Rw0G003790

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00141
OG0000047
Physical Location & Seq
Reverse (-)
5849 .. 9061
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G003790.1

Sequence Viewer

Length: 3213 bp
ATGCTTTGGTCTCACACAAAAAGAGTTTCAATGACAATTCCTTTGTTCTCATGCCATTTCTTAATACTCATTTACTATGTTTCACTCAGTGTCCTTATACTGGTGGCCTCTGGCCAATGTTCCAGCAATCAGCAGCAATCTTTGTTGCTCCAACTGAAGAACAGCCTGAATTTTGAGCCTGCATTATCCACAAAGCTGGTGAAGTGGAACAATGTCTCTGATTATTGTTCTTGGGAAGGTGTCTCCTGCAAAGGAGGTTGTGTTACCCATCTCGACTTGAGCTGGGAATCGATTTCAGGTGGACTTGATAATTCAAGTGCTCTTTTCTGTCTGCAGTACATCGAACACCTGAATTTGGCCTATAATAACTTCAATTGTACTCCGATTCCATCCCAGTTCAACAAGCTAGCCAGTTTGAATTATTTGAATCTGTCAAATGCTGGCTTTTCCGGGCAGATTCCCGTTGAGATTTCGCAGTTGACAAGGTTGGTGTTTCTTGATTTATCTACCTTCTACTTTCCAGGAACTCCTGCACTGCAACTTGAGCATCCAGATTTGAATCTGCTTATTGGAAACCTTTCGGAGATAATCGAACTTCATCTTGATGGTGTGAACATATCAGCACAGGGAGCTCAGTGGGGTCAAGCAATATCATCTTCACTGCCAAAGCTGAGGGTGTTGAGCTTGTCCAGTTGTAATCTTTTAGGCCCTATGGATCCTTCCTTACAGAAGCTCAACTCACTGTCAGAAATTCGTATAGAGCATAATGGCTTGTCTACTCCAGTTCCAGAGTTCTTGTCAAATTTCACAAATTTGACTACCTTAGGCCTCATGAATTCAGGGTTACATGGTACATTCCCAGAGAAGATCTTTCAGGTACCTACACTGCAGATTATCGACTTAATTGGCAATCAAGAGCTACGAGGTTCGTTGCCAGACTTTCCGAAGAATGGAGCTCTTCGGTCCCTGTTCCTAGCCAGGACAGCTTTTTCAGGGTTATTGCCGGAATCTATTGGAAACCTCAAGATGTTGTCCAAAGTAGATCTTTCAACTTGCAGCTTCACGGGACCAATCCCAAAGTCAATGGAAAGCCTTACGGAATTGGTTTATGTGGACATGTCAGCGAACAAGCTTAATGGTTCAGTTCCGTTGTTGAGTATGGCCAAGAATCTGACGGACATAAATCTTTCGCACAATGAGCTAGAAGGTCTGATTAACTCTACTCACTGGCAAAATCTTACAAATCTGGTCAATCTCAACTTGGCTAACAATAAACTGGATGGCAGTATTCCATCGTCTCTATTTAATCTTCCCTCGCTGAAGCAACTACTGCTCTCCAACAATCAGTTCTCTGGTCAGTTGCTTGAATTTTTCAGCATCTCTTCTAACCCTCTTGACACACTTGATTTGAGTAGCAACAACTTGGCAGGGCCAGTACCCAAGTCTATCTTCAATCTCCAACGGCTTAAAATTCTTTCACTTTCTTCAAACAACTTCAGTGGGTACTTCCCACTCAACAGTGTTCAACAGTTCAAAAATCTTTCGAGTCTTGATCTTTCATATAATAGTTTGTTGATTAGTTATAATAGCACCGATTCCTCGCAGTCTTCCTTTCCTCAGATTACCACATTGAAGTTGGCTTCTGGCAAGTTGAGAAAATTCCCTGATTTCTTGAGAAGCCAATCCAAACTATTCACTTTAGATCTTTCACAAAACCAGATTCAGGGAGAGATACCCAACTGGATTTGGAGGCTCAGTCTCAATCACCTAAATCTTTCTTTGAATTCCCTAGTAACTCTAGAGGGTCCTTTCTCCAATCCTGCCTCTAAGTTGACTGTGCTTGACCTTCATTCAAACCAGCTTCAGGGACAAGTCCCAATTTTTTCACTATTTGCCACTTATCTGGATTACTCGAAAAATAATTTCACCTCTAGCATACCGGCTAGCGTTGGTGATTTCCTTAATTTCACTGTTTTCTTGTCTCTTTCAAGCAACAAAATTGAGGGGAGCATTCCAGGATCAATATGCAATGCGTCATATCTTCAGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGCAATATTCCCCAGTGCTTGACTGCAATAAGTGGAAATCTTGTAGTACTTAATTTAAGGAGAAACCAACTTGCTGGGACTCTTCCTGACAGATTTCCTGGCCATTGTAGTCTAAAAACTCTAGACTTCAATGGAAATCGTCTAGAAGGTTTGTTTCCAAAATCTCTAGCCAATTGCACAGTGTTAGAAGTTCTGAACCTTGGAAACAATCAGATAACAGATACATTTCCATGCTTGTTGAAGAGCATCTCCACCTTGCGTGTCCTTGTTTTGCGATCAAACAGATTTTATAGACGCCTTGGATGTCCCAACACCAATGGTACCTGGCCAATGCTTCAGATTGTTGACATAGCACACAACAACTTTAGTGGTGAAATACCAGGAACACGCTTAACTACATGGAAAGCAATGATGGACACCCAATCATCGATCAATCATCTGCAATCTCCTGTCTTTCAATTCACTGACGAGCTAAATTATCAGGATGCTATAACAGTTACCACCAAAGGACAAGAGATGGAGTTGGTCAAGATTCTGACTGTCTTCACCTCTATCGACTTCTCATGCAACAATTTTAATGGATCAATACCGGCACAAGTGGGACAATTGAAAGCACTCTATGGCCTCAACTTGTCCAACAATGCTCTCACAGGCCCTATCCCACCATCATTGAGTAACCTGACACAACTCGAGTCCTTGGACCTTTCAAAGAACGGCCTGAGCGGGCCAATTCCACCAAAGCTCACAGCGCTTACTTTCCTTTCATTCTTGAATCTCTCAGATAATCAACTGGTGGGGAGGATACCAAGTGGAACTCAGTTTTCAACATTTGATTCAACTTCCTTCGAAGATAATAAAGGGTTATGTGGGGAACCTTTACATGTAAAATGCAGTAATTCCAGTGACTCACTAGAGTCGGGCATTGGACAACTGATTAACTGGGAACTTATCAGTGTTGAAATTGGATTTACATGTGGGTTTGGAATTGCCATTGCATCACTTTTCTTTTGCAAGAGATGGAGGATATGGTATTACAGAGCTATGCAGAGCATTCTACTGAAGATATTCCCTCAGCTGGAAGAAAGATTTGGGGATCACAGAAGGCATGTTTACATAGATCCAAGGTGGAGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1070

Amino Acids

118.15

Weight (kDa)

6.66

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 83 3.7e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 465 - 524 1.3e-06 Leucine rich repeat
LRR_8 PF13855 705 - 764 7.8e-07 Leucine rich repeat
LRR_8 PF13855 729 - 788 3.7e-07 Leucine rich repeat
LRR_4 PF12799 729 - 767 1.4e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1584
Acc65I GGTACC 2 cut(s) 877, 2396
AccB1I GGYRCC 2 cut(s) 877, 2396
AccBSI CCGCTC 1 cut(s) 2799
AccI GTMKAC 1 cut(s) 776
AciI CCGC 1 cut(s) 2799
AclWI GGATC 6 cut(s) 710, 723, 2026, 2665, 3177, 3188
AcoI YGGCCR 4 cut(s) 112, 1161, 2176, 2402
AcuI CTGAAG 7 cut(s) 176, 1340, 1480, 1847, 2027, 2396, 3155
AcyI GRCGYC 1 cut(s) 2371
AdeI CACNNNGTG 1 cut(s) 89
AfaI GTAC 8 cut(s) 338, 379, 853, 879, 1437, 1505, 2124, 2398
AfeI AGCGCT 1 cut(s) 2826
AfiI CCNNNNNNNGG 6 cut(s) 100, 355, 950, 1723, 1864, 3151
AflIII ACRYGT 3 cut(s) 1116, 2956, 3047
AjnI CCWGG 6 cut(s) 520, 977, 2014, 2173, 2399, 2455
AjuI GAANNNNNNNTTGG 6 cut(s) 1331, 1363, 1433, 1465, 3147, 3179
Alw21I GWGCWC 3 cut(s) 322, 634, 958
Alw26I GTCTC 6 cut(s) 15, 220, 247, 1302, 1763, 1986
AlwI GGATC 6 cut(s) 710, 723, 2026, 2665, 3177, 3188
Ama87I CYCGRG 1 cut(s) 2765
Aor51HI AGCGCT 1 cut(s) 2826
ApeKI GCWGC 2 cut(s) 133, 1056
ArsI GACNNNNNNTTYG 2 cut(s) 25, 57
Asp700I GAANNNNTTC 2 cut(s) 577, 3140
Asp718I GGTACC 2 cut(s) 877, 2396
AspLEI GCGC 1 cut(s) 2827
AspS9I GGNCC 8 cut(s) 707, 963, 1067, 1430, 1805, 2729, 2776, 2801
AsuC2I CCSGG 1 cut(s) 451
AsuHPI GGTGA 6 cut(s) 211, 1757, 1918, 1964, 2459, 2614
AsuII TTCGAA 1 cut(s) 2922
AsuNHI GCTAGC 2 cut(s) 406, 1943
AvaI CYCGRG 1 cut(s) 2765
AvaII GGWCC 4 cut(s) 963, 1067, 1805, 2776
AxyI CCTNAGG 1 cut(s) 823
BalI TGGCCA 4 cut(s) 114, 1163, 2178, 2404
BamHI GGATCC 1 cut(s) 715
BanI GGYRCC 2 cut(s) 877, 2396
BanII GRGCYC 2 cut(s) 634, 958
BbsI GAAGAC 2 cut(s) 1599, 2611
Bbv12I GWGCWC 3 cut(s) 322, 634, 958
BbvCI CCTCAGC 2 cut(s) 671, 3147
BbvI GCAGC 2 cut(s) 145, 1068
BccI CCATC 9 cut(s) 276, 397, 599, 1274, 1300, 2482, 2587, 2749, 3087
BceAI ACGGC 2 cut(s) 1478, 2806
BciT130I CCWGG 6 cut(s) 522, 979, 2016, 2175, 2401, 2457
BciVI GTATCC 1 cut(s) 2871
BcnI CCSGG 1 cut(s) 451
BcoDI GTCTC 6 cut(s) 15, 220, 247, 1302, 1763, 1986
BfmI CTRYAG 2 cut(s) 332, 887
BfoI RGCGCY 1 cut(s) 2828
BfuI GTATCC 1 cut(s) 2871
BglII AGATCT 3 cut(s) 867, 1042, 1702
BisI GCNGC 2 cut(s) 134, 1057
BlsI GCNGC 2 cut(s) 135, 1058
BmcAI AGTACT 1 cut(s) 2124
Bme1390I CCNGG 7 cut(s) 451, 522, 979, 2016, 2175, 2401, 2457
Bme18I GGWCC 4 cut(s) 963, 1067, 1805, 2776
BmeT110I CYCGRG 1 cut(s) 2765
BmgT120I GGNCC 8 cut(s) 707, 963, 1067, 1430, 1805, 2729, 2776, 2801
BmiI GGNNCC 7 cut(s) 717, 879, 965, 1068, 1806, 2398, 2949
BmrFI CCNGG 7 cut(s) 451, 522, 979, 2016, 2175, 2401, 2457
BmrI ACTGGG 3 cut(s) 388, 2083, 3025
BmsI GCATC 5 cut(s) 556, 1386, 2331, 2551, 3080
BmtI GCTAGC 2 cut(s) 410, 1947
BmuI ACTGGG 3 cut(s) 388, 2083, 3025
BpiI GAAGAC 2 cut(s) 1599, 2611
BpmI CTGGAG 1 cut(s) 765
Bpu10I CCTNAGC 3 cut(s) 671, 2795, 3147
Bpu14I TTCGAA 1 cut(s) 2922
BpuEI CTTGAG 5 cut(s) 298, 563, 1007, 1693, 2092
BpuMI CCSGG 1 cut(s) 451
Bsa29I ATCGAT 2 cut(s) 290, 2504
BsaBI GATNNNNATC 1 cut(s) 558
BsaHI GRCGYC 1 cut(s) 2371
BsaI GGTCTC 1 cut(s) 15
BsaJI CCNNGG 4 cut(s) 2275, 2374, 2772, 3197
BsaXI ACNNNNNCTCC 4 cut(s) 246, 276, 1741, 1771
Bsc4I CCNNNNNNNGG 6 cut(s) 100, 355, 950, 1723, 1864, 3151
Bse118I RCCGGY 2 cut(s) 1939, 2665
Bse21I CCTNAGG 1 cut(s) 823
Bse3DI GCAATG 3 cut(s) 2035, 2490, 3066
Bse8I GATNNNNATC 1 cut(s) 558
BseBI CCWGG 6 cut(s) 522, 979, 2016, 2175, 2401, 2457
BseCI ATCGAT 2 cut(s) 290, 2504
BseDI CCNNGG 4 cut(s) 2275, 2374, 2772, 3197
BseGI GGATG 5 cut(s) 389, 547, 1285, 2384, 2566
BseJI GATNNNNATC 1 cut(s) 558
BseLI CCNNNNNNNGG 6 cut(s) 100, 355, 950, 1723, 1864, 3151
BseMI GCAATG 3 cut(s) 2035, 2490, 3066
BseMII CTCAG 9 cut(s) 100, 647, 662, 1631, 1768, 2786, 2868, 2906, 3161
BseXI GCAGC 2 cut(s) 145, 1068
BseYI CCCAGC 2 cut(s) 282, 2150
BsgI GTGCAG 1 cut(s) 516
BshNI GGYRCC 2 cut(s) 877, 2396
BshVI ATCGAT 2 cut(s) 290, 2504
BsiHKAI GWGCWC 3 cut(s) 322, 634, 958
BsiHKCI CYCGRG 1 cut(s) 2765
BsiSI CCGG 4 cut(s) 450, 1004, 1940, 2666
BslFI GGGAC 7 cut(s) 949, 1080, 1859, 1881, 2167, 2367, 2691
BslI CCNNNNNNNGG 6 cut(s) 100, 355, 950, 1723, 1864, 3151
BsmAI GTCTC 6 cut(s) 15, 220, 247, 1302, 1763, 1986
BsmBI CGTCTC 1 cut(s) 1302
BsmFI GGGAC 7 cut(s) 949, 1080, 1859, 1881, 2167, 2367, 2691
BsmI GAATGC 2 cut(s) 2010, 3126
Bso31I GGTCTC 1 cut(s) 15
BsoBI CYCGRG 1 cut(s) 2765
Bsp119I TTCGAA 1 cut(s) 2922
Bsp1286I GDGCHC 3 cut(s) 322, 634, 958
BspACI CCGC 1 cut(s) 2799
BspCNI CTCAG 9 cut(s) 99, 646, 663, 1630, 1767, 2787, 2867, 2905, 3160
BspDI ATCGAT 2 cut(s) 290, 2504
BspHI TCATGA 1 cut(s) 831
BspLI GGNNCC 7 cut(s) 717, 879, 965, 1068, 1806, 2398, 2949
BspMAI CTGCAG 2 cut(s) 336, 891
BspOI GCTAGC 2 cut(s) 410, 1947
BspPI GGATC 6 cut(s) 710, 723, 2026, 2665, 3177, 3188
BspQI GCTCTTC 2 cut(s) 963, 2312
BspT104I TTCGAA 1 cut(s) 2922
BspT107I GGYRCC 2 cut(s) 877, 2396
BspTNI GGTCTC 1 cut(s) 15
BsrBI CCGCTC 1 cut(s) 2799
BsrDI GCAATG 3 cut(s) 2035, 2490, 3066
BsrFI RCCGGY 2 cut(s) 1939, 2665
BssAI RCCGGY 2 cut(s) 1939, 2665
BssECI CCNNGG 4 cut(s) 2275, 2374, 2772, 3197
BssNI GRCGYC 1 cut(s) 2371
BssT1I CCWWGG 4 cut(s) 2275, 2374, 2772, 3197
Bst2UI CCWGG 6 cut(s) 522, 979, 2016, 2175, 2401, 2457
Bst4CI ACNGT 8 cut(s) 744, 1520, 1530, 1837, 1972, 2257, 2572, 2617
Bst6I CTCTTC 4 cut(s) 963, 1387, 2163, 2312
BstACI GRCGYC 1 cut(s) 2371
BstAPI GCANNNNNTGC 1 cut(s) 1330
BstBI TTCGAA 1 cut(s) 2922
BstC8I GCNNGC 5 cut(s) 180, 408, 442, 1945, 2801
BstF5I GGATG 5 cut(s) 389, 547, 1285, 2384, 2566
BstH2I RGCGCY 1 cut(s) 2828
BstHHI GCGC 1 cut(s) 2827
BstMAI GTCTC 6 cut(s) 15, 220, 247, 1302, 1763, 1986
BstMWI GCNNNNNNNGC 6 cut(s) 544, 629, 983, 1198, 1330, 2824
BstNI CCWGG 6 cut(s) 522, 979, 2016, 2175, 2401, 2457
BstNSI RCATGY 4 cut(s) 1120, 2960, 3051, 3185
BstSCI CCNGG 7 cut(s) 449, 520, 977, 2014, 2173, 2399, 2455
BstSFI CTRYAG 2 cut(s) 332, 887
BstV1I GCAGC 2 cut(s) 145, 1068
BstV2I GAAGAC 2 cut(s) 1599, 2611
BstX2I RGATCY 5 cut(s) 715, 867, 1042, 1702, 3193
BstXI CCANNNNNNTGG 3 cut(s) 196, 1903, 2150
BstYI RGATCY 5 cut(s) 715, 867, 1042, 1702, 3193
Bsu15I ATCGAT 2 cut(s) 290, 2504
Bsu36I CCTNAGG 1 cut(s) 823
BsuI GTATCC 1 cut(s) 2871
BsuTUI ATCGAT 2 cut(s) 290, 2504
BtsCI GGATG 5 cut(s) 389, 547, 1285, 2384, 2566
BtsI GCAGTG 3 cut(s) 533, 659, 884
Cac8I GCNNGC 5 cut(s) 180, 408, 442, 1945, 2801
CciI TCATGA 1 cut(s) 831
CfoI GCGC 1 cut(s) 2827
Cfr10I RCCGGY 2 cut(s) 1939, 2665
Cfr13I GGNCC 8 cut(s) 707, 963, 1067, 1430, 1805, 2729, 2776, 2801
ClaI ATCGAT 2 cut(s) 290, 2504
CseI GACGC 2 cut(s) 2022, 2379
Csp6I GTAC 8 cut(s) 337, 378, 852, 878, 1436, 1504, 2123, 2397
CspCI CAANNNNNGTGG 6 cut(s) 1480, 1515, 2425, 2460, 2727, 2762
CviQI GTAC 8 cut(s) 337, 378, 852, 878, 1436, 1504, 2123, 2397
DraIII CACNNNGTG 1 cut(s) 89
EaeI YGGCCR 4 cut(s) 112, 1161, 2176, 2402
Eam1104I CTCTTC 4 cut(s) 963, 1387, 2163, 2312
EarI CTCTTC 4 cut(s) 963, 1387, 2163, 2312
Ecl136II GAGCTC 2 cut(s) 632, 956
Eco130I CCWWGG 4 cut(s) 2275, 2374, 2772, 3197
Eco147I AGGCCT 1 cut(s) 828
Eco24I GRGCYC 2 cut(s) 634, 958
Eco31I GGTCTC 1 cut(s) 15
Eco47I GGWCC 4 cut(s) 963, 1067, 1805, 2776
Eco47III AGCGCT 1 cut(s) 2826
Eco53kI GAGCTC 2 cut(s) 632, 956
Eco57I CTGAAG 7 cut(s) 176, 1340, 1480, 1847, 2027, 2396, 3155
Eco81I CCTNAGG 1 cut(s) 823
Eco88I CYCGRG 1 cut(s) 2765
EcoICRI GAGCTC 2 cut(s) 632, 956
EcoO109I RGGNCCY 3 cut(s) 707, 1805, 2729
EcoRI GAATTC 2 cut(s) 835, 1783
EcoRII CCWGG 6 cut(s) 520, 977, 2014, 2173, 2399, 2455
EcoT14I CCWWGG 4 cut(s) 2275, 2374, 2772, 3197
EcoT38I GRGCYC 2 cut(s) 634, 958
ErhI CCWWGG 4 cut(s) 2275, 2374, 2772, 3197
Esp3I CGTCTC 1 cut(s) 1302
FalI AAGNNNNNCTT 4 cut(s) 1029, 1061, 1433, 1465
FaqI GGGAC 7 cut(s) 949, 1080, 1859, 1881, 2167, 2367, 2691
FauI CCCGC 1 cut(s) 2792
FblI GTMKAC 1 cut(s) 776
Fnu4HI GCNGC 2 cut(s) 134, 1057
FokI GGATG 5 cut(s) 376, 534, 1292, 2391, 2573
FriOI GRGCYC 2 cut(s) 634, 958
Fsp4HI GCNGC 2 cut(s) 134, 1057
GlaI GCGC 1 cut(s) 2826
GluI GCNGC 2 cut(s) 134, 1057
GsaI CCCAGC 2 cut(s) 286, 2154
GsuI CTGGAG 1 cut(s) 765
HaeII RGCGCY 1 cut(s) 2828
HapII CCGG 4 cut(s) 450, 1004, 1940, 2666
HgaI GACGC 2 cut(s) 2022, 2379
HhaI GCGC 1 cut(s) 2827
Hin1I GRCGYC 1 cut(s) 2371
Hin6I GCGC 1 cut(s) 2825
HinP1I GCGC 1 cut(s) 2825
HincII GTYRAC 3 cut(s) 480, 1833, 2422
HindII GTYRAC 3 cut(s) 480, 1833, 2422
HindIII AAGCTT 1 cut(s) 1130
HpaII CCGG 4 cut(s) 450, 1004, 1940, 2666
HphI GGTGA 6 cut(s) 211, 1757, 1918, 1964, 2459, 2614
Hpy166II GTNNAC 8 cut(s) 302, 480, 613, 777, 1114, 1833, 2422, 3187
Hpy8I GTNNAC 8 cut(s) 302, 480, 613, 777, 1114, 1833, 2422, 3187
HpyAV CCTTC 8 cut(s) 230, 520, 729, 1199, 1856, 2216, 2929, 3171
HpyCH4III ACNGT 8 cut(s) 744, 1520, 1530, 1837, 1972, 2257, 2572, 2617
HpyF10VI GCNNNNNNNGC 6 cut(s) 544, 629, 983, 1198, 1330, 2824
Hsp92I GRCGYC 1 cut(s) 2371
HspAI GCGC 1 cut(s) 2825
KpnI GGTACC 2 cut(s) 881, 2400
LguI GCTCTTC 2 cut(s) 963, 2312
LmnI GCTCC 4 cut(s) 153, 629, 953, 2007
Lsp1109I GCAGC 2 cut(s) 145, 1068
LweI GCATC 5 cut(s) 556, 1386, 2331, 2551, 3080
MaeIII GTNAC 6 cut(s) 262, 843, 1792, 2572, 2750, 2978
MbiI CCGCTC 1 cut(s) 2799
MfeI CAATTG 3 cut(s) 373, 2248, 2681
MflI RGATCY 5 cut(s) 715, 867, 1042, 1702, 3193
MhlI GDGCHC 3 cut(s) 322, 634, 958
MlsI TGGCCA 4 cut(s) 114, 1163, 2178, 2404
MluNI TGGCCA 4 cut(s) 114, 1163, 2178, 2404
MlyI GAGTC 5 cut(s) 1555, 2149, 2777, 2975, 2999
MmeI TCCRAC 4 cut(s) 175, 1362, 1483, 2736
Mox20I TGGCCA 4 cut(s) 114, 1163, 2178, 2404
MroXI GAANNNNTTC 2 cut(s) 577, 3140
MscI TGGCCA 4 cut(s) 114, 1163, 2178, 2404
MslI CAYNNNNRTG 2 cut(s) 603, 2305
Msp20I TGGCCA 4 cut(s) 114, 1163, 2178, 2404
MspA1I CMGCKG 1 cut(s) 3151
MspI CCGG 4 cut(s) 450, 1004, 1940, 2666
MspR9I CCNGG 7 cut(s) 451, 522, 979, 2016, 2175, 2401, 2457
MunI CAATTG 3 cut(s) 373, 2248, 2681
Mva1269I GAATGC 2 cut(s) 2010, 3126
MvaI CCWGG 6 cut(s) 522, 979, 2016, 2175, 2401, 2457
MwoI GCNNNNNNNGC 6 cut(s) 544, 629, 983, 1198, 1330, 2824
NciI CCSGG 1 cut(s) 451
NheI GCTAGC 2 cut(s) 406, 1943
NlaIV GGNNCC 7 cut(s) 717, 879, 965, 1068, 1806, 2398, 2949
NmuCI GTSAC 1 cut(s) 2978
NspI RCATGY 4 cut(s) 1120, 2960, 3051, 3185
NspV TTCGAA 1 cut(s) 2922
PaeR7I CTCGAG 1 cut(s) 2765
PagI TCATGA 1 cut(s) 831
PceI AGGCCT 1 cut(s) 828
PciI ACATGT 3 cut(s) 1116, 2956, 3047
PciSI GCTCTTC 2 cut(s) 963, 2312
PctI GAATGC 2 cut(s) 2010, 3126
PdmI GAANNNNTTC 2 cut(s) 577, 3140
PfoI TCCNGGA 2 cut(s) 520, 2014
PkrI GCNGC 2 cut(s) 135, 1058
PleI GAGTC 5 cut(s) 1554, 2149, 2776, 2975, 2998
PpsI GAGTC 5 cut(s) 1554, 2149, 2776, 2975, 2998
PpuMI RGGWCCY 1 cut(s) 1805
PscI ACATGT 3 cut(s) 1116, 2956, 3047
PsiI TTATAA 1 cut(s) 1584
Psp124BI GAGCTC 2 cut(s) 634, 958
Psp5II RGGWCCY 1 cut(s) 1805
Psp6I CCWGG 6 cut(s) 520, 977, 2014, 2173, 2399, 2455
PspFI CCCAGC 2 cut(s) 282, 2150
PspGI CCWGG 6 cut(s) 520, 977, 2014, 2173, 2399, 2455
PspN4I GGNNCC 7 cut(s) 717, 879, 965, 1068, 1806, 2398, 2949
PspPI GGNCC 8 cut(s) 707, 963, 1067, 1430, 1805, 2729, 2776, 2801
PspPPI RGGWCCY 1 cut(s) 1805
PspXI VCTCGAGB 1 cut(s) 2765
PstI CTGCAG 2 cut(s) 336, 891
PsuI RGATCY 5 cut(s) 715, 867, 1042, 1702, 3193
PvuII CAGCTG 1 cut(s) 3151
RsaI GTAC 8 cut(s) 338, 379, 853, 879, 1437, 1505, 2124, 2398
RsaNI GTAC 8 cut(s) 337, 378, 852, 878, 1436, 1504, 2123, 2397
RseI CAYNNNNRTG 2 cut(s) 603, 2305
SacI GAGCTC 2 cut(s) 634, 958
SapI GCTCTTC 2 cut(s) 963, 2312
SatI GCNGC 2 cut(s) 134, 1057
Sau96I GGNCC 8 cut(s) 707, 963, 1067, 1430, 1805, 2729, 2776, 2801
ScaI AGTACT 1 cut(s) 2124
SchI GAGTC 5 cut(s) 1555, 2149, 2777, 2975, 2999
ScrFI CCNGG 7 cut(s) 451, 522, 979, 2016, 2175, 2401, 2457
SduI GDGCHC 3 cut(s) 322, 634, 958
SfaNI GCATC 5 cut(s) 556, 1386, 2331, 2551, 3080
SfcI CTRYAG 2 cut(s) 332, 887
Sfr274I CTCGAG 1 cut(s) 2765
SfuI TTCGAA 1 cut(s) 2922
SinI GGWCC 4 cut(s) 963, 1067, 1805, 2776
SlaI CTCGAG 1 cut(s) 2765
SmiMI CAYNNNNRTG 2 cut(s) 603, 2305
SmlI CTYRAG 6 cut(s) 277, 542, 1022, 1672, 2071, 2765
SmoI CTYRAG 6 cut(s) 277, 542, 1022, 1672, 2071, 2765
SseBI AGGCCT 1 cut(s) 828
SsiI CCGC 1 cut(s) 2799
SspI AATATT 1 cut(s) 2083
SstI GAGCTC 2 cut(s) 634, 958
StuI AGGCCT 1 cut(s) 828
StyD4I CCNGG 7 cut(s) 449, 520, 977, 2014, 2173, 2399, 2455
StyI CCWWGG 4 cut(s) 2275, 2374, 2772, 3197
TaaI ACNGT 8 cut(s) 744, 1520, 1530, 1837, 1972, 2257, 2572, 2617
TaqII GACCGA 1 cut(s) 951
TatI WGTACW 3 cut(s) 336, 377, 2122
TseFI GTSAC 1 cut(s) 2978
TseI GCWGC 2 cut(s) 133, 1056
Tsp45I GTSAC 1 cut(s) 2978
TspDTI ATGAA 5 cut(s) 587, 848, 1548, 1838, 2829
TspGWI ACGGA 3 cut(s) 1112, 1137, 1190
VpaK11BI GGWCC 4 cut(s) 963, 1067, 1805, 2776
XbaI TCTAGA 3 cut(s) 1798, 2197, 2218
XceI RCATGY 4 cut(s) 1120, 2960, 3051, 3185
XcmI CCANNNNNNNNNTGG 1 cut(s) 1633
XhoI CTCGAG 1 cut(s) 2765
XmiI GTMKAC 1 cut(s) 776
XmnI GAANNNNTTC 2 cut(s) 577, 3140
ZrmI AGTACT 1 cut(s) 2124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.