MD04G1160800.v1.1

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000047
Physical Location & Seq
Forward (+)
25144689 .. 25147714
3026 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1160800.v1.1.491

Sequence Viewer

Length: 2979 bp
ATGATTCATACCGACTGTTGTTCTTGGGTCGGTGTTTCTTGCGGTACCAACGGGCGTGTTGTCGGTCTTGACATTAGCAGCCAATACATCTCGGGTGGCATTGACAGCTCCAGCAGTCTCTTCGATCTTCAGCATCTTCAAAGCCTCAACTTGGCCGATAACCATTTTGTTGACGGCTCTCTCATTCCATCTGCAATCGGAAAGCTGACAAACTTGAGGTATCTAAATTTATCAAATAACGTTTATTTCGGGAAAAATCCCATTGAGATTTCACGCTTGACAAGGTTGGAGGTTCTTGATATTTCTCAACGTTACAATAACGGGCGCCGCAAACCACTTGAAAGCCCGAAGTTCAGCATGCTCTTTCAGAACCTCACAGAGCTTATAGAGCTTTATCTTGACGGTGTAGATATATCAGTAGAGAAGACTCACTGGTGCCAAGCGATATCATCTTCACTGCCAAACCTAAGGGTGTTGAGCTTATCTCGAACTAATCTTTCGGGTCCTATCGATCAATCCCTCGCTAAGCTTCAGTCTCTATCAGTGATTCAATTGGGTGGTTTTGGCAACAACATCTCCGGTCCAATTCCAGGATTCTTTTCCAACTTTTCAAACCTAACGGTGTTGAACTTGGACGGAAACAATATCTCTGCTCCGGTTCCAAGATTCTTTGCCAATTTTTCAAAGTTGACTACCTTGAGTTTATGTAATTGTGGTTTACGTGGAGCAGTTCCAAAGCAGATTTTTCAGGTACCTACTCTACAAACTCTTGACCTCTCCTTTAATCCGGAACTTCATGGTTCTTTGCCAGAATTTCCCAAGAATGGATCTCTTCAATCCTTGATTTTAAGCGAGACAAGCTTTTCAGGGTTATTGCATGACTCTATTGGCAACCTCAACATGTTGTCCACACTAGACCTTTCCAAATGCAATTTCACTGGATCAATCCCAAAGTCAATCGGGAACCTATCTAAATTGGTTGATTTGGACGCGTCATCAAACCTGTTTAATGGTCCAATTAGTTCTATTCATTGGGAAAACCTTATTAATCTGGTACATCTCCATTTGGACAACAATCAACTGGTGGGGAGTATTCCGTCATCTCTGTTTTCTCTTCCCTTGTTGCCAGACTTGGTACTTTCCTATAATAATTTCTCTGGGCAACTCCCTGAAAATTTTAACGTCTCTTCTAGTTTAGTTACTTTCATTGATTTGAGTTTCAACAATTTAGAAGGACCAGTACCCGTGTCTATCTTTAATTTTCAAGGGCTTGAAACCCTCACTCTTTCTTCAAATAATTTCAGTGCCTTTCCTTTTAATGGTCCTCATCAGCTGCCAAAACTTACGAGCATTGATCTTTCACACAATAGCTTGCTGGTTTTATACAAGGGCAGCAATTCCTCATACTCTTCATTTCCTCAAATTATTGATTTCAGTTTGGCTTCTAACAAGTTGAGAACATTCCCAGTTTTCTTGAGAAATCAAACTAGTTTACGAAGTTTGGACCTTTCGGATAACCAAGTTCAAGGCCAACTACCCAATTGGATTTGGAAGTTTGATTCTCTCGAATACCTAAATGTTTCATGTAACTCTTTAGAAACTCTAGAAACTCCTTTCCTCAACTCCACATCTCATGTATCTGTGCTTGACCTTCATTTGAACCAGCTTAAGGGGCCAATTTCAATTGTTCCACCATATGCCCATTATCTGGATTACTCAAACAATCATTTCAGTTCTAGTATTCCAATCTCAATATGCAATGCAAGTGATCTTCTCACTCTTGATTTGTCCAATAATACTCTGAGTGGCGAGATTCCCCAATGCTTGGCTGCAATGAGTACACTCAGGATACTTAATGTGAGGAAAAACAACATTGCTGGAACTATTACTATTCCTGAAAAATGTGACTCATTAGAAACTCTAGACCTCAGCCAAAATCAGATCAGAGGTCAGTTACCAAAGTCTCTAGCCATGTGCAGAAGGTTAAGATTTTTAAACCTTGAAGAGAATCAGATAACAGACACCTTCCCATGCTTGTTGAAGAACGTCTCCACCTTGAGCGTTCTTGCTTTGCGGTCCAACAATTTCTATGGAGGCATTGGATGTCCAGTAGTGAAGACCAATGGCACCTGGCCCGTTCTTCAAATCATAGACTTAGCATACAACAATTTCAATGGTGAAGTACCGGGATTCTCTCTGACATCATGGCAAGCAATGAAAGATAACAAAGATATTGGTTTCCCGTCGACAGTCAGTGTTTTTCAAGGTGAAAACCTTCATGGAGGAGGGGGTGAATTTTTTTATGAGCATGCTATAACGATTACAAGCAAAGGTTTAAAGAGTGATCTGGCAAAGATTCTTACTATCTTGACCTTGATTGACTTCTCATGCAACAATTTCAGTGGGCCAATACCCAAGGAAATGGGAGATTTGAAATCACTATATTTGCTCAACTTGTCGAGTAACGCTTTCACAGGTGAAATCCCATCATCATTTGGTAACATGCGACAACTCGAGTCTTTGGACCTGTCACAAAACAAGCTGAGCGGGCAAATCCCACAACAACTGGCAAAGCTTAATTTCCTTGCATTCTTGAATCTTTCAAATAATCAACTTGCCGGCAAGATCCCAGCTGGTACTCAAATTTCAACATTTCCAAGAGACTCATTTACAGGGAACAAAGAGTTATGGGGGCCTCCATTGACGGTAGATAACAAGGCAGGACTGTCACCACCACCAACATTTAACGGAAGCCATCCAAATTCTACAAATGAGATTGATTGGGATCTTATTAGTATCGAAATTGGATTTGCATTTGGCTTTGCAGTTGCTGTTGGGTCACTTGTGTTCTTCAAAAGATGGAGTAAATGGTATTACAGGACTATGTATAAAATCCTTGTGAAGATATTCCCTCAACTTGAAGAAAGAATTGGTCCTCATCGAAGACATGTTCACATAAATCAGAGGTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

993

Amino Acids

109.5

Weight (kDa)

6.41

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 39 - 159 5.1e-07 Leucine-rich repeat region
LRR_8 PF13855 403 - 458 1.9e-06 Leucine rich repeat
LRR_8 PF13855 817 - 872 5.5e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 44, 751
AccB1I GGYRCC 5 cut(s) 44, 324, 435, 751, 2126
AccB7I CCANNNNNTGG 2 cut(s) 1708, 1825
AccBSI CCGCTC 1 cut(s) 2547
AccI GTMKAC 1 cut(s) 2246
AccII CGCG 1 cut(s) 992
AccIII TCCGGA 1 cut(s) 787
AciI CCGC 4 cut(s) 42, 328, 2074, 2547
AclI AACGTT 2 cut(s) 240, 310
AclWI GGATC 4 cut(s) 835, 949, 2620, 2793
AcoI YGGCCR 1 cut(s) 153
AcsI RAATTY 6 cut(s) 226, 812, 1174, 2294, 2643, 2761
AcuI CTGAAG 2 cut(s) 113, 515
AcyI GRCGYC 1 cut(s) 325
AfaI GTAC 8 cut(s) 46, 753, 1056, 1137, 1242, 1840, 2184, 2638
AfiI CCNNNNNNNGG 7 cut(s) 151, 590, 824, 1319, 1669, 1708, 1825
AflII CTTAAG 1 cut(s) 1667
AflIII ACRYGT 3 cut(s) 900, 990, 2947
AhlI ACTAGT 1 cut(s) 1487
AjnI CCWGG 2 cut(s) 589, 2129
AjuI GAANNNNNNNTTGG 4 cut(s) 917, 949, 2913, 2945
Alw26I GTCTC 8 cut(s) 122, 540, 848, 1189, 1968, 2053, 2655, 2965
AlwI GGATC 4 cut(s) 835, 949, 2620, 2793
AlwNI CAGNNNCTG 1 cut(s) 2831
Ama87I CYCGRG 2 cut(s) 91, 2513
Aor13HI TCCGGA 1 cut(s) 787
AoxI GGCC 6 cut(s) 153, 1528, 1673, 2132, 2405, 2693
ApeKI GCWGC 4 cut(s) 78, 1333, 1392, 1829
ApoI RAATTY 6 cut(s) 226, 812, 1174, 2294, 2643, 2761
AseI ATTAAT 1 cut(s) 1047
Asp700I GAANNNNTTC 2 cut(s) 2274, 2906
Asp718I GGTACC 2 cut(s) 44, 751
AspLEI GCGC 1 cut(s) 327
AsuC2I CCSGG 1 cut(s) 2187
AsuHPI GGTGA 5 cut(s) 2189, 2279, 2303, 2489, 2721
AvaI CYCGRG 2 cut(s) 91, 2513
AvaII GGWCC 9 cut(s) 503, 581, 1013, 1235, 1322, 1504, 2076, 2524, 2933
AxyI CCTNAGG 1 cut(s) 467
BanI GGYRCC 5 cut(s) 44, 324, 435, 751, 2126
BarI GAAGNNNNNNTAC 2 cut(s) 1224, 1256
BbsI GAAGAC 3 cut(s) 431, 2123, 2950
BbvCI CCTCAGC 1 cut(s) 1928
BbvI GCAGC 4 cut(s) 90, 1320, 1404, 1816
BccI CCATC 4 cut(s) 196, 2494, 2763, 2853
BceAI ACGGC 1 cut(s) 190
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 2 cut(s) 591, 2131
BciVI GTATCC 1 cut(s) 1842
BcnI CCSGG 1 cut(s) 2187
BcoDI GTCTC 8 cut(s) 122, 540, 848, 1189, 1968, 2053, 2655, 2965
BcuI ACTAGT 1 cut(s) 1487
BfaI CTAG 7 cut(s) 914, 1191, 1488, 1604, 1737, 1922, 1967
BfoI RGCGCY 1 cut(s) 328
BfrI CTTAAG 1 cut(s) 1667
BfuI GTATCC 1 cut(s) 1842
BisI GCNGC 5 cut(s) 79, 328, 1334, 1393, 1830
BlpI GCTNAGC 2 cut(s) 525, 2543
BlsI GCNGC 5 cut(s) 80, 329, 1335, 1394, 1831
Bme1390I CCNGG 3 cut(s) 591, 2131, 2187
Bme18I GGWCC 9 cut(s) 503, 581, 1013, 1235, 1322, 1504, 2076, 2524, 2933
BmeT110I CYCGRG 2 cut(s) 91, 2513
BmrFI CCNGG 3 cut(s) 591, 2131, 2187
BmrI ACTGGG 1 cut(s) 1460
BmsI GCATC 1 cut(s) 142
BmuI ACTGGG 1 cut(s) 1460
BpiI GAAGAC 3 cut(s) 431, 2123, 2950
BplI GAGNNNNNCTC 2 cut(s) 469, 501
BpmI CTGGAG 1 cut(s) 94
Bpu10I CCTNAGC 1 cut(s) 1928
Bpu1102I GCTNAGC 2 cut(s) 525, 2543
BpuEI CTTGAG 4 cut(s) 235, 718, 1495, 2077
BpuMI CCSGG 1 cut(s) 2187
Bsa29I ATCGAT 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 722
BsaBI GATNNNNATC 1 cut(s) 2784
BsaHI GRCGYC 1 cut(s) 325
BsaJI CCNNGG 1 cut(s) 2415
BsaWI WCCGGW 3 cut(s) 578, 655, 787
BsaXI ACNNNNNCTCC 2 cut(s) 560, 590
Bsc4I CCNNNNNNNGG 7 cut(s) 151, 590, 824, 1319, 1669, 1708, 1825
Bse118I RCCGGY 1 cut(s) 2618
Bse1I ACTGG 7 cut(s) 437, 943, 1086, 1238, 1466, 2108, 2571
Bse21I CCTNAGG 1 cut(s) 467
Bse3DI GCAATG 4 cut(s) 1765, 1839, 1872, 2220
Bse8I GATNNNNATC 1 cut(s) 2784
BseAI TCCGGA 1 cut(s) 787
BseBI CCWGG 2 cut(s) 591, 2131
BseCI ATCGAT 1 cut(s) 510
BseDI CCNNGG 1 cut(s) 2415
BseGI GGATG 2 cut(s) 2108, 2755
BseJI GATNNNNATC 1 cut(s) 2784
BseLI CCNNNNNNNGG 7 cut(s) 151, 590, 824, 1319, 1669, 1708, 1825
BseMI GCAATG 4 cut(s) 1765, 1839, 1872, 2220
BseMII CTCAG 4 cut(s) 1793, 1858, 1942, 2534
BseNI ACTGG 7 cut(s) 437, 943, 1086, 1238, 1466, 2108, 2571
BseRI GAGGAG 1 cut(s) 2298
BseXI GCAGC 4 cut(s) 90, 1320, 1404, 1816
BseYI CCCAGC 1 cut(s) 2629
BsgI GTGCAG 1 cut(s) 1996
Bsh1236I CGCG 1 cut(s) 992
BshFI GGCC 6 cut(s) 155, 1530, 1675, 2134, 2407, 2695
BshNI GGYRCC 5 cut(s) 44, 324, 435, 751, 2126
BshVI ATCGAT 1 cut(s) 510
BsiHKCI CYCGRG 2 cut(s) 91, 2513
BsiSI CCGG 5 cut(s) 579, 656, 788, 2186, 2619
BslI CCNNNNNNNGG 7 cut(s) 151, 590, 824, 1319, 1669, 1708, 1825
BsmAI GTCTC 8 cut(s) 122, 540, 848, 1189, 1968, 2053, 2655, 2965
BsmBI CGTCTC 3 cut(s) 1189, 2053, 2965
BsmI GAATGC 1 cut(s) 2588
BsnI GGCC 6 cut(s) 155, 1530, 1675, 2134, 2407, 2695
BsoBI CYCGRG 2 cut(s) 91, 2513
Bsp13I TCCGGA 1 cut(s) 787
Bsp1720I GCTNAGC 2 cut(s) 525, 2543
BspACI CCGC 4 cut(s) 42, 328, 2074, 2547
BspANI GGCC 6 cut(s) 155, 1530, 1675, 2134, 2407, 2695
BspCNI CTCAG 4 cut(s) 1794, 1857, 1941, 2535
BspDI ATCGAT 1 cut(s) 510
BspEI TCCGGA 1 cut(s) 787
BspFNI CGCG 1 cut(s) 992
BspPI GGATC 4 cut(s) 835, 949, 2620, 2793
BspT107I GGYRCC 5 cut(s) 44, 324, 435, 751, 2126
BspTI CTTAAG 1 cut(s) 1667
BsrBI CCGCTC 1 cut(s) 2547
BsrDI GCAATG 4 cut(s) 1765, 1839, 1872, 2220
BsrFI RCCGGY 1 cut(s) 2618
BsrI ACTGG 7 cut(s) 437, 943, 1086, 1238, 1466, 2108, 2571
BssAI RCCGGY 1 cut(s) 2618
BssECI CCNNGG 1 cut(s) 2415
BssNI GRCGYC 1 cut(s) 325
BssT1I CCWWGG 1 cut(s) 2415
Bst2UI CCWGG 2 cut(s) 591, 2131
Bst4CI ACNGT 6 cut(s) 17, 404, 622, 2251, 2707, 2727
Bst6I CTCTTC 6 cut(s) 125, 837, 1119, 1192, 1414, 1998
BstACI GRCGYC 1 cut(s) 325
BstAFI CTTAAG 1 cut(s) 1667
BstBAI YACGTR 1 cut(s) 722
BstC8I GCNNGC 6 cut(s) 359, 1373, 2211, 2310, 2549, 2620
BstDEI CTNAG 7 cut(s) 467, 525, 1802, 1844, 1928, 2155, 2543
BstF5I GGATG 2 cut(s) 2108, 2755
BstFNI CGCG 1 cut(s) 992
BstH2I RGCGCY 1 cut(s) 328
BstHHI GCGC 1 cut(s) 327
BstMAI GTCTC 8 cut(s) 122, 540, 848, 1189, 1968, 2053, 2655, 2965
BstMWI GCNNNNNNNGC 5 cut(s) 105, 388, 858, 1672, 2548
BstNI CCWGG 2 cut(s) 591, 2131
BstNSI RCATGY 5 cut(s) 361, 904, 2312, 2506, 2951
BstSCI CCNGG 3 cut(s) 589, 2129, 2185
BstUI CGCG 1 cut(s) 992
BstV1I GCAGC 4 cut(s) 90, 1320, 1404, 1816
BstV2I GAAGAC 3 cut(s) 431, 2123, 2950
BstX2I RGATCY 3 cut(s) 827, 2625, 2785
BstXI CCANNNNNNTGG 1 cut(s) 2422
BstYI RGATCY 3 cut(s) 827, 2625, 2785
Bsu15I ATCGAT 1 cut(s) 510
Bsu36I CCTNAGG 1 cut(s) 467
BsuI GTATCC 1 cut(s) 1842
BsuRI GGCC 6 cut(s) 155, 1530, 1675, 2134, 2407, 2695
BsuTUI ATCGAT 1 cut(s) 510
BtsCI GGATG 2 cut(s) 2108, 2755
BtsI GCAGTG 1 cut(s) 455
BtsIMutI CAGTG 7 cut(s) 430, 455, 549, 936, 1309, 2260, 2407
Cac8I GCNNGC 6 cut(s) 359, 1373, 2211, 2310, 2549, 2620
CaiI CAGNNNCTG 1 cut(s) 2831
CfoI GCGC 1 cut(s) 327
Cfr10I RCCGGY 1 cut(s) 2618
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 2 cut(s) 981, 998
Csp6I GTAC 8 cut(s) 45, 752, 1055, 1136, 1241, 1839, 2183, 2637
CspCI CAANNNNNGTGG 2 cut(s) 2383, 2418
CviQI GTAC 8 cut(s) 45, 752, 1055, 1136, 1241, 1839, 2183, 2637
DdeI CTNAG 7 cut(s) 467, 525, 1802, 1844, 1928, 2155, 2543
DinI GGCGCC 1 cut(s) 326
DraI TTTAAA 2 cut(s) 1995, 2337
EaeI YGGCCR 1 cut(s) 153
Eam1104I CTCTTC 6 cut(s) 125, 837, 1119, 1192, 1414, 1998
EarI CTCTTC 6 cut(s) 125, 837, 1119, 1192, 1414, 1998
Eco130I CCWWGG 1 cut(s) 2415
Eco32I GATATC 1 cut(s) 447
Eco47I GGWCC 9 cut(s) 503, 581, 1013, 1235, 1322, 1504, 2076, 2524, 2933
Eco57I CTGAAG 2 cut(s) 113, 515
Eco81I CCTNAGG 1 cut(s) 467
Eco88I CYCGRG 2 cut(s) 91, 2513
EcoO109I RGGNCCY 2 cut(s) 503, 2693
EcoRII CCWGG 2 cut(s) 589, 2129
EcoRV GATATC 1 cut(s) 447
EcoT14I CCWWGG 1 cut(s) 2415
EgeI GGCGCC 1 cut(s) 326
EheI GGCGCC 1 cut(s) 326
ErhI CCWWGG 1 cut(s) 2415
Esp3I CGTCTC 3 cut(s) 1189, 2053, 2965
FauI CCCGC 1 cut(s) 2540
FauNDI CATATG 1 cut(s) 1696
FblI GTMKAC 1 cut(s) 2246
Fnu4HI GCNGC 5 cut(s) 79, 328, 1334, 1393, 1830
FokI GGATG 2 cut(s) 2115, 2742
Fsp4HI GCNGC 5 cut(s) 79, 328, 1334, 1393, 1830
FspBI CTAG 7 cut(s) 914, 1191, 1488, 1604, 1737, 1922, 1967
GlaI GCGC 1 cut(s) 326
GluI GCNGC 5 cut(s) 79, 328, 1334, 1393, 1830
GsaI CCCAGC 1 cut(s) 2633
GsuI CTGGAG 1 cut(s) 94
HaeII RGCGCY 1 cut(s) 328
HaeIII GGCC 6 cut(s) 155, 1530, 1675, 2134, 2407, 2695
HapII CCGG 5 cut(s) 579, 656, 788, 2186, 2619
HgaI GACGC 2 cut(s) 981, 998
HhaI GCGC 1 cut(s) 327
Hin1I GRCGYC 1 cut(s) 325
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HincII GTYRAC 3 cut(s) 172, 690, 2247
HindII GTYRAC 3 cut(s) 172, 690, 2247
HindIII AAGCTT 3 cut(s) 527, 859, 2573
HpaII CCGG 5 cut(s) 579, 656, 788, 2186, 2619
HphI GGTGA 5 cut(s) 2189, 2279, 2303, 2489, 2721
Hpy166II GTNNAC 8 cut(s) 172, 690, 719, 909, 1493, 1841, 2247, 2953
Hpy188I TCNGA 9 cut(s) 200, 369, 1513, 1803, 1941, 1946, 2013, 2199, 2964
Hpy8I GTNNAC 8 cut(s) 172, 690, 719, 909, 1493, 1841, 2247, 2953
Hpy99I CGWCG 1 cut(s) 2248
HpyAV CCTTC 5 cut(s) 1226, 1661, 1974, 2035, 2285
HpyCH4III ACNGT 6 cut(s) 17, 404, 622, 2251, 2707, 2727
HpyCH4IV ACGT 6 cut(s) 240, 310, 721, 1182, 2046, 2974
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 388, 858, 1672, 2548
HpyF3I CTNAG 7 cut(s) 467, 525, 1802, 1844, 1928, 2155, 2543
HpySE526I ACGT 6 cut(s) 240, 310, 721, 1182, 2046, 2974
Hsp92I GRCGYC 1 cut(s) 325
HspAI GCGC 1 cut(s) 325
KasI GGCGCC 1 cut(s) 324
Kpn2I TCCGGA 1 cut(s) 787
KpnI GGTACC 2 cut(s) 48, 755
KroI GCCGGC 1 cut(s) 2618
KroNI GCCGGC 1 cut(s) 2620
LmnI GCTCC 3 cut(s) 113, 658, 725
Lsp1109I GCAGC 4 cut(s) 90, 1320, 1404, 1816
LweI GCATC 1 cut(s) 142
MaeI CTAG 7 cut(s) 914, 1191, 1488, 1604, 1737, 1922, 1967
MaeII ACGT 6 cut(s) 240, 310, 721, 1182, 2046, 2974
MbiI CCGCTC 1 cut(s) 2547
MfeI CAATTG 3 cut(s) 551, 1540, 1683
MflI RGATCY 3 cut(s) 827, 2625, 2785
MluI ACGCGT 1 cut(s) 990
Mly113I GGCGCC 1 cut(s) 325
MlyI GAGTC 5 cut(s) 421, 875, 1901, 2525, 2657
MmeI TCCRAC 3 cut(s) 267, 627, 2103
MroI TCCGGA 1 cut(s) 787
MroNI GCCGGC 1 cut(s) 2618
MroXI GAANNNNTTC 2 cut(s) 2274, 2906
MspA1I CMGCKG 2 cut(s) 1333, 2633
MspCI CTTAAG 1 cut(s) 1667
MspI CCGG 5 cut(s) 579, 656, 788, 2186, 2619
MspR9I CCNGG 3 cut(s) 591, 2131, 2187
MunI CAATTG 3 cut(s) 551, 1540, 1683
Mva1269I GAATGC 1 cut(s) 2588
MvaI CCWGG 2 cut(s) 591, 2131
MvnI CGCG 1 cut(s) 992
MwoI GCNNNNNNNGC 5 cut(s) 105, 388, 858, 1672, 2548
NaeI GCCGGC 1 cut(s) 2620
NarI GGCGCC 1 cut(s) 325
NciI CCSGG 1 cut(s) 2187
NdeI CATATG 1 cut(s) 1696
NgoMIV GCCGGC 1 cut(s) 2618
NmuCI GTSAC 4 cut(s) 1904, 2529, 2727, 2838
NspI RCATGY 5 cut(s) 361, 904, 2312, 2506, 2951
PaeI GCATGC 2 cut(s) 361, 2312
PaeR7I CTCGAG 1 cut(s) 2513
PciI ACATGT 2 cut(s) 900, 2947
PctI GAATGC 1 cut(s) 2588
PdiI GCCGGC 1 cut(s) 2620
PdmI GAANNNNTTC 2 cut(s) 2274, 2906
PflMI CCANNNNNTGG 2 cut(s) 1708, 1825
PfoI TCCNGGA 1 cut(s) 589
PkrI GCNGC 5 cut(s) 80, 329, 1335, 1394, 1831
PleI GAGTC 5 cut(s) 421, 875, 1901, 2524, 2657
PluTI GGCGCC 1 cut(s) 328
PpsI GAGTC 5 cut(s) 421, 875, 1901, 2524, 2657
Ppu21I YACGTR 1 cut(s) 722
PpuMI RGGWCCY 1 cut(s) 503
PscI ACATGT 2 cut(s) 900, 2947
PshBI ATTAAT 1 cut(s) 1047
Psp1406I AACGTT 2 cut(s) 240, 310
Psp5II RGGWCCY 1 cut(s) 503
Psp6I CCWGG 2 cut(s) 589, 2129
PspFI CCCAGC 1 cut(s) 2629
PspGI CCWGG 2 cut(s) 589, 2129
PspPPI RGGWCCY 1 cut(s) 503
PspXI VCTCGAGB 1 cut(s) 2513
PstNI CAGNNNCTG 1 cut(s) 2831
PsuI RGATCY 3 cut(s) 827, 2625, 2785
PvuII CAGCTG 2 cut(s) 1333, 2633
RsaI GTAC 8 cut(s) 46, 753, 1056, 1137, 1242, 1840, 2184, 2638
RsaNI GTAC 8 cut(s) 45, 752, 1055, 1136, 1241, 1839, 2183, 2637
SalI GTCGAC 1 cut(s) 2245
SatI GCNGC 5 cut(s) 79, 328, 1334, 1393, 1830
SchI GAGTC 5 cut(s) 421, 875, 1901, 2525, 2657
ScrFI CCNGG 3 cut(s) 591, 2131, 2187
SfaNI GCATC 1 cut(s) 142
SfoI GGCGCC 1 cut(s) 326
Sfr274I CTCGAG 1 cut(s) 2513
SinI GGWCC 9 cut(s) 503, 581, 1013, 1235, 1322, 1504, 2076, 2524, 2933
SlaI CTCGAG 1 cut(s) 2513
SmlI CTYRAG 6 cut(s) 214, 697, 1474, 1667, 2056, 2513
SmoI CTYRAG 6 cut(s) 214, 697, 1474, 1667, 2056, 2513
SpeI ACTAGT 1 cut(s) 1487
SphI GCATGC 2 cut(s) 361, 2312
SsiI CCGC 4 cut(s) 42, 328, 2074, 2547
SspDI GGCGCC 1 cut(s) 324
SspMI CTAG 7 cut(s) 914, 1191, 1488, 1604, 1737, 1922, 1967
StyD4I CCNGG 3 cut(s) 589, 2129, 2185
StyI CCWWGG 1 cut(s) 2415
TaaI ACNGT 6 cut(s) 17, 404, 622, 2251, 2707, 2727
TaiI ACGT 6 cut(s) 243, 313, 724, 1185, 2049, 2977
TaqI TCGA 9 cut(s) 123, 487, 510, 1566, 2246, 2459, 2514, 2799, 2941
TaqII GACCGA 1 cut(s) 53
TatI WGTACW 1 cut(s) 1838
TauI GCSGC 1 cut(s) 330
TscAI CASTG 7 cut(s) 437, 462, 549, 943, 1309, 2260, 2407
TseFI GTSAC 4 cut(s) 1904, 2529, 2727, 2838
TseI GCWGC 4 cut(s) 78, 1333, 1392, 1829
Tsp45I GTSAC 4 cut(s) 1904, 2529, 2727, 2838
TspDTI ATGAA 8 cut(s) 785, 1019, 1195, 1401, 1572, 1643, 2231, 2267
TspGWI ACGGA 3 cut(s) 651, 1086, 2763
TspRI CASTG 7 cut(s) 437, 462, 549, 943, 1309, 2260, 2407
Van91I CCANNNNNTGG 2 cut(s) 1708, 1825
Vha464I CTTAAG 1 cut(s) 1667
VpaK11BI GGWCC 9 cut(s) 503, 581, 1013, 1235, 1322, 1504, 2076, 2524, 2933
VspI ATTAAT 1 cut(s) 1047
XapI RAATTY 6 cut(s) 226, 812, 1174, 2294, 2643, 2761
XbaI TCTAGA 2 cut(s) 1603, 1921
XceI RCATGY 5 cut(s) 361, 904, 2312, 2506, 2951
XhoI CTCGAG 1 cut(s) 2513
XmiI GTMKAC 1 cut(s) 2246
XmnI GAANNNNTTC 2 cut(s) 2274, 2906
XspI CTAG 7 cut(s) 914, 1191, 1488, 1604, 1737, 1922, 1967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.