RLG00000030682

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000047
Physical Location & Seq
Reverse (-)
65883846 .. 65887700
3855 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030682

Sequence Viewer

Length: 2523 bp
ATGATAACTTTGTTCTTCAATTTCTTCCTCTTTTTGATCACTCCTTGTGTTACTAACCTCATCCCTACTGTTCACAGCAAAGGTATTGAAGCCCAAAAGGAATCATTGCTCAATTTCAAGAAAAGTCTTGTATTTAATTCTTCTTCTTCCTCCAAGCTCATAACATGGAATTCGAATACCGAATGCTGTACTTGGCCCGGAGTAACTTGCAGCACTAATGGGAGTGTTGTTGGACTTGACATCAGCAGCGAGTCTATCTCATGCAACATTGACAATTCCAGCAGTCTTTTCCAACTACTACATCTTCAGAGCCTCAATTTAGCCTATACCAACTTCAGTGGCTCTTCAATTCCATCTGCAATAGGAAAGCTTACAGAGTTGAGGTATCTGAATTTAAGCCCTATTCATGAATCATTTGCCAAGCTTGATTCTCTATCCACGTTAATATTGTATGGAAACAATATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGTTTGATTTCCTTGAGTCTGTCCGCTTGTAACTTGTATGGAGCATTTCCCAAAGAGATATTCCAGGTAGCTACACTACAGTCTGTTGACCTATCAGCTAATTCAGAGATTCATGGTTCCTTACCAGAATTTCTAAAGAATGGATCTCTCGAATCCCTAGTTCTATCTGGGACTAAGTTTTCAGGAGTCTTGCCAGACTCTGTTGGCAACCTTGAAATGCTGTCTAGATTATATCTTTCAGATTGCAATTTCACAGGGGCAGTTCCAAAGTCACTGGCAAACCTAACACAATTGAGGTTTTTGGCCTTGTCATCCAACAAGTTTTCTGGTTCGATTAATTATATTCAATGGGACAAACTCATCAAGCTTGAGCTTCTTGACTTGTCCAACAATCTTCTTTACAAGAGTATTCCATTGTCTCCCTTTTCTATTCCCTTGCTGCAGAAGTTAGTTCTTTCTGGAAATCACTTCTCTGGTCAGATTCAGGCCTTGACGTTGGCTTCTAACAAGTTGAAAACATTCCCAAGTTTCCTGAAAAGTCAATCTAGTTTAGCCTACTTGGACCTTTCAGACAACCAGATTCCAGGTCAGATACCCAATTGGATTTGGGGGCTTCGTCTCAAAATTCTAGGTCTCTGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACTTGGTTCTACTTACAGTCTGTTGTATATTGATCTTCACTCAAACCAGCTTCAGGGACAAATACCATTGTTTATAAGCGGTAGTTATTTGGATTACTCAAGAAATAATTTCAGCTCTAGTATACCAACTGATATTGGTGATTTCATTTCCTCCACGGCCTACCTTTCTCTATCAAGCAGTAACTTGTATGGGGAAATTCCAATATCAATATGCAATGCAAGTGGTATAGTTCTTGATCTCTCTTATAACTCTTTGAGTGGAATCATTCCCCAATGCTTGACTCAGACATCTTCGCTTAATGTCCTTGATTTGAGGAGAAATAACCTTACTGGATCTATCCCCGATACTTTTCTTCAAGGTTGTAATTTGCAAACTCTAGCTCTGAGCAGAAATCATATACAAGGTCGATTTCCAAAATCTCTAGCCAATTGTTCAAGCTTAGAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCCTGCATGTTGAAGACCATATCCACCTTGCGTGTCCTTGTGTTGCGATCCAACAAATTTTATGGACCCATTGGATGTCCTGAGACCAATGGCACCTGGCCGAAGCTTCAAATCATAGACTTAGCTCATAACAGTTTCAATGGTGAAATACCAGGTACATCATTGACAACATGGCAGGCAATGATGGTTAAAGAAGATGATTACCAAACTTACCCTAGCTTTTGGAGGGCAGCAGGTGGTGGAAGTGGCCTCGTTATTGATTATGTAGATGCAGTAACAACTACAAGCAAAGGTCTAGAGATGGATCTTGTACGTATTTCAACTATCTTCACTGCGATTGACTTCTCTGCTAACAAGTTCAATGGAACAATACCCAAGGAAATGGGTCTACTGAGATTATTATATGCCCTCAATCTGTCCAGTAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGAACCATCGAGACCTTAGACCTCTCACAAAACCACCTGAGCGGCCAAATTCCACCACAATTTGCAAATCTCACTTTCCTTTCGTACTTGAATGTCTCATATAATCAACTGACGGGAATGATCCCAAGCAGCACTCAGTTATCGACGTTTCCAAATAGCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAACAATCGTATTGCCACCTCCGACGTTAAATGGAAGCTCAACAATCAAGATGGAGTTAGAGAAGCCAAGTATTGGCTGCAAGCGAAGCAGTGATAGTGCCACTGACAAGAACCAGAAGGTTACTGTTGAATGGATGCATAAGCTGGACAAAAAGATCTTCCAACGGATTTATAAGCTGCCTGTGAAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

841

Amino Acids

91.85

Weight (kDa)

7.45

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 2.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 199 1.1e-06 Leucine-rich repeat region
LRR_14 PF23598 215 - 412 8.7e-07 Leucine-rich repeat region
LRR_8 PF13855 216 - 275 2.1e-06 Leucine rich repeat
LRR_8 PF13855 513 - 572 1.1e-07 Leucine rich repeat
LRR_8 PF13855 686 - 744 2.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1247, 1419, 2502
AarI CACCTGC 1 cut(s) 1880
Acc36I ACCTGC 1 cut(s) 1880
AccB1I GGYRCC 1 cut(s) 1748
AccB7I CCANNNNNTGG 1 cut(s) 2402
AccBSI CCGCTC 1 cut(s) 2163
AccI GTMKAC 2 cut(s) 1294, 2044
AciI CCGC 3 cut(s) 525, 1251, 2163
AclWI GGATC 5 cut(s) 652, 1513, 1698, 1968, 2236
AcoI YGGCCR 2 cut(s) 1754, 2164
AcsI RAATTY 8 cut(s) 169, 391, 482, 629, 1125, 1368, 1712, 2169
AcuI CTGAAG 3 cut(s) 290, 319, 1208
AfaI GTAC 4 cut(s) 190, 1813, 1968, 2207
AfiI CCNNNNNNNGG 3 cut(s) 1175, 1225, 2402
AjnI CCWGG 4 cut(s) 564, 1084, 1751, 1807
AjuI GAANNNNNNNTTGG 2 cut(s) 545, 577
Alw26I GTCTC 6 cut(s) 924, 1124, 1139, 1733, 2126, 2221
AlwI GGATC 5 cut(s) 652, 1513, 1698, 1968, 2236
AlwNI CAGNNNCTG 1 cut(s) 701
AoxI GGCC 8 cut(s) 194, 804, 987, 1329, 1754, 1903, 2164, 2309
ApeKI GCWGC 7 cut(s) 210, 246, 940, 1886, 2250, 2406, 2506
ApoI RAATTY 8 cut(s) 169, 391, 482, 629, 1125, 1368, 1712, 2169
AseI ATTAAT 1 cut(s) 837
Asp700I GAANNNNTTC 1 cut(s) 1019
AspS9I GGNCC 5 cut(s) 195, 470, 1063, 1721, 2309
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 2 cut(s) 1322, 1811
AsuII TTCGAA 1 cut(s) 173
AvaII GGWCC 3 cut(s) 470, 1063, 1721
BanI GGYRCC 1 cut(s) 1748
BarI GAAGNNNNNNTAC 2 cut(s) 1155, 1187
BbsI GAAGAC 1 cut(s) 1676
BbvI GCAGC 7 cut(s) 222, 258, 927, 1898, 2262, 2393, 2493
BccI CCATC 6 cut(s) 361, 1834, 1951, 2110, 2135, 2374
BceAI ACGGC 1 cut(s) 1344
BciT130I CCWGG 4 cut(s) 566, 1086, 1753, 1809
BciVI GTATCC 1 cut(s) 2320
BclI TGATCA 1 cut(s) 36
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 6 cut(s) 924, 1124, 1139, 1733, 2126, 2221
BfmI CTRYAG 2 cut(s) 578, 941
BfuAI ACCTGC 1 cut(s) 1880
BfuI GTATCC 1 cut(s) 2320
BglII AGATCT 1 cut(s) 2484
BisI GCNGC 8 cut(s) 211, 247, 941, 1887, 2164, 2251, 2407, 2507
BlsI GCNGC 8 cut(s) 212, 248, 942, 1888, 2165, 2252, 2408, 2508
Bme1390I CCNGG 5 cut(s) 198, 566, 1086, 1753, 1809
Bme18I GGWCC 3 cut(s) 470, 1063, 1721
BmgT120I GGNCC 5 cut(s) 195, 470, 1063, 1721, 2309
BmiI GGNNCC 5 cut(s) 477, 619, 1723, 1750, 2310
BmrFI CCNGG 5 cut(s) 198, 566, 1086, 1753, 1809
BmsI GCATC 3 cut(s) 1639, 1915, 2454
BpiI GAAGAC 1 cut(s) 1676
BplI GAGNNNNNCTC 2 cut(s) 242, 274
Bpu10I CCTNAGC 1 cut(s) 2159
Bpu14I TTCGAA 1 cut(s) 173
BpuEI CTTGAG 3 cut(s) 535, 890, 1255
BpuMI CCSGG 1 cut(s) 198
BsaAI YACGTR 1 cut(s) 1970
BsaI GGTCTC 3 cut(s) 1139, 1733, 2126
BsaJI CCNNGG 3 cut(s) 1326, 1627, 2031
BsaWI WCCGGW 1 cut(s) 472
Bsc4I CCNNNNNNNGG 3 cut(s) 1175, 1225, 2402
Bse1I ACTGG 3 cut(s) 780, 1507, 2076
Bse3DI GCAATG 3 cut(s) 104, 1393, 1842
BseBI CCWGG 4 cut(s) 566, 1086, 1753, 1809
BseDI CCNNGG 3 cut(s) 1326, 1627, 2031
BseGI GGATG 5 cut(s) 60, 812, 1736, 2105, 2469
BseLI CCNNNNNNNGG 3 cut(s) 1175, 1225, 2402
BseMI GCAATG 3 cut(s) 104, 1393, 1842
BseMII CTCAG 6 cut(s) 1469, 1547, 1728, 2039, 2150, 2270
BseNI ACTGG 3 cut(s) 780, 1507, 2076
BseRI GAGGAG 2 cut(s) 1501, 2304
BseXI GCAGC 7 cut(s) 222, 258, 927, 1898, 2262, 2393, 2493
BshFI GGCC 8 cut(s) 196, 806, 989, 1331, 1756, 1905, 2166, 2311
BshNI GGYRCC 1 cut(s) 1748
BsiSI CCGG 2 cut(s) 198, 473
BslFI GGGAC 3 cut(s) 685, 866, 1242
BslI CCNNNNNNNGG 3 cut(s) 1175, 1225, 2402
BsmAI GTCTC 6 cut(s) 924, 1124, 1139, 1733, 2126, 2221
BsmBI CGTCTC 1 cut(s) 1124
BsmFI GGGAC 3 cut(s) 685, 866, 1242
BsmI GAATGC 1 cut(s) 188
BsnI GGCC 8 cut(s) 196, 806, 989, 1331, 1756, 1905, 2166, 2311
Bso31I GGTCTC 3 cut(s) 1139, 1733, 2126
Bsp119I TTCGAA 1 cut(s) 173
Bsp143I GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
BspACI CCGC 3 cut(s) 525, 1251, 2163
BspANI GGCC 8 cut(s) 196, 806, 989, 1331, 1756, 1905, 2166, 2311
BspCNI CTCAG 6 cut(s) 1468, 1548, 1729, 2040, 2151, 2269
BspHI TCATGA 1 cut(s) 406
BspLI GGNNCC 5 cut(s) 477, 619, 1723, 1750, 2310
BspMAI CTGCAG 1 cut(s) 945
BspMI ACCTGC 1 cut(s) 1880
BspPI GGATC 5 cut(s) 652, 1513, 1698, 1968, 2236
BspQI GCTCTTC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 173
BspT107I GGYRCC 1 cut(s) 1748
BspTNI GGTCTC 3 cut(s) 1139, 1733, 2126
BsrBI CCGCTC 1 cut(s) 2163
BsrDI GCAATG 3 cut(s) 104, 1393, 1842
BsrI ACTGG 3 cut(s) 780, 1507, 2076
BssECI CCNNGG 3 cut(s) 1326, 1627, 2031
BssMI GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
BssNAI GTATAC 1 cut(s) 1295
BssT1I CCWWGG 2 cut(s) 1627, 2031
Bst1107I GTATAC 1 cut(s) 1295
Bst2UI CCWGG 4 cut(s) 566, 1086, 1753, 1809
Bst4CI ACNGT 5 cut(s) 70, 582, 1190, 1790, 2455
Bst6I CTCTTC 1 cut(s) 349
BstBAI YACGTR 1 cut(s) 1970
BstBI TTCGAA 1 cut(s) 173
BstC8I GCNNGC 2 cut(s) 1833, 2411
BstDSI CCRYGG 1 cut(s) 1326
BstF5I GGATG 5 cut(s) 60, 812, 1736, 2105, 2469
BstKTI GATC 9 cut(s) 39, 647, 1207, 1411, 1508, 1706, 1963, 2244, 2487
BstMAI GTCTC 6 cut(s) 924, 1124, 1139, 1733, 2126, 2221
BstMBI GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
BstMWI GCNNNNNNNGC 1 cut(s) 2415
BstNI CCWGG 4 cut(s) 566, 1086, 1753, 1809
BstNSI RCATGY 1 cut(s) 1666
BstSCI CCNGG 5 cut(s) 196, 564, 1084, 1751, 1807
BstSFI CTRYAG 2 cut(s) 578, 941
BstSNI TACGTA 1 cut(s) 1970
BstV1I GCAGC 7 cut(s) 222, 258, 927, 1898, 2262, 2393, 2493
BstV2I GAAGAC 1 cut(s) 1676
BstX2I RGATCY 4 cut(s) 644, 1505, 1960, 2484
BstXI CCANNNNNNTGG 1 cut(s) 2038
BstYI RGATCY 4 cut(s) 644, 1505, 1960, 2484
BstZ17I GTATAC 1 cut(s) 1295
BsuI GTATCC 1 cut(s) 2320
BsuRI GGCC 8 cut(s) 196, 806, 989, 1331, 1756, 1905, 2166, 2311
BtgI CCRYGG 1 cut(s) 1326
BtsCI GGATG 5 cut(s) 60, 812, 1736, 2105, 2469
BtsI GCAGTG 2 cut(s) 1986, 2425
BtsIMutI CAGTG 5 cut(s) 343, 773, 1986, 2425, 2430
BveI ACCTGC 1 cut(s) 1880
Cac8I GCNNGC 2 cut(s) 1833, 2411
CaiI CAGNNNCTG 1 cut(s) 701
CciI TCATGA 1 cut(s) 406
Cfr13I GGNCC 5 cut(s) 195, 470, 1063, 1721, 2309
CsiI ACCWGGT 1 cut(s) 1807
Csp6I GTAC 4 cut(s) 189, 1812, 1967, 2206
CspCI CAANNNNNGTGG 4 cut(s) 319, 354, 1375, 1410
CviAII CATG 7 cut(s) 165, 261, 407, 614, 1663, 1827, 2119
CviQI GTAC 4 cut(s) 189, 1812, 1967, 2206
DpnI GATC 9 cut(s) 38, 646, 1206, 1410, 1507, 1705, 1962, 2243, 2486
DpnII GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
EaeI YGGCCR 2 cut(s) 1754, 2164
Eam1104I CTCTTC 1 cut(s) 349
EarI CTCTTC 1 cut(s) 349
Eco105I TACGTA 1 cut(s) 1970
Eco130I CCWWGG 2 cut(s) 1627, 2031
Eco147I AGGCCT 1 cut(s) 989
Eco31I GGTCTC 3 cut(s) 1139, 1733, 2126
Eco47I GGWCC 3 cut(s) 470, 1063, 1721
Eco57I CTGAAG 3 cut(s) 290, 319, 1208
EcoO109I RGGNCCY 1 cut(s) 2309
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 4 cut(s) 564, 1084, 1751, 1807
EcoT14I CCWWGG 2 cut(s) 1627, 2031
EcoT22I ATGCAT 1 cut(s) 2469
ErhI CCWWGG 2 cut(s) 1627, 2031
Esp3I CGTCTC 1 cut(s) 1124
FaeI CATG 7 cut(s) 168, 264, 410, 617, 1666, 1830, 2122
FaqI GGGAC 3 cut(s) 685, 866, 1242
FatI CATG 7 cut(s) 164, 260, 406, 613, 1662, 1826, 2118
FbaI TGATCA 1 cut(s) 36
FblI GTMKAC 2 cut(s) 1294, 2044
Fnu4HI GCNGC 8 cut(s) 211, 247, 941, 1887, 2164, 2251, 2407, 2507
FokI GGATG 5 cut(s) 47, 799, 1743, 2092, 2476
Fsp4HI GCNGC 8 cut(s) 211, 247, 941, 1887, 2164, 2251, 2407, 2507
GluI GCNGC 8 cut(s) 211, 247, 941, 1887, 2164, 2251, 2407, 2507
HaeIII GGCC 8 cut(s) 196, 806, 989, 1331, 1756, 1905, 2166, 2311
HapII CCGG 2 cut(s) 198, 473
Hin1II CATG 7 cut(s) 168, 264, 410, 617, 1666, 1830, 2122
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HindIII AAGCTT 5 cut(s) 368, 422, 866, 1609, 1760
HpaII CCGG 2 cut(s) 198, 473
HphI GGTGA 2 cut(s) 1322, 1811
Hpy166II GTNNAC 4 cut(s) 73, 589, 1295, 2045
Hpy8I GTNNAC 4 cut(s) 73, 589, 1295, 2045
Hpy99I CGWCG 2 cut(s) 2269, 2356
HpyAV CCTTC 2 cut(s) 2293, 2440
HpyCH4III ACNGT 5 cut(s) 70, 582, 1190, 1790, 2455
HpyCH4IV ACGT 5 cut(s) 440, 995, 1969, 2267, 2354
HpyF10VI GCNNNNNNNGC 1 cut(s) 2415
HpySE526I ACGT 5 cut(s) 440, 995, 1969, 2267, 2354
Hsp92II CATG 7 cut(s) 168, 264, 410, 617, 1666, 1830, 2122
Ksp22I TGATCA 1 cut(s) 36
Kzo9I GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 3 cut(s) 542, 1171, 2285
Lsp1109I GCAGC 7 cut(s) 222, 258, 927, 1898, 2262, 2393, 2493
LweI GCATC 3 cut(s) 1639, 1915, 2454
MabI ACCWGGT 1 cut(s) 1807
MaeII ACGT 5 cut(s) 440, 995, 1969, 2267, 2354
MalI GATC 9 cut(s) 38, 646, 1206, 1410, 1507, 1705, 1962, 2243, 2486
MbiI CCGCTC 1 cut(s) 2163
MboI GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
MfeI CAATTG 3 cut(s) 791, 1099, 1600
MflI RGATCY 4 cut(s) 644, 1505, 1960, 2484
MlyI GAGTC 5 cut(s) 260, 526, 692, 696, 1447
MmeI TCCRAC 7 cut(s) 211, 316, 840, 912, 1731, 2375, 2515
Mph1103I ATGCAT 1 cut(s) 2469
MroXI GAANNNNTTC 1 cut(s) 1019
MseI TTAA 8 cut(s) 135, 395, 443, 837, 1470, 1845, 2357, 2521
MspI CCGG 2 cut(s) 198, 473
MspR9I CCNGG 5 cut(s) 198, 566, 1086, 1753, 1809
MunI CAATTG 3 cut(s) 791, 1099, 1600
Mva1269I GAATGC 1 cut(s) 188
MvaI CCWGG 4 cut(s) 566, 1086, 1753, 1809
MwoI GCNNNNNNNGC 1 cut(s) 2415
NciI CCSGG 1 cut(s) 198
NdeII GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
NlaIII CATG 7 cut(s) 168, 264, 410, 617, 1666, 1830, 2122
NlaIV GGNNCC 5 cut(s) 477, 619, 1723, 1750, 2310
NmuCI GTSAC 1 cut(s) 771
NsiI ATGCAT 1 cut(s) 2469
NspI RCATGY 1 cut(s) 1666
NspV TTCGAA 1 cut(s) 173
PagI TCATGA 1 cut(s) 406
PaqCI CACCTGC 1 cut(s) 1880
PceI AGGCCT 1 cut(s) 989
PciSI GCTCTTC 1 cut(s) 349
PctI GAATGC 1 cut(s) 188
PdmI GAANNNNTTC 1 cut(s) 1019
PfeI GAWTC 9 cut(s) 101, 410, 428, 610, 653, 982, 1081, 1434, 1632
PflMI CCANNNNNTGG 1 cut(s) 2402
PkrI GCNGC 8 cut(s) 212, 248, 942, 1888, 2165, 2252, 2408, 2508
PleI GAGTC 5 cut(s) 259, 525, 692, 695, 1447
PpsI GAGTC 5 cut(s) 259, 525, 692, 695, 1447
Ppu21I YACGTR 1 cut(s) 1970
PshBI ATTAAT 1 cut(s) 837
PsiI TTATAA 3 cut(s) 1247, 1419, 2502
Psp6I CCWGG 4 cut(s) 564, 1084, 1751, 1807
PspGI CCWGG 4 cut(s) 564, 1084, 1751, 1807
PspN4I GGNNCC 5 cut(s) 477, 619, 1723, 1750, 2310
PspPI GGNCC 5 cut(s) 195, 470, 1063, 1721, 2309
PstI CTGCAG 1 cut(s) 945
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 4 cut(s) 644, 1505, 1960, 2484
RsaI GTAC 4 cut(s) 190, 1813, 1968, 2207
RsaNI GTAC 4 cut(s) 189, 1812, 1967, 2206
SapI GCTCTTC 1 cut(s) 349
SaqAI TTAA 8 cut(s) 135, 395, 443, 837, 1470, 1845, 2357, 2521
SatI GCNGC 8 cut(s) 211, 247, 941, 1887, 2164, 2251, 2407, 2507
Sau3AI GATC 9 cut(s) 36, 644, 1204, 1408, 1505, 1703, 1960, 2241, 2484
Sau96I GGNCC 5 cut(s) 195, 470, 1063, 1721, 2309
SchI GAGTC 5 cut(s) 260, 526, 692, 696, 1447
ScrFI CCNGG 5 cut(s) 198, 566, 1086, 1753, 1809
SexAI ACCWGGT 1 cut(s) 1807
SfaNI GCATC 3 cut(s) 1639, 1915, 2454
SfcI CTRYAG 2 cut(s) 578, 941
SfuI TTCGAA 1 cut(s) 173
SinI GGWCC 3 cut(s) 470, 1063, 1721
SmlI CTYRAG 3 cut(s) 514, 869, 1270
SmoI CTYRAG 3 cut(s) 514, 869, 1270
SnaBI TACGTA 1 cut(s) 1970
SseBI AGGCCT 1 cut(s) 989
SsiI CCGC 3 cut(s) 525, 1251, 2163
SspI AATATT 1 cut(s) 447
StuI AGGCCT 1 cut(s) 989
StyD4I CCNGG 5 cut(s) 196, 564, 1084, 1751, 1807
StyI CCWWGG 2 cut(s) 1627, 2031
TaaI ACNGT 5 cut(s) 70, 582, 1190, 1790, 2455
TaiI ACGT 5 cut(s) 443, 998, 1972, 2270, 2357
TaqI TCGA 7 cut(s) 173, 651, 833, 1579, 2130, 2264, 2286
TatI WGTACW 1 cut(s) 188
TauI GCSGC 1 cut(s) 2166
TfiI GAWTC 9 cut(s) 101, 410, 428, 610, 653, 982, 1081, 1434, 1632
Tru1I TTAA 8 cut(s) 135, 395, 443, 837, 1470, 1845, 2357, 2521
Tru9I TTAA 8 cut(s) 135, 395, 443, 837, 1470, 1845, 2357, 2521
TscAI CASTG 5 cut(s) 343, 780, 1993, 2425, 2437
TseFI GTSAC 1 cut(s) 771
TseI GCWGC 7 cut(s) 210, 246, 940, 1886, 2250, 2406, 2506
Tsp45I GTSAC 1 cut(s) 771
TspDTI ATGAA 4 cut(s) 395, 423, 602, 1306
TspGWI ACGGA 1 cut(s) 2509
TspRI CASTG 5 cut(s) 343, 780, 1993, 2425, 2437
Van91I CCANNNNNTGG 1 cut(s) 2402
VpaK11BI GGWCC 3 cut(s) 470, 1063, 1721
VspI ATTAAT 1 cut(s) 837
XapI RAATTY 8 cut(s) 169, 391, 482, 629, 1125, 1368, 1712, 2169
XbaI TCTAGA 3 cut(s) 725, 1159, 1951
XceI RCATGY 1 cut(s) 1666
XmiI GTMKAC 2 cut(s) 1294, 2044
XmnI GAANNNNTTC 1 cut(s) 1019
Zsp2I ATGCAT 1 cut(s) 2469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.