Rorug03G0165900

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000047
Physical Location & Seq
Reverse (-)
13828094 .. 13830462
2369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0165900.1

Sequence Viewer

Length: 1800 bp
ATGATATCAAACCAACAAGTCGCTCAACAAATCGCTAAAACCCTAGTGGAATCAGGCCTTCAACACCTCAAAGTTCTGCTCTCCAATCTCAACCCCAACATAACCCACCTCGTCCTCTCAGACCCAATCCTCCCACCTCAATCTTGCTTGACCTTATTCAACTTCCTCAGAAGAAACCCGTCTCTCAAATCCCACAGACCCAATCTCCAAGCCCATGTAACCCTCTTTTGCAGGCTCCACCAAGCTAAAAGATTCGCCCAAATGAAGAATGTGGTGAATGCTATAGTGAACAACGATCGTCTCCGATGCCCGGTTTCCGGAATCGTTTCTTTGATCGAGAACGGTTCTTATGCGCCTGACTCGGTTGAGAAACTTTGTGATATGCTATTCAGGGTTTATGCGGACAACCAAATGTTTGAAGAAGCCATTGGGGTTTTTGATTATGTGTTCAAGAATGGGCTTGAGATTGAAGAAAGGTCCTGCTTTGTGCTTTTGCTCGCATTGAAGAAGTGTTATCAAGTGGATGAGTGTTTAAGTTTCTTTGATCTAATGCTCGAAAAGGGTGTTCGGATCACGGTTTATTCCATGACATTAGTGATCAATGAGCTTTGTAAGAGAGGAGAGGTGGAAAAGGCTAAGACATTGATGGGTGAAATGGGTGGGAGAGGGATTGAGGCTAATGTTTATACGTATAACACGATTGCGAAAGCCTACATTGAAATGAAGGATTTCGGTGGGGTTAATGAGGTCTTGAGCTTGATGAAGATGAATAATGTGGAGTATAATGTGGCAACATACAACCTTTTGATTGATTGGTATGGGAGTTGTGAGAAGATTGGAGATGCAGAGAAGCTGTTTGATGAAATGCGTGAGAGAGGGATAGAGCCGGATGTGTATGTTTACACTTCCATGATTAACTGGAATTGTAGAGCGGGGAAAATGAAAAGGGCATTGTTTCTGTTCGATGAAATGACTGAAAGAAGGCTTGTTCCGAATGATCACACTTACGGCGCATTGATTAATGGTGCTTGTAAGGCAGGGCAGATGGAGATGGCAGACATTTTGGTGAAAGAGATGCAAGGTAAAGGAATTGCCATAAACCGAGTTGTGTATAATACACTGATTGATGGGTACTGCAGAAAAGGGATGATAGATGAAGCTCAGAGGTTCCAGGATGTGATGGAAAAGAAAGGGTTGAAGGCTGATGTCTATACTTACTGCACTATAGCTAGGGGATTGTTTAAATTGAATAGGAATGAGGACGCAAAGAGGTCCTTGTTAACTATGGCAGAAAGAGGTGTGGCTCCAAACTCAGTGTGCTTCACTACTCTGATAGACATATATTGCAAGGAAGGAGACTTTGTCGAAGCAAAGCGGGTATTTCAGGAGATGGAAAGGAAAGGAGAGAGGCCTAATAACGTAACATACAATGCTCTAATTGATGGGCATACCAAGAAAGGTAAACTGAAGGAAGCGCATAAGATGAAAAAGGAGATGGAAGACAAGGGTTTGATGGCAGATTCATATACATATTCATCGCTCATACACGGTGAATGTATCGCTGGCAACGTGGATGCGGCACTGACATTGTTTCATGAAATGTCCAGGAGGGGTTTAACTCGAAACGTTGTCACATACACAGTAATTATTTCAGGTTTGTCTAAGGTGGGGAGAAAAGAAGAAGCTTTCAAATTGTACGATGACATGAAAAAAGCAGGCATCATACCTGATGACAGGGTATATAATTCACTTGTACAAGGCCTTTATACAGACACGTCTAGCTCTATGGCAGATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

599

Amino Acids

67.97

Weight (kDa)

7.45

Isoelectric Point (pI)

31.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 193 - 238 1.9e-10 PPR repeat family
PPR_3 PF13812 215 - 274 1.2e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 258 - 290 2e-06 PPR repeat
PPR_2 PF13041 262 - 310 1e-15 PPR repeat family
PPR PF01535 265 - 294 2.9e-07 PPR repeat
PPR_long PF17177 276 - 401 1.6e-08 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 284 - 341 3.2e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 292 - 325 3.3e-09 PPR repeat
PPR_2 PF13041 297 - 345 3.3e-14 PPR repeat family
PPR PF01535 300 - 328 1.3e-06 PPR repeat
PPR PF01535 335 - 364 2.3e-06 PPR repeat
PPR_3 PF13812 355 - 409 3.2e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 362 - 395 3.5e-11 PPR repeat
PPR_2 PF13041 368 - 415 1.9e-14 PPR repeat family
PPR PF01535 369 - 399 9.8e-08 PPR repeat
PPR_long PF17177 420 - 519 2.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 429 - 481 8.3e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 432 - 465 1.6e-10 PPR repeat
PPR_2 PF13041 436 - 482 2e-16 PPR repeat family
PPR PF01535 439 - 468 1.1e-08 PPR repeat
PPR_1 PF12854 468 - 500 5.4e-09 PPR repeat
TPR_24 PF23276 468 - 568 1e-05 Fungal tetratrico peptide repeats
PPR_2 PF13041 471 - 519 3.1e-16 PPR repeat family
PPR PF01535 474 - 504 1.1e-07 PPR repeat
PPR_1 PF12854 502 - 535 4.4e-09 PPR repeat
PPR PF01535 509 - 539 9.8e-07 PPR repeat
PPR_2 PF13041 513 - 555 5.4e-11 PPR repeat family
PPR_3 PF13812 530 - 585 1.7e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 537 - 570 3.6e-08 PPR repeat
PPR_2 PF13041 541 - 588 1.9e-15 PPR repeat family
PPR PF01535 544 - 574 7.5e-08 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 932
AccIII TCCGGA 1 cut(s) 317
AciI CCGC 4 cut(s) 401, 932, 1375, 1577
AclI AACGTT 1 cut(s) 1626
AclWI GGATC 1 cut(s) 578
AcuI CTGAAG 1 cut(s) 1487
AfaI GTAC 3 cut(s) 1133, 1697, 1755
AfiI CCNNNNNNNGG 2 cut(s) 310, 317
AflIII ACRYGT 1 cut(s) 1773
AjiI CACGTC 1 cut(s) 1776
AjnI CCWGG 2 cut(s) 1170, 1604
AjuI GAANNNNNNNTTGG 2 cut(s) 411, 443
AluBI AGCT 8 cut(s) 245, 607, 756, 853, 1160, 1229, 1685, 1782
AluI AGCT 8 cut(s) 245, 607, 756, 853, 1160, 1229, 1685, 1782
Alw26I GTCTC 3 cut(s) 186, 305, 1350
AlwI GGATC 1 cut(s) 578
Aor13HI TCCGGA 1 cut(s) 317
AoxI GGCC 3 cut(s) 55, 1409, 1759
AseI ATTAAT 1 cut(s) 1020
Asp700I GAANNNNTTC 2 cut(s) 325, 728
AspLEI GCGC 3 cut(s) 355, 1013, 1477
AspS9I GGNCC 2 cut(s) 477, 1272
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 4 cut(s) 286, 662, 1078, 1562
AvaII GGWCC 2 cut(s) 477, 1272
BbsI GAAGAC 1 cut(s) 1506
BccI CCATC 9 cut(s) 640, 1039, 1045, 1121, 1174, 1384, 1436, 1489, 1507
BceAI ACGGC 1 cut(s) 1024
BciT130I CCWGG 2 cut(s) 1172, 1606
BclI TGATCA 2 cut(s) 597, 997
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 3 cut(s) 186, 305, 1350
BfaI CTAG 3 cut(s) 44, 1230, 1779
BfmI CTRYAG 3 cut(s) 282, 1135, 1224
BisI GCNGC 1 cut(s) 1578
BlsI GCNGC 1 cut(s) 1579
Bme1390I CCNGG 3 cut(s) 311, 1172, 1606
Bme18I GGWCC 2 cut(s) 477, 1272
BmgBI CACGTC 1 cut(s) 1776
BmgT120I GGNCC 2 cut(s) 477, 1272
BmiI GGNNCC 3 cut(s) 236, 1169, 1305
BmrFI CCNGG 3 cut(s) 311, 1172, 1606
BmsI GCATC 5 cut(s) 296, 832, 1065, 1564, 1728
BpiI GAAGAC 1 cut(s) 1506
BpuEI CTTGAG 2 cut(s) 482, 772
BpuMI CCSGG 1 cut(s) 311
BsaAI YACGTR 1 cut(s) 690
BsaWI WCCGGW 1 cut(s) 317
BsaXI ACNNNNNCTCC 4 cut(s) 189, 219, 1347, 1377
Bsc4I CCNNNNNNNGG 2 cut(s) 310, 317
Bse1I ACTGG 1 cut(s) 923
BseAI TCCGGA 1 cut(s) 317
BseBI CCWGG 2 cut(s) 1172, 1606
BseGI GGATG 5 cut(s) 529, 895, 1152, 1180, 1579
BseLI CCNNNNNNNGG 2 cut(s) 310, 317
BseMII CTCAG 4 cut(s) 132, 181, 1175, 1326
BseNI ACTGG 1 cut(s) 923
BseRI GAGGAG 1 cut(s) 633
BsgI GTGCAG 1 cut(s) 1204
Bsh1285I CGRYCG 1 cut(s) 298
BshFI GGCC 3 cut(s) 57, 1411, 1761
BsiEI CGRYCG 1 cut(s) 298
BsiSI CCGG 3 cut(s) 311, 318, 887
BslI CCNNNNNNNGG 2 cut(s) 310, 317
BsmAI GTCTC 3 cut(s) 186, 305, 1350
BsmBI CGTCTC 2 cut(s) 186, 305
BsmI GAATGC 1 cut(s) 283
BsnI GGCC 3 cut(s) 57, 1411, 1761
Bsp13I TCCGGA 1 cut(s) 317
Bsp1407I TGTACA 1 cut(s) 1753
Bsp143I GATC 6 cut(s) 295, 333, 544, 570, 597, 997
BspACI CCGC 4 cut(s) 401, 932, 1375, 1577
BspANI GGCC 3 cut(s) 57, 1411, 1761
BspCNI CTCAG 4 cut(s) 131, 180, 1174, 1325
BspEI TCCGGA 1 cut(s) 317
BspHI TCATGA 1 cut(s) 1594
BspLI GGNNCC 3 cut(s) 236, 1169, 1305
BspMAI CTGCAG 1 cut(s) 1139
BspPI GGATC 1 cut(s) 578
BsrBI CCGCTC 1 cut(s) 932
BsrGI TGTACA 1 cut(s) 1753
BsrI ACTGG 1 cut(s) 923
BssMI GATC 6 cut(s) 295, 333, 544, 570, 597, 997
Bst2UI CCWGG 2 cut(s) 1172, 1606
Bst4CI ACNGT 4 cut(s) 344, 577, 1550, 1642
BstAUI TGTACA 1 cut(s) 1753
BstBAI YACGTR 1 cut(s) 690
BstC8I GCNNGC 4 cut(s) 233, 498, 1564, 1717
BstDEI CTNAG 6 cut(s) 118, 167, 636, 1161, 1312, 1662
BstF5I GGATG 5 cut(s) 529, 895, 1152, 1180, 1579
BstHHI GCGC 3 cut(s) 355, 1013, 1477
BstKTI GATC 6 cut(s) 298, 336, 547, 573, 600, 1000
BstMAI GTCTC 3 cut(s) 186, 305, 1350
BstMBI GATC 6 cut(s) 295, 333, 544, 570, 597, 997
BstMCI CGRYCG 1 cut(s) 298
BstMWI GCNNNNNNNGC 1 cut(s) 1034
BstNI CCWGG 2 cut(s) 1172, 1606
BstSCI CCNGG 3 cut(s) 309, 1170, 1604
BstSFI CTRYAG 3 cut(s) 282, 1135, 1224
BstSNI TACGTA 1 cut(s) 690
BstV2I GAAGAC 1 cut(s) 1506
BsuRI GGCC 3 cut(s) 57, 1411, 1761
BtgZI GCGATG 1 cut(s) 1521
BtrI CACGTC 1 cut(s) 1776
BtsCI GGATG 5 cut(s) 529, 895, 1152, 1180, 1579
BtsIMutI CAGTG 3 cut(s) 1118, 1320, 1580
Cac8I GCNNGC 4 cut(s) 233, 498, 1564, 1717
CciI TCATGA 1 cut(s) 1594
CfoI GCGC 3 cut(s) 355, 1013, 1477
Cfr13I GGNCC 2 cut(s) 477, 1272
CseI GACGC 1 cut(s) 1271
Csp6I GTAC 3 cut(s) 1132, 1696, 1754
CviAII CATG 5 cut(s) 215, 586, 910, 1595, 1705
CviQI GTAC 3 cut(s) 1132, 1696, 1754
DdeI CTNAG 6 cut(s) 118, 167, 636, 1161, 1312, 1662
DpnI GATC 6 cut(s) 297, 335, 546, 572, 599, 999
DpnII GATC 6 cut(s) 295, 333, 544, 570, 597, 997
DraI TTTAAA 1 cut(s) 1243
Eco105I TACGTA 1 cut(s) 690
Eco147I AGGCCT 3 cut(s) 57, 1411, 1761
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 2 cut(s) 477, 1272
Eco57I CTGAAG 1 cut(s) 1487
EcoO109I RGGNCCY 2 cut(s) 477, 1272
EcoRII CCWGG 2 cut(s) 1170, 1604
EcoRV GATATC 1 cut(s) 6
Esp3I CGTCTC 2 cut(s) 186, 305
FaeI CATG 5 cut(s) 218, 589, 913, 1598, 1708
FalI AAGNNNNNCTT 2 cut(s) 1259, 1291
FatI CATG 5 cut(s) 214, 585, 909, 1594, 1704
FauI CCCGC 2 cut(s) 925, 1368
FbaI TGATCA 2 cut(s) 597, 997
Fnu4HI GCNGC 1 cut(s) 1578
FokI GGATG 5 cut(s) 536, 902, 1159, 1187, 1586
Fsp4HI GCNGC 1 cut(s) 1578
FspBI CTAG 3 cut(s) 44, 1230, 1779
GlaI GCGC 3 cut(s) 354, 1012, 1476
GluI GCNGC 1 cut(s) 1578
HaeIII GGCC 3 cut(s) 57, 1411, 1761
HapII CCGG 3 cut(s) 311, 318, 887
HgaI GACGC 1 cut(s) 1271
HhaI GCGC 3 cut(s) 355, 1013, 1477
Hin1II CATG 5 cut(s) 218, 589, 913, 1598, 1708
Hin6I GCGC 3 cut(s) 353, 1011, 1475
HinP1I GCGC 3 cut(s) 353, 1011, 1475
HincII GTYRAC 1 cut(s) 1281
HindII GTYRAC 1 cut(s) 1281
HindIII AAGCTT 1 cut(s) 1683
HinfI GANTC 5 cut(s) 50, 252, 321, 359, 1520
HpaI GTTAAC 1 cut(s) 1281
HpaII CCGG 3 cut(s) 311, 318, 887
HphI GGTGA 4 cut(s) 286, 662, 1078, 1562
Hpy166II GTNNAC 4 cut(s) 289, 901, 1281, 1463
Hpy188I TCNGA 7 cut(s) 121, 170, 305, 570, 993, 1164, 1332
Hpy188III TCNNGA 6 cut(s) 318, 337, 451, 751, 1385, 1595
Hpy8I GTNNAC 4 cut(s) 289, 901, 1281, 1463
HpyAV CCTTC 6 cut(s) 68, 718, 975, 1192, 1346, 1462
HpyCH4III ACNGT 4 cut(s) 344, 577, 1550, 1642
HpyCH4IV ACGT 5 cut(s) 689, 1419, 1569, 1626, 1775
HpyCH4V TGCA 6 cut(s) 231, 845, 1078, 1137, 1221, 1347
HpyF10VI GCNNNNNNNGC 1 cut(s) 1034
HpyF3I CTNAG 6 cut(s) 118, 167, 636, 1161, 1312, 1662
HpySE526I ACGT 5 cut(s) 689, 1419, 1569, 1626, 1775
Hsp92II CATG 5 cut(s) 218, 589, 913, 1598, 1708
HspAI GCGC 3 cut(s) 353, 1011, 1475
Kpn2I TCCGGA 1 cut(s) 317
Ksp22I TGATCA 2 cut(s) 597, 997
KspAI GTTAAC 1 cut(s) 1281
Kzo9I GATC 6 cut(s) 295, 333, 544, 570, 597, 997
LmnI GCTCC 2 cut(s) 240, 1309
LweI GCATC 5 cut(s) 296, 832, 1065, 1564, 1728
MaeI CTAG 3 cut(s) 44, 1230, 1779
MaeII ACGT 5 cut(s) 689, 1419, 1569, 1626, 1775
MaeIII GTNAC 3 cut(s) 217, 1420, 1630
MalI GATC 6 cut(s) 297, 335, 546, 572, 599, 999
MbiI CCGCTC 1 cut(s) 932
MboI GATC 6 cut(s) 295, 333, 544, 570, 597, 997
MboII GAAGA 9 cut(s) 183, 277, 431, 482, 517, 775, 844, 1511, 1691
MluCI AATT 7 cut(s) 922, 1089, 1244, 1437, 1644, 1691, 1744
MlyI GAGTC 1 cut(s) 353
MroI TCCGGA 1 cut(s) 317
MroXI GAANNNNTTC 2 cut(s) 325, 728
MseI TTAA 7 cut(s) 533, 741, 915, 1020, 1242, 1280, 1616
MslI CAYNNNNRTG 3 cut(s) 719, 908, 1064
MspI CCGG 3 cut(s) 311, 318, 887
MspR9I CCNGG 3 cut(s) 311, 1172, 1606
Mva1269I GAATGC 1 cut(s) 283
MvaI CCWGG 2 cut(s) 1172, 1606
MwoI GCNNNNNNNGC 1 cut(s) 1034
NciI CCSGG 1 cut(s) 311
NdeII GATC 6 cut(s) 295, 333, 544, 570, 597, 997
NlaIII CATG 5 cut(s) 218, 589, 913, 1598, 1708
NlaIV GGNNCC 3 cut(s) 236, 1169, 1305
NmuCI GTSAC 1 cut(s) 1630
PagI TCATGA 1 cut(s) 1594
PceI AGGCCT 3 cut(s) 57, 1411, 1761
PcsI WCGNNNNNNNCGW 2 cut(s) 695, 1566
PctI GAATGC 1 cut(s) 283
PdmI GAANNNNTTC 2 cut(s) 325, 728
PfeI GAWTC 4 cut(s) 50, 252, 321, 1520
PflFI GACNNNGTC 1 cut(s) 1361
PfoI TCCNGGA 2 cut(s) 1170, 1604
PkrI GCNGC 1 cut(s) 1579
Ple19I CGATCG 1 cut(s) 298
PleI GAGTC 1 cut(s) 353
PpsI GAGTC 1 cut(s) 353
Ppu21I YACGTR 1 cut(s) 690
PpuMI RGGWCCY 2 cut(s) 477, 1272
PshBI ATTAAT 1 cut(s) 1020
Psp1406I AACGTT 1 cut(s) 1626
Psp5II RGGWCCY 2 cut(s) 477, 1272
Psp6I CCWGG 2 cut(s) 1170, 1604
PspGI CCWGG 2 cut(s) 1170, 1604
PspN4I GGNNCC 3 cut(s) 236, 1169, 1305
PspPI GGNCC 2 cut(s) 477, 1272
PspPPI RGGWCCY 2 cut(s) 477, 1272
PstI CTGCAG 1 cut(s) 1139
PsyI GACNNNGTC 1 cut(s) 1361
PvuI CGATCG 1 cut(s) 298
RsaI GTAC 3 cut(s) 1133, 1697, 1755
RsaNI GTAC 3 cut(s) 1132, 1696, 1754
RseI CAYNNNNRTG 3 cut(s) 719, 908, 1064
SaqAI TTAA 7 cut(s) 533, 741, 915, 1020, 1242, 1280, 1616
SatI GCNGC 1 cut(s) 1578
Sau3AI GATC 6 cut(s) 295, 333, 544, 570, 597, 997
Sau96I GGNCC 2 cut(s) 477, 1272
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 3 cut(s) 311, 1172, 1606
SfaNI GCATC 5 cut(s) 296, 832, 1065, 1564, 1728
SfcI CTRYAG 3 cut(s) 282, 1135, 1224
SinI GGWCC 2 cut(s) 477, 1272
SmiMI CAYNNNNRTG 3 cut(s) 719, 908, 1064
SmlI CTYRAG 2 cut(s) 461, 751
SmoI CTYRAG 2 cut(s) 461, 751
SnaBI TACGTA 1 cut(s) 690
Sse9I AATT 7 cut(s) 922, 1089, 1244, 1437, 1644, 1691, 1744
SseBI AGGCCT 3 cut(s) 57, 1411, 1761
SsiI CCGC 4 cut(s) 401, 932, 1375, 1577
SspMI CTAG 3 cut(s) 44, 1230, 1779
StuI AGGCCT 3 cut(s) 57, 1411, 1761
StyD4I CCNGG 3 cut(s) 309, 1170, 1604
TaaI ACNGT 4 cut(s) 344, 577, 1550, 1642
TaiI ACGT 5 cut(s) 692, 1422, 1572, 1629, 1778
TaqI TCGA 5 cut(s) 336, 555, 963, 1365, 1621
TasI AATT 7 cut(s) 922, 1089, 1244, 1437, 1644, 1691, 1744
TatI WGTACW 1 cut(s) 1753
TauI GCSGC 1 cut(s) 1580
TfiI GAWTC 4 cut(s) 50, 252, 321, 1520
Tru1I TTAA 7 cut(s) 533, 741, 915, 1020, 1242, 1280, 1616
Tru9I TTAA 7 cut(s) 533, 741, 915, 1020, 1242, 1280, 1616
TscAI CASTG 3 cut(s) 1125, 1320, 1587
TseFI GTSAC 1 cut(s) 1630
Tsp45I GTSAC 1 cut(s) 1630
TspRI CASTG 3 cut(s) 1125, 1320, 1587
Tth111I GACNNNGTC 1 cut(s) 1361
VpaK11BI GGWCC 2 cut(s) 477, 1272
VspI ATTAAT 1 cut(s) 1020
XmnI GAANNNNTTC 2 cut(s) 325, 728
XspI CTAG 3 cut(s) 44, 1230, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.