MD12G1173600.v1.1

receptor-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
25378740 .. 25381306
2567 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1173600.v1.1.491

Sequence Viewer

Length: 2454 bp
ATGCTCTTTCTGAACCTCACAGAGATTTGTGAGCTCTATCTTGATGGGATAAATATATCAGCACAGGGAACTCAGTGGTGCCAAGCATTATCATCTTCACTCCTACACCTGAGGGTGTTGAGCATGTCTGGAAGCCAGCTCTCAGGTCCTTTTTGTCAGTCCTTCGCAAAACTTCAGTCTCTCTCGGTGATTCAATTGGATAATAATGACATCTCCGGTCCAATTCCAGGATTCTTCGCCAAGTTTACAAATCTGACAGTGTTGAGCTTGAATAATAACAACATTGCTGCTATGGTTCCAAGATTGTTTGCCAACTTTTCAAAGTTGACTGCTTTGAGTCTTCAAAATTGCAATCTTAATGGAACATTACCCAAAGAGATCTTCCAGGTACCTACTTTACAAACTGTTGACCTTTCGCATAATCTACAGCTTCATGGTTCCCTGCCTGAATTTCCTGAGAATGCATCTCTTCAATTTTTGGACCTAAGCTTCACAAAAGTTTCAGGGTTATTGCCGGACTCTATCGGCAACCTCAAAATGTTGTCCTTTTTAAATCTTTTCAATTGCAGTTTCAGTGGATCAATCCCAAAGTCCATGGCAAGCCTAACAGAATTGGTTTATTTGGACATGTCATCAAATATGTTTAATGGTTCGATTGATTCCATTTACTGGGGAAACCATGTTAGTCTCCAATCTTTATTTTTGGAGTCAAATTTACTCACTGGTACTATCCCGTCATCTATCTTTTCTCCTCCCCCTTTGCTGGTACTGACACTTTCCCACAACCGATTCTCTGGTCAACTCCATGAATGTTCTAATGTCTCGTCCCAGTTATCTTTGCTAGATTTGAGTTCCAACAATTTGGAAGGACCAATACCTGCCTCTATATCTAATTTTCAAGAGCTTGCATATCTTCGTCTTTCTTCAAACCATTTCAATTCGTTTCCTTCCAATGGTCATCCTTGTCAATTTGAAGAGTTGTATTTGGCTTTTAACAATTTGAGAGCAGTCCCAGATATCTTGAGATATCAAACCAGCATAAGAAGATTGGACCTTTCAGGTAACCAGATTCAAAAAGTACCCAATTGGTTTTGGAGCCTCCATTTGCTCGATTACCTAAATCTTTCTTCCAACTACTTGGTAACTCTAGCAGTTCCTTTTAACTATACAAAGGAATTCTCCACACTTGACCTTCATTCTAACCAACTCAAGGGGTCCATCCCACTATTGCATGCCAATTATCTGGATTACTCAAGCAATCATTTCACTTCTATACCGACTAACATTGGTGATTTCCTCAATCCCTCCACTAAGTTCTTATCTATTTCGAGCAATGATTTGCATGGGCTCATTCCATCATCAATATGCAATGTAATTCCTTTGGTAATTCTTGATTTGTCCATTATTTCTCTGAGTGGTACGATTCCCCAATGCTTGTCTGCTATGAGCCACCTTGAAGTGCTTAACTTGAGGCGAAACAATCTTACTGGAAGTTGTAAACCTCGGAAACAACTAGATAACAGATACCTTTACATGCTTGTTGAGGAACATCCCACCTTGCGTGTCCTTAGTTTGCGGTCCAACAAACTTTATGGACGCATTGGATGTCCCGACGAGAGCTATGGAACGTGGCCAGTGCTACAAATCATAGACGTAGCTCACAACAATTTTCATGGAGAAATACCAGGAAGGTATTTGAAAACCTGGCAGGCAATGATAAATAACGAAGGTGATGACCCGTCAGCAGTCCACGAGCTTTATTCTGAAGATAGTAGTTTGAATGGTTATCATCAGACAATAACAGTCATAAGGAAAGGTTTTGAAGTCGAACTGGTAAAGATTCTAACTATCTTCACCACCATTGACTTCTCTTGCAACAATTTTAGCGGACCAATTCCTAAGGAAATGGGAGAATTCAAATCACTATATTTCCTCAACTTGTCAAGTAATGCTTTTACTGGTGAAATCCCATCGTCATTTGGCAAAATGAGACAACTCGAGACCTTAGACCTGTCGCAAAACAAGCTGAGGGGGAATATTCCATTGCAGTTGGCAAACCTTACTTTCCTTTCATTCTTGAACCTCTCAAATAATCAATTGGTTGGCAGGATCCCAACCGGTCCTCAGTTTTCAACATTTACAAGTGCATCATTTACAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGTAGATAGCTTGTCACCACCACCAACATTGACTGGGAGTGTTCCGAGTTCTGGAAATGAGATTGATTGGGGTCTTATCAATGTTGAAATTGGATTTGTATATGGCTTTGGAGTTGCAGTCGGGTCACTTGTATTATGCAAGAGATGGAGTAAATGGTATTACAAAACAATGTATAAAATCTTTGTAAAGATATTCCCTCATCTTGAAGATAGAATTGGTCCTCACCGAAGACATGTCCACATAAATCAAAGGTTGGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

818

Amino Acids

91.04

Weight (kDa)

6.54

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 76 - 119 3.5e-06 Leucine rich repeat
LRR_14 PF23598 153 - 375 5.6e-06 Leucine-rich repeat region
LRR_8 PF13855 325 - 380 1.1e-09 Leucine rich repeat
LRR_8 PF13855 641 - 700 3.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 886
Acc65I GGTACC 1 cut(s) 388
AccB1I GGYRCC 2 cut(s) 78, 388
AccB7I CCANNNNNTGG 1 cut(s) 669
AciI CCGC 2 cut(s) 1576, 1887
AclWI GGATC 3 cut(s) 586, 2104, 2117
AcoI YGGCCR 1 cut(s) 1631
AcsI RAATTY 4 cut(s) 449, 712, 1175, 1913
AcuI CTGAAG 2 cut(s) 158, 1785
AfaI GTAC 5 cut(s) 390, 727, 768, 1080, 1420
AfiI CCNNNNNNNGG 6 cut(s) 227, 669, 763, 953, 1210, 2240
AflIII ACRYGT 2 cut(s) 627, 2422
AgeI ACCGGT 1 cut(s) 2117
AjnI CCWGG 4 cut(s) 226, 384, 1684, 1703
AjuI GAANNNNNNNTTGG 4 cut(s) 365, 397, 2388, 2420
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 5 cut(s) 183, 692, 826, 1984, 1994
AlwI GGATC 3 cut(s) 586, 2104, 2117
Ama87I CYCGRG 1 cut(s) 1997
AoxI GGCC 2 cut(s) 1631, 2177
ApeKI GCWGC 1 cut(s) 287
ApoI RAATTY 4 cut(s) 449, 712, 1175, 1913
ArsI GACNNNNNNTTYG 2 cut(s) 161, 193
AsiGI ACCGGT 1 cut(s) 2117
Asp718I GGTACC 1 cut(s) 388
AsuHPI GGTGA 7 cut(s) 199, 1301, 1742, 1846, 1973, 2196, 2405
AvaI CYCGRG 1 cut(s) 1997
AxyI CCTNAGG 2 cut(s) 110, 1899
BalI TGGCCA 1 cut(s) 1633
BamHI GGATCC 1 cut(s) 2109
BanI GGYRCC 2 cut(s) 78, 388
BanII GRGCYC 2 cut(s) 36, 1350
BarI GAAGNNNNNNTAC 2 cut(s) 858, 890
BauI CACGAG 1 cut(s) 1751
BbsI GAAGAC 2 cut(s) 332, 2425
Bbv12I GWGCWC 1 cut(s) 36
BbvCI CCTCAGC 1 cut(s) 2027
BbvI GCAGC 1 cut(s) 274
BccI CCATC 5 cut(s) 38, 1226, 1363, 1978, 2328
BciT130I CCWGG 4 cut(s) 228, 386, 1686, 1705
BcoDI GTCTC 5 cut(s) 183, 692, 826, 1984, 1994
BfaI CTAG 3 cut(s) 842, 1148, 1514
BfmI CTRYAG 1 cut(s) 425
BfuAI ACCTGC 1 cut(s) 886
BglII AGATCT 1 cut(s) 378
BisI GCNGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 289
Bme1390I CCNGG 4 cut(s) 228, 386, 1686, 1705
BmeT110I CYCGRG 1 cut(s) 1997
BmiI GGNNCC 8 cut(s) 80, 297, 390, 439, 1097, 1216, 2111, 2178
BmrFI CCNGG 4 cut(s) 228, 386, 1686, 1705
BmrI ACTGGG 3 cut(s) 679, 823, 2232
BmsI GCATC 2 cut(s) 473, 2156
BmuI ACTGGG 3 cut(s) 679, 823, 2232
BpiI GAAGAC 2 cut(s) 332, 2425
Bpu10I CCTNAGC 2 cut(s) 485, 2027
BpuEI CTTGAG 4 cut(s) 1042, 1193, 1237, 1489
BsaI GGTCTC 1 cut(s) 1994
BsaJI CCNNGG 2 cut(s) 594, 1502
BsaWI WCCGGW 2 cut(s) 215, 2117
BsaXI ACNNNNNCTCC 2 cut(s) 2292, 2322
Bsc4I CCNNNNNNNGG 6 cut(s) 227, 669, 763, 953, 1210, 2240
Bse118I RCCGGY 1 cut(s) 2117
Bse1I ACTGG 8 cut(s) 674, 727, 829, 1492, 1634, 1836, 1963, 2227
Bse21I CCTNAGG 2 cut(s) 110, 1899
Bse3DI GCAATG 5 cut(s) 282, 1339, 1375, 1719, 2042
BseBI CCWGG 4 cut(s) 228, 386, 1686, 1705
BseDI CCNNGG 2 cut(s) 594, 1502
BseGI GGATG 4 cut(s) 958, 1218, 1549, 1610
BseLI CCNNNNNNNGG 6 cut(s) 227, 669, 763, 953, 1210, 2240
BseMI GCAATG 5 cut(s) 282, 1339, 1375, 1719, 2042
BseMII CTCAG 7 cut(s) 86, 101, 156, 447, 1403, 2018, 2138
BseNI ACTGG 8 cut(s) 674, 727, 829, 1492, 1634, 1836, 1963, 2227
BseRI GAGGAG 1 cut(s) 741
BseXI GCAGC 1 cut(s) 274
BshFI GGCC 2 cut(s) 1633, 2179
BshNI GGYRCC 2 cut(s) 78, 388
BshTI ACCGGT 1 cut(s) 2117
BsiHKAI GWGCWC 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 1997
BsiSI CCGG 3 cut(s) 216, 515, 2118
BslFI GGGAC 3 cut(s) 811, 995, 1593
BslI CCNNNNNNNGG 6 cut(s) 227, 669, 763, 953, 1210, 2240
BsmAI GTCTC 5 cut(s) 183, 692, 826, 1984, 1994
BsmFI GGGAC 3 cut(s) 811, 995, 1593
BsmI GAATGC 1 cut(s) 466
BsnI GGCC 2 cut(s) 1633, 2179
Bso31I GGTCTC 1 cut(s) 1994
BsoBI CYCGRG 1 cut(s) 1997
Bsp1286I GDGCHC 2 cut(s) 36, 1350
Bsp143I GATC 3 cut(s) 378, 578, 2109
Bsp19I CCATGG 1 cut(s) 594
BspACI CCGC 2 cut(s) 1576, 1887
BspANI GGCC 2 cut(s) 1633, 2179
BspCNI CTCAG 7 cut(s) 85, 102, 155, 448, 1404, 2019, 2137
BspLI GGNNCC 8 cut(s) 80, 297, 390, 439, 1097, 1216, 2111, 2178
BspMI ACCTGC 1 cut(s) 886
BspPI GGATC 3 cut(s) 586, 2104, 2117
BspT107I GGYRCC 2 cut(s) 78, 388
BspTNI GGTCTC 1 cut(s) 1994
BsrDI GCAATG 5 cut(s) 282, 1339, 1375, 1719, 2042
BsrFI RCCGGY 1 cut(s) 2117
BsrI ACTGG 8 cut(s) 674, 727, 829, 1492, 1634, 1836, 1963, 2227
BssAI RCCGGY 1 cut(s) 2117
BssECI CCNNGG 2 cut(s) 594, 1502
BssMI GATC 3 cut(s) 378, 578, 2109
BssSI CACGAG 1 cut(s) 1751
BssT1I CCWWGG 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 1751
Bst2UI CCWGG 4 cut(s) 228, 386, 1686, 1705
Bst4CI ACNGT 4 cut(s) 259, 406, 1804, 2191
Bst6I CTCTTC 2 cut(s) 474, 969
BstC8I GCNNGC 5 cut(s) 137, 601, 906, 1233, 1710
BstDSI CCRYGG 1 cut(s) 594
BstEII GGTNACC 1 cut(s) 1061
BstF5I GGATG 4 cut(s) 958, 1218, 1549, 1610
BstKTI GATC 3 cut(s) 381, 581, 2112
BstMAI GTCTC 5 cut(s) 183, 692, 826, 1984, 1994
BstMBI GATC 3 cut(s) 378, 578, 2109
BstMWI GCNNNNNNNGC 1 cut(s) 2023
BstNI CCWGG 4 cut(s) 228, 386, 1686, 1705
BstNSI RCATGY 5 cut(s) 127, 631, 1235, 1537, 2426
BstPI GGTNACC 1 cut(s) 1061
BstSCI CCNGG 4 cut(s) 226, 384, 1684, 1703
BstSFI CTRYAG 1 cut(s) 425
BstV1I GCAGC 1 cut(s) 274
BstV2I GAAGAC 2 cut(s) 332, 2425
BstX2I RGATCY 2 cut(s) 378, 2109
BstXI CCANNNNNNTGG 3 cut(s) 862, 1138, 1243
BstYI RGATCY 2 cut(s) 378, 2109
Bsu36I CCTNAGG 2 cut(s) 110, 1899
BsuRI GGCC 2 cut(s) 1633, 2179
BtgI CCRYGG 1 cut(s) 594
BtsCI GGATG 4 cut(s) 958, 1218, 1549, 1610
BtsIMutI CAGTG 5 cut(s) 80, 264, 580, 720, 1641
BveI ACCTGC 1 cut(s) 886
Cac8I GCNNGC 5 cut(s) 137, 601, 906, 1233, 1710
Cfr10I RCCGGY 1 cut(s) 2117
CseI GACGC 1 cut(s) 1605
Csp6I GTAC 5 cut(s) 389, 726, 767, 1079, 1419
CspAI ACCGGT 1 cut(s) 2117
CspCI CAANNNNNGTGG 2 cut(s) 2199, 2234
CviQI GTAC 5 cut(s) 389, 726, 767, 1079, 1419
DpnI GATC 3 cut(s) 380, 580, 2111
DpnII GATC 3 cut(s) 378, 578, 2109
DraI TTTAAA 1 cut(s) 552
EaeI YGGCCR 1 cut(s) 1631
Eam1104I CTCTTC 2 cut(s) 474, 969
EarI CTCTTC 2 cut(s) 474, 969
Ecl136II GAGCTC 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 2 cut(s) 36, 1350
Eco31I GGTCTC 1 cut(s) 1994
Eco32I GATATC 2 cut(s) 1018, 1028
Eco53kI GAGCTC 1 cut(s) 34
Eco57I CTGAAG 2 cut(s) 158, 1785
Eco81I CCTNAGG 2 cut(s) 110, 1899
Eco88I CYCGRG 1 cut(s) 1997
Eco91I GGTNACC 1 cut(s) 1061
EcoICRI GAGCTC 1 cut(s) 34
EcoO109I RGGNCCY 2 cut(s) 146, 2177
EcoO65I GGTNACC 1 cut(s) 1061
EcoRI GAATTC 2 cut(s) 1175, 1913
EcoRII CCWGG 4 cut(s) 226, 384, 1684, 1703
EcoRV GATATC 2 cut(s) 1018, 1028
EcoT14I CCWWGG 1 cut(s) 594
EcoT22I ATGCAT 1 cut(s) 466
EcoT38I GRGCYC 2 cut(s) 36, 1350
ErhI CCWWGG 1 cut(s) 594
FalI AAGNNNNNCTT 2 cut(s) 1936, 1968
FaqI GGGAC 3 cut(s) 811, 995, 1593
Fnu4HI GCNGC 1 cut(s) 288
FokI GGATG 4 cut(s) 945, 1205, 1536, 1617
FriOI GRGCYC 2 cut(s) 36, 1350
Fsp4HI GCNGC 1 cut(s) 288
FspBI CTAG 3 cut(s) 842, 1148, 1514
GluI GCNGC 1 cut(s) 288
HaeIII GGCC 2 cut(s) 1633, 2179
HapII CCGG 3 cut(s) 216, 515, 2118
HgaI GACGC 1 cut(s) 1605
HincII GTYRAC 3 cut(s) 327, 409, 800
HindII GTYRAC 3 cut(s) 327, 409, 800
HindIII AAGCTT 1 cut(s) 487
HpaII CCGG 3 cut(s) 216, 515, 2118
HphI GGTGA 7 cut(s) 199, 1301, 1742, 1846, 1973, 2196, 2405
Hpy166II GTNNAC 7 cut(s) 246, 327, 409, 800, 1499, 1750, 2428
Hpy188I TCNGA 7 cut(s) 12, 255, 1413, 1506, 1765, 1794, 2235
Hpy8I GTNNAC 7 cut(s) 246, 327, 409, 800, 1499, 1750, 2428
Hpy99I CGWCG 1 cut(s) 1616
HpyAV CCTTC 6 cut(s) 172, 860, 957, 1202, 1683, 1721
HpyCH4III ACNGT 4 cut(s) 259, 406, 1804, 2191
HpyCH4IV ACGT 2 cut(s) 1628, 1653
HpyF10VI GCNNNNNNNGC 1 cut(s) 2023
HpySE526I ACGT 2 cut(s) 1628, 1653
KpnI GGTACC 1 cut(s) 392
Kzo9I GATC 3 cut(s) 378, 578, 2109
LmnI GCTCC 1 cut(s) 1095
Lsp1109I GCAGC 1 cut(s) 274
LweI GCATC 2 cut(s) 473, 2156
MaeI CTAG 3 cut(s) 842, 1148, 1514
MaeII ACGT 2 cut(s) 1628, 1653
MaeIII GTNAC 5 cut(s) 1061, 1141, 2159, 2202, 2313
MalI GATC 3 cut(s) 380, 580, 2111
MboI GATC 3 cut(s) 378, 578, 2109
MfeI CAATTG 4 cut(s) 194, 562, 1084, 2096
MflI RGATCY 2 cut(s) 378, 2109
MhlI GDGCHC 2 cut(s) 36, 1350
MlsI TGGCCA 1 cut(s) 1633
MluNI TGGCCA 1 cut(s) 1633
MlyI GAGTC 3 cut(s) 346, 512, 716
MmeI TCCRAC 3 cut(s) 879, 1155, 1605
Mox20I TGGCCA 1 cut(s) 1633
Mph1103I ATGCAT 1 cut(s) 466
MscI TGGCCA 1 cut(s) 1633
MseI TTAA 7 cut(s) 357, 551, 645, 993, 1161, 1464, 2186
MslI CAYNNNNRTG 1 cut(s) 1363
Msp20I TGGCCA 1 cut(s) 1633
MspI CCGG 3 cut(s) 216, 515, 2118
MspR9I CCNGG 4 cut(s) 228, 386, 1686, 1705
MunI CAATTG 4 cut(s) 194, 562, 1084, 2096
Mva1269I GAATGC 1 cut(s) 466
MvaI CCWGG 4 cut(s) 228, 386, 1686, 1705
MwoI GCNNNNNNNGC 1 cut(s) 2023
NcoI CCATGG 1 cut(s) 594
NdeII GATC 3 cut(s) 378, 578, 2109
NlaIV GGNNCC 8 cut(s) 80, 297, 390, 439, 1097, 1216, 2111, 2178
NmuCI GTSAC 2 cut(s) 2202, 2313
NsiI ATGCAT 1 cut(s) 466
NspI RCATGY 5 cut(s) 127, 631, 1235, 1537, 2426
PaeI GCATGC 1 cut(s) 1235
PaeR7I CTCGAG 1 cut(s) 1997
PciI ACATGT 2 cut(s) 627, 2422
PctI GAATGC 1 cut(s) 466
PfeI GAWTC 7 cut(s) 190, 231, 659, 789, 1069, 1423, 1840
PflMI CCANNNNNTGG 1 cut(s) 669
PfoI TCCNGGA 1 cut(s) 226
PinAI ACCGGT 1 cut(s) 2117
PkrI GCNGC 1 cut(s) 289
PleI GAGTC 3 cut(s) 345, 512, 715
PpsI GAGTC 3 cut(s) 345, 512, 715
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 627, 2422
Psp124BI GAGCTC 1 cut(s) 36
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 4 cut(s) 226, 384, 1684, 1703
PspEI GGTNACC 1 cut(s) 1061
PspGI CCWGG 4 cut(s) 226, 384, 1684, 1703
PspN4I GGNNCC 8 cut(s) 80, 297, 390, 439, 1097, 1216, 2111, 2178
PspPPI RGGWCCY 1 cut(s) 146
PsuI RGATCY 2 cut(s) 378, 2109
RsaI GTAC 5 cut(s) 390, 727, 768, 1080, 1420
RsaNI GTAC 5 cut(s) 389, 726, 767, 1079, 1419
RseI CAYNNNNRTG 1 cut(s) 1363
SacI GAGCTC 1 cut(s) 36
SaqAI TTAA 7 cut(s) 357, 551, 645, 993, 1161, 1464, 2186
SatI GCNGC 1 cut(s) 288
Sau3AI GATC 3 cut(s) 378, 578, 2109
SchI GAGTC 3 cut(s) 346, 512, 716
ScrFI CCNGG 4 cut(s) 228, 386, 1686, 1705
SduI GDGCHC 2 cut(s) 36, 1350
SfaNI GCATC 2 cut(s) 473, 2156
SfcI CTRYAG 1 cut(s) 425
Sfr274I CTCGAG 1 cut(s) 1997
SlaI CTCGAG 1 cut(s) 1997
SmiMI CAYNNNNRTG 1 cut(s) 1363
SmlI CTYRAG 5 cut(s) 1021, 1208, 1252, 1468, 1997
SmoI CTYRAG 5 cut(s) 1021, 1208, 1252, 1468, 1997
SphI GCATGC 1 cut(s) 1235
SsiI CCGC 2 cut(s) 1576, 1887
SspI AATATT 1 cut(s) 2038
SspMI CTAG 3 cut(s) 842, 1148, 1514
SstI GAGCTC 1 cut(s) 36
StyD4I CCNGG 4 cut(s) 226, 384, 1684, 1703
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 4 cut(s) 259, 406, 1804, 2191
TaiI ACGT 2 cut(s) 1631, 1656
TaqI TCGA 5 cut(s) 653, 1110, 1328, 1827, 1998
TfiI GAWTC 7 cut(s) 190, 231, 659, 789, 1069, 1423, 1840
Tru1I TTAA 7 cut(s) 357, 551, 645, 993, 1161, 1464, 2186
Tru9I TTAA 7 cut(s) 357, 551, 645, 993, 1161, 1464, 2186
TscAI CASTG 5 cut(s) 80, 264, 580, 727, 1641
TseFI GTSAC 2 cut(s) 2202, 2313
TseI GCWGC 1 cut(s) 287
Tsp45I GTSAC 2 cut(s) 2202, 2313
TspDTI ATGAA 5 cut(s) 422, 822, 1184, 1661, 2061
TspRI CASTG 5 cut(s) 80, 264, 580, 727, 1641
Van91I CCANNNNNTGG 1 cut(s) 669
XapI RAATTY 4 cut(s) 449, 712, 1175, 1913
XceI RCATGY 5 cut(s) 127, 631, 1235, 1537, 2426
XhoI CTCGAG 1 cut(s) 1997
XspI CTAG 3 cut(s) 842, 1148, 1514
Zsp2I ATGCAT 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.