Rw3G019600

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000047
Physical Location & Seq
Forward (+)
22627637 .. 22631161
3525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019600.1

Sequence Viewer

Length: 2694 bp
ATGCCAACTCTGTTGCTCCATTTCTTCCTTTGCTTAATCACTACCACTGTTACTAACCTCATCCCAGCAGTTCACAGCAACTGTATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAACAAAGTCTTGAATTTGATTCTTCCGAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGAATGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGAGTGTTGTTGGTCTTGACATCAGTAGCGAGTCTATCTCATGCAACATTGACAGTTCCAGCAGTCTGTTCCAACTTCAACATCTTCAGAGCCTCAATATAGCCTATAACAACTTCAATGGCTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATCTGAATTTAAGTAAAGCTTATTTTTCTGGGGTTATTCCCATTGAGATTTCACGCTTAACAAGGCTGATAACTCTTGATCTCTCTGGAAATGGCTACCACTCGTTAGAAGTTGAGAACCCAAATTTATATCTTGATTTTGTAAAGATATCAGGACAGTGGAATGACTGGTGCGAAGCCATATCATCTTCACTGTCAAATCTGAGGGTGTTGAGCATGTCTGATTGTGGTCTTTCAGGCCCTATTTGTGAGTCCCTTGCAAAGCTTCAATCTTTGTATGTGATTGACTTGTCATTTAACTCCTTCTATGCTCCGGTTCCAAGAGTCTTTGCCAATTTTTCAAACTTGACTTACTTGAGTCTTCGTTGTTCCGACTTGCTTGGAACATTTCCCCAAGAGATCTTTCAGATACCTTCCCTACAAACCATTGACCTTTCTGGTAATTTGGCTCTTCATGGTTCCTTTCCAGAATTTCCAAACAATGGGTCTCTTCGATACTTAAGTGTATTTGGGACAAGGTTTTCAGGTGACCTACCCAACTCTATTGGAAATCTTAAGATGTTGTCAAGTGTATATCTTTCAGAGTGCAATTTCACAGGATCAGTTCCCAAGTCGATTGAAAACCTCACACTATTGGCTGACCTGGACATGTCCGGGAACAGATTTAATAGTCCCATTAGTTCTATTCACTGGGAAACCCTTATTAATTTGGAAATCCTCGCTTTGAGCGACAATCAACTCTATGGGACTATTCCTTCATCTGTTGTTTCTCTTCCCATGCTGAACATACTAACACTATCCCACAATCAGTTCTCTGGTCAAGTCCCTGAATTTTCCAATACCTCTTCGCCCTTACTTGAAACCCTTTATTTGGAAAACAACAATTTAGAAGGACACATACCAACATCTATCTTCAATCTTCAAGGGCTTGAGGATCTCAATCTTTCTTCAAACAACTTCAGTGGCTTCCCTTTTAATGGTCCTCAGGTGCCTAGTAATCTTTCGTCACTTGATGTTTCCCACAATAGCTTCAATAACTTTCACGGGGCCATTCCAAAATCAATATGCAATGCAAGTGGTAAGGTTCTTGATCTGTCCAATAATTCCTTAAGTGGAAACATTCCCCAATGCTTGACTCAATTACCTCAGCTTTTGGTCATTGATTTGAAGAGAAACAACCTGAGTGGCACAATTCCGGATAATTTTCTTAACATTTGTGAGCTACAAACTCTAGACCTCAGTAACAATCAGATACAAGGCAAGTTTCCGAAATCTCTTGTCAACTGCTCAAAGTTAGAGGTTTTAAACATTGGAAACAATAACATAGCTGATACTTTTCCATGCTTTTTAATGAGCTTATCCACCTTGCGTGTCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAACATTGGATGTCCCAAGACCAGTGGCACATGGCATGTGCTTCAAATAATAGATTTGGCTCACAACAATTTCAGTGGTGATATGCCAGGAAGAATGCCTCTGACATGGCAGGCTATGGCGTCTAATGAGGATGATTCTCCAACTGAACTTGGATTTTCTTATCAGCCGAGCAGGAATGTTTCTTATGACAGAAAGGGACAAATACCAGGTCCTGACTTTTATTATAGAGATGCAATTACGACTATCATCAAAGGTTTAGAGTTGGATGTGGTTAAGATTTTAACTACATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCACTATATGCCCTCAACTTATCAGGTAATGCTTTCACCGGAAAAATCCCATCATCATTTGGTAAGATGCGGCAATTGGAGTCCTTAGATCTCTCAAAGAACCACTTGAGCGGCCAAATTCCCCCCGAGTTTGCAAAGCTCAATTTCCTTTCGCACTTGAATGTCTCATATAATCAACTGACAGGAAGGATCCCAACCAACACTCAGTTTTCGACATTTCCAAGTACCTCCTTTGAGGGTAATAAAGGATTATGGGGGCCTCCTCTGACATCGGATACCGCAATCGTATTGCCACCTCCAAAGTTTAATGGAAGCTCAAGTAATCTGAATTCTGGAGATGAGATTGATTGGAATGTCATCAGTGCTGAAATTGGATTTACATGTGGGTTTGGTATTGCCGTCGGGTCACTTCTGTTTTGTAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAACATTCTGTTCAAGATATTCCCTCAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

897

Amino Acids

99.38

Weight (kDa)

5.86

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 8.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 229 7e-10 Leucine-rich repeat region
LRR_8 PF13855 219 - 276 3.7e-07 Leucine rich repeat
LRR_8 PF13855 413 - 471 9.1e-06 Leucine rich repeat
LRR_14 PF23598 484 - 590 1e-05 Leucine-rich repeat region
LRR_8 PF13855 489 - 546 3.6e-07 Leucine rich repeat
LRR_8 PF13855 535 - 594 8.8e-08 Leucine rich repeat
LRR_4 PF12799 535 - 572 1.9e-07 Leucine Rich repeats (2 copies)
LRR_14 PF23598 706 - 770 4.1e-06 Leucine-rich repeat region
LRR_8 PF13855 716 - 775 1.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1372
AccB7I CCANNNNNTGG 1 cut(s) 866
AccBSI CCGCTC 1 cut(s) 2256
AccIII TCCGGA 1 cut(s) 1579
AciI CCGC 4 cut(s) 1768, 2215, 2256, 2424
AclWI GGATC 5 cut(s) 991, 1326, 2122, 2329, 2342
AcoI YGGCCR 1 cut(s) 2257
AcsI RAATTY 9 cut(s) 131, 169, 391, 508, 854, 1214, 2105, 2262, 2473
AcuI CTGAAG 2 cut(s) 290, 1327
AcyI GRCGYC 1 cut(s) 1907
AfaI GTAC 2 cut(s) 178, 2371
AfiI CCNNNNNNNGG 4 cut(s) 866, 1255, 1361, 2629
AflII CTTAAG 3 cut(s) 883, 938, 1492
AflIII ACRYGT 2 cut(s) 1032, 2525
AjnI CCWGG 3 cut(s) 1026, 1873, 1993
AjuI GAANNNNNNNTTGG 4 cut(s) 771, 803, 2625, 2657
Alw26I GTCTC 3 cut(s) 876, 2314, 2680
AlwI GGATC 5 cut(s) 991, 1326, 2122, 2329, 2342
AlwNI CAGNNNCTG 2 cut(s) 81, 2000
Ama87I CYCGRG 1 cut(s) 2270
Aor13HI TCCGGA 1 cut(s) 1579
AoxI GGCC 4 cut(s) 622, 1431, 2257, 2402
ApeKI GCWGC 1 cut(s) 210
ApoI RAATTY 9 cut(s) 131, 169, 391, 508, 854, 1214, 2105, 2262, 2473
ArsI GACNNNNNNTTYG 4 cut(s) 854, 886, 1981, 2013
AseI ATTAAT 1 cut(s) 1089
AspS9I GGNCC 6 cut(s) 623, 1364, 1431, 1770, 1997, 2402
AsuC2I CCSGG 1 cut(s) 1039
AsuHPI GGTGA 4 cut(s) 923, 1877, 2071, 2173
AvaI CYCGRG 1 cut(s) 2270
AvaII GGWCC 3 cut(s) 1364, 1770, 1997
AxyI CCTNAGG 2 cut(s) 1368, 2124
BaeI ACNNNNGTAYC 2 cut(s) 871, 904
BamHI GGATCC 1 cut(s) 2334
BanI GGYRCC 1 cut(s) 1372
BarI GAAGNNNNNNTAC 2 cut(s) 1266, 1298
BbsI GAAGAC 1 cut(s) 737
BbvCI CCTCAGC 2 cut(s) 1530, 2625
BbvI GCAGC 1 cut(s) 222
BccI CCATC 3 cut(s) 361, 2203, 2565
BceAI ACGGC 1 cut(s) 2528
BciT130I CCWGG 3 cut(s) 1028, 1875, 1995
BciVI GTATCC 1 cut(s) 2413
BcnI CCSGG 1 cut(s) 1039
BcoDI GTCTC 3 cut(s) 876, 2314, 2680
BfaI CTAG 2 cut(s) 1377, 1616
BfrI CTTAAG 3 cut(s) 883, 938, 1492
BfuI GTATCC 1 cut(s) 2413
BglII AGATCT 2 cut(s) 783, 2233
BisI GCNGC 3 cut(s) 211, 2216, 2257
BlsI GCNGC 3 cut(s) 212, 2217, 2258
Bme1390I CCNGG 4 cut(s) 1028, 1039, 1875, 1995
Bme18I GGWCC 3 cut(s) 1364, 1770, 1997
BmeT110I CYCGRG 1 cut(s) 2270
BmgT120I GGNCC 6 cut(s) 623, 1364, 1431, 1770, 1997, 2402
BmiI GGNNCC 6 cut(s) 702, 844, 1374, 1432, 2336, 2403
BmrFI CCNGG 4 cut(s) 1028, 1039, 1875, 1995
BmrI ACTGGG 1 cut(s) 1084
BmsI GCATC 2 cut(s) 2008, 2202
BmuI ACTGGG 1 cut(s) 1084
BpiI GAAGAC 1 cut(s) 737
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2499
Bpu10I CCTNAGC 2 cut(s) 1530, 2625
BpuEI CTTGAG 4 cut(s) 760, 1334, 2272, 2446
BpuMI CCSGG 1 cut(s) 1039
BsaBI GATNNNNATC 1 cut(s) 1323
BsaHI GRCGYC 1 cut(s) 1907
BsaI GGTCTC 1 cut(s) 876
BsaWI WCCGGW 3 cut(s) 697, 1579, 2183
BsaXI ACNNNNNCTCC 2 cut(s) 2081, 2111
Bsc4I CCNNNNNNNGG 4 cut(s) 866, 1255, 1361, 2629
Bse1I ACTGG 3 cut(s) 557, 1079, 1809
Bse21I CCTNAGG 2 cut(s) 1368, 2124
Bse3DI GCAATG 2 cut(s) 104, 1459
Bse8I GATNNNNATC 1 cut(s) 1323
BseAI TCCGGA 1 cut(s) 1579
BseBI CCWGG 3 cut(s) 1028, 1875, 1995
BseGI GGATG 4 cut(s) 60, 1802, 1924, 2059
BseJI GATNNNNATC 1 cut(s) 1323
BseLI CCNNNNNNNGG 4 cut(s) 866, 1255, 1361, 2629
BseMI GCAATG 2 cut(s) 104, 1459
BseMII CTCAG 8 cut(s) 578, 1382, 1544, 1556, 1636, 2115, 2363, 2639
BseNI ACTGG 3 cut(s) 557, 1079, 1809
BseRI GAGGAG 2 cut(s) 2086, 2397
BseXI GCAGC 1 cut(s) 222
BseYI CCCAGC 1 cut(s) 64
BshFI GGCC 4 cut(s) 624, 1433, 2259, 2404
BshNI GGYRCC 1 cut(s) 1372
BsiHKCI CYCGRG 1 cut(s) 2270
BsiSI CCGG 4 cut(s) 698, 1038, 1580, 2184
BslFI GGGAC 7 cut(s) 622, 910, 1041, 1144, 1193, 1785, 1998
BslI CCNNNNNNNGG 4 cut(s) 866, 1255, 1361, 2629
BsmAI GTCTC 3 cut(s) 876, 2314, 2680
BsmBI CGTCTC 1 cut(s) 2680
BsmFI GGGAC 7 cut(s) 622, 910, 1041, 1144, 1193, 1785, 1998
BsmI GAATGC 2 cut(s) 188, 1887
BsnI GGCC 4 cut(s) 624, 1433, 2259, 2404
Bso31I GGTCTC 1 cut(s) 876
BsoBI CYCGRG 1 cut(s) 2270
Bsp13I TCCGGA 1 cut(s) 1579
Bsp143I GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
BspACI CCGC 4 cut(s) 1768, 2215, 2256, 2424
BspANI GGCC 4 cut(s) 624, 1433, 2259, 2404
BspCNI CTCAG 8 cut(s) 579, 1381, 1543, 1557, 1635, 2116, 2362, 2638
BspEI TCCGGA 1 cut(s) 1579
BspLI GGNNCC 6 cut(s) 702, 844, 1374, 1432, 2336, 2403
BspPI GGATC 5 cut(s) 991, 1326, 2122, 2329, 2342
BspQI GCTCTTC 2 cut(s) 349, 840
BspT107I GGYRCC 1 cut(s) 1372
BspTI CTTAAG 3 cut(s) 883, 938, 1492
BspTNI GGTCTC 1 cut(s) 876
BsrBI CCGCTC 1 cut(s) 2256
BsrDI GCAATG 2 cut(s) 104, 1459
BsrI ACTGG 3 cut(s) 557, 1079, 1809
BssMI GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
BssNI GRCGYC 1 cut(s) 1907
Bst2UI CCWGG 3 cut(s) 1028, 1875, 1995
Bst4CI ACNGT 5 cut(s) 49, 83, 275, 543, 579
Bst6I CTCTTC 6 cut(s) 349, 840, 879, 1161, 1234, 1547
BstACI GRCGYC 1 cut(s) 1907
BstAFI CTTAAG 3 cut(s) 883, 938, 1492
BstC8I GCNNGC 1 cut(s) 1899
BstDEI CTNAG 9 cut(s) 587, 1368, 1530, 1565, 1622, 2124, 2230, 2349, 2625
BstEII GGTNACC 1 cut(s) 911
BstF5I GGATG 4 cut(s) 60, 1802, 1924, 2059
BstKTI GATC 8 cut(s) 466, 786, 986, 1321, 1477, 2117, 2236, 2337
BstMAI GTCTC 3 cut(s) 876, 2314, 2680
BstMBI GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
BstNI CCWGG 3 cut(s) 1028, 1875, 1995
BstNSI RCATGY 5 cut(s) 604, 1036, 1826, 2529, 2663
BstPI GGTNACC 1 cut(s) 911
BstSCI CCNGG 4 cut(s) 1026, 1037, 1873, 1993
BstV1I GCAGC 1 cut(s) 222
BstV2I GAAGAC 1 cut(s) 737
BstX2I RGATCY 4 cut(s) 783, 1318, 2233, 2334
BstYI RGATCY 4 cut(s) 783, 1318, 2233, 2334
Bsu36I CCTNAGG 2 cut(s) 1368, 2124
BsuI GTATCC 1 cut(s) 2413
BsuRI GGCC 4 cut(s) 624, 1433, 2259, 2404
BtsCI GGATG 4 cut(s) 60, 1802, 1924, 2059
BtsIMutI CAGTG 8 cut(s) 45, 548, 575, 1072, 1351, 1816, 1867, 2512
Cac8I GCNNGC 1 cut(s) 1899
CaiI CAGNNNCTG 2 cut(s) 81, 2000
Cfr13I GGNCC 6 cut(s) 623, 1364, 1431, 1770, 1997, 2402
CseI GACGC 1 cut(s) 1896
CsiI ACCWGGT 1 cut(s) 1993
Csp6I GTAC 2 cut(s) 177, 2370
CviQI GTAC 2 cut(s) 177, 2370
DdeI CTNAG 9 cut(s) 587, 1368, 1530, 1565, 1622, 2124, 2230, 2349, 2625
DpnI GATC 8 cut(s) 465, 785, 985, 1320, 1476, 2116, 2235, 2336
DpnII GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
DraI TTTAAA 1 cut(s) 1689
EaeI YGGCCR 1 cut(s) 2257
Eam1104I CTCTTC 6 cut(s) 349, 840, 879, 1161, 1234, 1547
EarI CTCTTC 6 cut(s) 349, 840, 879, 1161, 1234, 1547
Eco31I GGTCTC 1 cut(s) 876
Eco32I GATATC 1 cut(s) 534
Eco47I GGWCC 3 cut(s) 1364, 1770, 1997
Eco57I CTGAAG 2 cut(s) 290, 1327
Eco81I CCTNAGG 2 cut(s) 1368, 2124
Eco88I CYCGRG 1 cut(s) 2270
Eco91I GGTNACC 1 cut(s) 911
EcoO109I RGGNCCY 3 cut(s) 623, 1997, 2402
EcoO65I GGTNACC 1 cut(s) 911
EcoRI GAATTC 2 cut(s) 169, 2473
EcoRII CCWGG 3 cut(s) 1026, 1873, 1993
EcoRV GATATC 1 cut(s) 534
Esp3I CGTCTC 1 cut(s) 2680
FalI AAGNNNNNCTT 4 cut(s) 388, 420, 2234, 2266
FaqI GGGAC 7 cut(s) 622, 910, 1041, 1144, 1193, 1785, 1998
Fnu4HI GCNGC 3 cut(s) 211, 2216, 2257
FokI GGATG 4 cut(s) 47, 1809, 1931, 2066
Fsp4HI GCNGC 3 cut(s) 211, 2216, 2257
FspBI CTAG 2 cut(s) 1377, 1616
GluI GCNGC 3 cut(s) 211, 2216, 2257
GsaI CCCAGC 1 cut(s) 68
GsuI CTGGAG 1 cut(s) 2499
HaeIII GGCC 4 cut(s) 624, 1433, 2259, 2404
HapII CCGG 4 cut(s) 698, 1038, 1580, 2184
HgaI GACGC 1 cut(s) 1896
Hin1I GRCGYC 1 cut(s) 1907
HincII GTYRAC 1 cut(s) 1666
HindII GTYRAC 1 cut(s) 1666
HindIII AAGCTT 4 cut(s) 155, 368, 402, 647
HinfI GANTC 9 cut(s) 137, 146, 251, 635, 708, 742, 1519, 1922, 2225
HpaII CCGG 4 cut(s) 698, 1038, 1580, 2184
HphI GGTGA 4 cut(s) 923, 1877, 2071, 2173
Hpy166II GTNNAC 3 cut(s) 73, 1666, 2665
Hpy8I GTNNAC 3 cut(s) 73, 1666, 2665
Hpy99I CGWCG 1 cut(s) 2549
HpyAV CCTTC 6 cut(s) 697, 807, 1149, 1268, 2325, 2649
HpyCH4III ACNGT 5 cut(s) 49, 83, 275, 543, 579
HpyCH4IV ACGT 1 cut(s) 2689
HpyCH4V TGCA 9 cut(s) 210, 264, 359, 644, 972, 1452, 1457, 2021, 2279
HpyF3I CTNAG 9 cut(s) 587, 1368, 1530, 1565, 1622, 2124, 2230, 2349, 2625
HpySE526I ACGT 1 cut(s) 2689
Hsp92I GRCGYC 1 cut(s) 1907
Kpn2I TCCGGA 1 cut(s) 1579
Kzo9I GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
LguI GCTCTTC 2 cut(s) 349, 840
LmnI GCTCC 3 cut(s) 21, 114, 700
Lsp1109I GCAGC 1 cut(s) 222
LweI GCATC 2 cut(s) 2008, 2202
MabI ACCWGGT 1 cut(s) 1993
MaeI CTAG 2 cut(s) 1377, 1616
MaeII ACGT 1 cut(s) 2689
MaeIII GTNAC 6 cut(s) 49, 202, 911, 1389, 1625, 2550
MalI GATC 8 cut(s) 465, 785, 985, 1320, 1476, 2116, 2235, 2336
MbiI CCGCTC 1 cut(s) 2256
MboI GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
MfeI CAATTG 1 cut(s) 2219
MflI RGATCY 4 cut(s) 783, 1318, 2233, 2334
MlyI GAGTC 6 cut(s) 260, 644, 717, 751, 1513, 2234
MmeI TCCRAC 6 cut(s) 316, 780, 1797, 1952, 2031, 2124
MroI TCCGGA 1 cut(s) 1579
MslI CAYNNNNRTG 1 cut(s) 2304
MspA1I CMGCKG 1 cut(s) 2629
MspCI CTTAAG 3 cut(s) 883, 938, 1492
MspI CCGG 4 cut(s) 698, 1038, 1580, 2184
MspR9I CCNGG 4 cut(s) 1028, 1039, 1875, 1995
MunI CAATTG 1 cut(s) 2219
Mva1269I GAATGC 2 cut(s) 188, 1887
MvaI CCWGG 3 cut(s) 1028, 1875, 1995
NciI CCSGG 1 cut(s) 1039
NdeII GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
NlaIV GGNNCC 6 cut(s) 702, 844, 1374, 1432, 2336, 2403
NmeAIII GCCGAG 1 cut(s) 1980
NmuCI GTSAC 3 cut(s) 911, 1389, 2550
NspI RCATGY 5 cut(s) 604, 1036, 1826, 2529, 2663
PciI ACATGT 2 cut(s) 1032, 2525
PciSI GCTCTTC 2 cut(s) 349, 840
PcsI WCGNNNNNNNCGW 1 cut(s) 1110
PctI GAATGC 2 cut(s) 188, 1887
PfeI GAWTC 3 cut(s) 137, 146, 1922
PflMI CCANNNNNTGG 1 cut(s) 866
PfoI TCCNGGA 1 cut(s) 1037
PkrI GCNGC 3 cut(s) 212, 2217, 2258
PleI GAGTC 6 cut(s) 259, 643, 716, 750, 1513, 2233
PpsI GAGTC 6 cut(s) 259, 643, 716, 750, 1513, 2233
PpuMI RGGWCCY 1 cut(s) 1997
PscI ACATGT 2 cut(s) 1032, 2525
PshBI ATTAAT 1 cut(s) 1089
Psp5II RGGWCCY 1 cut(s) 1997
Psp6I CCWGG 3 cut(s) 1026, 1873, 1993
PspEI GGTNACC 1 cut(s) 911
PspFI CCCAGC 1 cut(s) 64
PspGI CCWGG 3 cut(s) 1026, 1873, 1993
PspN4I GGNNCC 6 cut(s) 702, 844, 1374, 1432, 2336, 2403
PspPI GGNCC 6 cut(s) 623, 1364, 1431, 1770, 1997, 2402
PspPPI RGGWCCY 1 cut(s) 1997
PstNI CAGNNNCTG 2 cut(s) 81, 2000
PsuI RGATCY 4 cut(s) 783, 1318, 2233, 2334
PvuII CAGCTG 1 cut(s) 2629
RsaI GTAC 2 cut(s) 178, 2371
RsaNI GTAC 2 cut(s) 177, 2370
RseI CAYNNNNRTG 1 cut(s) 2304
SapI GCTCTTC 2 cut(s) 349, 840
SatI GCNGC 3 cut(s) 211, 2216, 2257
Sau3AI GATC 8 cut(s) 463, 783, 983, 1318, 1474, 2114, 2233, 2334
Sau96I GGNCC 6 cut(s) 623, 1364, 1431, 1770, 1997, 2402
SchI GAGTC 6 cut(s) 260, 644, 717, 751, 1513, 2234
ScrFI CCNGG 4 cut(s) 1028, 1039, 1875, 1995
SexAI ACCWGGT 1 cut(s) 1993
SfaNI GCATC 2 cut(s) 2008, 2202
SinI GGWCC 3 cut(s) 1364, 1770, 1997
SmiMI CAYNNNNRTG 1 cut(s) 2304
SmlI CTYRAG 7 cut(s) 739, 883, 938, 1313, 1492, 2251, 2461
SmoI CTYRAG 7 cut(s) 739, 883, 938, 1313, 1492, 2251, 2461
SsiI CCGC 4 cut(s) 1768, 2215, 2256, 2424
SspMI CTAG 2 cut(s) 1377, 1616
StyD4I CCNGG 4 cut(s) 1026, 1037, 1873, 1993
TaaI ACNGT 5 cut(s) 49, 83, 275, 543, 579
TaiI ACGT 1 cut(s) 2692
TaqI TCGA 4 cut(s) 173, 877, 998, 2357
TauI GCSGC 2 cut(s) 2218, 2259
TfiI GAWTC 3 cut(s) 137, 146, 1922
TscAI CASTG 8 cut(s) 52, 548, 582, 1079, 1351, 1816, 1867, 2512
TseFI GTSAC 3 cut(s) 911, 1389, 2550
TseI GCWGC 1 cut(s) 210
Tsp45I GTSAC 3 cut(s) 911, 1389, 2550
TspDTI ATGAA 2 cut(s) 827, 1131
TspGWI ACGGA 1 cut(s) 2127
TspRI CASTG 8 cut(s) 52, 548, 582, 1079, 1351, 1816, 1867, 2512
Van91I CCANNNNNTGG 1 cut(s) 866
Vha464I CTTAAG 3 cut(s) 883, 938, 1492
VpaK11BI GGWCC 3 cut(s) 1364, 1770, 1997
VspI ATTAAT 1 cut(s) 1089
XapI RAATTY 9 cut(s) 131, 169, 391, 508, 854, 1214, 2105, 2262, 2473
XbaI TCTAGA 1 cut(s) 1615
XceI RCATGY 5 cut(s) 604, 1036, 1826, 2529, 2663
XspI CTAG 2 cut(s) 1377, 1616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.