RchiOBHm_Chr1g0351861

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Forward (+)
45053532 .. 45056450
2919 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57761

Sequence Viewer

Length: 2919 bp
ATGAAAACTTTGCTACATTTCTTCCTCTTCTTGATCACACTCTGGGTCAGTATCATCATCCCAGCAGTTCACAGCCAGTGCATTAAAGACCAGCAACTATCACTGCTCCAATTCAAGAAAAGCCTTGTGTTCCATGATATTTCCATATATTCACTTACCAGGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTGGGCGTCACTTGCAGCCGTAGTGGGCGTGTTGTAGGTCTTGACATAAGCAGCAAACAGATCTATGGTGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCGGACAACCGACTTGGCAGTTACTCTCAATCAATTCCATCCGCAATCGGAAATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAATGATTATTCAGGGCAAATTCCCATCGAGATTTCTCGCTTGAGGAGGTTGGTAGTTCTTGATTTTTCTAACAATGGTCCAGTCTCACAACTTGGAAGTCCAAATTTACACATGTTGGTTCACAACCTCACAGAGCTTAGACAGTTATATCTTGATGGTATCCCAATATCAGAACAGGGGAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAAGGTTTTGAGCTTGTCCTCTTGTAATCTTTCAGGCCCTCTTCTCGAGTCCCTTGCTAAGCTTCAGTCTCTATCCGTGATTAGGTTGGACTGGAACAATATCTCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCCTGAGTCTCACAAGTTGCTCATTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAGATAATGACCGACTTGATGGTTCCTTGCCAGAGTTCCCGAGGAATGGATCTCTTCAGCACCTGCATCTAAGGTGGACAAAATTTTCAGGGTTATTACCAAATTCTATTGGCAATCTCAAAATGCTGTCCACCATATATATTCGAGATTGCTATTTCACCGGACCGATGCCCAAGTCAATGACAAACCTTACACGGTTGGTTTCTTTGTCGATGTCTGGTAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAATAATGTGGGCTACATAGACCTTTCCTACAATGGTCTAACAGGTACTATTAATTCCACGCACTGGGGAAACCTTACTAAGCTATCCTCTCTCGATTTGAGTTCCAATAAGCTCGATGGGAATATCCCAGCATCTCTGTTTTCTCTTCCCCTTTTGGATTACCTACATCTTTCCAGCAATCAATTCTCTGGTCCATTCCCTGAAATTTCAAATGTGTCTTCCTACCTGCTGAATGGTCCTGATCTTAAACTTGATTTGAGAAATCAATCTAACTTATATAGTTTGGACCTCTCAGATAACCAGATAAATGGCAAGATACCCGACTGGATTTGGAGTTTAAGTAATCTCGAGTTCCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCATTCAATTAATCTCACTAATCTAGATTACCTTGACCTTCATTCCAACCAGTTTCATGGGCAAATCCCAATTCTTTCATCACCTTTCAGACTCTATTACCTAGATTTCTCCAGGAATTATTTCAGCTCTATTGGAGATGTGTTTCTCAACGCAAGCTTTTTCTCACTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATTCACATTTTCTTGAGGTTCTTGATCTGTCCAATAATTCTTTGAGTGGCACGGTTCCCCAATGCTTAACTGCAATGAGGAGGCTTGAAGTACTCAACTTAAGGAGAAACAGTCTTACAAATGTTGATGACTTCTCTCATAATTGTGGGTTAAAAACTCTTGACATCAGTGAAAATCACCTTCAAGGCCGGTTTCTAAAATCTCTTGTCAGCTGCACCCAGTTAGAGGTTTTGAACCTTGGAAACAATTTGATAACAGAACCATTTCCATGCTTTTTGAGGAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTTTATGGGCGCATTGGATGTCGCAACATTAATGGCACTTGGCCAGTACTTCAAATCATAGACTTAGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCGATGAAGACTAGCAAAAATGATGCCCCATTGAAGACCAGTCTCCTTCAATATGAGTTGTGGGGAGTTCAATATCAAGAAGATACAATCACAGTGACTAACAAAGGTTTAGCGGTGGAGCTGGTGATTGTTTTAACCATCTTCACCTCCATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCCGAGGAAATTGGAGAACTCCAATCACTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCACTAAGCAACTTGAGTCAGCTAGAGTCCTTGGACCTCTCGAAAAACAAACTGCGCGGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCATATAATCAGTTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGACAAGAACCCAGGGTTCTCACCACCAAAGCTGGAAGGAAACCATTCAAATCCTGGACATGAGATTGATTGGGATATTATCGGTCCTGAAATTGGGTTTACATGTGGGTTTGGGATTGCCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATGACATGCTTCTAAAGATATTCCCTCAGCTAGAACAAAGACTTGATCATCACAGGAGGCATGTTTATGTACATCAAAGATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

972

Amino Acids

108.42

Weight (kDa)

6.68

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 73 7.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 94 - 189 8.9e-07 Leucine-rich repeat region
LRR_8 PF13855 235 - 293 2.9e-07 Leucine rich repeat
LRR_14 PF23598 307 - 536 1.1e-11 Leucine-rich repeat region
LRR_8 PF13855 381 - 438 2.6e-06 Leucine rich repeat
LRR_8 PF13855 466 - 525 4.5e-08 Leucine rich repeat
LRR_8 PF13855 562 - 616 1.5e-06 Leucine rich repeat
LRR_8 PF13855 604 - 662 2.5e-06 Leucine rich repeat
LRR_14 PF23598 786 - 850 7.4e-06 Leucine-rich repeat region
LRR_8 PF13855 796 - 855 2.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 939
Acc36I ACCTGC 2 cut(s) 939, 1362
AccB1I GGYRCC 1 cut(s) 603
AccB7I CCANNNNNTGG 1 cut(s) 1191
AccII CGCG 1 cut(s) 2496
AciI CCGC 5 cut(s) 329, 369, 2288, 2496, 2583
AclWI GGATC 4 cut(s) 925, 1718, 2040, 2362
AcoI YGGCCR 1 cut(s) 2096
AcsI RAATTY 7 cut(s) 403, 432, 517, 950, 970, 1332, 2054
AcuI CTGAAG 2 cut(s) 683, 908
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 6 cut(s) 184, 1174, 1824, 2103, 2148, 2904
AfiI CCNNNNNNNGG 7 cut(s) 325, 717, 752, 914, 1191, 1957, 2750
AflII CTTAAG 1 cut(s) 1831
AflIII ACRYGT 2 cut(s) 525, 2759
AjnI CCWGG 6 cut(s) 158, 751, 1631, 2149, 2668, 2710
AjuI GAANNNNNNNTTGG 2 cut(s) 2402, 2434
Alw21I GWGCWC 1 cut(s) 2590
Alw26I GTCTC 5 cut(s) 296, 502, 708, 797, 2222
AlwI GGATC 4 cut(s) 925, 1718, 2040, 2362
AlwNI CAGNNNCTG 1 cut(s) 931
Ama87I CYCGRG 4 cut(s) 680, 907, 1475, 2363
AoxI GGCC 5 cut(s) 670, 1125, 1918, 2096, 2642
ApeKI GCWGC 4 cut(s) 216, 252, 1944, 2609
ApoI RAATTY 7 cut(s) 403, 432, 517, 950, 970, 1332, 2054
AseI ATTAAT 3 cut(s) 1179, 1530, 2085
Asp700I GAANNNNTTC 3 cut(s) 1640, 1995, 2701
AspLEI GCGC 3 cut(s) 745, 2067, 2496
AsuHPI GGTGA 7 cut(s) 1018, 1593, 1901, 2153, 2311, 2311, 2670
AvaI CYCGRG 4 cut(s) 680, 907, 1475, 2363
AvaII GGWCC 7 cut(s) 491, 1031, 1319, 1364, 1414, 2473, 2741
BalI TGGCCA 1 cut(s) 2098
BanI GGYRCC 1 cut(s) 603
BbsI GAAGAC 3 cut(s) 1338, 2189, 2216
Bbv12I GWGCWC 1 cut(s) 2590
BbvCI CCTCAGC 1 cut(s) 2859
BbvI GCAGC 4 cut(s) 228, 264, 1931, 2621
BceAI ACGGC 1 cut(s) 204
BcgI CGANNNNNNTGC 2 cut(s) 671, 705
BciT130I CCWGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
BciVI GTATCC 2 cut(s) 584, 2568
BclI TGATCA 2 cut(s) 33, 2878
BcoDI GTCTC 5 cut(s) 296, 502, 708, 797, 2222
BfaI CTAG 8 cut(s) 1505, 1514, 1544, 1622, 2187, 2462, 2864, 2917
BfrI CTTAAG 1 cut(s) 1831
BfuAI ACCTGC 2 cut(s) 939, 1362
BfuI GTATCC 2 cut(s) 584, 2568
BglII AGATCT 2 cut(s) 261, 831
BisI GCNGC 4 cut(s) 217, 253, 1945, 2610
BlpI GCTNAGC 1 cut(s) 693
BlsI GCNGC 4 cut(s) 218, 254, 1946, 2611
BmcAI AGTACT 3 cut(s) 184, 1824, 2103
Bme1390I CCNGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
Bme18I GGWCC 7 cut(s) 491, 1031, 1319, 1364, 1414, 2473, 2741
BmeT110I CYCGRG 4 cut(s) 680, 907, 1475, 2363
BmiI GGNNCC 5 cut(s) 605, 892, 1126, 1788, 2643
BmrFI CCNGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
BmrI ACTGGG 2 cut(s) 1201, 1945
BmsI GCATC 5 cut(s) 943, 1026, 1268, 2188, 2596
BmuI ACTGGG 2 cut(s) 1201, 1945
BpiI GAAGAC 3 cut(s) 1338, 2189, 2216
BpmI CTGGAG 1 cut(s) 1615
Bpu10I CCTNAGC 1 cut(s) 2859
Bpu1102I GCTNAGC 1 cut(s) 693
BpuEI CTTGAG 5 cut(s) 412, 475, 620, 1766, 2473
BsaBI GATNNNNATC 1 cut(s) 2777
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 7 cut(s) 908, 1969, 2364, 2469, 2620, 2668, 2669
BsaWI WCCGGW 2 cut(s) 1028, 2509
BsaXI ACNNNNNCTCC 4 cut(s) 1453, 1483, 1828, 1858
Bsc4I CCNNNNNNNGG 7 cut(s) 325, 717, 752, 914, 1191, 1957, 2750
Bse118I RCCGGY 1 cut(s) 1920
Bse3DI GCAATG 2 cut(s) 806, 1812
Bse8I GATNNNNATC 1 cut(s) 2777
BseBI CCWGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
BseDI CCNNGG 7 cut(s) 908, 1969, 2364, 2469, 2620, 2668, 2669
BseGI GGATG 4 cut(s) 57, 365, 2018, 2078
BseJI GATNNNNATC 1 cut(s) 2777
BseLI CCNNNNNNNGG 7 cut(s) 325, 717, 752, 914, 1191, 1957, 2750
BseMI GCAATG 2 cut(s) 806, 1812
BseMII CTCAG 3 cut(s) 779, 1434, 2873
BseRI GAGGAG 2 cut(s) 472, 1825
BseXI GCAGC 4 cut(s) 228, 264, 1931, 2621
BseYI CCCAGC 2 cut(s) 61, 1255
BsgI GTGCAG 2 cut(s) 1930, 2448
Bsh1236I CGCG 1 cut(s) 2496
BshFI GGCC 5 cut(s) 672, 1127, 1920, 2098, 2644
BshNI GGYRCC 1 cut(s) 603
BsiHKAI GWGCWC 1 cut(s) 2590
BsiHKCI CYCGRG 4 cut(s) 680, 907, 1475, 2363
BsiSI CCGG 3 cut(s) 1029, 1921, 2510
BslFI GGGAC 1 cut(s) 670
BslI CCNNNNNNNGG 7 cut(s) 325, 717, 752, 914, 1191, 1957, 2750
BsmAI GTCTC 5 cut(s) 296, 502, 708, 797, 2222
BsmFI GGGAC 1 cut(s) 670
BsmI GAATGC 2 cut(s) 181, 2537
BsnI GGCC 5 cut(s) 672, 1127, 1920, 2098, 2644
BsoBI CYCGRG 4 cut(s) 680, 907, 1475, 2363
Bsp1286I GDGCHC 1 cut(s) 2590
Bsp1407I TGTACA 1 cut(s) 2902
Bsp1720I GCTNAGC 1 cut(s) 693
BspACI CCGC 5 cut(s) 329, 369, 2288, 2496, 2583
BspANI GGCC 5 cut(s) 672, 1127, 1920, 2098, 2644
BspCNI CTCAG 3 cut(s) 780, 1433, 2872
BspFNI CGCG 1 cut(s) 2496
BspLI GGNNCC 5 cut(s) 605, 892, 1126, 1788, 2643
BspMI ACCTGC 2 cut(s) 939, 1362
BspPI GGATC 4 cut(s) 925, 1718, 2040, 2362
BspT107I GGYRCC 1 cut(s) 603
BspTI CTTAAG 1 cut(s) 1831
BsrDI GCAATG 2 cut(s) 806, 1812
BsrFI RCCGGY 1 cut(s) 1920
BsrGI TGTACA 1 cut(s) 2902
BssAI RCCGGY 1 cut(s) 1920
BssECI CCNNGG 7 cut(s) 908, 1969, 2364, 2469, 2620, 2668, 2669
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 3 cut(s) 1969, 2469, 2620
Bst2UI CCWGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
Bst4CI ACNGT 7 cut(s) 558, 784, 1065, 1786, 1844, 2269, 2391
Bst6I CTCTTC 5 cut(s) 32, 299, 681, 927, 1278
BstACI GRCGYC 1 cut(s) 207
BstAFI CTTAAG 1 cut(s) 1831
BstAUI TGTACA 1 cut(s) 2902
BstC8I GCNNGC 2 cut(s) 1675, 2175
BstDEI CTNAG 9 cut(s) 551, 693, 788, 938, 1206, 1420, 2119, 2444, 2859
BstF5I GGATG 4 cut(s) 57, 365, 2018, 2078
BstFNI CGCG 1 cut(s) 2496
BstHHI GCGC 3 cut(s) 745, 2067, 2496
BstMAI GTCTC 5 cut(s) 296, 502, 708, 797, 2222
BstMWI GCNNNNNNNGC 1 cut(s) 213
BstNI CCWGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
BstNSI RCATGY 4 cut(s) 529, 2763, 2842, 2897
BstSCI CCNGG 6 cut(s) 158, 751, 1631, 2149, 2668, 2710
BstUI CGCG 1 cut(s) 2496
BstV1I GCAGC 4 cut(s) 228, 264, 1931, 2621
BstV2I GAAGAC 3 cut(s) 1338, 2189, 2216
BstX2I RGATCY 3 cut(s) 261, 831, 917
BstXI CCANNNNNNTGG 3 cut(s) 1135, 1436, 1577
BstYI RGATCY 3 cut(s) 261, 831, 917
BsuI GTATCC 2 cut(s) 584, 2568
BsuRI GGCC 5 cut(s) 672, 1127, 1920, 2098, 2644
BtgZI GCGATG 1 cut(s) 2192
BtsCI GGATG 4 cut(s) 57, 365, 2018, 2078
BtsI GCAGTG 1 cut(s) 101
BtsIMutI CAGTG 7 cut(s) 83, 101, 1126, 1189, 1906, 2274, 2387
BveI ACCTGC 2 cut(s) 939, 1362
Cac8I GCNNGC 2 cut(s) 1675, 2175
CaiI CAGNNNCTG 1 cut(s) 931
CfoI GCGC 3 cut(s) 745, 2067, 2496
Cfr10I RCCGGY 1 cut(s) 1920
CpoI CGGWCCG 1 cut(s) 1031
CseI GACGC 1 cut(s) 196
Csp6I GTAC 6 cut(s) 183, 1173, 1823, 2102, 2147, 2903
CspCI CAANNNNNGTGG 2 cut(s) 2119, 2154
CspI CGGWCCG 1 cut(s) 1031
CviQI GTAC 6 cut(s) 183, 1173, 1823, 2102, 2147, 2903
DdeI CTNAG 9 cut(s) 551, 693, 788, 938, 1206, 1420, 2119, 2444, 2859
EaeI YGGCCR 1 cut(s) 2096
Eam1104I CTCTTC 5 cut(s) 32, 299, 681, 927, 1278
EarI CTCTTC 5 cut(s) 32, 299, 681, 927, 1278
EciI GGCGGA 1 cut(s) 344
Eco130I CCWWGG 3 cut(s) 1969, 2469, 2620
Eco47I GGWCC 7 cut(s) 491, 1031, 1319, 1364, 1414, 2473, 2741
Eco57I CTGAAG 2 cut(s) 683, 908
Eco88I CYCGRG 4 cut(s) 680, 907, 1475, 2363
EcoO109I RGGNCCY 2 cut(s) 671, 2642
EcoRII CCWGG 6 cut(s) 158, 751, 1631, 2149, 2668, 2710
EcoT14I CCWWGG 3 cut(s) 1969, 2469, 2620
ErhI CCWWGG 3 cut(s) 1969, 2469, 2620
FaqI GGGAC 1 cut(s) 670
FbaI TGATCA 2 cut(s) 33, 2878
Fnu4HI GCNGC 4 cut(s) 217, 253, 1945, 2610
FokI GGATG 4 cut(s) 44, 352, 2005, 2085
Fsp4HI GCNGC 4 cut(s) 217, 253, 1945, 2610
FspBI CTAG 8 cut(s) 1505, 1514, 1544, 1622, 2187, 2462, 2864, 2917
GlaI GCGC 3 cut(s) 744, 2066, 2495
GluI GCNGC 4 cut(s) 217, 253, 1945, 2610
GsaI CCCAGC 2 cut(s) 65, 1259
GsuI CTGGAG 1 cut(s) 1615
HaeIII GGCC 5 cut(s) 672, 1127, 1920, 2098, 2644
HapII CCGG 3 cut(s) 1029, 1921, 2510
HgaI GACGC 1 cut(s) 196
HhaI GCGC 3 cut(s) 745, 2067, 2496
Hin1I GRCGYC 1 cut(s) 207
Hin6I GCGC 3 cut(s) 743, 2065, 2494
HinP1I GCGC 3 cut(s) 743, 2065, 2494
HindIII AAGCTT 2 cut(s) 695, 1675
HinfI GANTC 9 cut(s) 683, 756, 790, 1508, 1611, 1721, 2455, 2465, 2545
HpaII CCGG 3 cut(s) 1029, 1921, 2510
HphI GGTGA 7 cut(s) 1018, 1593, 1901, 2153, 2311, 2311, 2670
Hpy166II GTNNAC 5 cut(s) 70, 535, 945, 999, 2757
Hpy188I TCNGA 6 cut(s) 377, 402, 586, 871, 1423, 1610
Hpy8I GTNNAC 5 cut(s) 70, 535, 945, 999, 2757
HpyAV CCTTC 8 cut(s) 635, 855, 1094, 1568, 1922, 2231, 2626, 2687
HpyCH4III ACNGT 7 cut(s) 558, 784, 1065, 1786, 1844, 2269, 2391
HpyF10VI GCNNNNNNNGC 1 cut(s) 213
HpyF3I CTNAG 9 cut(s) 551, 693, 788, 938, 1206, 1420, 2119, 2444, 2859
Hsp92I GRCGYC 1 cut(s) 207
HspAI GCGC 3 cut(s) 743, 2065, 2494
Ksp22I TGATCA 2 cut(s) 33, 2878
LmnI GCTCC 3 cut(s) 111, 2293, 2512
Lsp1109I GCAGC 4 cut(s) 228, 264, 1931, 2621
LweI GCATC 5 cut(s) 943, 1026, 1268, 2188, 2596
MaeI CTAG 8 cut(s) 1505, 1514, 1544, 1622, 2187, 2462, 2864, 2917
MaeIII GTNAC 7 cut(s) 208, 347, 840, 1088, 2269, 2624, 2784
MflI RGATCY 3 cut(s) 261, 831, 917
MhlI GDGCHC 1 cut(s) 2590
MlsI TGGCCA 1 cut(s) 2098
MluNI TGGCCA 1 cut(s) 2098
MlyI GAGTC 5 cut(s) 692, 799, 1605, 2464, 2474
MmeI TCCRAC 4 cut(s) 702, 1077, 1590, 2433
Mox20I TGGCCA 1 cut(s) 2098
MroXI GAANNNNTTC 3 cut(s) 1640, 1995, 2701
MscI TGGCCA 1 cut(s) 2098
MslI CAYNNNNRTG 3 cut(s) 1875, 1999, 2898
Msp20I TGGCCA 1 cut(s) 2098
MspA1I CMGCKG 1 cut(s) 1944
MspCI CTTAAG 1 cut(s) 1831
MspI CCGG 3 cut(s) 1029, 1921, 2510
MspR9I CCNGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
Mva1269I GAATGC 2 cut(s) 181, 2537
MvaI CCWGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
MvnI CGCG 1 cut(s) 2496
MwoI GCNNNNNNNGC 1 cut(s) 213
NlaIV GGNNCC 5 cut(s) 605, 892, 1126, 1788, 2643
NmuCI GTSAC 3 cut(s) 208, 2269, 2784
NspI RCATGY 4 cut(s) 529, 2763, 2842, 2897
PaeR7I CTCGAG 2 cut(s) 680, 1475
PaqCI CACCTGC 1 cut(s) 939
PasI CCCWGGG 1 cut(s) 2669
PciI ACATGT 2 cut(s) 525, 2759
PctI GAATGC 2 cut(s) 181, 2537
PdmI GAANNNNTTC 3 cut(s) 1640, 1995, 2701
PfeI GAWTC 4 cut(s) 756, 1508, 1721, 2545
PflMI CCANNNNNTGG 1 cut(s) 1191
PfoI TCCNGGA 3 cut(s) 751, 1631, 2710
PkrI GCNGC 4 cut(s) 218, 254, 1946, 2611
PleI GAGTC 5 cut(s) 691, 798, 1605, 2463, 2473
PpsI GAGTC 5 cut(s) 691, 798, 1605, 2463, 2473
PscI ACATGT 2 cut(s) 525, 2759
PshBI ATTAAT 3 cut(s) 1179, 1530, 2085
Psp6I CCWGG 6 cut(s) 158, 751, 1631, 2149, 2668, 2710
PspFI CCCAGC 2 cut(s) 61, 1255
PspGI CCWGG 6 cut(s) 158, 751, 1631, 2149, 2668, 2710
PspN4I GGNNCC 5 cut(s) 605, 892, 1126, 1788, 2643
PstNI CAGNNNCTG 1 cut(s) 931
PsuI RGATCY 3 cut(s) 261, 831, 917
PvuII CAGCTG 1 cut(s) 1944
RsaI GTAC 6 cut(s) 184, 1174, 1824, 2103, 2148, 2904
RsaNI GTAC 6 cut(s) 183, 1173, 1823, 2102, 2147, 2903
RseI CAYNNNNRTG 3 cut(s) 1875, 1999, 2898
Rsr2I CGGWCCG 1 cut(s) 1031
RsrII CGGWCCG 1 cut(s) 1031
SatI GCNGC 4 cut(s) 217, 253, 1945, 2610
ScaI AGTACT 3 cut(s) 184, 1824, 2103
SchI GAGTC 5 cut(s) 692, 799, 1605, 2464, 2474
ScrFI CCNGG 6 cut(s) 160, 753, 1633, 2151, 2670, 2712
SduI GDGCHC 1 cut(s) 2590
SfaNI GCATC 5 cut(s) 943, 1026, 1268, 2188, 2596
Sfr274I CTCGAG 2 cut(s) 680, 1475
SinI GGWCC 7 cut(s) 491, 1031, 1319, 1364, 1414, 2473, 2741
SlaI CTCGAG 2 cut(s) 680, 1475
SmiMI CAYNNNNRTG 3 cut(s) 1875, 1999, 2898
SmlI CTYRAG 8 cut(s) 391, 454, 635, 680, 1475, 1745, 1831, 2452
SmoI CTYRAG 8 cut(s) 391, 454, 635, 680, 1475, 1745, 1831, 2452
SsiI CCGC 5 cut(s) 329, 369, 2288, 2496, 2583
SspMI CTAG 8 cut(s) 1505, 1514, 1544, 1622, 2187, 2462, 2864, 2917
StyD4I CCNGG 6 cut(s) 158, 751, 1631, 2149, 2668, 2710
StyI CCWWGG 3 cut(s) 1969, 2469, 2620
TaaI ACNGT 7 cut(s) 558, 784, 1065, 1786, 1844, 2269, 2391
TaqI TCGA 9 cut(s) 441, 681, 1012, 1079, 1221, 1242, 1476, 1691, 2480
TaqII GACCGA 3 cut(s) 894, 1048, 2729
TatI WGTACW 4 cut(s) 182, 1822, 2101, 2902
TfiI GAWTC 4 cut(s) 756, 1508, 1721, 2545
TscAI CASTG 7 cut(s) 83, 108, 1126, 1196, 1906, 2274, 2394
TseFI GTSAC 3 cut(s) 208, 2269, 2784
TseI GCWGC 4 cut(s) 216, 252, 1944, 2609
Tsp45I GTSAC 3 cut(s) 208, 2269, 2784
TspDTI ATGAA 7 cut(s) 17, 293, 1511, 1550, 1565, 1587, 2195
TspGWI ACGGA 3 cut(s) 700, 1101, 2367
TspRI CASTG 7 cut(s) 83, 108, 1126, 1196, 1906, 2274, 2394
Van91I CCANNNNNTGG 1 cut(s) 1191
Vha464I CTTAAG 1 cut(s) 1831
VpaK11BI GGWCC 7 cut(s) 491, 1031, 1319, 1364, 1414, 2473, 2741
VspI ATTAAT 3 cut(s) 1179, 1530, 2085
XapI RAATTY 7 cut(s) 403, 432, 517, 950, 970, 1332, 2054
XbaI TCTAGA 2 cut(s) 1513, 1543
XceI RCATGY 4 cut(s) 529, 2763, 2842, 2897
XcmI CCANNNNNNNNNTGG 1 cut(s) 2708
XhoI CTCGAG 2 cut(s) 680, 1475
XmnI GAANNNNTTC 3 cut(s) 1640, 1995, 2701
XspI CTAG 8 cut(s) 1505, 1514, 1544, 1622, 2187, 2462, 2864, 2917
ZrmI AGTACT 3 cut(s) 184, 1824, 2103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.