Rw1G020570

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000047
Physical Location & Seq
Forward (+)
44186139 .. 44189092
2954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G020570.1

Sequence Viewer

Length: 2826 bp
ATGAAAACTTCGCTACATTTCTTCCTTCTCTTGATCACATTCTGGGTCAGTATCATCATCCCAGCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATTACTGCTCCAATTCAACAAAAGCCTCGTGTTCTTTGATTCTTTCCATCCTTCCACCAAGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTCGGCGTCACTTGCAGCCGTGATGGGCTTGTTCTGGGTCTTGACGTAAGCAGCGAACATATCTTTGATGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCAGTATCTTCAAAGGCTCAATCTGGCGGACAACCAACTTGGCAGTATCATTGAATCAATTCCATCCGCGATCGGAAATCTCCTGAACTTGAGGTATCTTAATTTATCTCATAATTATTATTCAGGGAAAATTCCCATCGAGATTTCTCGCTTGAGGAGGTTGGAAGTTCTCGATTTTTCTAACTTCCATCATTTTGGTATCCCCTACAATATTGGAAGTCCAAATTTATACATGTTGGTTCACAACCTCACAGAGCTTAGAGAGTTATATCTTGATGGTGTCCAAATATCAGAACAGGGGAGTGAGTGGGGCCGAGCCATATCTTCCCTTCCCAACCTCAGGGTCTTGAGCATGTCCTCTTGTAATCTTTCAGGCCCTTTTCTCGAGTCCCTTGCTAAGCTTCAGTCTCTATCAGTGATCAGGTTGGACGGGAACAATATCTCTGCGCCAGTTCCAGGATTCCTTGCCAACTTTTCAAACTTGACTGTCTTGAATCTCCACAATTGCTCGTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGCATTGACCTTTCAGATAATGACCAACTTGATGGTTCCTTGCCAGAATTCCCAAGGGATGGACATCTTCAGCACCTGGATCTAAGCAGGACAAAATTTGCAGGGTTATTGCCAAATTCTATTGGCAACCTCAAAATGTTGTCCATCATAGATATTCATGATTGCAAGTTCACCGGACCGATCCCCAAGTCAATGACAAACCTTACACAATTGGTTTCTTTGTCGATGTCTCGTAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATGTGGGCGACATAGACCTTTCCTACAATGGTCTAACAGGTACTATTAATTCCACCTACTGGAGAAACCTTACTAACCTAACTTCGCTCATTTTAGGATCCAATATGCTCGATGGGAATATCTCAGTATTTCTGTTTTCTCTTCCTCTTTTGAAGCTGCAATGGCTAGATCTTTCCAGCAATCAGTTCTTTGGTCCATTGCCTGAAATTTCAAATGTGTCTTCCTACTTGCTGAATGGCCTTGATCTCGAACTTGATTTGAGAAATCAATCTGACTTGGGCATTTTGGACCTTTCAGACAACCAGATAAATGGCAAGATACCCGATTGGATTTGGAGTTTAAGTAATCTCAGTTTCCTAAATCTTACTTATTTCTCCAGGAATTATTTCAACTCTATCATACCGACTACCATTGGAGATATGTTTCCCGGCACAAATTTTCTCTCTCTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTGTGCAATTCACAATTTCTTGAGGTTCTTGATCTATCCAATAATTCTTTGAGTGGCAACGTTCCCCAATGCTTAACTGCAATGGCGAAGCTTGAAGTACTCAACATAAGGAGAAACAATCTTACAAATGTTGATGACTTCTCTCATAATTGCCAGTTAAAAGCTCTAGACATCAGTGAAAATCACCTTCAAGGCCGGTTTCTAAAATCTCTTGTCAACTGCACCCAGTTAGAGATCTTAAACCTTGGAAACAATTTGATAACAGGACCATTTCCATGCTTTTTAAGGAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTTTATGGGCGCATTGGATGTCACAAGACTAATGGCACTTGGCCGGTACTTCAAATCATAGACTTAGCTCACAACAATTTTAGTGGTGAAGTACTTGGAACAACTTTGACAACTTGGCAGGCGATGAGGACTAGCAAAGATGATGCCCTACGGAAGATCAATAACCTTCAATATGAGTCGGTGGGTGGAGTTTATTATCAAGAAGATACAATCTTGGTTACCAACAAAGGTATAGAGATGGAGCTGGTGAATGTTTTAACTATCTTCACCTCCATTGACTTCTCGTGCAACAAGTTCAACGGATCAATACCCGAGGAAATTGGAGAACTCCAATCATTGTATGCCCTCAACTTGGCCAACAATGCTTTCACAGGTGCAGTTCCATCATCACTCAGTAACCTGAGTCAGCTAGAGTCCTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGAATTCTTGAATCTCTCATATAATCAGTTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAAGAACCCAGGGTTCTCACCACCAAAGCTGGAAGGAAACCATTCAAATCCTGGACATGAGATTGATTGGGATATTATCAGTCCTGAAATTGGGTTTACATGTGGGTTTGGGATTGCCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTATGACATGCTTCTAAAGATATTCCCTCAGCTAGAACAAAGACTTGGTCATCACAGGAGGCATGTTTATGTACATCAAAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

941

Amino Acids

105.29

Weight (kDa)

6.12

Isoelectric Point (pI)

41.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 72 7.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 171 8.5e-07 Leucine-rich repeat region
LRR_8 PF13855 236 - 294 3.8e-07 Leucine rich repeat
LRR_14 PF23598 308 - 501 1.5e-07 Leucine-rich repeat region
LRR_8 PF13855 526 - 581 2.2e-06 Leucine rich repeat
LRR_8 PF13855 547 - 603 3.7e-07 Leucine rich repeat
LRR_14 PF23598 752 - 816 2.3e-06 Leucine-rich repeat region
LRR_8 PF13855 762 - 821 8.5e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 917, 1194
AccBSI CCGCTC 1 cut(s) 2394
AccII CGCG 1 cut(s) 368
AciI CCGC 4 cut(s) 326, 366, 2394, 2481
AclI AACGTT 1 cut(s) 1680
AclWI GGATC 7 cut(s) 945, 1033, 1227, 1240, 1613, 1935, 2260
AcoI YGGCCR 2 cut(s) 1991, 2304
AcsI RAATTY 9 cut(s) 429, 523, 905, 953, 973, 1341, 1570, 1949, 2435
AcuI CTGAAG 3 cut(s) 284, 686, 911
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 6 cut(s) 181, 1177, 1719, 1998, 2043, 2802
AfiI CCNNNNNNNGG 6 cut(s) 639, 755, 917, 1194, 2302, 2648
AflIII ACRYGT 2 cut(s) 531, 2657
AjnI CCWGG 5 cut(s) 754, 933, 1511, 2566, 2608
AjuI GAANNNNNNNTTGG 4 cut(s) 2300, 2332, 2757, 2789
Alw21I GWGCWC 1 cut(s) 2488
Alw26I GTCTC 4 cut(s) 293, 711, 1092, 2812
AlwI GGATC 7 cut(s) 945, 1033, 1227, 1240, 1613, 1935, 2260
AlwNI CAGNNNCTG 1 cut(s) 934
Ama87I CYCGRG 2 cut(s) 683, 2261
AoxI GGCC 8 cut(s) 610, 673, 1128, 1372, 1813, 1991, 2304, 2540
ApeKI GCWGC 4 cut(s) 213, 249, 1291, 2507
ApoI RAATTY 9 cut(s) 429, 523, 905, 953, 973, 1341, 1570, 1949, 2435
ArsI GACNNNNNNTTYG 2 cut(s) 2761, 2793
AseI ATTAAT 1 cut(s) 1182
Asp700I GAANNNNTTC 3 cut(s) 357, 1520, 2599
AspLEI GCGC 2 cut(s) 748, 1962
AspS9I GGNCC 9 cut(s) 610, 674, 1034, 1128, 1328, 1423, 1886, 2371, 2540
AsuC2I CCSGG 1 cut(s) 1563
AsuHPI GGTGA 6 cut(s) 1021, 1796, 2048, 2209, 2209, 2568
AvaI CYCGRG 2 cut(s) 683, 2261
AvaII GGWCC 5 cut(s) 1034, 1328, 1423, 1886, 2371
AxyI CCTNAGG 1 cut(s) 638
BalI TGGCCA 1 cut(s) 2306
BamHI GGATCC 1 cut(s) 1232
BauI CACGAG 2 cut(s) 125, 2233
BbsI GAAGAC 1 cut(s) 1347
Bbv12I GWGCWC 1 cut(s) 2488
BbvCI CCTCAGC 1 cut(s) 2757
BbvI GCAGC 4 cut(s) 225, 261, 1278, 2519
BceAI ACGGC 1 cut(s) 201
BcgI CGANNNNNNTGC 2 cut(s) 674, 708
BciT130I CCWGG 5 cut(s) 756, 935, 1513, 2568, 2610
BciVI GTATCC 2 cut(s) 509, 2466
BclI TGATCA 2 cut(s) 33, 717
BcnI CCSGG 1 cut(s) 1563
BcoDI GTCTC 4 cut(s) 293, 711, 1092, 2812
BfaI CTAG 5 cut(s) 1301, 1787, 2082, 2360, 2762
BfuI GTATCC 2 cut(s) 509, 2466
BglII AGATCT 3 cut(s) 834, 1303, 1854
BisI GCNGC 4 cut(s) 214, 250, 1292, 2508
BlpI GCTNAGC 1 cut(s) 696
BlsI GCNGC 4 cut(s) 215, 251, 1293, 2509
BmcAI AGTACT 3 cut(s) 181, 1719, 2043
Bme1390I CCNGG 6 cut(s) 756, 935, 1513, 1563, 2568, 2610
Bme18I GGWCC 5 cut(s) 1034, 1328, 1423, 1886, 2371
BmeT110I CYCGRG 2 cut(s) 683, 2261
BmgT120I GGNCC 9 cut(s) 610, 674, 1034, 1128, 1328, 1423, 1886, 2371, 2540
BmiI GGNNCC 5 cut(s) 611, 895, 1129, 1234, 2541
BmrFI CCNGG 6 cut(s) 756, 935, 1513, 1563, 2568, 2610
BmrI ACTGGG 1 cut(s) 1840
BmsI GCATC 2 cut(s) 2083, 2494
BmuI ACTGGG 1 cut(s) 1840
BpiI GAAGAC 1 cut(s) 1347
BpmI CTGGAG 2 cut(s) 1216, 1495
Bpu10I CCTNAGC 1 cut(s) 2757
Bpu1102I GCTNAGC 1 cut(s) 696
BpuEI CTTGAG 4 cut(s) 409, 472, 667, 1661
BpuMI CCSGG 1 cut(s) 1563
BsaBI GATNNNNATC 2 cut(s) 921, 2675
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 7 cut(s) 911, 1864, 2262, 2367, 2518, 2566, 2567
BsaWI WCCGGW 2 cut(s) 1031, 2407
BsaXI ACNNNNNCTCC 2 cut(s) 1462, 1492
Bsc4I CCNNNNNNNGG 6 cut(s) 639, 755, 917, 1194, 2302, 2648
Bse118I RCCGGY 2 cut(s) 1815, 1993
Bse1I ACTGG 6 cut(s) 76, 749, 1199, 1774, 1846, 2819
Bse21I CCTNAGG 1 cut(s) 638
Bse3DI GCAATG 3 cut(s) 1301, 1331, 1707
Bse8I GATNNNNATC 2 cut(s) 921, 2675
BseBI CCWGG 5 cut(s) 756, 935, 1513, 2568, 2610
BseDI CCNNGG 7 cut(s) 911, 1864, 2262, 2367, 2518, 2566, 2567
BseGI GGATG 6 cut(s) 57, 145, 362, 922, 1913, 1973
BseJI GATNNNNATC 2 cut(s) 921, 2675
BseLI CCNNNNNNNGG 6 cut(s) 639, 755, 917, 1194, 2302, 2648
BseMI GCAATG 3 cut(s) 1301, 1331, 1707
BseMII CTCAG 7 cut(s) 652, 1272, 1498, 2342, 2356, 2381, 2771
BseNI ACTGG 6 cut(s) 76, 749, 1199, 1774, 1846, 2819
BseRI GAGGAG 1 cut(s) 469
BseXI GCAGC 4 cut(s) 225, 261, 1278, 2519
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 2 cut(s) 1825, 2346
Bsh1236I CGCG 1 cut(s) 368
Bsh1285I CGRYCG 1 cut(s) 372
BshFI GGCC 8 cut(s) 612, 675, 1130, 1374, 1815, 1993, 2306, 2542
BsiEI CGRYCG 1 cut(s) 372
BsiHKAI GWGCWC 1 cut(s) 2488
BsiHKCI CYCGRG 2 cut(s) 683, 2261
BsiSI CCGG 5 cut(s) 1032, 1563, 1816, 1994, 2408
BslFI GGGAC 1 cut(s) 673
BslI CCNNNNNNNGG 6 cut(s) 639, 755, 917, 1194, 2302, 2648
BsmAI GTCTC 4 cut(s) 293, 711, 1092, 2812
BsmBI CGTCTC 1 cut(s) 2812
BsmFI GGGAC 1 cut(s) 673
BsmI GAATGC 1 cut(s) 178
BsnI GGCC 8 cut(s) 612, 675, 1130, 1374, 1815, 1993, 2306, 2542
BsoBI CYCGRG 2 cut(s) 683, 2261
Bsp1286I GDGCHC 1 cut(s) 2488
Bsp1407I TGTACA 1 cut(s) 2800
Bsp1720I GCTNAGC 1 cut(s) 696
BspACI CCGC 4 cut(s) 326, 366, 2394, 2481
BspANI GGCC 8 cut(s) 612, 675, 1130, 1374, 1815, 1993, 2306, 2542
BspCNI CTCAG 7 cut(s) 651, 1271, 1497, 2343, 2355, 2382, 2770
BspFNI CGCG 1 cut(s) 368
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 5 cut(s) 611, 895, 1129, 1234, 2541
BspPI GGATC 7 cut(s) 945, 1033, 1227, 1240, 1613, 1935, 2260
BsrBI CCGCTC 1 cut(s) 2394
BsrDI GCAATG 3 cut(s) 1301, 1331, 1707
BsrFI RCCGGY 2 cut(s) 1815, 1993
BsrGI TGTACA 1 cut(s) 2800
BsrI ACTGG 6 cut(s) 76, 749, 1199, 1774, 1846, 2819
BssAI RCCGGY 2 cut(s) 1815, 1993
BssECI CCNNGG 7 cut(s) 911, 1864, 2262, 2367, 2518, 2566, 2567
BssNI GRCGYC 1 cut(s) 204
BssSI CACGAG 2 cut(s) 125, 2233
BssT1I CCWWGG 4 cut(s) 911, 1864, 2367, 2518
Bst2BI CACGAG 2 cut(s) 125, 2233
Bst2UI CCWGG 5 cut(s) 756, 935, 1513, 2568, 2610
Bst4CI ACNGT 1 cut(s) 787
Bst6I CTCTTC 2 cut(s) 296, 1281
BstACI GRCGYC 1 cut(s) 204
BstAUI TGTACA 1 cut(s) 2800
BstC8I GCNNGC 1 cut(s) 2070
BstEII GGTNACC 1 cut(s) 2167
BstF5I GGATG 6 cut(s) 57, 145, 362, 922, 1913, 1973
BstFNI CGCG 1 cut(s) 368
BstHHI GCGC 2 cut(s) 748, 1962
BstMAI GTCTC 4 cut(s) 293, 711, 1092, 2812
BstMCI CGRYCG 1 cut(s) 372
BstMWI GCNNNNNNNGC 3 cut(s) 210, 1297, 2312
BstNI CCWGG 5 cut(s) 756, 935, 1513, 2568, 2610
BstNSI RCATGY 5 cut(s) 535, 655, 2661, 2740, 2795
BstPI GGTNACC 1 cut(s) 2167
BstSCI CCNGG 6 cut(s) 754, 933, 1511, 1561, 2566, 2608
BstUI CGCG 1 cut(s) 368
BstV1I GCAGC 4 cut(s) 225, 261, 1278, 2519
BstV2I GAAGAC 1 cut(s) 1347
BstX2I RGATCY 5 cut(s) 834, 937, 1232, 1303, 1854
BstXI CCANNNNNNTGG 4 cut(s) 494, 890, 1138, 1445
BstYI RGATCY 5 cut(s) 834, 937, 1232, 1303, 1854
Bsu36I CCTNAGG 1 cut(s) 638
BsuI GTATCC 2 cut(s) 509, 2466
BsuRI GGCC 8 cut(s) 612, 675, 1130, 1374, 1815, 1993, 2306, 2542
BtgZI GCGATG 1 cut(s) 2087
BtsCI GGATG 6 cut(s) 57, 145, 362, 922, 1913, 1973
BtsIMutI CAGTG 4 cut(s) 83, 720, 1129, 1801
Cac8I GCNNGC 1 cut(s) 2070
CaiI CAGNNNCTG 1 cut(s) 934
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 2 cut(s) 748, 1962
Cfr10I RCCGGY 2 cut(s) 1815, 1993
Cfr13I GGNCC 9 cut(s) 610, 674, 1034, 1128, 1328, 1423, 1886, 2371, 2540
CpoI CGGWCCG 1 cut(s) 1034
CseI GACGC 1 cut(s) 193
Csp6I GTAC 6 cut(s) 180, 1176, 1718, 1997, 2042, 2801
CspCI CAANNNNNGTGG 2 cut(s) 2014, 2049
CspI CGGWCCG 1 cut(s) 1034
CviAII CATG 9 cut(s) 532, 652, 815, 1016, 1896, 2615, 2658, 2737, 2792
CviQI GTAC 6 cut(s) 180, 1176, 1718, 1997, 2042, 2801
EaeI YGGCCR 2 cut(s) 1991, 2304
Eam1104I CTCTTC 2 cut(s) 296, 1281
EarI CTCTTC 2 cut(s) 296, 1281
EciI GGCGGA 1 cut(s) 341
Eco130I CCWWGG 4 cut(s) 911, 1864, 2367, 2518
Eco47I GGWCC 5 cut(s) 1034, 1328, 1423, 1886, 2371
Eco57I CTGAAG 3 cut(s) 284, 686, 911
Eco81I CCTNAGG 1 cut(s) 638
Eco88I CYCGRG 2 cut(s) 683, 2261
Eco91I GGTNACC 1 cut(s) 2167
EcoO109I RGGNCCY 2 cut(s) 674, 2540
EcoO65I GGTNACC 1 cut(s) 2167
EcoRI GAATTC 2 cut(s) 905, 2435
EcoRII CCWGG 5 cut(s) 754, 933, 1511, 2566, 2608
EcoT14I CCWWGG 4 cut(s) 911, 1864, 2367, 2518
ErhI CCWWGG 4 cut(s) 911, 1864, 2367, 2518
Esp3I CGTCTC 1 cut(s) 2812
FaeI CATG 9 cut(s) 535, 655, 818, 1019, 1899, 2618, 2661, 2740, 2795
FaqI GGGAC 1 cut(s) 673
FatI CATG 9 cut(s) 531, 651, 814, 1015, 1895, 2614, 2657, 2736, 2791
FbaI TGATCA 2 cut(s) 33, 717
Fnu4HI GCNGC 4 cut(s) 214, 250, 1292, 2508
FokI GGATG 6 cut(s) 44, 132, 349, 929, 1900, 1980
Fsp4HI GCNGC 4 cut(s) 214, 250, 1292, 2508
FspBI CTAG 5 cut(s) 1301, 1787, 2082, 2360, 2762
GlaI GCGC 2 cut(s) 747, 1961
GluI GCNGC 4 cut(s) 214, 250, 1292, 2508
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 2 cut(s) 1216, 1495
HaeIII GGCC 8 cut(s) 612, 675, 1130, 1374, 1815, 1993, 2306, 2542
HapII CCGG 5 cut(s) 1032, 1563, 1816, 1994, 2408
HgaI GACGC 1 cut(s) 193
HhaI GCGC 2 cut(s) 748, 1962
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 9 cut(s) 535, 655, 818, 1019, 1899, 2618, 2661, 2740, 2795
Hin6I GCGC 2 cut(s) 746, 1960
HinP1I GCGC 2 cut(s) 746, 1960
HincII GTYRAC 1 cut(s) 1837
HindII GTYRAC 1 cut(s) 1837
HindIII AAGCTT 3 cut(s) 158, 698, 1709
HpaII CCGG 5 cut(s) 1032, 1563, 1816, 1994, 2408
HphI GGTGA 6 cut(s) 1021, 1796, 2048, 2209, 2209, 2568
Hpy166II GTNNAC 5 cut(s) 70, 541, 1029, 1837, 2655
Hpy188I TCNGA 5 cut(s) 374, 592, 874, 1408, 1432
Hpy8I GTNNAC 5 cut(s) 70, 541, 1029, 1837, 2655
HpyAV CCTTC 9 cut(s) 35, 159, 638, 858, 1097, 1817, 2126, 2524, 2585
HpyCH4III ACNGT 1 cut(s) 787
HpyCH4IV ACGT 3 cut(s) 243, 1680, 2821
HpyF10VI GCNNNNNNNGC 3 cut(s) 210, 1297, 2312
HpySE526I ACGT 3 cut(s) 243, 1680, 2821
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 9 cut(s) 535, 655, 818, 1019, 1899, 2618, 2661, 2740, 2795
HspAI GCGC 2 cut(s) 746, 1960
Ksp22I TGATCA 2 cut(s) 33, 717
LmnI GCTCC 3 cut(s) 111, 2191, 2410
Lsp1109I GCAGC 4 cut(s) 225, 261, 1278, 2519
LweI GCATC 2 cut(s) 2083, 2494
MaeI CTAG 5 cut(s) 1301, 1787, 2082, 2360, 2762
MaeII ACGT 3 cut(s) 243, 1680, 2821
MaeIII GTNAC 8 cut(s) 205, 843, 1091, 1970, 2167, 2345, 2522, 2682
MbiI CCGCTC 1 cut(s) 2394
MfeI CAATTG 2 cut(s) 802, 1067
MflI RGATCY 5 cut(s) 834, 937, 1232, 1303, 1854
MhlI GDGCHC 1 cut(s) 2488
MlsI TGGCCA 1 cut(s) 2306
MluNI TGGCCA 1 cut(s) 2306
MlyI GAGTC 4 cut(s) 695, 2135, 2362, 2372
MmeI TCCRAC 3 cut(s) 441, 705, 1080
Mox20I TGGCCA 1 cut(s) 2306
MroXI GAANNNNTTC 3 cut(s) 357, 1520, 2599
MscI TGGCCA 1 cut(s) 2306
MslI CAYNNNNRTG 2 cut(s) 1894, 2796
Msp20I TGGCCA 1 cut(s) 2306
MspI CCGG 5 cut(s) 1032, 1563, 1816, 1994, 2408
MspR9I CCNGG 6 cut(s) 756, 935, 1513, 1563, 2568, 2610
MunI CAATTG 2 cut(s) 802, 1067
Mva1269I GAATGC 1 cut(s) 178
MvaI CCWGG 5 cut(s) 756, 935, 1513, 2568, 2610
MvnI CGCG 1 cut(s) 368
MwoI GCNNNNNNNGC 3 cut(s) 210, 1297, 2312
NciI CCSGG 1 cut(s) 1563
NlaIII CATG 9 cut(s) 535, 655, 818, 1019, 1899, 2618, 2661, 2740, 2795
NlaIV GGNNCC 5 cut(s) 611, 895, 1129, 1234, 2541
NmeAIII GCCGAG 1 cut(s) 638
NmuCI GTSAC 3 cut(s) 205, 1970, 2682
NspI RCATGY 5 cut(s) 535, 655, 2661, 2740, 2795
PaeR7I CTCGAG 1 cut(s) 683
PagI TCATGA 1 cut(s) 1015
PasI CCCWGGG 1 cut(s) 2567
PciI ACATGT 2 cut(s) 531, 2657
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 1 cut(s) 178
PdmI GAANNNNTTC 3 cut(s) 357, 1520, 2599
PfeI GAWTC 6 cut(s) 137, 353, 759, 793, 1616, 2443
PflFI GACNNNGTC 1 cut(s) 2775
PflMI CCANNNNNTGG 2 cut(s) 917, 1194
PfoI TCCNGGA 3 cut(s) 754, 1511, 2608
PkrI GCNGC 4 cut(s) 215, 251, 1293, 2509
Ple19I CGATCG 1 cut(s) 372
PleI GAGTC 4 cut(s) 694, 2134, 2361, 2371
PpsI GAGTC 4 cut(s) 694, 2134, 2361, 2371
PscI ACATGT 2 cut(s) 531, 2657
PshBI ATTAAT 1 cut(s) 1182
Psp1406I AACGTT 1 cut(s) 1680
Psp6I CCWGG 5 cut(s) 754, 933, 1511, 2566, 2608
PspEI GGTNACC 1 cut(s) 2167
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 5 cut(s) 754, 933, 1511, 2566, 2608
PspN4I GGNNCC 5 cut(s) 611, 895, 1129, 1234, 2541
PspPI GGNCC 9 cut(s) 610, 674, 1034, 1128, 1328, 1423, 1886, 2371, 2540
PstNI CAGNNNCTG 1 cut(s) 934
PsuI RGATCY 5 cut(s) 834, 937, 1232, 1303, 1854
PsyI GACNNNGTC 1 cut(s) 2775
PvuI CGATCG 1 cut(s) 372
RsaI GTAC 6 cut(s) 181, 1177, 1719, 1998, 2043, 2802
RsaNI GTAC 6 cut(s) 180, 1176, 1718, 1997, 2042, 2801
RseI CAYNNNNRTG 2 cut(s) 1894, 2796
Rsr2I CGGWCCG 1 cut(s) 1034
RsrII CGGWCCG 1 cut(s) 1034
SatI GCNGC 4 cut(s) 214, 250, 1292, 2508
Sau96I GGNCC 9 cut(s) 610, 674, 1034, 1128, 1328, 1423, 1886, 2371, 2540
ScaI AGTACT 3 cut(s) 181, 1719, 2043
SchI GAGTC 4 cut(s) 695, 2135, 2362, 2372
ScrFI CCNGG 6 cut(s) 756, 935, 1513, 1563, 2568, 2610
SduI GDGCHC 1 cut(s) 2488
SfaNI GCATC 2 cut(s) 2083, 2494
Sfr274I CTCGAG 1 cut(s) 683
SinI GGWCC 5 cut(s) 1034, 1328, 1423, 1886, 2371
SlaI CTCGAG 1 cut(s) 683
SmiMI CAYNNNNRTG 2 cut(s) 1894, 2796
SmlI CTYRAG 5 cut(s) 388, 451, 646, 683, 1640
SmoI CTYRAG 5 cut(s) 388, 451, 646, 683, 1640
SsiI CCGC 4 cut(s) 326, 366, 2394, 2481
SspI AATATT 1 cut(s) 511
SspMI CTAG 5 cut(s) 1301, 1787, 2082, 2360, 2762
StyD4I CCNGG 6 cut(s) 754, 933, 1511, 1561, 2566, 2608
StyI CCWWGG 4 cut(s) 911, 1864, 2367, 2518
TaaI ACNGT 1 cut(s) 787
TaiI ACGT 3 cut(s) 246, 1683, 2824
TaqI TCGA 8 cut(s) 438, 471, 684, 1082, 1245, 1383, 1586, 2378
TaqII GACCGA 1 cut(s) 1051
TatI WGTACW 4 cut(s) 179, 1717, 2041, 2800
TfiI GAWTC 6 cut(s) 137, 353, 759, 793, 1616, 2443
TscAI CASTG 4 cut(s) 83, 720, 1129, 1801
TseFI GTSAC 3 cut(s) 205, 1970, 2682
TseI GCWGC 4 cut(s) 213, 249, 1291, 2507
Tsp45I GTSAC 3 cut(s) 205, 1970, 2682
TspDTI ATGAA 2 cut(s) 17, 1004
TspGWI ACGGA 3 cut(s) 1104, 2116, 2265
TspRI CASTG 4 cut(s) 83, 720, 1129, 1801
Tth111I GACNNNGTC 1 cut(s) 2775
Van91I CCANNNNNTGG 2 cut(s) 917, 1194
VpaK11BI GGWCC 5 cut(s) 1034, 1328, 1423, 1886, 2371
VspI ATTAAT 1 cut(s) 1182
XapI RAATTY 9 cut(s) 429, 523, 905, 953, 973, 1341, 1570, 1949, 2435
XbaI TCTAGA 1 cut(s) 1786
XceI RCATGY 5 cut(s) 535, 655, 2661, 2740, 2795
XcmI CCANNNNNNNNNTGG 1 cut(s) 2606
XhoI CTCGAG 1 cut(s) 683
XmnI GAANNNNTTC 3 cut(s) 357, 1520, 2599
XspI CTAG 5 cut(s) 1301, 1787, 2082, 2360, 2762
ZrmI AGTACT 3 cut(s) 181, 1719, 2043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.