Rw2G052980

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
80863446 .. 80866871
3426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G052980.1

Sequence Viewer

Length: 3426 bp
ATGCCCACTCCGTTCCTCCCTTTCTTCCTTTTCTTATTCACTACCACTGTTACTAACCTCATCACCGCAGTTCACAGCAACTGTATTGAAGCCCAGCAACAATCATTGCTCCATTTCAGGAAAAGTCTTGGATTTGATACTTCCAATTCCTTCAAGCTCATAACATGGAATTCGAGTACCGAATGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGAATGTTGTTGGTCTTGACATCAGCAGCGAGTCTATCTCATGTAACATTGACAATTCCAGCAGTCTGTTCCAACTTCAACATCTTCAGAGCCTCAATTTAGCCCATACTAACTTCAATGGCTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATCTGAATTTAAGTCAAGCTTATTTTTCTGGTCATATTCCCATTGAAATTTCACGCTTAACAAGGCTAGTAACTCTTGATCTCTCTGGAAATTTATACTTGTCGTTAGAAGTTGAGAACCTGAATTTAAGCATGCCAATTCAGAACCTCACAGAGCTTACGGAGTTATATCTTGATGCAATAAATATATCAGGACAGGGGAGTGACTGGTGCGAAGCCATATCATCTTCACTGCCAAATCTGAGGGTGATGAGCTTGTCTGGCTGTGGTCTTTCAGGCCCAATTTGTGAGTCCCTTGCAAAGCTTCAATCTCTGTATGAGATTGACTTGTCACAAAACTCGTTCTATGCTCCGGTTCCAAGAGTCTTTGCCAAATTTTCAAACTTGACTTACTTGAGTCTTGGTTATTCTAACTTGCTCGGAACATTTCCCAAAGAGATCTTTCAGATACCTTCCCTACAAACCATTGACCTTTCCTCTAATGTTGATCTTCATGGTTCCTTTCCAGAATTTCCAAACAATGGCTCCCTTAGATCCTTGGTTGTAGATAGGACAAGTTTTTCGGGTGACGTACCCAACTCTATTGGAAATCTTAAGATGCTTTCAACCATAGATCTTTCCGATTGCAATTTCACTGAATCAGTTCCCAAGTCGATTGAAAACCTCACACAATTGGCTTCTTTGGACATGTCAGGGAACAGATTTAATAGTCCCATTAGTTCTATTCATTGGGAAACACTTGTTAATCTGAAAATCCTCCGTTTGAGCAACAATCAACTCTATGGGACTATTCCTTCATCTGTTGTTTCTCTTCCCAAACTGGAAATATTAACACTATCCCACAATCGGTTCTCTGGTCAAGTCCCTGAATTTTCCAATACCTCTTCGCATTTAATTGACACCCTTGATTTGGAAAACAACAATCTGGAAGGACAAATACCAACATCTATCTTCAATCTTCAAGGGCTTCTGTATCTCAATCTTTCTTCAAACAACTTCAGTAGCTTTCCTTTTAATGGTCCTCGGCTACCCAGAGATCTTTCATCGGTTGATCTTTCCCACAATAGCTTGCTGATTGATTACAATGGTACAAGTTCCTCCTCCCTTCAGATTGAAAACTTGCATTTGGCTTCTAACAAGTTGAGAGCATTCCCAGATTTCTTGAGAAATCAATCCACATTAGAGTACTTGGACCTTTCAAACAACCAGATTCAAGGCGAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTTATACCCTTGATCTTTCATGCAACTCCTTGGCAAGTCTAGAAGCTCCTCTTCCTCCTAATTTTACTTCTGCTTTATTTTCTCTAGACCTTCATTCCAACAAGCTTCAGGGTATCCATTCCTCATATTCCTTCCTTCAGGTTGTTCAATTGGGATTAGCTTCTAACAAGTTGACAACATTCCCAGACTTCTTGAGAAATCAATCCCGTTTAACCAACTTGGACCTCTCAGACAACCAGATTCAAGGACAGATACCCAATTGGATTTGGGGTAGTTCCGATTTTCCTCGGGAAATAAATCTTTCTTGTAACTCCTTGGTAACTCTACAAGCTCCACTACGTAATTCTACTCGTCTTGTGTCATCGGTTGATCTTCATTCAAACCAGCTTCAGGGACAGATCCCCTTGTTCTTAAGTCGTATTTATGTGGATTACTCAAGAAATAATTTCAACTCTAGTATACCGACTGACATTGGTGATTTCATCTATTCTGTGTCTTACCTTTCTCTCTCAAGCAATAACTTTCACGGTGCCATTCCAAAATCAATATGCAATGCAAGTGATATGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGAAGCATTCCCCAATGCTTGACTCAAGTATCTGCGCTTTCGGTCATTGATTTGAGTAGAAACAACTTGAGTGGCACAATTCCTGATAATTTTCTCAAGGACTGTTTGTTAACAACTCTAGACCTCAGCAACAATCAGATACAAGGCCGGATTCCGAAATCTCTTGTCAACTGCTCAAGGTTAGAGGTTTTAAACATTGGAAACAATAACATAACTGATACTTTTCCATGCTTTTTAATGAGTATATCCACCTTGCGTATCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAGCATTAGATGTCCCAAGACCAATGACACCTGGCCTGTGCTTCAAATAATAGATTTAGCTCACAACAATTTCAGCGGTGATATGCCAGGAAGAATGTTTCTGACATTGCAGGCTATGGTGTCTAATGAAGATGATTCTCCAACTCAACTTGGATATTCTAATCAGCCGGGCGGGAGTTCTAGAAATTATTATTGGTATACTAGTGCCTTTGGTAATGGTGGTGATGACGTATATTATAGAAATGCAATTACGACTATCATCAAAGGTTTAGAGTTGGATGTGGTTAAGATTCTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCATTATATGTCCTCAACTTATCTGGTAATGCTTTCACCGGAAAAATCCCATCATCATTTGGTAAGATGCGACAACTGGAGTCTTTAGATCTCTCAAACAACCACTTGAGCGGCCAAATTCCCCCACAGTTTGCAAGTCTCACTTTCCTTGCATTCTTGAATCTCTCAAATAATGAACTGGTTGGGAAGATCCCAACTAGCACTCAAATTTCAACATTTCCAAATACCTCCTTCGAAGGTAACAAAGGATTATGGGGGCCTCCTTTGACAATGGATGCAGTATTGCTGCCACCAATTTCAAATGGAAGCTCAAGTAATCCGAATTCTGGAGATGAGATTGATTGGGATATTATCTGTGTTGAAATTGGATTTACATGTGGTTTTGGAATTGCCATTGGGTCACTTTTGTTTTGCAAAAGATGGAGAAAATGGTATTACAGAGCCATGCGTAGTATTTTGTTCAAGATATTCCCTCAGCTGGAGCAAAGATTTGGTAATCATAGAAGACACGTGTACGTAAACACAAGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1141

Amino Acids

126.41

Weight (kDa)

5.51

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 3.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 237 7.1e-10 Leucine-rich repeat region
LRR_8 PF13855 232 - 289 3e-07 Leucine rich repeat
LRR_14 PF23598 304 - 360 1.9e-06 Leucine-rich repeat region
LRR_8 PF13855 499 - 556 2.3e-06 Leucine rich repeat
LRR_4 PF12799 521 - 560 5e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 781 - 839 7.5e-07 Leucine rich repeat
LRR_4 PF12799 781 - 817 4.2e-07 Leucine Rich repeats (2 copies)
LRR_14 PF23598 955 - 1020 1.6e-06 Leucine-rich repeat region
LRR_8 PF13855 965 - 1024 1.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2165
AccB7I CCANNNNNTGG 1 cut(s) 905
AccBSI CCGCTC 1 cut(s) 3003
AccI GTMKAC 2 cut(s) 2095, 2720
AciI CCGC 5 cut(s) 66, 2503, 2598, 2694, 3003
AclWI GGATC 4 cut(s) 912, 2029, 2869, 3076
AcoI YGGCCR 1 cut(s) 3004
AcuI CTGAAG 6 cut(s) 290, 1366, 1475, 1727, 1757, 2009
AcvI CACGTG 1 cut(s) 3403
AfaI GTAC 5 cut(s) 178, 957, 1474, 1571, 3407
AfiI CCNNNNNNNGG 7 cut(s) 905, 1230, 1294, 1400, 2026, 3218, 3370
AflII CTTAAG 2 cut(s) 977, 2047
AflIII ACRYGT 4 cut(s) 1071, 3266, 3400, 3402
AhlI ACTAGT 1 cut(s) 2723
AjnI CCWGG 2 cut(s) 2552, 2608
AjuI GAANNNNNNNTTGG 2 cut(s) 2698, 2730
Alw26I GTCTC 2 cut(s) 1631, 3035
AlwI GGATC 4 cut(s) 912, 2029, 2869, 3076
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 1923
AoxI GGCC 5 cut(s) 661, 2377, 2555, 3004, 3149
ApeKI GCWGC 3 cut(s) 210, 246, 3178
ArsI GACNNNNNNTTYG 2 cut(s) 928, 960
Asp700I GAANNNNTTC 1 cut(s) 1026
AspLEI GCGC 1 cut(s) 2269
AspS9I GGNCC 6 cut(s) 662, 1403, 1576, 1858, 2505, 3149
AsuC2I CCSGG 1 cut(s) 2691
AsuHPI GGTGA 8 cut(s) 55, 643, 962, 2123, 2612, 2756, 2818, 2920
AsuII TTCGAA 1 cut(s) 3126
AvaI CYCGRG 1 cut(s) 1923
AvaII GGWCC 4 cut(s) 1403, 1576, 1858, 2505
AxyI CCTNAGG 1 cut(s) 2871
BaeI ACNNNNGTAYC 2 cut(s) 2244, 2277
BanI GGYRCC 1 cut(s) 2165
BarI GAAGNNNNNNTAC 2 cut(s) 1305, 1337
BbrPI CACGTG 1 cut(s) 3403
BbsI GAAGAC 1 cut(s) 3403
BbvCI CCTCAGC 2 cut(s) 2357, 3366
BbvI GCAGC 3 cut(s) 222, 258, 3165
BccI CCATC 3 cut(s) 361, 2950, 3306
BciT130I CCWGG 2 cut(s) 2554, 2610
BciVI GTATCC 2 cut(s) 1760, 2501
BcnI CCSGG 1 cut(s) 2691
BcoDI GTCTC 2 cut(s) 1631, 3035
BcuI ACTAGT 1 cut(s) 2723
BfaI CTAG 8 cut(s) 452, 1676, 1721, 2091, 2351, 2703, 2724, 3090
BfrI CTTAAG 2 cut(s) 977, 2047
BfuI GTATCC 2 cut(s) 1760, 2501
BglII AGATCT 4 cut(s) 822, 997, 1420, 2980
BisI GCNGC 4 cut(s) 211, 247, 3004, 3179
BlsI GCNGC 4 cut(s) 212, 248, 3005, 3180
BmcAI AGTACT 1 cut(s) 1571
Bme1390I CCNGG 3 cut(s) 2554, 2610, 2691
Bme18I GGWCC 4 cut(s) 1403, 1576, 1858, 2505
BmeT110I CYCGRG 1 cut(s) 1923
BmgT120I GGNCC 6 cut(s) 662, 1403, 1576, 1858, 2505, 3149
BmiI GGNNCC 5 cut(s) 741, 883, 910, 2167, 3150
BmrFI CCNGG 3 cut(s) 2554, 2610, 2691
BmsI GCATC 4 cut(s) 550, 972, 2949, 3157
BpiI GAAGAC 1 cut(s) 3403
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 3 cut(s) 2990, 3240, 3392
Bpu10I CCTNAGC 2 cut(s) 2357, 3366
Bpu14I TTCGAA 1 cut(s) 3126
BpuMI CCSGG 1 cut(s) 2691
BsaAI YACGTR 3 cut(s) 1976, 3403, 3409
BsaJI CCNNGG 5 cut(s) 921, 1406, 1665, 1922, 1950
BsaWI WCCGGW 2 cut(s) 736, 2930
BsaXI ACNNNNNCTCC 4 cut(s) 893, 923, 2828, 2858
Bsc4I CCNNNNNNNGG 7 cut(s) 905, 1230, 1294, 1400, 2026, 3218, 3370
Bse1I ACTGG 4 cut(s) 596, 1209, 2973, 3075
Bse21I CCTNAGG 1 cut(s) 2871
Bse3DI GCAATG 3 cut(s) 104, 2194, 2627
BseBI CCWGG 2 cut(s) 2554, 2610
BseDI CCNNGG 5 cut(s) 921, 1406, 1665, 1922, 1950
BseGI GGATG 2 cut(s) 2806, 3172
BseLI CCNNNNNNNGG 7 cut(s) 905, 1230, 1294, 1400, 2026, 3218, 3370
BseMI GCAATG 3 cut(s) 104, 2194, 2627
BseMII CTCAG 5 cut(s) 617, 1878, 2371, 2862, 3380
BseNI ACTGG 4 cut(s) 596, 1209, 2973, 3075
BseRI GAGGAG 3 cut(s) 1474, 1674, 2833
BseXI GCAGC 3 cut(s) 222, 258, 3165
BseYI CCCAGC 1 cut(s) 93
BshFI GGCC 5 cut(s) 663, 2379, 2557, 3006, 3151
BshNI GGYRCC 1 cut(s) 2165
BsiHKCI CYCGRG 1 cut(s) 1923
BsiSI CCGG 4 cut(s) 737, 2380, 2690, 2931
BslFI GGGAC 6 cut(s) 661, 1080, 1183, 1232, 2043, 2520
BslI CCNNNNNNNGG 7 cut(s) 905, 1230, 1294, 1400, 2026, 3218, 3370
BsmAI GTCTC 2 cut(s) 1631, 3035
BsmFI GGGAC 6 cut(s) 661, 1080, 1183, 1232, 2043, 2520
BsmI GAATGC 4 cut(s) 188, 1532, 2238, 3044
BsnI GGCC 5 cut(s) 663, 2379, 2557, 3006, 3151
BsoBI CYCGRG 1 cut(s) 1923
Bsp119I TTCGAA 1 cut(s) 3126
BspACI CCGC 5 cut(s) 66, 2503, 2598, 2694, 3003
BspANI GGCC 5 cut(s) 663, 2379, 2557, 3006, 3151
BspCNI CTCAG 5 cut(s) 618, 1877, 2370, 2863, 3379
BspLI GGNNCC 5 cut(s) 741, 883, 910, 2167, 3150
BspPI GGATC 4 cut(s) 912, 2029, 2869, 3076
BspQI GCTCTTC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 3126
BspT107I GGYRCC 1 cut(s) 2165
BspTI CTTAAG 2 cut(s) 977, 2047
BsrBI CCGCTC 1 cut(s) 3003
BsrDI GCAATG 3 cut(s) 104, 2194, 2627
BsrI ACTGG 4 cut(s) 596, 1209, 2973, 3075
BssECI CCNNGG 5 cut(s) 921, 1406, 1665, 1922, 1950
BssNAI GTATAC 2 cut(s) 2096, 2721
BssT1I CCWWGG 3 cut(s) 921, 1665, 1950
Bst1107I GTATAC 2 cut(s) 2096, 2721
Bst2UI CCWGG 2 cut(s) 2554, 2610
Bst4CI ACNGT 5 cut(s) 49, 83, 2165, 2336, 3021
Bst6I CTCTTC 4 cut(s) 349, 1200, 1273, 1692
BstAFI CTTAAG 2 cut(s) 977, 2047
BstBAI YACGTR 3 cut(s) 1976, 3403, 3409
BstBI TTCGAA 1 cut(s) 3126
BstC8I GCNNGC 3 cut(s) 518, 1454, 2634
BstDEI CTNAG 6 cut(s) 626, 914, 1864, 2357, 2871, 3366
BstF5I GGATG 2 cut(s) 2806, 3172
BstHHI GCGC 1 cut(s) 2269
BstMAI GTCTC 2 cut(s) 1631, 3035
BstMWI GCNNNNNNNGC 1 cut(s) 645
BstNI CCWGG 2 cut(s) 2554, 2610
BstNSI RCATGY 3 cut(s) 520, 1075, 3270
BstSCI CCNGG 3 cut(s) 2552, 2608, 2689
BstSNI TACGTA 2 cut(s) 1976, 3409
BstV1I GCAGC 3 cut(s) 222, 258, 3165
BstV2I GAAGAC 1 cut(s) 3403
BstX2I RGATCY 7 cut(s) 822, 917, 997, 1420, 2034, 2980, 3081
BstYI RGATCY 7 cut(s) 822, 917, 997, 1420, 2034, 2980, 3081
BstZ17I GTATAC 2 cut(s) 2096, 2721
Bsu36I CCTNAGG 1 cut(s) 2871
BsuI GTATCC 2 cut(s) 1760, 2501
BsuRI GGCC 5 cut(s) 663, 2379, 2557, 3006, 3151
BtsCI GGATG 2 cut(s) 2806, 3172
BtsI GCAGTG 1 cut(s) 614
BtsIMutI CAGTG 3 cut(s) 45, 614, 1017
Cac8I GCNNGC 3 cut(s) 518, 1454, 2634
CaiI CAGNNNCTG 1 cut(s) 81
CfoI GCGC 1 cut(s) 2269
Cfr13I GGNCC 6 cut(s) 662, 1403, 1576, 1858, 2505, 3149
Csp6I GTAC 5 cut(s) 177, 956, 1473, 1570, 3406
CspCI CAANNNNNGTGG 2 cut(s) 2284, 2319
CviAII CATG 9 cut(s) 165, 261, 517, 878, 1072, 1656, 2460, 3267, 3337
CviQI GTAC 5 cut(s) 177, 956, 1473, 1570, 3406
DdeI CTNAG 6 cut(s) 626, 914, 1864, 2357, 2871, 3366
DraI TTTAAA 1 cut(s) 2424
EaeI YGGCCR 1 cut(s) 3004
Eam1104I CTCTTC 4 cut(s) 349, 1200, 1273, 1692
EarI CTCTTC 4 cut(s) 349, 1200, 1273, 1692
Eco105I TACGTA 2 cut(s) 1976, 3409
Eco130I CCWWGG 3 cut(s) 921, 1665, 1950
Eco47I GGWCC 4 cut(s) 1403, 1576, 1858, 2505
Eco57I CTGAAG 6 cut(s) 290, 1366, 1475, 1727, 1757, 2009
Eco72I CACGTG 1 cut(s) 3403
Eco81I CCTNAGG 1 cut(s) 2871
Eco88I CYCGRG 1 cut(s) 1923
EcoO109I RGGNCCY 1 cut(s) 3149
EcoRI GAATTC 2 cut(s) 169, 3214
EcoRII CCWGG 2 cut(s) 2552, 2608
EcoT14I CCWWGG 3 cut(s) 921, 1665, 1950
ErhI CCWWGG 3 cut(s) 921, 1665, 1950
FaeI CATG 9 cut(s) 168, 264, 520, 881, 1075, 1659, 2463, 3270, 3340
FalI AAGNNNNNCTT 6 cut(s) 388, 420, 1671, 1703, 3019, 3051
FaqI GGGAC 6 cut(s) 661, 1080, 1183, 1232, 2043, 2520
FatI CATG 9 cut(s) 164, 260, 516, 877, 1071, 1655, 2459, 3266, 3336
FauI CCCGC 1 cut(s) 2687
FblI GTMKAC 2 cut(s) 2095, 2720
Fnu4HI GCNGC 4 cut(s) 211, 247, 3004, 3179
FokI GGATG 2 cut(s) 2813, 3179
Fsp4HI GCNGC 4 cut(s) 211, 247, 3004, 3179
FspBI CTAG 8 cut(s) 452, 1676, 1721, 2091, 2351, 2703, 2724, 3090
GlaI GCGC 1 cut(s) 2268
GluI GCNGC 4 cut(s) 211, 247, 3004, 3179
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 3 cut(s) 2990, 3240, 3392
HaeIII GGCC 5 cut(s) 663, 2379, 2557, 3006, 3151
HapII CCGG 4 cut(s) 737, 2380, 2690, 2931
HhaI GCGC 1 cut(s) 2269
Hin1II CATG 9 cut(s) 168, 264, 520, 881, 1075, 1659, 2463, 3270, 3340
Hin6I GCGC 1 cut(s) 2267
HinP1I GCGC 1 cut(s) 2267
HincII GTYRAC 3 cut(s) 1809, 2343, 2401
HindII GTYRAC 3 cut(s) 1809, 2343, 2401
HindIII AAGCTT 4 cut(s) 368, 402, 686, 1739
HpaI GTTAAC 1 cut(s) 2343
HpaII CCGG 4 cut(s) 737, 2380, 2690, 2931
HphI GGTGA 8 cut(s) 55, 643, 962, 2123, 2612, 2756, 2818, 2920
Hpy166II GTNNAC 8 cut(s) 73, 1809, 2096, 2343, 2401, 2721, 3406, 3412
Hpy8I GTNNAC 8 cut(s) 73, 1809, 2096, 2343, 2401, 2721, 3406, 3412
HpyCH4III ACNGT 5 cut(s) 49, 83, 2165, 2336, 3021
HpyCH4IV ACGT 5 cut(s) 954, 1975, 2751, 3402, 3408
HpyF10VI GCNNNNNNNGC 1 cut(s) 645
HpyF3I CTNAG 6 cut(s) 626, 914, 1864, 2357, 2871, 3366
HpySE526I ACGT 5 cut(s) 954, 1975, 2751, 3402, 3408
Hsp92II CATG 9 cut(s) 168, 264, 520, 881, 1075, 1659, 2463, 3270, 3340
HspAI GCGC 1 cut(s) 2267
KspAI GTTAAC 1 cut(s) 2343
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 6 cut(s) 114, 739, 914, 1687, 1972, 3373
Lsp1109I GCAGC 3 cut(s) 222, 258, 3165
LweI GCATC 4 cut(s) 550, 972, 2949, 3157
MaeI CTAG 8 cut(s) 452, 1676, 1721, 2091, 2351, 2703, 2724, 3090
MaeII ACGT 5 cut(s) 954, 1975, 2751, 3402, 3408
MbiI CCGCTC 1 cut(s) 3003
MfeI CAATTG 3 cut(s) 1055, 1784, 1894
MflI RGATCY 7 cut(s) 822, 917, 997, 1420, 2034, 2980, 3081
MlyI GAGTC 7 cut(s) 260, 683, 756, 790, 1633, 2248, 2981
MmeI TCCRAC 6 cut(s) 316, 1758, 2532, 2687, 2778, 2871
MroXI GAANNNNTTC 1 cut(s) 1026
MspA1I CMGCKG 2 cut(s) 2598, 3370
MspCI CTTAAG 2 cut(s) 977, 2047
MspI CCGG 4 cut(s) 737, 2380, 2690, 2931
MspR9I CCNGG 3 cut(s) 2554, 2610, 2691
MunI CAATTG 3 cut(s) 1055, 1784, 1894
Mva1269I GAATGC 4 cut(s) 188, 1532, 2238, 3044
MvaI CCWGG 2 cut(s) 2554, 2610
MwoI GCNNNNNNNGC 1 cut(s) 645
NciI CCSGG 1 cut(s) 2691
NlaIII CATG 9 cut(s) 168, 264, 520, 881, 1075, 1659, 2463, 3270, 3340
NlaIV GGNNCC 5 cut(s) 741, 883, 910, 2167, 3150
NmeAIII GCCGAG 1 cut(s) 1387
NmuCI GTSAC 4 cut(s) 587, 714, 950, 3291
NspI RCATGY 3 cut(s) 520, 1075, 3270
NspV TTCGAA 1 cut(s) 3126
PaeI GCATGC 1 cut(s) 520
PciI ACATGT 2 cut(s) 1071, 3266
PciSI GCTCTTC 1 cut(s) 349
PctI GAATGC 4 cut(s) 188, 1532, 2238, 3044
PdmI GAANNNNTTC 1 cut(s) 1026
PfeI GAWTC 7 cut(s) 1022, 1594, 1876, 2383, 2657, 2812, 3052
PflMI CCANNNNNTGG 1 cut(s) 905
PkrI GCNGC 4 cut(s) 212, 248, 3005, 3180
PleI GAGTC 7 cut(s) 259, 682, 755, 789, 1632, 2248, 2980
PmaCI CACGTG 1 cut(s) 3403
PmlI CACGTG 1 cut(s) 3403
PpsI GAGTC 7 cut(s) 259, 682, 755, 789, 1632, 2248, 2980
Ppu21I YACGTR 3 cut(s) 1976, 3403, 3409
PscI ACATGT 2 cut(s) 1071, 3266
Psp6I CCWGG 2 cut(s) 2552, 2608
PspCI CACGTG 1 cut(s) 3403
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 2 cut(s) 2552, 2608
PspN4I GGNNCC 5 cut(s) 741, 883, 910, 2167, 3150
PspPI GGNCC 6 cut(s) 662, 1403, 1576, 1858, 2505, 3149
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 7 cut(s) 822, 917, 997, 1420, 2034, 2980, 3081
PvuII CAGCTG 1 cut(s) 3370
RsaI GTAC 5 cut(s) 178, 957, 1474, 1571, 3407
RsaNI GTAC 5 cut(s) 177, 956, 1473, 1570, 3406
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 4 cut(s) 211, 247, 3004, 3179
Sau96I GGNCC 6 cut(s) 662, 1403, 1576, 1858, 2505, 3149
ScaI AGTACT 1 cut(s) 1571
SchI GAGTC 7 cut(s) 260, 683, 756, 790, 1633, 2248, 2981
ScrFI CCNGG 3 cut(s) 2554, 2610, 2691
SfaNI GCATC 4 cut(s) 550, 972, 2949, 3157
SfuI TTCGAA 1 cut(s) 3126
SinI GGWCC 4 cut(s) 1403, 1576, 1858, 2505
SnaBI TACGTA 2 cut(s) 1976, 3409
SpeI ACTAGT 1 cut(s) 2723
SphI GCATGC 1 cut(s) 520
SsiI CCGC 5 cut(s) 66, 2503, 2598, 2694, 3003
SspI AATATT 1 cut(s) 1212
SspMI CTAG 8 cut(s) 452, 1676, 1721, 2091, 2351, 2703, 2724, 3090
StyD4I CCNGG 3 cut(s) 2552, 2608, 2689
StyI CCWWGG 3 cut(s) 921, 1665, 1950
TaaI ACNGT 5 cut(s) 49, 83, 2165, 2336, 3021
TaiI ACGT 5 cut(s) 957, 1978, 2754, 3405, 3411
TaqI TCGA 3 cut(s) 173, 1037, 3126
TaqII GACCGA 1 cut(s) 2263
TatI WGTACW 1 cut(s) 1569
TauI GCSGC 1 cut(s) 3006
TfiI GAWTC 7 cut(s) 1022, 1594, 1876, 2383, 2657, 2812, 3052
TscAI CASTG 3 cut(s) 52, 621, 1024
TseFI GTSAC 4 cut(s) 587, 714, 950, 3291
TseI GCWGC 3 cut(s) 210, 246, 3178
Tsp45I GTSAC 4 cut(s) 587, 714, 950, 3291
TspGWI ACGGA 3 cut(s) 560, 1133, 2874
TspRI CASTG 3 cut(s) 52, 621, 1024
Van91I CCANNNNNTGG 1 cut(s) 905
Vha464I CTTAAG 2 cut(s) 977, 2047
VpaK11BI GGWCC 4 cut(s) 1403, 1576, 1858, 2505
XbaI TCTAGA 4 cut(s) 1675, 1720, 2350, 2702
XceI RCATGY 3 cut(s) 520, 1075, 3270
XmiI GTMKAC 2 cut(s) 2095, 2720
XmnI GAANNNNTTC 1 cut(s) 1026
XspI CTAG 8 cut(s) 452, 1676, 1721, 2091, 2351, 2703, 2724, 3090
ZrmI AGTACT 1 cut(s) 1571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.