Rw3G019560

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
22456231 .. 22458879
2649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019560.1

Sequence Viewer

Length: 2649 bp
ATGTTGTCAAGCATATATATTTCAAATTGCAATTTCGCTGGATCAGTTCCCAAGTCGATTAGAAACCTCACACAGTTGGCTGACCTGGACATGTCAGGGAACAGATTTAATAGTCCCATTAGTTCTATTCACTGGGAAACCCTTGTTAATCTAGAAACCCTCTATTTGAGTGACAATCAACTCTATGGGACTATTCCTTCATCAGTTTTTTCTCTTCCCAAACTGGAAACAGTAAGTCTATCCCACAATCGGTTCTCGGGTCAAGTCCCTGAATTTTCCAATACCTCTTCGCCCTTACTTGAGAGTCTTTATTTGGAAAACAACAATTTGGAAGGACAAATACCAACATCCATCTTCAATCTTCAAAGGCTTGAGGATCTTGATCTTTCTTCAAACAACTTCAGTAGCTTCCCTTTTTGTGGTCCTCAAGTGCCCAGAAAGCTTTCATTGGTTGATCTTTCCCACAATAGCTTGTTGTTTGATTACAATGGCACCAATTCCTCCTTCCTTCAGATTGACTATTTGGTATTGGCTTCTAACAAGTTGAGAGCATTCCCAGATTTCTTGAGAAACCAAATCACACTTAATATTTCGGATTTGGACCTTTCAGGAAACCAGATCCAAGGCCAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTACTTCCCTTGATCTTTCTGGCAACTCCTTGGTAACTCTAGAAGCTCCTCCTCCTAATTCCACTTATGCTTTATCTTCTCTAGACCTTCATTCCAACAAGTTGAGAGCATTCCCAGATTTCTTGAGAAATCAGTCCACATTATACAGCTTGGACCTTTCAAACAACCAGATTCAAGGCGAGATACCAAATTGGATTTTGAGTCTCAAATCTCTTAGTTCCCTGGATCTTTCTTGCAACTCCTTGGTAACTCTAGAAGCTCCTCCTCCTAATTCCACTTATGCTTTATCTTATCTAGACCTTCATTCCAACAAGCTTCAAGGTATCCATTCCTCATATTCCTTCCTTCAGCTTCGCTCCCTGTCATTAGCTTCTAACAAGTTGACAACATTCCCAGACTTCTTGAGAAATCAATCCCATTTAATCAACTTGGACCTCTCAGACAACCAAATTCAAGGACATATACCCAATTGGATTTGGAGTCTCAAACTTCAAGAACTAAATCTTTCTTATAACTCCTTGGAAAGTTTAGAAGCCCCTCCACTTAATTCTAGCTATGTTCTGCTATCGATTGATCTTCATTCAAACCAGCTTCAGGGACATTTCCCCTTGTTCTTAAGTAGTAGGTATCTAGATTATTCAAGAAATAATTTCACCTCTAGTATACCGACTGACATTGGTGACTTCATTTCTAGTTGGTCTTACCTTTTTCTTTCAAGCAATAACTTTCACGGGGCCATTCCTAAATCAATATGCAATGCAAGGGGTACGGTTCTTGATCTGTCCAATAATTCCTTAAGTGGAAACATTCCCCAATGCTTGACTCAATTACCTCAGCTTTCGGTCATTGATTTGAAGAGAAACAACCTGAGTGGCACAATTCCGGATAATTTTTTCAACATTTGTGAGCTACAAACTCTGGACCTCAGTAACAATCAGATACAAGGCAAGTTTCCGAAATCTCTTGCCAACTGCTCAAAGTTAGAGGTTTTAAACATTGGAAACAATAACATAGCTGATACTTTTCCATGCTTTTTAATGAGCTTATCCACCTTGCGTATCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAACATTGGATGTCCCAAGACCAGTGGCACATGGCCTGTGCTTCAAATAATAGATTTAGCTCACAACAATTTTAGTGGTGATATGCCAGGAAGAATGTCTCTGACATGGCAGGCTATGGTGTCTAATGAGGATGATTCTCCCACTGAACTTGGATTTTCTTATCCGATGTGCAATACATATGATAGAGGTTGTCCTGAAATTCCTGGCGGTTATTATAAAGATGCAATTACGACTATTATCAAAGGTTTAGAGTGGGATGTGGTTAAGATTTTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAATGGATCAATACCTGAGGAAATTGGAGAGTTGAAATCACTATATGTCCTAAACTTATCAGGTAATGCTTTCACCGGAAAAATCCCATCATCATTTGGTAAGATGCAGCGATTGGAGTCCTTAGATCTCTCAAAGAACCACTTGAGCGGCCACATTCCCCCTGAGTTTGCAAATCTCAATTTCCTTTCGCACTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAACACTCAGTTTTCGACATTTCCAAGTACCTCCTTCGAGGGTAATAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAGCAATCGTATTGCCACCTCCAAAGTTTAATGGAAGCCCAAGTAATCAGAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTCTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGAGCCATGTTTAACATCCTGTTCAAGATATTCCCAAAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

882

Amino Acids

98.77

Weight (kDa)

6.07

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_4 PF12799 50 - 91 5.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 73 - 134 3.8e-06 Leucine rich repeat
LRR_8 PF13855 173 - 231 6.5e-06 Leucine rich repeat
LRR_8 PF13855 245 - 302 6.2e-06 Leucine rich repeat
LRR_8 PF13855 291 - 348 4.6e-07 Leucine rich repeat
LRR_8 PF13855 337 - 394 2.1e-07 Leucine rich repeat
LRR_8 PF13855 477 - 534 1.3e-07 Leucine rich repeat
LRR_8 PF13855 523 - 582 8.8e-08 Leucine rich repeat
LRR_4 PF12799 523 - 560 8.9e-08 Leucine Rich repeats (2 copies)
LRR_14 PF23598 691 - 755 2.7e-06 Leucine-rich repeat region
LRR_8 PF13855 701 - 760 4.6e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1173, 1968
AccB1I GGYRCC 1 cut(s) 491
AccBSI CCGCTC 1 cut(s) 2211
AccI GTMKAC 1 cut(s) 1324
AccIII TCCGGA 1 cut(s) 1543
AciI CCGC 3 cut(s) 1732, 1959, 2211
AclWI GGATC 7 cut(s) 49, 384, 613, 894, 2077, 2284, 2297
AcoI YGGCCR 1 cut(s) 2212
AcsI RAATTY 5 cut(s) 272, 1110, 1950, 2060, 2428
AcuI CTGAAG 4 cut(s) 385, 494, 992, 1238
AfaI GTAC 3 cut(s) 1429, 2326, 2540
AfiI CCNNNNNNNGG 4 cut(s) 249, 419, 1255, 2584
AflII CTTAAG 2 cut(s) 1276, 1456
AflIII ACRYGT 2 cut(s) 90, 2480
AjnI CCWGG 4 cut(s) 84, 882, 1837, 1954
AjuI GAANNNNNNNTTGG 4 cut(s) 488, 520, 2580, 2612
Alw26I GTCTC 6 cut(s) 656, 869, 1148, 1854, 2269, 2635
AlwI GGATC 7 cut(s) 49, 384, 613, 894, 2077, 2284, 2297
Ama87I CYCGRG 1 cut(s) 256
Aor13HI TCCGGA 1 cut(s) 1543
AoxI GGCC 5 cut(s) 625, 1395, 1784, 2212, 2357
ApeKI GCWGC 1 cut(s) 2170
ApoI RAATTY 5 cut(s) 272, 1110, 1950, 2060, 2428
Asp700I GAANNNNTTC 1 cut(s) 442
AspS9I GGNCC 8 cut(s) 422, 601, 814, 1093, 1395, 1582, 1734, 2357
AsuHPI GGTGA 5 cut(s) 1306, 1352, 1841, 2026, 2128
AvaI CYCGRG 1 cut(s) 256
AvaII GGWCC 6 cut(s) 422, 601, 814, 1093, 1582, 1734
AxyI CCTNAGG 1 cut(s) 2079
BaeGI GKGCMC 1 cut(s) 435
BamHI GGATCC 1 cut(s) 2289
BanI GGYRCC 1 cut(s) 491
BarI GAAGNNNNNNTAC 2 cut(s) 324, 356
BbvCI CCTCAGC 1 cut(s) 1494
BbvI GCAGC 1 cut(s) 2182
BccI CCATC 3 cut(s) 359, 2158, 2520
BceAI ACGGC 1 cut(s) 2483
BciT130I CCWGG 4 cut(s) 86, 884, 1839, 1956
BciVI GTATCC 3 cut(s) 995, 1730, 2368
BcoDI GTCTC 6 cut(s) 656, 869, 1148, 1854, 2269, 2635
BfaI CTAG 9 cut(s) 152, 701, 743, 914, 956, 1212, 1292, 1320, 1353
BfmI CTRYAG 1 cut(s) 2542
BfrI CTTAAG 2 cut(s) 1276, 1456
BfuI GTATCC 3 cut(s) 995, 1730, 2368
BglII AGATCT 1 cut(s) 2188
BisI GCNGC 2 cut(s) 2171, 2212
BlsI GCNGC 2 cut(s) 2172, 2213
Bme1390I CCNGG 4 cut(s) 86, 884, 1839, 1956
Bme18I GGWCC 6 cut(s) 422, 601, 814, 1093, 1582, 1734
BmeT110I CYCGRG 1 cut(s) 256
BmgT120I GGNCC 8 cut(s) 422, 601, 814, 1093, 1395, 1582, 1734, 2357
BmiI GGNNCC 4 cut(s) 493, 1396, 2291, 2358
BmrFI CCNGG 4 cut(s) 86, 884, 1839, 1956
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 2 cut(s) 1963, 2157
BmuI ACTGGG 1 cut(s) 142
BpmI CTGGAG 1 cut(s) 2454
Bpu10I CCTNAGC 1 cut(s) 1494
BpuEI CTTGAG 7 cut(s) 320, 392, 411, 586, 805, 1084, 2227
Bsa29I ATCGAT 1 cut(s) 1229
BsaBI GATNNNNATC 1 cut(s) 381
BsaJI CCNNGG 5 cut(s) 622, 690, 882, 903, 1179
BsaWI WCCGGW 2 cut(s) 1543, 2138
BsaXI ACNNNNNCTCC 2 cut(s) 2036, 2066
Bsc4I CCNNNNNNNGG 4 cut(s) 249, 419, 1255, 2584
Bse1I ACTGG 3 cut(s) 137, 228, 1773
Bse21I CCTNAGG 1 cut(s) 2079
Bse3DI GCAATG 1 cut(s) 1423
Bse8I GATNNNNATC 1 cut(s) 381
BseAI TCCGGA 1 cut(s) 1543
BseBI CCWGG 4 cut(s) 86, 884, 1839, 1956
BseCI ATCGAT 1 cut(s) 1229
BseDI CCNNGG 5 cut(s) 622, 690, 882, 903, 1179
BseGI GGATG 5 cut(s) 347, 1766, 1888, 2014, 2559
BseJI GATNNNNATC 1 cut(s) 381
BseLI CCNNNNNNNGG 4 cut(s) 249, 419, 1255, 2584
BseMI GCAATG 1 cut(s) 1423
BseMII CTCAG 7 cut(s) 1113, 1508, 1520, 1600, 2070, 2217, 2318
BseNI ACTGG 3 cut(s) 137, 228, 1773
BseRI GAGGAG 6 cut(s) 699, 702, 912, 915, 2041, 2352
BseSI GKGCMC 1 cut(s) 435
BseXI GCAGC 1 cut(s) 2182
BshFI GGCC 5 cut(s) 627, 1397, 1786, 2214, 2359
BshNI GGYRCC 1 cut(s) 491
BshVI ATCGAT 1 cut(s) 1229
BsiHKCI CYCGRG 1 cut(s) 256
BsiSI CCGG 2 cut(s) 1544, 2139
BslFI GGGAC 5 cut(s) 99, 202, 251, 1272, 1749
BslI CCNNNNNNNGG 4 cut(s) 249, 419, 1255, 2584
BsmAI GTCTC 6 cut(s) 656, 869, 1148, 1854, 2269, 2635
BsmBI CGTCTC 1 cut(s) 2635
BsmFI GGGAC 5 cut(s) 99, 202, 251, 1272, 1749
BsmI GAATGC 2 cut(s) 551, 770
BsnI GGCC 5 cut(s) 627, 1397, 1786, 2214, 2359
BsoBI CYCGRG 1 cut(s) 256
Bsp1286I GDGCHC 1 cut(s) 435
Bsp13I TCCGGA 1 cut(s) 1543
BspACI CCGC 3 cut(s) 1732, 1959, 2211
BspANI GGCC 5 cut(s) 627, 1397, 1786, 2214, 2359
BspCNI CTCAG 7 cut(s) 1112, 1507, 1521, 1599, 2071, 2218, 2317
BspDI ATCGAT 1 cut(s) 1229
BspEI TCCGGA 1 cut(s) 1543
BspLI GGNNCC 4 cut(s) 493, 1396, 2291, 2358
BspPI GGATC 7 cut(s) 49, 384, 613, 894, 2077, 2284, 2297
BspT107I GGYRCC 1 cut(s) 491
BspTI CTTAAG 2 cut(s) 1276, 1456
BsrBI CCGCTC 1 cut(s) 2211
BsrDI GCAATG 1 cut(s) 1423
BsrI ACTGG 3 cut(s) 137, 228, 1773
BssECI CCNNGG 5 cut(s) 622, 690, 882, 903, 1179
BssNAI GTATAC 1 cut(s) 1325
BssT1I CCWWGG 4 cut(s) 622, 690, 903, 1179
Bst1107I GTATAC 1 cut(s) 1325
Bst2UI CCWGG 4 cut(s) 86, 884, 1839, 1956
Bst4CI ACNGT 3 cut(s) 75, 232, 1432
Bst6I CTCTTC 3 cut(s) 219, 292, 1511
BstAFI CTTAAG 2 cut(s) 1276, 1456
BstC8I GCNNGC 1 cut(s) 1863
BstDEI CTNAG 9 cut(s) 875, 1099, 1494, 1529, 1586, 2079, 2185, 2226, 2304
BstF5I GGATG 5 cut(s) 347, 1766, 1888, 2014, 2559
BstMAI GTCTC 6 cut(s) 656, 869, 1148, 1854, 2269, 2635
BstMWI GCNNNNNNNGC 1 cut(s) 439
BstNI CCWGG 4 cut(s) 86, 884, 1839, 1956
BstNSI RCATGY 3 cut(s) 94, 2484, 2618
BstSCI CCNGG 4 cut(s) 84, 882, 1837, 1954
BstSFI CTRYAG 1 cut(s) 2542
BstSLI GKGCMC 1 cut(s) 435
BstV1I GCAGC 1 cut(s) 2182
BstX2I RGATCY 5 cut(s) 376, 618, 886, 2188, 2289
BstYI RGATCY 5 cut(s) 376, 618, 886, 2188, 2289
BstZ17I GTATAC 1 cut(s) 1325
Bsu15I ATCGAT 1 cut(s) 1229
Bsu36I CCTNAGG 1 cut(s) 2079
BsuI GTATCC 3 cut(s) 995, 1730, 2368
BsuRI GGCC 5 cut(s) 627, 1397, 1786, 2214, 2359
BsuTUI ATCGAT 1 cut(s) 1229
BtsCI GGATG 5 cut(s) 347, 1766, 1888, 2014, 2559
BtsIMutI CAGTG 4 cut(s) 130, 1780, 1893, 2467
Cac8I GCNNGC 1 cut(s) 1863
Cfr13I GGNCC 8 cut(s) 422, 601, 814, 1093, 1395, 1582, 1734, 2357
ClaI ATCGAT 1 cut(s) 1229
Csp6I GTAC 3 cut(s) 1428, 2325, 2539
CspCI CAANNNNNGTGG 8 cut(s) 1513, 1548, 1756, 1791, 1807, 1842, 1882, 1917
CviAII CATG 7 cut(s) 91, 1689, 1782, 1857, 2481, 2551, 2615
CviQI GTAC 3 cut(s) 1428, 2325, 2539
DdeI CTNAG 9 cut(s) 875, 1099, 1494, 1529, 1586, 2079, 2185, 2226, 2304
DraI TTTAAA 1 cut(s) 1653
EaeI YGGCCR 1 cut(s) 2212
Eam1104I CTCTTC 3 cut(s) 219, 292, 1511
EarI CTCTTC 3 cut(s) 219, 292, 1511
Eco130I CCWWGG 4 cut(s) 622, 690, 903, 1179
Eco47I GGWCC 6 cut(s) 422, 601, 814, 1093, 1582, 1734
Eco57I CTGAAG 4 cut(s) 385, 494, 992, 1238
Eco81I CCTNAGG 1 cut(s) 2079
Eco88I CYCGRG 1 cut(s) 256
EcoO109I RGGNCCY 1 cut(s) 2357
EcoRI GAATTC 1 cut(s) 2428
EcoRII CCWGG 4 cut(s) 84, 882, 1837, 1954
EcoT14I CCWWGG 4 cut(s) 622, 690, 903, 1179
ErhI CCWWGG 4 cut(s) 622, 690, 903, 1179
Esp3I CGTCTC 1 cut(s) 2635
FaeI CATG 7 cut(s) 94, 1692, 1785, 1860, 2484, 2554, 2618
FalI AAGNNNNNCTT 2 cut(s) 2189, 2221
FaqI GGGAC 5 cut(s) 99, 202, 251, 1272, 1749
FatI CATG 7 cut(s) 90, 1688, 1781, 1856, 2480, 2550, 2614
FauNDI CATATG 1 cut(s) 1930
FblI GTMKAC 1 cut(s) 1324
Fnu4HI GCNGC 2 cut(s) 2171, 2212
FokI GGATG 5 cut(s) 334, 1773, 1895, 2021, 2546
Fsp4HI GCNGC 2 cut(s) 2171, 2212
FspBI CTAG 9 cut(s) 152, 701, 743, 914, 956, 1212, 1292, 1320, 1353
GluI GCNGC 2 cut(s) 2171, 2212
GsuI CTGGAG 1 cut(s) 2454
HaeIII GGCC 5 cut(s) 627, 1397, 1786, 2214, 2359
HapII CCGG 2 cut(s) 1544, 2139
Hin1II CATG 7 cut(s) 94, 1692, 1785, 1860, 2484, 2554, 2618
HincII GTYRAC 1 cut(s) 1044
HindII GTYRAC 1 cut(s) 1044
HindIII AAGCTT 2 cut(s) 440, 974
HinfI GANTC 8 cut(s) 304, 649, 832, 862, 1141, 1483, 1886, 2180
HpaII CCGG 2 cut(s) 1544, 2139
HphI GGTGA 5 cut(s) 1306, 1352, 1841, 2026, 2128
Hpy166II GTNNAC 4 cut(s) 798, 1044, 1325, 2620
Hpy8I GTNNAC 4 cut(s) 798, 1044, 1325, 2620
Hpy99I CGWCG 1 cut(s) 2504
HpyCH4III ACNGT 3 cut(s) 75, 232, 1432
HpyCH4IV ACGT 1 cut(s) 2644
HpyCH4V TGCA 9 cut(s) 30, 897, 1416, 1421, 1923, 1976, 2170, 2234, 2520
HpyF10VI GCNNNNNNNGC 1 cut(s) 439
HpyF3I CTNAG 9 cut(s) 875, 1099, 1494, 1529, 1586, 2079, 2185, 2226, 2304
HpySE526I ACGT 1 cut(s) 2644
Hsp92II CATG 7 cut(s) 94, 1692, 1785, 1860, 2484, 2554, 2618
Kpn2I TCCGGA 1 cut(s) 1543
LmnI GCTCC 3 cut(s) 712, 925, 1022
Lsp1109I GCAGC 1 cut(s) 2182
LweI GCATC 2 cut(s) 1963, 2157
MaeI CTAG 9 cut(s) 152, 701, 743, 914, 956, 1212, 1292, 1320, 1353
MaeII ACGT 1 cut(s) 2644
MaeIII GTNAC 6 cut(s) 170, 694, 907, 1340, 1589, 2505
MbiI CCGCTC 1 cut(s) 2211
MboII GAAGA 9 cut(s) 206, 279, 346, 353, 381, 729, 1229, 1528, 1854
MfeI CAATTG 1 cut(s) 1129
MflI RGATCY 5 cut(s) 376, 618, 886, 2188, 2289
MhlI GDGCHC 1 cut(s) 435
MlyI GAGTC 6 cut(s) 313, 658, 871, 1150, 1477, 2189
MmeI TCCRAC 4 cut(s) 780, 993, 1761, 2079
MroI TCCGGA 1 cut(s) 1543
MroXI GAANNNNTTC 1 cut(s) 442
MslI CAYNNNNRTG 1 cut(s) 2259
MspCI CTTAAG 2 cut(s) 1276, 1456
MspI CCGG 2 cut(s) 1544, 2139
MspR9I CCNGG 4 cut(s) 86, 884, 1839, 1956
MunI CAATTG 1 cut(s) 1129
Mva1269I GAATGC 2 cut(s) 551, 770
MvaI CCWGG 4 cut(s) 86, 884, 1839, 1956
MwoI GCNNNNNNNGC 1 cut(s) 439
NdeI CATATG 1 cut(s) 1930
NlaIII CATG 7 cut(s) 94, 1692, 1785, 1860, 2484, 2554, 2618
NlaIV GGNNCC 4 cut(s) 493, 1396, 2291, 2358
NmuCI GTSAC 3 cut(s) 170, 1340, 2505
NspI RCATGY 3 cut(s) 94, 2484, 2618
PciI ACATGT 2 cut(s) 90, 2480
PctI GAATGC 2 cut(s) 551, 770
PdmI GAANNNNTTC 1 cut(s) 442
PfeI GAWTC 2 cut(s) 832, 1886
PkrI GCNGC 2 cut(s) 2172, 2213
PleI GAGTC 6 cut(s) 312, 657, 870, 1149, 1477, 2188
PpsI GAGTC 6 cut(s) 312, 657, 870, 1149, 1477, 2188
PscI ACATGT 2 cut(s) 90, 2480
PsiI TTATAA 2 cut(s) 1173, 1968
Psp6I CCWGG 4 cut(s) 84, 882, 1837, 1954
PspGI CCWGG 4 cut(s) 84, 882, 1837, 1954
PspN4I GGNNCC 4 cut(s) 493, 1396, 2291, 2358
PspPI GGNCC 8 cut(s) 422, 601, 814, 1093, 1395, 1582, 1734, 2357
PsuI RGATCY 5 cut(s) 376, 618, 886, 2188, 2289
RsaI GTAC 3 cut(s) 1429, 2326, 2540
RsaNI GTAC 3 cut(s) 1428, 2325, 2539
RseI CAYNNNNRTG 1 cut(s) 2259
SatI GCNGC 2 cut(s) 2171, 2212
Sau96I GGNCC 8 cut(s) 422, 601, 814, 1093, 1395, 1582, 1734, 2357
SchI GAGTC 6 cut(s) 313, 658, 871, 1150, 1477, 2189
ScrFI CCNGG 4 cut(s) 86, 884, 1839, 1956
SduI GDGCHC 1 cut(s) 435
SfaNI GCATC 2 cut(s) 1963, 2157
SfcI CTRYAG 1 cut(s) 2542
SinI GGWCC 6 cut(s) 422, 601, 814, 1093, 1582, 1734
SmiMI CAYNNNNRTG 1 cut(s) 2259
SmlI CTYRAG 9 cut(s) 299, 371, 426, 565, 784, 1063, 1276, 1456, 2206
SmoI CTYRAG 9 cut(s) 299, 371, 426, 565, 784, 1063, 1276, 1456, 2206
SsiI CCGC 3 cut(s) 1732, 1959, 2211
SspI AATATT 1 cut(s) 589
SspMI CTAG 9 cut(s) 152, 701, 743, 914, 956, 1212, 1292, 1320, 1353
StyD4I CCNGG 4 cut(s) 84, 882, 1837, 1954
StyI CCWWGG 4 cut(s) 622, 690, 903, 1179
TaaI ACNGT 3 cut(s) 75, 232, 1432
TaiI ACGT 1 cut(s) 2647
TaqI TCGA 4 cut(s) 56, 1229, 2312, 2334
TaqII GACCGA 1 cut(s) 1492
TauI GCSGC 1 cut(s) 2214
TfiI GAWTC 2 cut(s) 832, 1886
TscAI CASTG 4 cut(s) 137, 1780, 1900, 2467
TseFI GTSAC 3 cut(s) 170, 1340, 2505
TseI GCWGC 1 cut(s) 2170
Tsp45I GTSAC 3 cut(s) 170, 1340, 2505
TspDTI ATGAA 6 cut(s) 189, 435, 740, 953, 1229, 1336
TspRI CASTG 4 cut(s) 137, 1780, 1900, 2467
Vha464I CTTAAG 2 cut(s) 1276, 1456
VpaK11BI GGWCC 6 cut(s) 422, 601, 814, 1093, 1582, 1734
XapI RAATTY 5 cut(s) 272, 1110, 1950, 2060, 2428
XbaI TCTAGA 6 cut(s) 151, 700, 742, 913, 955, 1291
XceI RCATGY 3 cut(s) 94, 2484, 2618
XmiI GTMKAC 1 cut(s) 1324
XmnI GAANNNNTTC 1 cut(s) 442
XspI CTAG 9 cut(s) 152, 701, 743, 914, 956, 1212, 1292, 1320, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.