGGGCAGCTCATGAATTTGAGGTATCTAAATTTATCTTACAATGCTTATTCAGGGAAAATTCCGATTGAGATTTCACGCTTGACGAGCAGAGGGAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAGGGTGTTGAGCTTGTCCTCTTGTAATCTTTCAGGCCCTTTTCACGAGTCTCTTGCTAACCTCCGATCTCTCTCTGTGATTCAATTGAGATTCAACAAAATCTCTGCTCCAGTTCCAGCATTCTTTGCCAACTTTTCAAACTTGACATCCTTGAGTCTCAATGATTGTAATTTACAAGGAACATTTCCAAAAGATATCTTTCAATTACCTTCTCTTTGTGAGATTCGCCTTTCGGGAAGTGAAAACCTTGATGGTTCCTTGCCAGAATTTCTAAAGAATGGATCTCTTCAGTACCTGGATCTAAGGGGGACTAATTTTTCAGGGGTATTACCAAACTCTATTGGTAACCTCAAAATGTTGTCCACAATTGATATTACAAACTGTAATTTCACGGGATCAATCCCCAAGTCAATGACAAACCTTACGCAATTGGTTTCTTTGTCAATGTCTGGAAACAACTTTGAAGGTTCAATTCCGTCATTCAGTGGGGCCAATAATTTAGAACGCATAGAGCTCTCTTCAAATGGTCTGATAGGTAATATTAATTGCATCCAGTGGGAAAACCTTACTAAACTATTCTTTCTCGACTTATCTGGCAATATGCTCAATGGGACTATTCCATCAGCTCTGTTTTCTCTTCCCTTGCTGGATAGTCTATATCTTTCCGACAACCAATTCTTTGGTCATTTTCCTGAAATTTCTAATCTCTCATCCTACTCTGTCAAACTCCTTTATTTGAGTGGAAACAATCTAGAAGGGCCAATACCCATGTCTATCTTTAATTTACGGGGTCTTACAATTCTTCTTCTTTCTTCAAATAATTTCAGTGGCTCATTTCCTCTAGATGGTCTTCAACATCTGAGAAATCTTTCTTATCTTGATCTTTCACACAATAGCTTGCTTCTTAGCCATGATGCTACCAATTTATCATATTCCTACTTTCCTCAGTTTCAATATTTGTGGTTGGCTTCATTAAACTTGAGAACATTCCCTGATTTCTTGAGAAATCAATCTAAATTATGGCGGTTGGATCTTTCAGATAACCAGATACAGGGCAAGATACCCAACTGGATTTGGAGGTTCAGAGATCTCGAGTACCTAAATCTTTCGTGTAACTCTCTAGAAACTCTAGAAGGTCATACAATCAATCTCACTTCTATGCAATCCCTTGACCTTCATTCCAACAAGCTTCATGGGAAAATCCCAATTTTCTCGTCACCTAACATGCTTTATCTGGATTACTCAAGGAACAACCTCAGCTCTACCATAGCAACTACCATTGAAGATATGATTCTTCACACCAGATTCTTCTCTGTTGCTAGCAATAACCTTCAAGGGATCATCCCAGGATCAATATGCAATTCAGATAGCCTTGAGGTTCTTGATATGTCAAATAATTCCTTGAGTGGCACAGTGCCTCACTGCTTGACAACAATGAGCACTCTTTCGGACATATCCACCTTGCGTGTCCTTATCTTGAGATCCAATAAATTTTATGGAGGTATTGGATGTCCCAAGATTAATGGCACTTGGCCAATGCTTCAAATCATGGACCTAGCTCACAACAATTTTAGTAGAAATGTACCAGGGATAGCATTGACAACTTGGCAAGCAATGATGGCTAATGAAGATGATGCCTCATCAGAGCTCAATCACCTTCAATTCCAAAACATCTCTAGTGGGATTTATTATCAGGATACAGTTACGATTACCAGCAATGGTTTCGAGACAGAGCTGATAAAGATTTTAACTGTCTTCACCTCGATCGATTTCTCATGCAACAAGTTCAATGGATCAATACCTTATGAAATTGGAGAACTCAAATCACTGCATATCCTCAACTTGTCCAATAATGCTTTCACAGGTGCAATTCCACTATCATTGAGCAACTTGAGTCAGCTAGAGTCTTTAGACCTCTCACAGAACACCTTGAGCGGTCAAATTCCACCACAGCTTACAAAACTCACTTTCCTTGCAGTCTTGAATTTTTCACATAATCAACTAGTCGGCAGGATTCCGAGCAGTAACCAGTTTCCAACATTTCCAAAATCCTCCTTTGAAGGAAACAAAGATTTATTCGGGCCTCCTTTGACTGAAGAAAATAGAACAAGGTTGTCACCTCCGACCACGGAAAGAAGCCATCCAAGTTCTGGAGATGAGATTGATTGGAATATCATCATTGTTGAGATTGGATTTACATGTGGGTTCGGAATTGTGGTTGGATCACTTTTGTGTTGCAAGAGATGGAGGAAATGGTATTATAGAACTATGTATCGCATTCTTGTGAAGATATTTCCTCAGCTGGACCAAAGGTTTGGTCATCACAGAAGACATGTGTATATAGGCGCAAGGTACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

955

Amino Acids

106.52

Weight (kDa)

6.9

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 262 - 338 1.3e-09 Leucine-rich repeat region
LRR_8 PF13855 408 - 467 7e-06 Leucine rich repeat
LRR_8 PF13855 506 - 564 1.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 468
AccB7I CCANNNNNTGG 2 cut(s) 223, 2651
AccBSI CCGCTC 1 cut(s) 2436
AciI CCGC 2 cut(s) 1525, 2436
AclWI GGATC 9 cut(s) 790, 807, 904, 1539, 1847, 1858, 1977, 2302, 2731
AcoI YGGCCR 2 cut(s) 214, 2033
AcsI RAATTY 8 cut(s) 379, 394, 423, 767, 1197, 1991, 2442, 2485
AcuI CTGAAG 2 cut(s) 773, 2616
AdeI CACNNNGTG 1 cut(s) 44
AfaI GTAC 6 cut(s) 172, 184, 794, 1598, 2085, 2855
AfiI CCNNNNNNNGG 6 cut(s) 223, 313, 501, 1346, 1552, 2651
AflIII ACRYGT 2 cut(s) 2699, 2833
AhlI ACTAGT 1 cut(s) 2503
AjnI CCWGG 3 cut(s) 795, 1846, 2086
AjuI GAANNNNNNNTTGG 2 cut(s) 2342, 2374
AleI CACNNNNGTG 1 cut(s) 2731
Alw21I GWGCWC 3 cut(s) 1017, 1943, 2151
Alw26I GTCTC 5 cut(s) 284, 555, 662, 2222, 2854
AlwI GGATC 9 cut(s) 790, 807, 904, 1539, 1847, 1858, 1977, 2302, 2731
AlwNI CAGNNNCTG 1 cut(s) 796
Ama87I CYCGRG 1 cut(s) 1592
AoxI GGCC 8 cut(s) 193, 214, 315, 535, 990, 1259, 2033, 2582
ApeKI GCWGC 2 cut(s) 204, 370
ApoI RAATTY 8 cut(s) 379, 394, 423, 767, 1197, 1991, 2442, 2485
ArsI GACNNNNNNTTYG 4 cut(s) 2798, 2803, 2830, 2835
AseI ATTAAT 2 cut(s) 1044, 2022
Asp700I GAANNNNTTC 1 cut(s) 1369
AspLEI GCGC 1 cut(s) 2849
AspS9I GGNCC 6 cut(s) 536, 990, 1259, 2053, 2582, 2806
AsuC2I CCSGG 1 cut(s) 160
AsuHPI GGTGA 4 cut(s) 1710, 2147, 2251, 2610
AsuNHI GCTAGC 1 cut(s) 1820
AvaI CYCGRG 1 cut(s) 1592
AvaII GGWCC 2 cut(s) 2053, 2806
AxyI CCTNAGG 1 cut(s) 500
BaeI ACNNNNGTAYC 2 cut(s) 154, 187
BalI TGGCCA 2 cut(s) 216, 2035
BanI GGYRCC 1 cut(s) 468
BanII GRGCYC 2 cut(s) 1017, 2151
BarI GAAGNNNNNNTAC 2 cut(s) 1248, 1280
BauI CACGAG 1 cut(s) 545
BbsI GAAGAC 3 cut(s) 1343, 2248, 2836
Bbv12I GWGCWC 3 cut(s) 1017, 1943, 2151
BbvCI CCTCAGC 3 cut(s) 236, 1757, 2799
BbvI GCAGC 2 cut(s) 216, 382
BccI CCATC 8 cut(s) 294, 364, 746, 1129, 1340, 2113, 2649, 2739
BceAI ACGGC 1 cut(s) 355
BcgI CGANNNNNNTGC 4 cut(s) 536, 570, 2206, 2240
BciT130I CCWGG 3 cut(s) 797, 1848, 2088
BciVI GTATCC 1 cut(s) 2191
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 5 cut(s) 284, 555, 662, 2222, 2854
BcuI ACTAGT 1 cut(s) 2503
BfuI GTATCC 1 cut(s) 2191
BglII AGATCT 1 cut(s) 1588
BisI GCNGC 2 cut(s) 205, 371
BlsI GCNGC 2 cut(s) 206, 372
Bme1390I CCNGG 4 cut(s) 160, 797, 1848, 2088
Bme18I GGWCC 2 cut(s) 2053, 2806
BmeT110I CYCGRG 1 cut(s) 1592
BmgT120I GGNCC 6 cut(s) 536, 990, 1259, 2053, 2582, 2806
BmiI GGNNCC 3 cut(s) 470, 757, 991
BmrFI CCNGG 4 cut(s) 160, 797, 1848, 2088
BmsI GCATC 3 cut(s) 1059, 1405, 2125
BmtI GCTAGC 1 cut(s) 1824
BpiI GAAGAC 3 cut(s) 1343, 2248, 2836
BpmI CTGGAG 2 cut(s) 594, 2673
Bpu10I CCTNAGC 3 cut(s) 236, 1757, 2799
BpuMI CCSGG 1 cut(s) 160
Bsa29I ATCGAT 1 cut(s) 2268
BsaJI CCNNGG 3 cut(s) 1846, 2087, 2628
Bsc4I CCNNNNNNNGG 6 cut(s) 223, 313, 501, 1346, 1552, 2651
Bse1I ACTGG 5 cut(s) 611, 1054, 1574, 2530, 2861
Bse21I CCTNAGG 1 cut(s) 500
Bse3DI GCAATG 3 cut(s) 98, 2121, 2224
BseBI CCWGG 3 cut(s) 797, 1848, 2088
BseCI ATCGAT 1 cut(s) 2268
BseDI CCNNGG 3 cut(s) 1846, 2087, 2628
BseGI GGATG 7 cut(s) 54, 647, 1050, 1211, 1842, 2015, 2641
BseLI CCNNNNNNNGG 6 cut(s) 223, 313, 501, 1346, 1552, 2651
BseMI GCAATG 3 cut(s) 98, 2121, 2224
BseMII CTCAG 7 cut(s) 250, 267, 514, 1352, 1460, 1771, 2813
BseNI ACTGG 5 cut(s) 611, 1054, 1574, 2530, 2861
BseXI GCAGC 2 cut(s) 216, 382
Bsh1285I CGRYCG 1 cut(s) 2268
BshFI GGCC 8 cut(s) 195, 216, 317, 537, 992, 1261, 2035, 2584
BshNI GGYRCC 1 cut(s) 468
BshVI ATCGAT 1 cut(s) 2268
BsiEI CGRYCG 1 cut(s) 2268
BsiHKAI GWGCWC 3 cut(s) 1017, 1943, 2151
BsiHKCI CYCGRG 1 cut(s) 1592
BsiSI CCGG 1 cut(s) 160
BslFI GGGAC 3 cut(s) 823, 1126, 1998
BslI CCNNNNNNNGG 6 cut(s) 223, 313, 501, 1346, 1552, 2651
BsmAI GTCTC 5 cut(s) 284, 555, 662, 2222, 2854
BsmBI CGTCTC 1 cut(s) 2854
BsmFI GGGAC 3 cut(s) 823, 1126, 1998
BsmI GAATGC 2 cut(s) 620, 2778
BsnI GGCC 8 cut(s) 195, 216, 317, 537, 992, 1261, 2035, 2584
BsoBI CYCGRG 1 cut(s) 1592
Bsp1286I GDGCHC 3 cut(s) 1017, 1943, 2151
BspACI CCGC 2 cut(s) 1525, 2436
BspANI GGCC 8 cut(s) 195, 216, 317, 537, 992, 1261, 2035, 2584
BspCNI CTCAG 7 cut(s) 249, 266, 513, 1353, 1459, 1770, 2812
BspDI ATCGAT 1 cut(s) 2268
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 3 cut(s) 470, 757, 991
BspOI GCTAGC 1 cut(s) 1824
BspPI GGATC 9 cut(s) 790, 807, 904, 1539, 1847, 1858, 1977, 2302, 2731
BspT107I GGYRCC 1 cut(s) 468
BsrBI CCGCTC 1 cut(s) 2436
BsrDI GCAATG 3 cut(s) 98, 2121, 2224
BsrI ACTGG 5 cut(s) 611, 1054, 1574, 2530, 2861
BssECI CCNNGG 3 cut(s) 1846, 2087, 2628
BssSI CACGAG 1 cut(s) 545
Bst2BI CACGAG 1 cut(s) 545
Bst2UI CCWGG 3 cut(s) 797, 1848, 2088
Bst4CI ACNGT 5 cut(s) 96, 884, 1915, 2203, 2254
Bst6I CTCTTC 4 cut(s) 287, 792, 1024, 1143
BstAPI GCANNNNNTGC 1 cut(s) 626
BstC8I GCNNGC 3 cut(s) 1400, 1822, 2112
BstDSI CCRYGG 1 cut(s) 2628
BstEII GGTNACC 1 cut(s) 845
BstF5I GGATG 7 cut(s) 54, 647, 1050, 1211, 1842, 2015, 2641
BstHHI GCGC 1 cut(s) 2849
BstMAI GTCTC 5 cut(s) 284, 555, 662, 2222, 2854
BstMCI CGRYCG 1 cut(s) 2268
BstMWI GCNNNNNNNGC 5 cut(s) 201, 213, 450, 626, 2120
BstNI CCWGG 3 cut(s) 797, 1848, 2088
BstNSI RCATGY 3 cut(s) 1729, 2703, 2837
BstPI GGTNACC 1 cut(s) 845
BstSCI CCNGG 4 cut(s) 158, 795, 1846, 2086
BstV1I GCAGC 2 cut(s) 216, 382
BstV2I GAAGAC 3 cut(s) 1343, 2248, 2836
BstX2I RGATCY 5 cut(s) 782, 799, 1531, 1588, 1982
BstXI CCANNNNNNTGG 2 cut(s) 1181, 2816
BstYI RGATCY 5 cut(s) 782, 799, 1531, 1588, 1982
Bsu15I ATCGAT 1 cut(s) 2268
Bsu36I CCTNAGG 1 cut(s) 500
BsuI GTATCC 1 cut(s) 2191
BsuRI GGCC 8 cut(s) 195, 216, 317, 537, 992, 1261, 2035, 2584
BsuTUI ATCGAT 1 cut(s) 2268
BtgI CCRYGG 1 cut(s) 2628
BtsCI GGATG 7 cut(s) 54, 647, 1050, 1211, 1842, 2015, 2641
BtsI GCAGTG 2 cut(s) 1921, 2327
BtsIMutI CAGTG 6 cut(s) 991, 1061, 1333, 1920, 1921, 2327
Cac8I GCNNGC 3 cut(s) 1400, 1822, 2112
CaiI CAGNNNCTG 1 cut(s) 796
CciI TCATGA 1 cut(s) 375
CfoI GCGC 1 cut(s) 2849
Cfr13I GGNCC 6 cut(s) 536, 990, 1259, 2053, 2582, 2806
ClaI ATCGAT 1 cut(s) 2268
Csp6I GTAC 6 cut(s) 171, 183, 793, 1597, 2084, 2854
CspCI CAANNNNNGTGG 4 cut(s) 1442, 1477, 2364, 2399
CviQI GTAC 6 cut(s) 171, 183, 793, 1597, 2084, 2854
DraIII CACNNNGTG 1 cut(s) 44
EaeI YGGCCR 2 cut(s) 214, 2033
Eam1104I CTCTTC 4 cut(s) 287, 792, 1024, 1143
EarI CTCTTC 4 cut(s) 287, 792, 1024, 1143
Ecl136II GAGCTC 2 cut(s) 1015, 2149
Eco24I GRGCYC 2 cut(s) 1017, 2151
Eco32I GATATC 1 cut(s) 697
Eco47I GGWCC 2 cut(s) 2053, 2806
Eco53kI GAGCTC 2 cut(s) 1015, 2149
Eco57I CTGAAG 2 cut(s) 773, 2616
Eco81I CCTNAGG 1 cut(s) 500
Eco88I CYCGRG 1 cut(s) 1592
Eco91I GGTNACC 1 cut(s) 845
EcoICRI GAGCTC 2 cut(s) 1015, 2149
EcoO109I RGGNCCY 1 cut(s) 536
EcoO65I GGTNACC 1 cut(s) 845
EcoRII CCWGG 3 cut(s) 795, 1846, 2086
EcoRV GATATC 1 cut(s) 697
EcoT38I GRGCYC 2 cut(s) 1017, 2151
Esp3I CGTCTC 1 cut(s) 2854
FaqI GGGAC 3 cut(s) 823, 1126, 1998
Fnu4HI GCNGC 2 cut(s) 205, 371
FokI GGATG 7 cut(s) 41, 634, 1037, 1198, 1829, 2022, 2628
FriOI GRGCYC 2 cut(s) 1017, 2151
Fsp4HI GCNGC 2 cut(s) 205, 371
GlaI GCGC 1 cut(s) 2848
GluI GCNGC 2 cut(s) 205, 371
GsuI CTGGAG 2 cut(s) 594, 2673
HaeIII GGCC 8 cut(s) 195, 216, 317, 537, 992, 1261, 2035, 2584
HapII CCGG 1 cut(s) 160
HhaI GCGC 1 cut(s) 2849
Hin6I GCGC 1 cut(s) 2847
HinP1I GCGC 1 cut(s) 2847
HindIII AAGCTT 2 cut(s) 149, 1688
HpaII CCGG 1 cut(s) 160
HphI GGTGA 4 cut(s) 1710, 2147, 2251, 2610
Hpy166II GTNNAC 1 cut(s) 864
Hpy8I GTNNAC 1 cut(s) 864
HpyAV CCTTC 9 cut(s) 500, 720, 959, 1250, 1628, 1685, 1841, 2168, 2555
HpyCH4III ACNGT 5 cut(s) 96, 884, 1915, 2203, 2254
HpyCH4IV ACGT 1 cut(s) 2863
HpyF10VI GCNNNNNNNGC 5 cut(s) 201, 213, 450, 626, 2120
HpySE526I ACGT 1 cut(s) 2863
HspAI GCGC 1 cut(s) 2847
LmnI GCTCC 2 cut(s) 108, 613
Lsp1109I GCAGC 2 cut(s) 216, 382
LweI GCATC 3 cut(s) 1059, 1405, 2125
MaeII ACGT 1 cut(s) 2863
MaeIII GTNAC 8 cut(s) 34, 335, 845, 1613, 1716, 2203, 2525, 2616
MbiI CCGCTC 1 cut(s) 2436
MfeI CAATTG 3 cut(s) 584, 867, 929
MflI RGATCY 5 cut(s) 782, 799, 1531, 1588, 1982
MhlI GDGCHC 3 cut(s) 1017, 1943, 2151
MlsI TGGCCA 2 cut(s) 216, 2035
MluNI TGGCCA 2 cut(s) 216, 2035
MlyI GAGTC 4 cut(s) 557, 664, 2404, 2414
MmeI TCCRAC 6 cut(s) 1191, 1509, 1707, 2561, 2648, 2701
Mox20I TGGCCA 2 cut(s) 216, 2035
MroXI GAANNNNTTC 1 cut(s) 1369
MscI TGGCCA 2 cut(s) 216, 2035
MseI TTAA 5 cut(s) 1044, 1281, 1475, 2022, 2249
MslI CAYNNNNRTG 3 cut(s) 1658, 2731, 2783
Msp20I TGGCCA 2 cut(s) 216, 2035
MspA1I CMGCKG 1 cut(s) 2803
MspI CCGG 1 cut(s) 160
MspR9I CCNGG 4 cut(s) 160, 797, 1848, 2088
MunI CAATTG 3 cut(s) 584, 867, 929
Mva1269I GAATGC 2 cut(s) 620, 2778
MvaI CCWGG 3 cut(s) 797, 1848, 2088
MwoI GCNNNNNNNGC 5 cut(s) 201, 213, 450, 626, 2120
NciI CCSGG 1 cut(s) 160
NheI GCTAGC 1 cut(s) 1820
NlaIV GGNNCC 3 cut(s) 470, 757, 991
NmuCI GTSAC 3 cut(s) 34, 1716, 2616
NspI RCATGY 3 cut(s) 1729, 2703, 2837
OliI CACNNNNGTG 1 cut(s) 2731
PaeR7I CTCGAG 1 cut(s) 1592
PagI TCATGA 1 cut(s) 375
PciI ACATGT 2 cut(s) 2699, 2833
PctI GAATGC 2 cut(s) 620, 2778
PdmI GAANNNNTTC 1 cut(s) 1369
PfeI GAWTC 7 cut(s) 245, 580, 591, 724, 1792, 1806, 2515
PflMI CCANNNNNTGG 2 cut(s) 223, 2651
PkrI GCNGC 2 cut(s) 206, 372
Ple19I CGATCG 1 cut(s) 2268
PleI GAGTC 4 cut(s) 556, 663, 2403, 2413
PpsI GAGTC 4 cut(s) 556, 663, 2403, 2413
PscI ACATGT 2 cut(s) 2699, 2833
PshBI ATTAAT 2 cut(s) 1044, 2022
Psp124BI GAGCTC 2 cut(s) 1017, 2151
Psp6I CCWGG 3 cut(s) 795, 1846, 2086
PspEI GGTNACC 1 cut(s) 845
PspGI CCWGG 3 cut(s) 795, 1846, 2086
PspN4I GGNNCC 3 cut(s) 470, 757, 991
PspPI GGNCC 6 cut(s) 536, 990, 1259, 2053, 2582, 2806
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 5 cut(s) 782, 799, 1531, 1588, 1982
PvuI CGATCG 1 cut(s) 2268
PvuII CAGCTG 1 cut(s) 2803
RsaI GTAC 6 cut(s) 172, 184, 794, 1598, 2085, 2855
RsaNI GTAC 6 cut(s) 171, 183, 793, 1597, 2084, 2854
RseI CAYNNNNRTG 3 cut(s) 1658, 2731, 2783
SacI GAGCTC 2 cut(s) 1017, 2151
SaqAI TTAA 5 cut(s) 1044, 1281, 1475, 2022, 2249
SatI GCNGC 2 cut(s) 205, 371
Sau96I GGNCC 6 cut(s) 536, 990, 1259, 2053, 2582, 2806
SchI GAGTC 4 cut(s) 557, 664, 2404, 2414
ScrFI CCNGG 4 cut(s) 160, 797, 1848, 2088
SduI GDGCHC 3 cut(s) 1017, 1943, 2151
SfaNI GCATC 3 cut(s) 1059, 1405, 2125
Sfr274I CTCGAG 1 cut(s) 1592
SinI GGWCC 2 cut(s) 2053, 2806
SlaI CTCGAG 1 cut(s) 1592
SmiMI CAYNNNNRTG 3 cut(s) 1658, 2731, 2783
SpeI ACTAGT 1 cut(s) 2503
SsiI CCGC 2 cut(s) 1525, 2436
SspI AATATT 2 cut(s) 1042, 1457
SstI GAGCTC 2 cut(s) 1017, 2151
StyD4I CCNGG 4 cut(s) 158, 795, 1846, 2086
TaaI ACNGT 5 cut(s) 96, 884, 1915, 2203, 2254
TaiI ACGT 1 cut(s) 2866
TaqI TCGA 5 cut(s) 1086, 1593, 2226, 2264, 2268
TatI WGTACW 1 cut(s) 182
TfiI GAWTC 7 cut(s) 245, 580, 591, 724, 1792, 1806, 2515
Tru1I TTAA 5 cut(s) 1044, 1281, 1475, 2022, 2249
Tru9I TTAA 5 cut(s) 1044, 1281, 1475, 2022, 2249
TscAI CASTG 6 cut(s) 991, 1061, 1333, 1920, 1928, 2334
TseFI GTSAC 3 cut(s) 34, 1716, 2616
TseI GCWGC 2 cut(s) 204, 370
Tsp45I GTSAC 3 cut(s) 34, 1716, 2616
TspDTI ATGAA 8 cut(s) 17, 56, 392, 1461, 1667, 1682, 2142, 2322
TspGWI ACGGA 2 cut(s) 966, 2645
TspRI CASTG 6 cut(s) 991, 1061, 1333, 1920, 1928, 2334
Van91I CCANNNNNTGG 2 cut(s) 223, 2651
VpaK11BI GGWCC 2 cut(s) 2053, 2806
VspI ATTAAT 2 cut(s) 1044, 2022
XapI RAATTY 8 cut(s) 379, 394, 423, 767, 1197, 1991, 2442, 2485
XbaI TCTAGA 4 cut(s) 1252, 1342, 1621, 1630
XceI RCATGY 3 cut(s) 1729, 2703, 2837
XcmI CCANNNNNNNNNTGG 1 cut(s) 2648
XhoI CTCGAG 1 cut(s) 1592
XmnI GAANNNNTTC 1 cut(s) 1369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.