RLG00000023650

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
26550456 .. 26558228
7773 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023650

Sequence Viewer

Length: 2298 bp
ATGCCCACTCTGTTCCTCCATTTGTTCCTTTTCTTATTCACAACCACTGTTTCTAACCTCATCCCCGCAGTTCACAGCAACTGCATTGAAGCCCAGCAACAATCATTGCTCCATTTTAAGAAAAGTCTTGAATCTGATTCTTCCAATCTTATCACATGGAATTCGAGTACCGACTGCTGTTCTTGGCTCGGTGGAAATTGCAGCACCAATGGGAGTGTTGTCGGTCTTGACCTCAGCAGCGAGTATATCTCAGGCAGCGTTGACAATTCCAGCAGTATGTTCCAACTTGAACATCTTCAGAGCCTTAATTTGGCCGGGAACGACTTCAATGGCTCTTCAATTCCATCTGCAATTGGAAAGCTTGCAAATTTGAGGCTTGATTCTCTATCCACGTTAATATTGGTTGGAAACCTCATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCTGGTTGTGACTTGTATGGAGCATTTCCCAAAGAGATATTCCAGATACCTTCACTACAGTATGTTGACGTAAGTTATAATTCAGAGCTTCATGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAAATCCTATATCTATACAGCTCCAAGTTTTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTAAAATGTTGTCTATCATAGTCCTTAGAGATTGCAATTTCACAGGAGCAGTTCCAAAGTCACTGGCAAACCTAACACAATTGGGGGATTTGGACTTGTCATCCAACAAGTTTTCTAGTCCGATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGAGTATCTATACTTGACCAACAATCTACTCTACGGGAGTATTCCATTGTCTCATTTTCCTATTTCCTTGCTGCAGTTACGTCTTTCTGGAAATCACTTCTCTGGTCAGTTGCTCGAATTTTCTAATATTCCAGGTCAGATACCCATTTCGATTTGGGAGCTTCCTCTGATCGATACTCTAAATCTAAGTTGTAACAAGTTGACATCTTCGCTTAAAGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCGCGATACTTTTCTTGAAGGTTGTAATTTGGAGACTCTAGCTCTGAGTAGAAATCAAATACAAGGTCAATTTCCAAAATCACTAGTCAATTGTTCAAGCTTAGAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCCTGCCCGTTGAAGACCATATCCACCATGCGTGTTCTTATGTTGCGATCCAACAAATTTTATGGACCCATTGGATGTCCTGAGACCAATGGCACCTGGTCGAAGCTTCAAATCATAGACTTAGCTCATAACAGTTTCAATGGTGAAATACCAGGTACATCATTGACAACATGGCGGGCAATGATGGTTAATGGAGATGATGACCGAAATTACCTTGGCTTTTTTTGGTCACAAGATGGTAAATTTGGGTTCGCTATGAGTTATGGAGATGCAGTAACAGCTACAAGCAAAGGTCTAGAGATGGATCTTGAAAATTTTTTATCAAGCTTCACTTCGATTGACTTCTCTGCTAACGAGTTCAACGGAACAATACCCAAGGAAATGGGCCAACTGAGATCATTACATGTCCTCAATCTGTCCAGTAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGAAGCATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGCGGCCAAATTCCACCACAGTTTGCAAATCTCAATTTCTTGTCATTTTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAGCACTCAGTTATCGACATTTCCAAATACCTCATTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAATAATTGTATTGCCACCTCCGACGTTAAATGGAAGCTCAAGTAATCCGAATTCTGGAGATGAGATTGATTGGAATGTTATCGTTGTTGAAATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAACATCCTGTTCAAGATATTCCCTCAGCTGGAACACAGATTCGGTAATCACAGAAGGCATGTTTACATAAATCAAAGATTTCTGGGTTACAAAGATGATGATGAAGATGGTGATGAGGGTTTGAAGATTGGCCTATGCGTATGCGACGAAATTGACGAGAAAGACATGGTGTTATGGAACCCTTGTACTGGACAATCCAATTCAATGATTGAGGGGTGTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

766

Amino Acids

84.5

Weight (kDa)

5.11

Isoelectric Point (pI)

33.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 64 2.1e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 344 - 403 4.5e-09 Leucine rich repeat
LRR_8 PF13855 539 - 599 8.4e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 552
AccB1I GGYRCC 1 cut(s) 1313
AccB7I CCANNNNNTGG 1 cut(s) 593
AccBSI CCGCTC 1 cut(s) 1728
AccII CGCG 1 cut(s) 1080
AciI CCGC 4 cut(s) 66, 1078, 1396, 1728
AclWI GGATC 6 cut(s) 604, 1078, 1263, 1533, 1801, 1814
AcoI YGGCCR 2 cut(s) 312, 1729
AcsI RAATTY 9 cut(s) 160, 367, 434, 938, 1277, 1463, 1534, 1734, 1945
AcuI CTGAAG 1 cut(s) 281
AfaI GTAC 3 cut(s) 169, 1378, 2260
AfiI CCNNNNNNNGG 5 cut(s) 310, 593, 1949, 2101, 2261
AflIII ACRYGT 2 cut(s) 1624, 1997
AhlI ACTAGT 1 cut(s) 1159
AjnI CCWGG 3 cut(s) 952, 1316, 1372
AjuI GAANNNNNNNTTGG 2 cut(s) 497, 529
Alw26I GTCTC 5 cut(s) 476, 876, 1103, 1298, 1786
AlwI GGATC 6 cut(s) 604, 1078, 1263, 1533, 1801, 1814
AlwNI CAGNNNCTG 1 cut(s) 81
AoxI GGCC 5 cut(s) 312, 1606, 1729, 1874, 2203
ApeKI GCWGC 4 cut(s) 201, 237, 255, 892
ApoI RAATTY 9 cut(s) 160, 367, 434, 938, 1277, 1463, 1534, 1734, 1945
ArsI GACNNNNNNTTYG 2 cut(s) 1126, 1158
AseI ATTAAT 1 cut(s) 789
Asp700I GAANNNNTTC 2 cut(s) 294, 323
AspS9I GGNCC 4 cut(s) 422, 1286, 1606, 1874
AsuC2I CCSGG 1 cut(s) 316
AsuHPI GGTGA 2 cut(s) 1376, 2195
AvaII GGWCC 2 cut(s) 422, 1286
BamHI GGATCC 1 cut(s) 1806
BanI GGYRCC 1 cut(s) 1313
BbsI GAAGAC 1 cut(s) 1241
BbvCI CCTCAGC 2 cut(s) 233, 2097
BbvI GCAGC 4 cut(s) 213, 249, 267, 879
BccI CCATC 7 cut(s) 352, 1399, 1451, 1516, 1675, 2037, 2174
BceAI ACGGC 1 cut(s) 2000
BciT130I CCWGG 3 cut(s) 954, 1318, 1374
BciVI GTATCC 1 cut(s) 1885
BcnI CCSGG 1 cut(s) 316
BcoDI GTCTC 5 cut(s) 476, 876, 1103, 1298, 1786
BcuI ACTAGT 1 cut(s) 1159
BfaI CTAG 4 cut(s) 780, 1115, 1160, 1517
BfmI CTRYAG 2 cut(s) 530, 893
BfuI GTATCC 1 cut(s) 1885
BisI GCNGC 5 cut(s) 202, 238, 256, 893, 1729
BlsI GCNGC 5 cut(s) 203, 239, 257, 894, 1730
Bme1390I CCNGG 4 cut(s) 316, 954, 1318, 1374
Bme18I GGWCC 2 cut(s) 422, 1286
BmgT120I GGNCC 4 cut(s) 422, 1286, 1606, 1874
BmiI GGNNCC 7 cut(s) 429, 571, 1288, 1315, 1808, 1875, 2252
BmrFI CCNGG 4 cut(s) 316, 954, 1318, 1374
BmsI GCATC 2 cut(s) 1204, 1480
BpiI GAAGAC 1 cut(s) 1241
BplI GAGNNNNNCTC 2 cut(s) 233, 265
BpmI CTGGAG 1 cut(s) 1971
Bpu10I CCTNAGC 3 cut(s) 233, 1724, 2097
BpuEI CTTGAG 3 cut(s) 487, 842, 1918
BpuMI CCSGG 1 cut(s) 316
Bsa29I ATCGAT 1 cut(s) 993
BsaI GGTCTC 1 cut(s) 1298
BsaJI CCNNGG 3 cut(s) 1192, 1435, 1596
BsaWI WCCGGW 2 cut(s) 424, 577
BsaXI ACNNNNNCTCC 2 cut(s) 1479, 1509
Bsc4I CCNNNNNNNGG 5 cut(s) 310, 593, 1949, 2101, 2261
Bse1I ACTGG 4 cut(s) 732, 1072, 1641, 2266
Bse3DI GCAATG 2 cut(s) 104, 1407
BseBI CCWGG 3 cut(s) 954, 1318, 1374
BseCI ATCGAT 1 cut(s) 993
BseDI CCNNGG 3 cut(s) 1192, 1435, 1596
BseGI GGATG 5 cut(s) 60, 764, 1301, 1670, 2076
BseLI CCNNNNNNNGG 5 cut(s) 310, 593, 1949, 2101, 2261
BseMI GCAATG 2 cut(s) 104, 1407
BseMII CTCAG 8 cut(s) 247, 264, 1112, 1293, 1604, 1715, 1835, 2111
BseNI ACTGG 4 cut(s) 732, 1072, 1641, 2266
BseRI GAGGAG 2 cut(s) 1066, 1869
BseXI GCAGC 4 cut(s) 213, 249, 267, 879
BseYI CCCAGC 1 cut(s) 93
Bsh1236I CGCG 1 cut(s) 1080
BshFI GGCC 5 cut(s) 314, 1608, 1731, 1876, 2205
BshNI GGYRCC 1 cut(s) 1313
BshVI ATCGAT 1 cut(s) 993
BsiSI CCGG 4 cut(s) 315, 425, 578, 647
BslFI GGGAC 1 cut(s) 818
BslI CCNNNNNNNGG 5 cut(s) 310, 593, 1949, 2101, 2261
BsmAI GTCTC 5 cut(s) 476, 876, 1103, 1298, 1786
BsmFI GGGAC 1 cut(s) 818
BsnI GGCC 5 cut(s) 314, 1608, 1731, 1876, 2205
Bso31I GGTCTC 1 cut(s) 1298
Bsp143I GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
BspACI CCGC 4 cut(s) 66, 1078, 1396, 1728
BspANI GGCC 5 cut(s) 314, 1608, 1731, 1876, 2205
BspCNI CTCAG 8 cut(s) 246, 263, 1113, 1294, 1605, 1716, 1834, 2110
BspDI ATCGAT 1 cut(s) 993
BspFNI CGCG 1 cut(s) 1080
BspLI GGNNCC 7 cut(s) 429, 571, 1288, 1315, 1808, 1875, 2252
BspMAI CTGCAG 1 cut(s) 897
BspPI GGATC 6 cut(s) 604, 1078, 1263, 1533, 1801, 1814
BspQI GCTCTTC 1 cut(s) 340
BspT107I GGYRCC 1 cut(s) 1313
BspTNI GGTCTC 1 cut(s) 1298
BsrBI CCGCTC 1 cut(s) 1728
BsrDI GCAATG 2 cut(s) 104, 1407
BsrI ACTGG 4 cut(s) 732, 1072, 1641, 2266
BssECI CCNNGG 3 cut(s) 1192, 1435, 1596
BssMI GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
BssT1I CCWWGG 3 cut(s) 1192, 1435, 1596
Bst2UI CCWGG 3 cut(s) 954, 1318, 1374
Bst4CI ACNGT 4 cut(s) 49, 534, 1355, 1746
Bst6I CTCTTC 1 cut(s) 340
BstC8I GCNNGC 2 cut(s) 363, 1398
BstF5I GGATG 5 cut(s) 60, 764, 1301, 1670, 2076
BstFNI CGCG 1 cut(s) 1080
BstKTI GATC 7 cut(s) 599, 993, 1073, 1271, 1528, 1619, 1809
BstMAI GTCTC 5 cut(s) 476, 876, 1103, 1298, 1786
BstMBI GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
BstMWI GCNNNNNNNGC 1 cut(s) 1499
BstNI CCWGG 3 cut(s) 954, 1318, 1374
BstNSI RCATGY 3 cut(s) 1628, 2001, 2135
BstSCI CCNGG 4 cut(s) 314, 952, 1316, 1372
BstSFI CTRYAG 2 cut(s) 530, 893
BstUI CGCG 1 cut(s) 1080
BstV1I GCAGC 4 cut(s) 213, 249, 267, 879
BstV2I GAAGAC 1 cut(s) 1241
BstX2I RGATCY 4 cut(s) 596, 1070, 1525, 1806
BstXI CCANNNNNNTGG 1 cut(s) 1603
BstYI RGATCY 4 cut(s) 596, 1070, 1525, 1806
Bsu15I ATCGAT 1 cut(s) 993
BsuI GTATCC 1 cut(s) 1885
BsuRI GGCC 5 cut(s) 314, 1608, 1731, 1876, 2205
BsuTUI ATCGAT 1 cut(s) 993
BtsCI GGATG 5 cut(s) 60, 764, 1301, 1670, 2076
BtsIMutI CAGTG 2 cut(s) 45, 725
Cac8I GCNNGC 2 cut(s) 363, 1398
CaiI CAGNNNCTG 1 cut(s) 81
Cfr13I GGNCC 4 cut(s) 422, 1286, 1606, 1874
ClaI ATCGAT 1 cut(s) 993
CsiI ACCWGGT 2 cut(s) 1316, 1372
Csp6I GTAC 3 cut(s) 168, 1377, 2259
CviAII CATG 9 cut(s) 156, 566, 1249, 1392, 1625, 1684, 1998, 2132, 2239
CviQI GTAC 3 cut(s) 168, 1377, 2259
DpnI GATC 7 cut(s) 598, 992, 1072, 1270, 1527, 1618, 1808
DpnII GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
EaeI YGGCCR 2 cut(s) 312, 1729
Eam1104I CTCTTC 1 cut(s) 340
EarI CTCTTC 1 cut(s) 340
Eco130I CCWWGG 3 cut(s) 1192, 1435, 1596
Eco31I GGTCTC 1 cut(s) 1298
Eco47I GGWCC 2 cut(s) 422, 1286
Eco57I CTGAAG 1 cut(s) 281
EcoO109I RGGNCCY 1 cut(s) 1874
EcoRI GAATTC 2 cut(s) 160, 1945
EcoRII CCWGG 3 cut(s) 952, 1316, 1372
EcoT14I CCWWGG 3 cut(s) 1192, 1435, 1596
ErhI CCWWGG 3 cut(s) 1192, 1435, 1596
FaeI CATG 9 cut(s) 159, 569, 1252, 1395, 1628, 1687, 2001, 2135, 2242
FalI AAGNNNNNCTT 2 cut(s) 1537, 1569
FaqI GGGAC 1 cut(s) 818
FatI CATG 9 cut(s) 155, 565, 1248, 1391, 1624, 1683, 1997, 2131, 2238
FauI CCCGC 2 cut(s) 73, 1389
Fnu4HI GCNGC 5 cut(s) 202, 238, 256, 893, 1729
FokI GGATG 5 cut(s) 47, 751, 1308, 1657, 2063
Fsp4HI GCNGC 5 cut(s) 202, 238, 256, 893, 1729
FspBI CTAG 4 cut(s) 780, 1115, 1160, 1517
GluI GCNGC 5 cut(s) 202, 238, 256, 893, 1729
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 1 cut(s) 1971
HaeIII GGCC 5 cut(s) 314, 1608, 1731, 1876, 2205
HapII CCGG 4 cut(s) 315, 425, 578, 647
Hin1II CATG 9 cut(s) 159, 569, 1252, 1395, 1628, 1687, 2001, 2135, 2242
HincII GTYRAC 3 cut(s) 262, 541, 1023
HindII GTYRAC 3 cut(s) 262, 541, 1023
HindIII AAGCTT 6 cut(s) 359, 454, 818, 1174, 1325, 1546
HpaII CCGG 4 cut(s) 315, 425, 578, 647
HphI GGTGA 2 cut(s) 1376, 2195
Hpy166II GTNNAC 5 cut(s) 73, 262, 541, 1023, 2137
Hpy8I GTNNAC 5 cut(s) 73, 262, 541, 1023, 2137
Hpy99I CGWCG 3 cut(s) 1921, 2021, 2222
HpyAV CCTTC 4 cut(s) 534, 1088, 1797, 2121
HpyCH4III ACNGT 4 cut(s) 49, 534, 1355, 1746
HpyCH4IV ACGT 4 cut(s) 392, 543, 901, 1919
HpyCH4V TGCA 9 cut(s) 84, 201, 350, 365, 699, 895, 1493, 1751, 2037
HpyF10VI GCNNNNNNNGC 1 cut(s) 1499
HpySE526I ACGT 4 cut(s) 392, 543, 901, 1919
Hsp92II CATG 9 cut(s) 159, 569, 1252, 1395, 1628, 1687, 2001, 2135, 2242
Kzo9I GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
LguI GCTCTTC 1 cut(s) 340
LmnI GCTCC 5 cut(s) 114, 494, 629, 710, 979
Lsp1109I GCAGC 4 cut(s) 213, 249, 267, 879
LweI GCATC 2 cut(s) 1204, 1480
MabI ACCWGGT 2 cut(s) 1316, 1372
MaeI CTAG 4 cut(s) 780, 1115, 1160, 1517
MaeII ACGT 4 cut(s) 392, 543, 901, 1919
MalI GATC 7 cut(s) 598, 992, 1072, 1270, 1527, 1618, 1808
MbiI CCGCTC 1 cut(s) 1728
MboI GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
MboII GAAGA 7 cut(s) 132, 287, 327, 1020, 1246, 2189, 2209
MfeI CAATTG 3 cut(s) 351, 743, 1165
MflI RGATCY 4 cut(s) 596, 1070, 1525, 1806
MlyI GAGTC 5 cut(s) 478, 644, 648, 1105, 1706
MmeI TCCRAC 5 cut(s) 307, 385, 792, 1296, 1940
MroXI GAANNNNTTC 2 cut(s) 294, 323
MspA1I CMGCKG 1 cut(s) 2101
MspI CCGG 4 cut(s) 315, 425, 578, 647
MspR9I CCNGG 4 cut(s) 316, 954, 1318, 1374
MunI CAATTG 3 cut(s) 351, 743, 1165
MvaI CCWGG 3 cut(s) 954, 1318, 1374
MvnI CGCG 1 cut(s) 1080
MwoI GCNNNNNNNGC 1 cut(s) 1499
NciI CCSGG 1 cut(s) 316
NdeII GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
NlaIII CATG 9 cut(s) 159, 569, 1252, 1395, 1628, 1687, 2001, 2135, 2242
NlaIV GGNNCC 7 cut(s) 429, 571, 1288, 1315, 1808, 1875, 2252
NmuCI GTSAC 4 cut(s) 482, 723, 1449, 2022
NspI RCATGY 3 cut(s) 1628, 2001, 2135
PciI ACATGT 2 cut(s) 1624, 1997
PciSI GCTCTTC 1 cut(s) 340
PcsI WCGNNNNNNNCGW 1 cut(s) 2226
PdmI GAANNNNTTC 2 cut(s) 294, 323
PfeI GAWTC 5 cut(s) 131, 137, 380, 1197, 2112
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 5 cut(s) 203, 239, 257, 894, 1730
PleI GAGTC 5 cut(s) 477, 644, 647, 1105, 1705
PpsI GAGTC 5 cut(s) 477, 644, 647, 1105, 1705
PscI ACATGT 2 cut(s) 1624, 1997
PshBI ATTAAT 1 cut(s) 789
PsiI TTATAA 1 cut(s) 552
Psp6I CCWGG 3 cut(s) 952, 1316, 1372
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 3 cut(s) 952, 1316, 1372
PspN4I GGNNCC 7 cut(s) 429, 571, 1288, 1315, 1808, 1875, 2252
PspPI GGNCC 4 cut(s) 422, 1286, 1606, 1874
PstI CTGCAG 1 cut(s) 897
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 4 cut(s) 596, 1070, 1525, 1806
PvuII CAGCTG 1 cut(s) 2101
RsaI GTAC 3 cut(s) 169, 1378, 2260
RsaNI GTAC 3 cut(s) 168, 1377, 2259
SapI GCTCTTC 1 cut(s) 340
SatI GCNGC 5 cut(s) 202, 238, 256, 893, 1729
Sau3AI GATC 7 cut(s) 596, 990, 1070, 1268, 1525, 1616, 1806
Sau96I GGNCC 4 cut(s) 422, 1286, 1606, 1874
SchI GAGTC 5 cut(s) 478, 644, 648, 1105, 1706
ScrFI CCNGG 4 cut(s) 316, 954, 1318, 1374
SexAI ACCWGGT 2 cut(s) 1316, 1372
SfaNI GCATC 2 cut(s) 1204, 1480
SfcI CTRYAG 2 cut(s) 530, 893
SinI GGWCC 2 cut(s) 422, 1286
SmlI CTYRAG 3 cut(s) 466, 821, 1933
SmoI CTYRAG 3 cut(s) 466, 821, 1933
SpeI ACTAGT 1 cut(s) 1159
SsiI CCGC 4 cut(s) 66, 1078, 1396, 1728
SspI AATATT 2 cut(s) 399, 949
SspMI CTAG 4 cut(s) 780, 1115, 1160, 1517
StyD4I CCNGG 4 cut(s) 314, 952, 1316, 1372
StyI CCWWGG 3 cut(s) 1192, 1435, 1596
TaaI ACNGT 4 cut(s) 49, 534, 1355, 1746
TaiI ACGT 4 cut(s) 395, 546, 904, 1922
TaqI TCGA 9 cut(s) 164, 603, 936, 971, 993, 1322, 1556, 1829, 1851
TaqII GACCGA 2 cut(s) 212, 1440
TatI WGTACW 1 cut(s) 2258
TauI GCSGC 1 cut(s) 1731
TfiI GAWTC 5 cut(s) 131, 137, 380, 1197, 2112
TscAI CASTG 2 cut(s) 52, 732
TseFI GTSAC 4 cut(s) 482, 723, 1449, 2022
TseI GCWGC 4 cut(s) 201, 237, 255, 892
Tsp45I GTSAC 4 cut(s) 482, 723, 1449, 2022
TspDTI ATGAA 2 cut(s) 554, 2190
TspGWI ACGGA 1 cut(s) 1599
TspRI CASTG 2 cut(s) 52, 732
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 2 cut(s) 422, 1286
VspI ATTAAT 1 cut(s) 789
XapI RAATTY 9 cut(s) 160, 367, 434, 938, 1277, 1463, 1534, 1734, 1945
XbaI TCTAGA 1 cut(s) 1516
XceI RCATGY 3 cut(s) 1628, 2001, 2135
XcmI CCANNNNNNNNNTGG 1 cut(s) 397
XmnI GAANNNNTTC 2 cut(s) 294, 323
XspI CTAG 4 cut(s) 780, 1115, 1160, 1517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.