Rh5DG337500

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
45372050 .. 45374761
2712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG337500.1

Sequence Viewer

Length: 2406 bp
ATGAGACTTGATAATCCAAATTTGAGTTTGCTCATTGGGAACCTTTCTGAGCTTATGGAACTTCGTCTTGATGGTGTAGACATATCATCACAGAAGAATTCTTGGTGCCAAGCCATATCAACCTCATTGCCAAAGTTGAGGGTGCTGAGCTTGTCCAGTTGTACTCTTTCAGGCCCTATTGATTCTTCCTTACGGAAGCTTCACTCCCTCTCATTGATTCATATAGAATATAATCATTTGTCTTCTCCAGTTCCAGAATTCTTCTCAAACTTCACAAATTTGACTTCCTTACGCTTTGGTAATTCTGGCTTACATGGTACTTTCCCAAATAAGATCTTTCAGTTACCTAGATTACAGACTATTCACTTATGGGGTAATCCACAGCTTCAAGGTTCATTACCAGAGTTTCCGAAAAATGGATTGATTCAATCTCTAGTTCTAAGCGGATCAAATTTTTCAGGGTTATTGCCATACTCTATTGGAGTCCTCACAATGCTGTCCCAATTAGATGTTTCATATTGCAATTTTACAGGACCAATCCCAAAGTCGGTGGAAAATCTTGCAGGATTGGTTTACTTGGACTTGTCAGGGAACAAGTTTAATGGTTCAGTTCCATTTTTCAGAATGGCCAAGAATCTTACCCAAATAAATCTCTCTAAGAATTACCTAACAGGTCAGATTAATTCCACTCATTGGGAGCACCTTACGAATCTGCTGATTCTTGACTTGCATTCTAATCTACTTGATGGAAGTTTTCCCTTCTCTCTATTTTTGCTTCCCTCACTTGAGAAAATATTACTTTCCAACAACCAATTCTCTGGTCAGTTGCTTGAAGTCCCCAATATCTCTTCGTACATTTTGGACACTCTTGATTTGAGTAGCAATAATTTGGAAGGGCCAGTTCCCAGGTCTCTCTTTAATTTGCAAGGGCTCAAGATTCTTTCACTTTCTTCAAACAACTTCAGTGGCCTTCTTTGTCTCAATGATCTTCAGCAGCTAAGGAATCTTTCCAGTGTTGATCTTTCGCACAACAGCTTGTTGATTACTTATGAGCATCATACTAATTCCTCATATTCTTCCTTTCCTCAACTGACCCCATTGCTGTTGGCTTCTGGAGAGTTAAGAACGTTCCCTGAGTTCTTGAGGAATCAATCTGAATTAGCCTATTTGGACCTTTCAGAAAATCAGATTTTCGGCCAGATACCCAATTGGATTTGGAGACTCAACCTTCTTCAGTTAAATCTTTCTTGCAACTCCCTGGTAACTCTAGAAGGTCCAATGCTAAATCTCTCGTCTCGTCTATTCGTTCTTGATCTTCATTCCAACCAGCTTCAGGGACAAATCCCAGTTTTCTCATCACCTGCTTATTATTACAACATTCAATACCTGGATTACTCAAGGAATAATTTCAGCTCTAGCATACCAGCTGATATCGGGAATATCCTTAATTACACTAGATTCTTTTCTATTTCGAACAACAACATCCACGGCAGCATCCCAGGATCGATATGCAATGCATTTTATCTTCAGGTTCTTGATCTTTCCAACAATTCTTTGAGTGCCATGATTCCCCCATGTTTGACTGCAATGAGCAGTAATCTTGCAGTTCTTAATTTAGGGACAAACAGCCTAACTGGAAAATGCATGAGGAGTTGGCGAGCAATGATGGCTAATGATTCCTTGTCAAAGCTCAAACACCTTCAGTTTGAGGTGTTCACTCAGGTTTATTATGATGATGCAATAACTGTTACCAACAAAGGTCTAGAGATGAAGCTGGAAAAGATTCTAACTATTTTCACCTCAATTGACTTCTCGGGCAACAAATTCAGCGGATCAATACCTGAAGAAGTTGGAGAGCTCAAATCACTCTATGTCCTTAACTTGTCCAGCAATGCTCTCACAGGTGAAGTCCCATCATCTTTGGGAGACTTACAACACATTGAGTCCTTGGACTTGTCAAGTAACAAACTTACCGGAAATATTCCACTGCAACTTGCGAAGCTCACTTTCCTTGCAGTCTTGAATCTCTCAAATAATCAACTTGTTGGAAGGATCCCAAGCAGTACTCAGATTTCAACATTTTCTGCAGATTCCTTTACAGGGAACAAAGCATTATGTGGATTTCCTTTGAATGTACCATGCAGTAATACCAACGAGACAACAAAGTTTCAATACCACAAGTCAGGAATTGGGTCGGTGGTTGATTTGAATGTTATCGGTACTGTTGAGATTGGATGTATTGTTGGCTTTGGAATTGCTACCGGCTCACTTGTGTTCTGCAATAGATGGAGGAAATGGTATTACAGAGCTATGTGTAACATCATATTAAAGATATTCCCTCAGCTGGATCACAGATTTGGTCCACACAGAAGACATGTTTACATAAATCCAAGGTGGGGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

801

Amino Acids

89.0

Weight (kDa)

7.27

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 622 - 681 1.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1369
Acc36I ACCTGC 1 cut(s) 1369
AccB1I GGYRCC 1 cut(s) 105
AccB7I CCANNNNNTGG 1 cut(s) 693
AccI GTMKAC 1 cut(s) 78
AciI CCGC 2 cut(s) 444, 1830
AclI AACGTT 1 cut(s) 1127
AclWI GGATC 6 cut(s) 454, 1510, 1840, 2047, 2060, 2355
AcoI YGGCCR 2 cut(s) 627, 1195
AcsI RAATTY 6 cut(s) 19, 97, 257, 277, 451, 1823
AcuI CTGAAG 7 cut(s) 946, 974, 1217, 1316, 1511, 1685, 1863
AfaI GTAC 6 cut(s) 163, 319, 854, 2065, 2136, 2221
AfiI CCNNNNNNNGG 7 cut(s) 416, 547, 693, 1333, 2100, 2344, 2396
AflIII ACRYGT 1 cut(s) 2374
AjnI CCWGG 4 cut(s) 905, 1257, 1386, 1498
AjuI GAANNNNNNNTTGG 2 cut(s) 797, 829
Alw21I GWGCWC 2 cut(s) 702, 1860
Alw26I GTCTC 6 cut(s) 915, 983, 1213, 1299, 1920, 2150
AlwI GGATC 6 cut(s) 454, 1510, 1840, 2047, 2060, 2355
Ama87I CYCGRG 1 cut(s) 1813
AoxI GGCC 5 cut(s) 172, 627, 896, 967, 1195
ApeKI GCWGC 2 cut(s) 994, 1491
ApoI RAATTY 6 cut(s) 19, 97, 257, 277, 451, 1823
AseI ATTAAT 1 cut(s) 681
Asp700I GAANNNNTTC 2 cut(s) 1406, 1782
AspS9I GGNCC 6 cut(s) 173, 533, 896, 1171, 1274, 2360
AsuHPI GGTGA 3 cut(s) 1350, 1789, 1916
AsuII TTCGAA 1 cut(s) 1472
AvaI CYCGRG 1 cut(s) 1813
AvaII GGWCC 4 cut(s) 533, 1171, 1274, 2360
BalI TGGCCA 1 cut(s) 629
BamHI GGATCC 1 cut(s) 2052
BanI GGYRCC 1 cut(s) 105
BanII GRGCYC 2 cut(s) 933, 1860
BbsI GAAGAC 2 cut(s) 234, 2377
Bbv12I GWGCWC 2 cut(s) 702, 1860
BbvCI CCTCAGC 1 cut(s) 2340
BbvI GCAGC 2 cut(s) 1006, 1503
BccI CCATC 5 cut(s) 65, 740, 1660, 1921, 2280
BceAI ACGGC 1 cut(s) 1504
BciT130I CCWGG 4 cut(s) 907, 1259, 1388, 1500
BcoDI GTCTC 6 cut(s) 915, 983, 1213, 1299, 1920, 2150
BfaI CTAG 6 cut(s) 348, 434, 1268, 1416, 1455, 1763
BfmI CTRYAG 1 cut(s) 2085
BfuAI ACCTGC 1 cut(s) 1369
BglII AGATCT 1 cut(s) 333
BisI GCNGC 2 cut(s) 995, 1492
BlpI GCTNAGC 1 cut(s) 146
BlsI GCNGC 2 cut(s) 996, 1493
BmcAI AGTACT 1 cut(s) 2065
Bme1390I CCNGG 4 cut(s) 907, 1259, 1388, 1500
Bme18I GGWCC 4 cut(s) 533, 1171, 1274, 2360
BmeT110I CYCGRG 1 cut(s) 1813
BmgT120I GGNCC 6 cut(s) 173, 533, 896, 1171, 1274, 2360
BmiI GGNNCC 3 cut(s) 41, 107, 2054
BmrFI CCNGG 4 cut(s) 907, 1259, 1388, 1500
BmrI ACTGGG 1 cut(s) 1340
BmsI GCATC 3 cut(s) 1063, 1503, 1726
BmuI ACTGGG 1 cut(s) 1340
BpiI GAAGAC 2 cut(s) 234, 2377
BpmI CTGGAG 2 cut(s) 231, 1134
Bpu10I CCTNAGC 2 cut(s) 998, 2340
Bpu1102I GCTNAGC 1 cut(s) 146
Bpu14I TTCGAA 1 cut(s) 1472
BpuEI CTTGAG 4 cut(s) 806, 917, 1162, 1381
Bsa29I ATCGAT 1 cut(s) 1505
BsaI GGTCTC 1 cut(s) 915
BsaJI CCNNGG 6 cut(s) 905, 1257, 1486, 1498, 1947, 2390
BsaWI WCCGGW 1 cut(s) 1973
Bsc4I CCNNNNNNNGG 7 cut(s) 416, 547, 693, 1333, 2100, 2344, 2396
Bse118I RCCGGY 1 cut(s) 2261
Bse1I ACTGG 6 cut(s) 156, 248, 899, 1011, 1346, 1639
Bse3DI GCAATG 6 cut(s) 125, 1097, 1519, 1593, 1668, 1897
BseBI CCWGG 4 cut(s) 907, 1259, 1388, 1500
BseCI ATCGAT 1 cut(s) 1505
BseDI CCNNGG 6 cut(s) 905, 1257, 1486, 1498, 1947, 2390
BseGI GGATG 3 cut(s) 1482, 1494, 2240
BseLI CCNNNNNNNGG 7 cut(s) 416, 547, 693, 1333, 2100, 2344, 2396
BseMI GCAATG 6 cut(s) 125, 1097, 1519, 1593, 1668, 1897
BseMII CTCAG 6 cut(s) 39, 137, 1125, 1733, 2081, 2354
BseNI ACTGG 6 cut(s) 156, 248, 899, 1011, 1346, 1639
BseRI GAGGAG 1 cut(s) 1663
BseXI GCAGC 2 cut(s) 1006, 1503
BshFI GGCC 5 cut(s) 174, 629, 898, 969, 1197
BshNI GGYRCC 1 cut(s) 105
BshVI ATCGAT 1 cut(s) 1505
BsiHKAI GWGCWC 2 cut(s) 702, 1860
BsiHKCI CYCGRG 1 cut(s) 1813
BsiSI CCGG 2 cut(s) 1974, 2262
BslFI GGGAC 5 cut(s) 484, 821, 1350, 1633, 1895
BslI CCNNNNNNNGG 7 cut(s) 416, 547, 693, 1333, 2100, 2344, 2396
BsmAI GTCTC 6 cut(s) 915, 983, 1213, 1299, 1920, 2150
BsmBI CGTCTC 1 cut(s) 1299
BsmFI GGGAC 5 cut(s) 484, 821, 1350, 1633, 1895
BsmI GAATGC 1 cut(s) 730
BsnI GGCC 5 cut(s) 174, 629, 898, 969, 1197
Bso31I GGTCTC 1 cut(s) 915
BsoBI CYCGRG 1 cut(s) 1813
Bsp119I TTCGAA 1 cut(s) 1472
Bsp1286I GDGCHC 3 cut(s) 702, 933, 1860
Bsp1720I GCTNAGC 1 cut(s) 146
BspACI CCGC 2 cut(s) 444, 1830
BspANI GGCC 5 cut(s) 174, 629, 898, 969, 1197
BspCNI CTCAG 6 cut(s) 40, 138, 1126, 1732, 2080, 2353
BspDI ATCGAT 1 cut(s) 1505
BspLI GGNNCC 3 cut(s) 41, 107, 2054
BspMAI CTGCAG 1 cut(s) 2089
BspMI ACCTGC 1 cut(s) 1369
BspPI GGATC 6 cut(s) 454, 1510, 1840, 2047, 2060, 2355
BspT104I TTCGAA 1 cut(s) 1472
BspT107I GGYRCC 1 cut(s) 105
BspTNI GGTCTC 1 cut(s) 915
BsrDI GCAATG 6 cut(s) 125, 1097, 1519, 1593, 1668, 1897
BsrFI RCCGGY 1 cut(s) 2261
BsrI ACTGG 6 cut(s) 156, 248, 899, 1011, 1346, 1639
BssAI RCCGGY 1 cut(s) 2261
BssECI CCNNGG 6 cut(s) 905, 1257, 1486, 1498, 1947, 2390
BssT1I CCWWGG 2 cut(s) 1947, 2390
Bst2UI CCWGG 4 cut(s) 907, 1259, 1388, 1500
Bst4CI ACNGT 2 cut(s) 1747, 2224
Bst6I CTCTTC 1 cut(s) 853
BstBI TTCGAA 1 cut(s) 1472
BstC8I GCNNGC 1 cut(s) 1659
BstDEI CTNAG 9 cut(s) 48, 146, 440, 657, 998, 1134, 1719, 2067, 2340
BstDSI CCRYGG 1 cut(s) 1486
BstF5I GGATG 3 cut(s) 1482, 1494, 2240
BstMAI GTCTC 6 cut(s) 915, 983, 1213, 1299, 1920, 2150
BstMWI GCNNNNNNNGC 1 cut(s) 1667
BstNI CCWGG 4 cut(s) 907, 1259, 1388, 1500
BstNSI RCATGY 1 cut(s) 2378
BstSCI CCNGG 4 cut(s) 905, 1257, 1386, 1498
BstSFI CTRYAG 1 cut(s) 2085
BstV1I GCAGC 2 cut(s) 1006, 1503
BstV2I GAAGAC 2 cut(s) 234, 2377
BstX2I RGATCY 2 cut(s) 333, 2052
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 2 cut(s) 333, 2052
Bsu15I ATCGAT 1 cut(s) 1505
BsuRI GGCC 5 cut(s) 174, 629, 898, 969, 1197
BsuTUI ATCGAT 1 cut(s) 1505
BtgI CCRYGG 1 cut(s) 1486
BtsCI GGATG 3 cut(s) 1482, 1494, 2240
BtsI GCAGTG 1 cut(s) 1985
BtsIMutI CAGTG 3 cut(s) 970, 1018, 1985
BveI ACCTGC 1 cut(s) 1369
Cac8I GCNNGC 1 cut(s) 1659
Cfr10I RCCGGY 1 cut(s) 2261
Cfr13I GGNCC 6 cut(s) 173, 533, 896, 1171, 1274, 2360
ClaI ATCGAT 1 cut(s) 1505
Csp6I GTAC 6 cut(s) 162, 318, 853, 2064, 2135, 2220
CspCI CAANNNNNGTGG 4 cut(s) 531, 566, 946, 981
CviAII CATG 6 cut(s) 314, 1564, 1575, 1645, 2139, 2375
CviQI GTAC 6 cut(s) 162, 318, 853, 2064, 2135, 2220
DdeI CTNAG 9 cut(s) 48, 146, 440, 657, 998, 1134, 1719, 2067, 2340
EaeI YGGCCR 2 cut(s) 627, 1195
Eam1104I CTCTTC 1 cut(s) 853
EarI CTCTTC 1 cut(s) 853
Ecl136II GAGCTC 1 cut(s) 1858
Eco130I CCWWGG 2 cut(s) 1947, 2390
Eco24I GRGCYC 2 cut(s) 933, 1860
Eco31I GGTCTC 1 cut(s) 915
Eco32I GATATC 1 cut(s) 1432
Eco47I GGWCC 4 cut(s) 533, 1171, 1274, 2360
Eco53kI GAGCTC 1 cut(s) 1858
Eco57I CTGAAG 7 cut(s) 946, 974, 1217, 1316, 1511, 1685, 1863
Eco88I CYCGRG 1 cut(s) 1813
EcoICRI GAGCTC 1 cut(s) 1858
EcoO109I RGGNCCY 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 97, 257
EcoRII CCWGG 4 cut(s) 905, 1257, 1386, 1498
EcoRV GATATC 1 cut(s) 1432
EcoT14I CCWWGG 2 cut(s) 1947, 2390
EcoT22I ATGCAT 2 cut(s) 1519, 1646
EcoT38I GRGCYC 2 cut(s) 933, 1860
ErhI CCWWGG 2 cut(s) 1947, 2390
Esp3I CGTCTC 1 cut(s) 1299
FaeI CATG 6 cut(s) 317, 1567, 1578, 1648, 2142, 2378
FaqI GGGAC 5 cut(s) 484, 821, 1350, 1633, 1895
FatI CATG 6 cut(s) 313, 1563, 1574, 1644, 2138, 2374
FblI GTMKAC 1 cut(s) 78
Fnu4HI GCNGC 2 cut(s) 995, 1492
FokI GGATG 3 cut(s) 1469, 1481, 2247
FriOI GRGCYC 2 cut(s) 933, 1860
Fsp4HI GCNGC 2 cut(s) 995, 1492
FspBI CTAG 6 cut(s) 348, 434, 1268, 1416, 1455, 1763
GluI GCNGC 2 cut(s) 995, 1492
GsuI CTGGAG 2 cut(s) 231, 1134
HaeIII GGCC 5 cut(s) 174, 629, 898, 969, 1197
HapII CCGG 2 cut(s) 1974, 2262
Hin1II CATG 6 cut(s) 317, 1567, 1578, 1648, 2142, 2378
HindIII AAGCTT 1 cut(s) 197
HpaII CCGG 2 cut(s) 1974, 2262
HphI GGTGA 3 cut(s) 1350, 1789, 1916
Hpy166II GTNNAC 5 cut(s) 79, 574, 1716, 2363, 2380
Hpy188I TCNGA 8 cut(s) 49, 411, 623, 678, 1156, 1180, 1188, 2070
Hpy8I GTNNAC 5 cut(s) 79, 574, 1716, 2363, 2380
HpyAV CCTTC 7 cut(s) 769, 887, 980, 1238, 1265, 1709, 2043
HpyCH4III ACNGT 2 cut(s) 1747, 2224
HpyCH4IV ACGT 1 cut(s) 1127
HpyF10VI GCNNNNNNNGC 1 cut(s) 1667
HpyF3I CTNAG 9 cut(s) 48, 146, 440, 657, 998, 1134, 1719, 2067, 2340
HpySE526I ACGT 1 cut(s) 1127
Hsp92II CATG 6 cut(s) 317, 1567, 1578, 1648, 2142, 2378
LmnI GCTCC 1 cut(s) 697
Lsp1109I GCAGC 2 cut(s) 1006, 1503
LweI GCATC 3 cut(s) 1063, 1503, 1726
MaeI CTAG 6 cut(s) 348, 434, 1268, 1416, 1455, 1763
MaeII ACGT 1 cut(s) 1127
MaeIII GTNAC 5 cut(s) 342, 1261, 1747, 1961, 2315
MfeI CAATTG 2 cut(s) 1207, 1803
MflI RGATCY 2 cut(s) 333, 2052
MhlI GDGCHC 3 cut(s) 702, 933, 1860
MlsI TGGCCA 1 cut(s) 629
MluNI TGGCCA 1 cut(s) 629
MlyI GAGTC 3 cut(s) 492, 1215, 1952
MmeI TCCRAC 5 cut(s) 828, 1347, 1569, 1831, 2026
Mox20I TGGCCA 1 cut(s) 629
Mph1103I ATGCAT 2 cut(s) 1519, 1646
MroXI GAANNNNTTC 2 cut(s) 1406, 1782
MscI TGGCCA 1 cut(s) 629
MseI TTAA 9 cut(s) 600, 681, 918, 1121, 1238, 1446, 1611, 1878, 2327
Msp20I TGGCCA 1 cut(s) 629
MspA1I CMGCKG 3 cut(s) 1427, 1830, 2344
MspI CCGG 2 cut(s) 1974, 2262
MspR9I CCNGG 4 cut(s) 907, 1259, 1388, 1500
MunI CAATTG 2 cut(s) 1207, 1803
Mva1269I GAATGC 1 cut(s) 730
MvaI CCWGG 4 cut(s) 907, 1259, 1388, 1500
MwoI GCNNNNNNNGC 1 cut(s) 1667
NlaIII CATG 6 cut(s) 317, 1567, 1578, 1648, 2142, 2378
NlaIV GGNNCC 3 cut(s) 41, 107, 2054
NsiI ATGCAT 2 cut(s) 1519, 1646
NspI RCATGY 1 cut(s) 2378
NspV TTCGAA 1 cut(s) 1472
PaqCI CACCTGC 1 cut(s) 1369
PciI ACATGT 1 cut(s) 2374
PctI GAATGC 1 cut(s) 730
PdmI GAANNNNTTC 2 cut(s) 1406, 1782
PflMI CCANNNNNTGG 1 cut(s) 693
PkrI GCNGC 2 cut(s) 996, 1493
PleI GAGTC 3 cut(s) 491, 1215, 1951
PpsI GAGTC 3 cut(s) 491, 1215, 1951
PscI ACATGT 1 cut(s) 2374
PshBI ATTAAT 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 1860
Psp1406I AACGTT 1 cut(s) 1127
Psp6I CCWGG 4 cut(s) 905, 1257, 1386, 1498
PspGI CCWGG 4 cut(s) 905, 1257, 1386, 1498
PspN4I GGNNCC 3 cut(s) 41, 107, 2054
PspPI GGNCC 6 cut(s) 173, 533, 896, 1171, 1274, 2360
PstI CTGCAG 1 cut(s) 2089
PsuI RGATCY 2 cut(s) 333, 2052
PvuII CAGCTG 2 cut(s) 1427, 2344
RsaI GTAC 6 cut(s) 163, 319, 854, 2065, 2136, 2221
RsaNI GTAC 6 cut(s) 162, 318, 853, 2064, 2135, 2220
SacI GAGCTC 1 cut(s) 1860
SaqAI TTAA 9 cut(s) 600, 681, 918, 1121, 1238, 1446, 1611, 1878, 2327
SatI GCNGC 2 cut(s) 995, 1492
Sau96I GGNCC 6 cut(s) 173, 533, 896, 1171, 1274, 2360
ScaI AGTACT 1 cut(s) 2065
SchI GAGTC 3 cut(s) 492, 1215, 1952
ScrFI CCNGG 4 cut(s) 907, 1259, 1388, 1500
SduI GDGCHC 3 cut(s) 702, 933, 1860
SfaNI GCATC 3 cut(s) 1063, 1503, 1726
SfcI CTRYAG 1 cut(s) 2085
SfuI TTCGAA 1 cut(s) 1472
SinI GGWCC 4 cut(s) 533, 1171, 1274, 2360
SmlI CTYRAG 4 cut(s) 785, 932, 1141, 1396
SmoI CTYRAG 4 cut(s) 785, 932, 1141, 1396
SsiI CCGC 2 cut(s) 444, 1830
SspI AATATT 2 cut(s) 795, 1981
SspMI CTAG 6 cut(s) 348, 434, 1268, 1416, 1455, 1763
SstI GAGCTC 1 cut(s) 1860
StyD4I CCNGG 4 cut(s) 905, 1257, 1386, 1498
StyI CCWWGG 2 cut(s) 1947, 2390
TaaI ACNGT 2 cut(s) 1747, 2224
TaiI ACGT 1 cut(s) 1130
TaqI TCGA 2 cut(s) 1472, 1505
TatI WGTACW 2 cut(s) 161, 2063
Tru1I TTAA 9 cut(s) 600, 681, 918, 1121, 1238, 1446, 1611, 1878, 2327
Tru9I TTAA 9 cut(s) 600, 681, 918, 1121, 1238, 1446, 1611, 1878, 2327
TscAI CASTG 3 cut(s) 970, 1018, 1992
TseI GCWGC 2 cut(s) 994, 1491
TspDTI ATGAA 5 cut(s) 209, 384, 504, 1307, 1784
TspGWI ACGGA 1 cut(s) 208
TspRI CASTG 3 cut(s) 970, 1018, 1992
Van91I CCANNNNNTGG 1 cut(s) 693
VpaK11BI GGWCC 4 cut(s) 533, 1171, 1274, 2360
VspI ATTAAT 1 cut(s) 681
XapI RAATTY 6 cut(s) 19, 97, 257, 277, 451, 1823
XbaI TCTAGA 2 cut(s) 1267, 1762
XceI RCATGY 1 cut(s) 2378
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 2 cut(s) 1406, 1782
XspI CTAG 6 cut(s) 348, 434, 1268, 1416, 1455, 1763
ZrmI AGTACT 1 cut(s) 2065
Zsp2I ATGCAT 2 cut(s) 1519, 1646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.