Rh3CG246300

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
23737970 .. 23762904
24935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG246300.1

Sequence Viewer

Length: 2574 bp
ATGAACAGCCCCACAGCCGTGTCAGCAAAGGCTTTACTGGCGTTGGTTGGCAACGACACTCAGCCAAGTCAACGTGGTCAAGGCCGGCGCTGGTGTGGCTATGACTTTGAGCTTCTATCTAACCGCGCACTCTCCTCCATTAAAAACACCAACCACAATGGCACTATGGTTAGGGATTTCAAACACTGGAGCTGGAAATTTTGGGATTCACTTGCAGTACTTGCACATTTTGTGAAACTCTTCGTCTGCTACACTAAACAAAGGGAGGTGGAATCAGAAAGGATAGAGAAGATGCCGGAGGAACATGCTGCCGTGAACCTGCTTTCTAACTGTGCTCGAGGCTCGACATGTGCATTTGCTATTGCATTTGTGCTTAAAATAACATCACTGGCAGATTCATTGGCAGATATGCTTCGTGGTTCCTTACCGGAGTTTCCGAAGAATGGATCTCTCGAATCCCTAGTTCTATCCCAGACTAAATTTTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTAAAAAGCTGTCTGAATTAGATCTTTCAGAGTGCAATTTCACAGGAGCAGTTCCAAAGTCACTGGAAAACCTAACACAATTGGGGGATTTGGCCTTGTCATACAACAAGTTTTCTGGTCCGATTAATTCCATTCAATGGGAAAAACTCATCAAGCTTGACAGTCTCGACTTGGCCAACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTTTCTATTCCCTTGCTGCAGAGGTTAGATCTTTCTGGAAATAACTTCTCTGGTCAATTGCTTGAATTTTCTAATGTCTCTTCGCACTTGCTAGAAGAACTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCCGTGTCTATCTTTAATCTTCCAGGGCTTCAGGAGTTTAATCTTTCTTCAAACAACTTGAGTGGTTTTCCTTTTTATGGCCTTCCGGAGTCGAGAAATCTTTCTTCTCTTGATCTATCCTTCAATAGCTTGTTGTTCAATCATAATGGTACTAACTCATCACACCCCTCCCTCCTTCAGATTAAAACCCTGAAGTTGGCTTCTAACAAGTTGAAAACATTCCCAAATTTCTTGAAAAATCTATCTTATTTAACCGACTTGGACCTTTCAGACAACCAAATTCCAGGTCAGATACCCAATTGGATTTGGGAGCTTCATCTCGAGAATCTATATCTATGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACCTGGTTCTACTTACCATCTGATGATTCTTGATCTTCACTCAAACCAGATTCAGGGACAAATACCATTGTTTCTAAGTGGTAATTATTTGGATTACTCAGGAAATAATTTCAGCTCTAGTATGCCAATTGACATTGGTGACATCACCAATTCCACGGGCTACCTTTCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAAAATCAATATGCAGTGCAAGTAATGTAATTCTTGATCTCTCTAATAACTCTTTGAGAGGAACCATTCCCCAATGCTTGACTCAGACTTCTCTTTCTGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCTGATACTTTTCTTGAAGGTACATCATTGACAACATGGCAGGCAATGGTGGTTAATGAAGATGGTTACCAAATTCACCATAGCTATAAGTGGGTACCACCAGGTAGTGAAATTGTGTCCTCTGCTGGAACTGCGGTCAATTGTGGACGAGGCAGCACTGGAACTCCATGCCATACCTCATCACCACGTAGTGCAATTACGTTGAATATTGCTGTAGCTGTGGCCAGTTGTGATCGAGAGAGCCCTGGAACTCCATGCCATAACTCACCATCTAGGTATTACTCACCACCTAATGAGAGCTCTATTATTGATTATGCAGATAGAGTAACAACTACAAGCAAAGGTCTAGAGATGGATCTTGAAAAAGGCTTGAAAAGTTTTTTAAGAGAGTACAAGATGCGTGAAGATATTTTAGATCAGCAGGCATCACTTCAACGAGCAAGACTTGAAGCTTCTCTTGCTGATGGCATCTCTTGGGGTATGGGAGAGGATGCCATTATAGAAGAAGCTGAGGATGATGGTGAGGAAGTAACTTGGCAAACATACAAAGGACAGCTTTCGGAAAAGCAGATAAAAACCCGTGATAAAATAACTAAAAGAATGGAAAAGATTGCTCATATGAAGAAAGAGATAGATGCTATTCGTGCTAAAGACGTCTCTCAAGGTGGATTGACTCAAGGGCAACAAACTCAGATCGCGCGAAATGGACAAAGAACAGAACAGATGAATGACATTCTTCCAAGCTTGGAAGAACAGGGAGTGCGTCAACTGTACCCAAAAGGCCCAAATATTGATTTTAAGAAGGAACTAAGGTCCCTTAACAGAGAATTGCAGCAGCACATTTTGGAACTTGCTGATATTCTTGCTAGGGGAACACTTGTTCACATTCTAGAACTTCAGATAAAACGACGTAAACAAGCTGTGGAGGATGTAAAGAGGAGGAGAGAAGAAGCGCAGGCACTTCTGAAGGAGTCCCTTGAATCGTTGGAGGACACTGAGACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

857

Amino Acids

95.1

Weight (kDa)

5.54

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 150 - 209 1.5e-06 Leucine rich repeat
LRR_8 PF13855 273 - 331 5.2e-07 Leucine rich repeat
Med7 PF05983 760 - 812 1.5e-08 MED7 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2226
Acc36I ACCTGC 1 cut(s) 327
Acc65I GGTACC 1 cut(s) 1663
AccB1I GGYRCC 1 cut(s) 1663
AccB7I CCANNNNNTGG 1 cut(s) 651
AccII CGCG 3 cut(s) 126, 2267, 2269
AccIII TCCGGA 1 cut(s) 946
AciI CCGC 2 cut(s) 124, 1703
AclWI GGATC 4 cut(s) 454, 862, 1570, 1932
AcoI YGGCCR 2 cut(s) 687, 1791
AcsI RAATTY 7 cut(s) 197, 479, 791, 1087, 1140, 1428, 1641
AcuI CTGAAG 5 cut(s) 875, 1022, 1073, 2450, 2555
AcyI GRCGYC 1 cut(s) 2223
AdeI CACNNNGTG 1 cut(s) 1760
AfaI GTAC 6 cut(s) 219, 1012, 1591, 1665, 1961, 2342
AfiI CCNNNNNNNGG 6 cut(s) 443, 651, 938, 1057, 1235, 1285
AflIII ACRYGT 1 cut(s) 347
AjnI CCWGG 5 cut(s) 883, 1144, 1234, 1669, 1813
AleI CACNNNNGTG 1 cut(s) 17
AloI GAACNNNNNNTCC 2 cut(s) 2433, 2465
Alw21I GWGCWC 2 cut(s) 337, 1871
Alw26I GTCTC 5 cut(s) 683, 726, 808, 2230, 2561
AlwI GGATC 4 cut(s) 454, 862, 1570, 1932
Ama87I CYCGRG 2 cut(s) 336, 1181
Aor13HI TCCGGA 1 cut(s) 946
AoxI GGCC 6 cut(s) 82, 606, 687, 940, 1791, 2350
ApeKI GCWGC 5 cut(s) 308, 742, 1722, 2401, 2404
ApoI RAATTY 7 cut(s) 197, 479, 791, 1087, 1140, 1428, 1641
ArsI GACNNNNNNTTYG 2 cut(s) 1132, 1164
AseI ATTAAT 1 cut(s) 639
Asp700I GAANNNNTTC 3 cut(s) 239, 961, 1079
Asp718I GGTACC 1 cut(s) 1663
AspLEI GCGC 4 cut(s) 90, 128, 2269, 2524
AspS9I GGNCC 4 cut(s) 632, 1123, 2351, 2382
AsuHPI GGTGA 7 cut(s) 1369, 1382, 1637, 1743, 1827, 1845, 2102
AvaI CYCGRG 2 cut(s) 336, 1181
AvaII GGWCC 3 cut(s) 632, 1123, 2382
BalI TGGCCA 2 cut(s) 689, 1793
BanI GGYRCC 1 cut(s) 1663
BanII GRGCYC 2 cut(s) 1814, 1871
BarI GAAGNNNNNNTAC 4 cut(s) 843, 875, 1215, 1247
Bbv12I GWGCWC 2 cut(s) 337, 1871
BbvCI CCTCAGC 1 cut(s) 2079
BbvI GCAGC 5 cut(s) 295, 729, 1734, 2413, 2416
BccI CCATC 6 cut(s) 1257, 1625, 1846, 1915, 2027, 2081
BceAI ACGGC 2 cut(s) 2, 296
BciT130I CCWGG 5 cut(s) 885, 1146, 1236, 1671, 1815
BcoDI GTCTC 5 cut(s) 683, 726, 808, 2230, 2561
BfaI CTAG 9 cut(s) 461, 818, 1220, 1350, 1842, 1916, 2436, 2459, 2572
BfmI CTRYAG 2 cut(s) 743, 1782
BfoI RGCGCY 1 cut(s) 91
BfuAI ACCTGC 1 cut(s) 327
BglII AGATCT 2 cut(s) 535, 754
BisI GCNGC 5 cut(s) 309, 743, 1723, 2402, 2405
BlsI GCNGC 5 cut(s) 310, 744, 1724, 2403, 2406
BmcAI AGTACT 1 cut(s) 219
Bme1390I CCNGG 5 cut(s) 885, 1146, 1236, 1671, 1815
Bme18I GGWCC 3 cut(s) 632, 1123, 2382
BmeT110I CYCGRG 2 cut(s) 336, 1181
BmgT120I GGNCC 4 cut(s) 632, 1123, 2351, 2382
BmiI GGNNCC 4 cut(s) 421, 1495, 1665, 2384
BmrFI CCNGG 5 cut(s) 885, 1146, 1236, 1671, 1815
BmsI GCATC 6 cut(s) 282, 1956, 2003, 2046, 2050, 2194
BpmI CTGGAG 1 cut(s) 208
Bpu10I CCTNAGC 1 cut(s) 2079
BpuEI CTTGAG 3 cut(s) 940, 2214, 2229
BsaAI YACGTR 1 cut(s) 1757
BsaHI GRCGYC 1 cut(s) 2223
BsaI GGTCTC 1 cut(s) 2561
BsaJI CCNNGG 3 cut(s) 884, 1386, 1813
BsaWI WCCGGW 2 cut(s) 427, 946
BsaXI ACNNNNNCTCC 2 cut(s) 1717, 1747
Bsc4I CCNNNNNNNGG 6 cut(s) 443, 651, 938, 1057, 1235, 1285
Bse118I RCCGGY 1 cut(s) 84
Bse1I ACTGG 7 cut(s) 42, 191, 393, 582, 1564, 1732, 1794
Bse3DI GCAATG 1 cut(s) 1620
BseAI TCCGGA 1 cut(s) 946
BseBI CCWGG 5 cut(s) 885, 1146, 1236, 1671, 1815
BseDI CCNNGG 3 cut(s) 884, 1386, 1813
BseGI GGATG 3 cut(s) 2065, 2089, 2503
BseLI CCNNNNNNNGG 6 cut(s) 443, 651, 938, 1057, 1235, 1285
BseMI GCAATG 1 cut(s) 1620
BseMII CTCAG 6 cut(s) 74, 1344, 1529, 2070, 2273, 2556
BseNI ACTGG 7 cut(s) 42, 191, 393, 582, 1564, 1732, 1794
BseRI GAGGAG 4 cut(s) 124, 1558, 2521, 2524
BseXI GCAGC 5 cut(s) 295, 729, 1734, 2413, 2416
Bsh1236I CGCG 3 cut(s) 126, 2267, 2269
BshFI GGCC 6 cut(s) 84, 608, 689, 942, 1793, 2352
BshNI GGYRCC 1 cut(s) 1663
BsiHKAI GWGCWC 2 cut(s) 337, 1871
BsiHKCI CYCGRG 2 cut(s) 336, 1181
BsiSI CCGG 5 cut(s) 85, 296, 428, 497, 947
BslFI GGGAC 3 cut(s) 1302, 2368, 2527
BslI CCNNNNNNNGG 6 cut(s) 443, 651, 938, 1057, 1235, 1285
BsmAI GTCTC 5 cut(s) 683, 726, 808, 2230, 2561
BsmBI CGTCTC 1 cut(s) 2230
BsmFI GGGAC 3 cut(s) 1302, 2368, 2527
BsnI GGCC 6 cut(s) 84, 608, 689, 942, 1793, 2352
Bso31I GGTCTC 1 cut(s) 2561
BsoBI CYCGRG 2 cut(s) 336, 1181
Bsp1286I GDGCHC 3 cut(s) 337, 1814, 1871
Bsp13I TCCGGA 1 cut(s) 946
BspACI CCGC 2 cut(s) 124, 1703
BspANI GGCC 6 cut(s) 84, 608, 689, 942, 1793, 2352
BspCNI CTCAG 6 cut(s) 73, 1343, 1528, 2071, 2272, 2557
BspEI TCCGGA 1 cut(s) 946
BspFNI CGCG 3 cut(s) 126, 2267, 2269
BspLI GGNNCC 4 cut(s) 421, 1495, 1665, 2384
BspMAI CTGCAG 1 cut(s) 747
BspMI ACCTGC 1 cut(s) 327
BspPI GGATC 4 cut(s) 454, 862, 1570, 1932
BspT107I GGYRCC 1 cut(s) 1663
BspTNI GGTCTC 1 cut(s) 2561
BsrDI GCAATG 1 cut(s) 1620
BsrFI RCCGGY 1 cut(s) 84
BsrI ACTGG 7 cut(s) 42, 191, 393, 582, 1564, 1732, 1794
BssAI RCCGGY 1 cut(s) 84
BssECI CCNNGG 3 cut(s) 884, 1386, 1813
BssNI GRCGYC 1 cut(s) 2223
Bst2UI CCWGG 5 cut(s) 885, 1146, 1236, 1671, 1815
Bst4CI ACNGT 3 cut(s) 332, 677, 2340
Bst6I CTCTTC 2 cut(s) 245, 811
BstACI GRCGYC 1 cut(s) 2223
BstAPI GCANNNNNTGC 1 cut(s) 221
BstBAI YACGTR 1 cut(s) 1757
BstC8I GCNNGC 4 cut(s) 86, 1611, 1992, 2526
BstDEI CTNAG 8 cut(s) 60, 1307, 1330, 1515, 2079, 2259, 2378, 2565
BstDSI CCRYGG 1 cut(s) 1386
BstEII GGTNACC 1 cut(s) 1634
BstF5I GGATG 3 cut(s) 2065, 2089, 2503
BstFNI CGCG 3 cut(s) 126, 2267, 2269
BstH2I RGCGCY 1 cut(s) 91
BstHHI GCGC 4 cut(s) 90, 128, 2269, 2524
BstMAI GTCTC 5 cut(s) 683, 726, 808, 2230, 2561
BstMWI GCNNNNNNNGC 7 cut(s) 23, 38, 96, 221, 1700, 2027, 2213
BstNI CCWGG 5 cut(s) 885, 1146, 1236, 1671, 1815
BstNSI RCATGY 2 cut(s) 308, 351
BstPI GGTNACC 1 cut(s) 1634
BstSCI CCNGG 5 cut(s) 883, 1144, 1234, 1669, 1813
BstSFI CTRYAG 2 cut(s) 743, 1782
BstUI CGCG 3 cut(s) 126, 2267, 2269
BstV1I GCAGC 5 cut(s) 295, 729, 1734, 2413, 2416
BstX2I RGATCY 5 cut(s) 446, 535, 754, 1562, 1924
BstYI RGATCY 5 cut(s) 446, 535, 754, 1562, 1924
BsuRI GGCC 6 cut(s) 84, 608, 689, 942, 1793, 2352
BtgI CCRYGG 1 cut(s) 1386
BtsCI GGATG 3 cut(s) 2065, 2089, 2503
BtsI GCAGTG 1 cut(s) 1453
BtsIMutI CAGTG 6 cut(s) 184, 386, 575, 1453, 1725, 2562
BveI ACCTGC 1 cut(s) 327
Cac8I GCNNGC 4 cut(s) 86, 1611, 1992, 2526
CfoI GCGC 4 cut(s) 90, 128, 2269, 2524
Cfr10I RCCGGY 1 cut(s) 84
Cfr13I GGNCC 4 cut(s) 632, 1123, 2351, 2382
CseI GACGC 1 cut(s) 2321
CsiI ACCWGGT 2 cut(s) 1234, 1669
Csp6I GTAC 6 cut(s) 218, 1011, 1590, 1664, 1960, 2341
CspCI CAANNNNNGTGG 2 cut(s) 904, 939
CviAII CATG 5 cut(s) 305, 348, 1605, 1737, 1824
CviQI GTAC 6 cut(s) 218, 1011, 1590, 1664, 1960, 2341
DdeI CTNAG 8 cut(s) 60, 1307, 1330, 1515, 2079, 2259, 2378, 2565
DraIII CACNNNGTG 1 cut(s) 1760
EaeI YGGCCR 2 cut(s) 687, 1791
Eam1104I CTCTTC 2 cut(s) 245, 811
EarI CTCTTC 2 cut(s) 245, 811
Ecl136II GAGCTC 1 cut(s) 1869
Eco24I GRGCYC 2 cut(s) 1814, 1871
Eco31I GGTCTC 1 cut(s) 2561
Eco47I GGWCC 3 cut(s) 632, 1123, 2382
Eco53kI GAGCTC 1 cut(s) 1869
Eco57I CTGAAG 5 cut(s) 875, 1022, 1073, 2450, 2555
Eco88I CYCGRG 2 cut(s) 336, 1181
Eco91I GGTNACC 1 cut(s) 1634
EcoICRI GAGCTC 1 cut(s) 1869
EcoO109I RGGNCCY 1 cut(s) 2382
EcoO65I GGTNACC 1 cut(s) 1634
EcoRII CCWGG 5 cut(s) 883, 1144, 1234, 1669, 1813
EcoT38I GRGCYC 2 cut(s) 1814, 1871
Esp3I CGTCTC 1 cut(s) 2230
FaeI CATG 5 cut(s) 308, 351, 1608, 1740, 1827
FalI AAGNNNNNCTT 4 cut(s) 2010, 2042, 2109, 2141
FaqI GGGAC 3 cut(s) 1302, 2368, 2527
FatI CATG 5 cut(s) 304, 347, 1604, 1736, 1823
FauNDI CATATG 1 cut(s) 2187
Fnu4HI GCNGC 5 cut(s) 309, 743, 1723, 2402, 2405
FokI GGATG 3 cut(s) 2072, 2096, 2510
FriOI GRGCYC 2 cut(s) 1814, 1871
Fsp4HI GCNGC 5 cut(s) 309, 743, 1723, 2402, 2405
FspBI CTAG 9 cut(s) 461, 818, 1220, 1350, 1842, 1916, 2436, 2459, 2572
GlaI GCGC 4 cut(s) 89, 127, 2268, 2523
GluI GCNGC 5 cut(s) 309, 743, 1723, 2402, 2405
GsuI CTGGAG 1 cut(s) 208
HaeII RGCGCY 1 cut(s) 91
HaeIII GGCC 6 cut(s) 84, 608, 689, 942, 1793, 2352
HapII CCGG 5 cut(s) 85, 296, 428, 497, 947
HgaI GACGC 1 cut(s) 2321
HhaI GCGC 4 cut(s) 90, 128, 2269, 2524
Hin1I GRCGYC 1 cut(s) 2223
Hin1II CATG 5 cut(s) 308, 351, 1608, 1740, 1827
Hin6I GCGC 4 cut(s) 88, 126, 2267, 2522
HinP1I GCGC 4 cut(s) 88, 126, 2267, 2522
HincII GTYRAC 2 cut(s) 71, 2336
HindII GTYRAC 2 cut(s) 71, 2336
HindIII AAGCTT 3 cut(s) 668, 2019, 2311
HpaII CCGG 5 cut(s) 85, 296, 428, 497, 947
HphI GGTGA 7 cut(s) 1369, 1382, 1637, 1743, 1827, 1845, 2102
Hpy166II GTNNAC 6 cut(s) 71, 316, 1715, 2336, 2452, 2483
Hpy8I GTNNAC 6 cut(s) 71, 316, 1715, 2336, 2452, 2483
Hpy99I CGWCG 1 cut(s) 2481
HpyAV CCTTC 7 cut(s) 845, 953, 991, 1046, 1580, 2365, 2530
HpyCH4III ACNGT 3 cut(s) 332, 677, 2340
HpyCH4IV ACGT 5 cut(s) 73, 1756, 1769, 2223, 2479
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 38, 96, 221, 1700, 2027, 2213
HpyF3I CTNAG 8 cut(s) 60, 1307, 1330, 1515, 2079, 2259, 2378, 2565
HpySE526I ACGT 5 cut(s) 73, 1756, 1769, 2223, 2479
Hsp92I GRCGYC 1 cut(s) 2223
Hsp92II CATG 5 cut(s) 308, 351, 1608, 1740, 1827
HspAI GCGC 4 cut(s) 88, 126, 2267, 2522
Kpn2I TCCGGA 1 cut(s) 946
KpnI GGTACC 1 cut(s) 1667
KroI GCCGGC 1 cut(s) 84
KroNI GCCGGC 1 cut(s) 86
LmnI GCTCC 4 cut(s) 189, 560, 1171, 1231
Lsp1109I GCAGC 5 cut(s) 295, 729, 1734, 2413, 2416
LweI GCATC 6 cut(s) 282, 1956, 2003, 2046, 2050, 2194
MabI ACCWGGT 2 cut(s) 1234, 1669
MaeI CTAG 9 cut(s) 461, 818, 1220, 1350, 1842, 1916, 2436, 2459, 2572
MaeII ACGT 5 cut(s) 73, 1756, 1769, 2223, 2479
MaeIII GTNAC 7 cut(s) 573, 1202, 1370, 1412, 1634, 1894, 2098
MfeI CAATTG 5 cut(s) 593, 782, 1159, 1359, 1708
MflI RGATCY 5 cut(s) 446, 535, 754, 1562, 1924
MhlI GDGCHC 3 cut(s) 337, 1814, 1871
MlsI TGGCCA 2 cut(s) 689, 1793
MluNI TGGCCA 2 cut(s) 689, 1793
MlyI GAGTC 6 cut(s) 494, 498, 959, 1507, 2236, 2549
MmeI TCCRAC 1 cut(s) 2535
Mox20I TGGCCA 2 cut(s) 689, 1793
MroI TCCGGA 1 cut(s) 946
MroNI GCCGGC 1 cut(s) 84
MroXI GAANNNNTTC 3 cut(s) 239, 961, 1079
MscI TGGCCA 2 cut(s) 689, 1793
MslI CAYNNNNRTG 1 cut(s) 17
Msp20I TGGCCA 2 cut(s) 689, 1793
MspI CCGG 5 cut(s) 85, 296, 428, 497, 947
MspR9I CCNGG 5 cut(s) 885, 1146, 1236, 1671, 1815
MunI CAATTG 5 cut(s) 593, 782, 1159, 1359, 1708
MvaI CCWGG 5 cut(s) 885, 1146, 1236, 1671, 1815
MvnI CGCG 3 cut(s) 126, 2267, 2269
MwoI GCNNNNNNNGC 7 cut(s) 23, 38, 96, 221, 1700, 2027, 2213
NaeI GCCGGC 1 cut(s) 86
NdeI CATATG 1 cut(s) 2187
NgoMIV GCCGGC 1 cut(s) 84
NlaIII CATG 5 cut(s) 308, 351, 1608, 1740, 1827
NlaIV GGNNCC 4 cut(s) 421, 1495, 1665, 2384
NmuCI GTSAC 2 cut(s) 573, 1370
NspI RCATGY 2 cut(s) 308, 351
OliI CACNNNNGTG 1 cut(s) 17
PaeR7I CTCGAG 2 cut(s) 336, 1181
PciI ACATGT 1 cut(s) 347
PdiI GCCGGC 1 cut(s) 86
PdmI GAANNNNTTC 3 cut(s) 239, 961, 1079
PfeI GAWTC 8 cut(s) 206, 272, 395, 455, 1186, 1258, 1282, 2549
PflMI CCANNNNNTGG 1 cut(s) 651
PkrI GCNGC 5 cut(s) 310, 744, 1724, 2403, 2406
PleI GAGTC 6 cut(s) 494, 497, 958, 1507, 2236, 2548
PpsI GAGTC 6 cut(s) 494, 497, 958, 1507, 2236, 2548
Ppu21I YACGTR 1 cut(s) 1757
PpuMI RGGWCCY 1 cut(s) 2382
PscI ACATGT 1 cut(s) 347
PshBI ATTAAT 1 cut(s) 639
Psp124BI GAGCTC 1 cut(s) 1871
Psp5II RGGWCCY 1 cut(s) 2382
Psp6I CCWGG 5 cut(s) 883, 1144, 1234, 1669, 1813
PspEI GGTNACC 1 cut(s) 1634
PspGI CCWGG 5 cut(s) 883, 1144, 1234, 1669, 1813
PspN4I GGNNCC 4 cut(s) 421, 1495, 1665, 2384
PspPI GGNCC 4 cut(s) 632, 1123, 2351, 2382
PspPPI RGGWCCY 1 cut(s) 2382
PspXI VCTCGAGB 1 cut(s) 336
PstI CTGCAG 1 cut(s) 747
PsuI RGATCY 5 cut(s) 446, 535, 754, 1562, 1924
RsaI GTAC 6 cut(s) 219, 1012, 1591, 1665, 1961, 2342
RsaNI GTAC 6 cut(s) 218, 1011, 1590, 1664, 1960, 2341
RseI CAYNNNNRTG 1 cut(s) 17
SacI GAGCTC 1 cut(s) 1871
SatI GCNGC 5 cut(s) 309, 743, 1723, 2402, 2405
Sau96I GGNCC 4 cut(s) 632, 1123, 2351, 2382
ScaI AGTACT 1 cut(s) 219
SchI GAGTC 6 cut(s) 494, 498, 959, 1507, 2236, 2549
ScrFI CCNGG 5 cut(s) 885, 1146, 1236, 1671, 1815
SduI GDGCHC 3 cut(s) 337, 1814, 1871
SexAI ACCWGGT 2 cut(s) 1234, 1669
SfaNI GCATC 6 cut(s) 282, 1956, 2003, 2046, 2050, 2194
SfcI CTRYAG 2 cut(s) 743, 1782
Sfr274I CTCGAG 2 cut(s) 336, 1181
SinI GGWCC 3 cut(s) 632, 1123, 2382
SlaI CTCGAG 2 cut(s) 336, 1181
SmiMI CAYNNNNRTG 1 cut(s) 17
SmlI CTYRAG 5 cut(s) 336, 919, 1181, 2229, 2244
SmoI CTYRAG 5 cut(s) 336, 919, 1181, 2229, 2244
SsiI CCGC 2 cut(s) 124, 1703
SspI AATATT 2 cut(s) 1777, 2359
SspMI CTAG 9 cut(s) 461, 818, 1220, 1350, 1842, 1916, 2436, 2459, 2572
SstI GAGCTC 1 cut(s) 1871
StyD4I CCNGG 5 cut(s) 883, 1144, 1234, 1669, 1813
TaaI ACNGT 3 cut(s) 332, 677, 2340
TaiI ACGT 5 cut(s) 76, 1759, 1772, 2226, 2482
TaqI TCGA 7 cut(s) 337, 344, 453, 681, 953, 1182, 1804
TatI WGTACW 2 cut(s) 217, 1959
TfiI GAWTC 8 cut(s) 206, 272, 395, 455, 1186, 1258, 1282, 2549
TscAI CASTG 6 cut(s) 191, 393, 582, 1453, 1732, 2569
TseFI GTSAC 2 cut(s) 573, 1370
TseI GCWGC 5 cut(s) 308, 742, 1722, 2401, 2404
Tsp45I GTSAC 2 cut(s) 573, 1370
TspDTI ATGAA 6 cut(s) 17, 387, 1166, 1641, 2204, 2309
TspRI CASTG 6 cut(s) 191, 393, 582, 1453, 1732, 2569
Van91I CCANNNNNTGG 1 cut(s) 651
VpaK11BI GGWCC 3 cut(s) 632, 1123, 2382
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 7 cut(s) 197, 479, 791, 1087, 1140, 1428, 1641
XbaI TCTAGA 3 cut(s) 1219, 1915, 2458
XceI RCATGY 2 cut(s) 308, 351
XhoI CTCGAG 2 cut(s) 336, 1181
XmnI GAANNNNTTC 3 cut(s) 239, 961, 1079
XspI CTAG 9 cut(s) 461, 818, 1220, 1350, 1842, 1916, 2436, 2459, 2572
ZraI GACGTC 1 cut(s) 2224
ZrmI AGTACT 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.