RLG00000030078

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000047
Physical Location & Seq
Reverse (-)
54742618 .. 54745731
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030078

Sequence Viewer

Length: 2577 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACGACCACTGTTACTAACCTCATCCCCGCAGTTCACAGCAACTGTATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAACAAAGTCTTGAATTTGATGCTTCCAAACACTCGAAGCTTATCACATGGAATTCGAGTACCGACTGCTGCTCTTGGCTCGGTGTAAATTGCAGCACCAATGGGAGCGTTGTCGGTCTTGACCTCAGCAGCGAGTCTATCTCATGCAGTATTGACAATTCTAGCAGTCTTTTCCAACTTCAACATCTTCAGAGCCTCAATTTGGCCCATAACAGCTTCAATGGCTCTTCAATTCCATCTGCAATTGGAAAGCTTGCAAATTTGAGGTATTTGAATTTAAGTGAAGCCAATTTTTCTGGGCAAATTCCCATTGAGGTTGCAAGCTTGAAAAGGCTTCATTCTCTATCCATGTTAATATTGGATAACAACTACATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGGTTACCTTGAGTCTCTCTGATTGTAACTTGTATGGAGCATTTCCCAAAGAGATATTCCAAATACCTTCACTACAGTCTGTTGACCTATCAGCTAATTCAGGGCTTTGTGGTCTCTTACCAGAGTTTCCAAAGAATGGATCTCTCGAATCCCTAGTTCTATACTCGACTAAGTTTTCAGGAGTCTTGCCGGACTCTATTGGCAATCTTAAAATGCTGTCTATATTAGATCTTTCATATTGCAATTTCACAGGAGCAGTTCCAAAGTCACTGGCAAACCTAACACAATTAGGGTATTTGGACTTGTCATCCAACAAGTTTTCTAGTTCAATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGGGGTTCTCAAAATGGCTGACAATCTACTCTACGGGAGAATTCCATTATCTCCCTTTTCTATTCCCTCGCTGCAGAGCTTAAAGCTTTCTGGAAATCACTTCTCTGGCCAGTTGCTTGAATTTTCTAATGTCTCTTCGTACTGGCTGAGTGGACTTGATTTGAGCAACCAGATTTCAGGTCAGATACCCAACTGGATTTGGGAGCTTCAACTCACGAAGCTATATCTATGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACTTGGTTCTACTTACAATCTAATTTACATTGATCTTCACTCAAACCAGCTTCAGGGACAAATACCATTGTTTGTAAGTGGTGACTATTTGGATTACTCAAGAAATAACTTCAGCTCTAGTATACCAATTGACATTGGGGATTTCATGTCCTCCACGGTCTACCTTTCTCTTTCAAGCAGTAACCTGTATGGGGAAATTCCAAAATCAATCTGCAATGCAAGTAGTCTAGTTCTTGATCTCTCTAATAACTCTTTGAGTGGAATCATTCCCCAATGCTTGACTCAGAATTCTCTTTCTGTCCTTGATTTGAGGAGAAACAAGCTTACTGGATCTATTCCCGATACTTTTCGTGAAGGTGGTTGTTTTTTGCAAACTCTAGCTCTAAGCAGAAATCAGATACAAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCAAAGTTAAAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCTTTTCCCTGCTTGTTGAAGACCATATCCACCTTGCGTGTCCTTATGTTGCGATCCAACAAATTTTATGGACCCATTGGATGTCCTGAGACCAATGGCACCTGGTCGGAGCTTCAAATCATAGACTTAGCTCATAACAGCTTCAATGGTGAAATACCAGGTACATCATTGACAACATGGCAGGCAATGATGGTTAATGAAGATTACCAAAGCTTTTTAGGGGTACCTGGTCCTGGAATTGAGGCCCCTATTAATTATGGAGATGCAGTGACGACTACAAGCAAAAGTGAAGAGATGGATCTTGTAAAAATTTTAACAATCTTCACTTCGATTGACTTCTCTGTTAACAAGTTCAATGGAACAATACCCAAGGAAATGGGCCAACTGAGATCATTACATGTCCTCAATCTGTCCAATAATGCTTTCACAGGTGAAATCCCATCATCCTTTGGTAACATGAATAGTATAGAGTCCTTGGACATCTCACAGAACCACCTCAGCGGCCAAATTCCACCGCAGTTTGCAAATCTCACTTTCCTTTCGTACTTGAATGTCTCATATAATCAACTGACGGGAAGAATCCCAACCAGCACTCAGTTTTCGACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAGCAACCGTATTGCCACATCCAACATTAAATGGAAGCTCAAGCAATCCAAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAACATCTTGTTCAAGATATTCCCTCAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAAGCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

859

Amino Acids

94.7

Weight (kDa)

6.6

Isoelectric Point (pI)

35.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 1.8e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 207 2.6e-09 Leucine-rich repeat region
LRR_8 PF13855 153 - 210 6.5e-06 Leucine rich repeat
LRR_8 PF13855 225 - 284 6.5e-07 Leucine rich repeat
LRR_8 PF13855 510 - 568 5.2e-06 Leucine rich repeat
LRR_8 PF13855 676 - 736 2.7e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1861
AccB1I GGYRCC 2 cut(s) 1736, 1861
AccB7I CCANNNNNTGG 2 cut(s) 668, 2360
AccI GTMKAC 2 cut(s) 1282, 1320
AciI CCGC 3 cut(s) 66, 2139, 2153
AclWI GGATC 4 cut(s) 679, 1498, 1686, 1944
AcoI YGGCCR 2 cut(s) 1003, 2140
AcuI CTGAAG 3 cut(s) 290, 1196, 1255
AfaI GTAC 5 cut(s) 178, 1037, 1801, 1863, 2183
AfiI CCNNNNNNNGG 8 cut(s) 319, 668, 1163, 1213, 1351, 1871, 2360, 2512
AflIII ACRYGT 2 cut(s) 2035, 2408
AjnI CCWGG 4 cut(s) 1739, 1795, 1864, 1870
AjuI GAANNNNNNNTTGG 6 cut(s) 572, 604, 2045, 2077, 2508, 2540
Alw26I GTCTC 6 cut(s) 551, 650, 1033, 1721, 2197, 2563
AlwI GGATC 4 cut(s) 679, 1498, 1686, 1944
AlwNI CAGNNNCTG 1 cut(s) 81
AoxI GGCC 6 cut(s) 321, 1003, 1881, 2017, 2140, 2285
ApeKI GCWGC 4 cut(s) 186, 210, 246, 967
AseI ATTAAT 2 cut(s) 864, 1890
Asp718I GGTACC 1 cut(s) 1861
AspS9I GGNCC 7 cut(s) 322, 497, 1709, 1868, 1882, 2017, 2285
AsuHPI GGTGA 3 cut(s) 1253, 1799, 2081
AvaII GGWCC 3 cut(s) 497, 1709, 1868
BalI TGGCCA 1 cut(s) 1005
BanI GGYRCC 2 cut(s) 1736, 1861
BarI GAAGNNNNNNTAC 2 cut(s) 1143, 1175
BbsI GAAGAC 1 cut(s) 1664
BbvCI CCTCAGC 3 cut(s) 242, 2135, 2508
BbvI GCAGC 4 cut(s) 173, 222, 258, 954
BccI CCATC 5 cut(s) 361, 1822, 1927, 2086, 2448
BceAI ACGGC 1 cut(s) 2411
BciT130I CCWGG 4 cut(s) 1741, 1797, 1866, 1872
BciVI GTATCC 1 cut(s) 2296
BcoDI GTCTC 6 cut(s) 551, 650, 1033, 1721, 2197, 2563
BfaI CTAG 8 cut(s) 279, 686, 855, 1148, 1278, 1388, 1538, 1583
BfmI CTRYAG 2 cut(s) 605, 968
BfuI GTATCC 1 cut(s) 2296
BglII AGATCT 1 cut(s) 760
BisI GCNGC 5 cut(s) 187, 211, 247, 968, 2140
BlsI GCNGC 5 cut(s) 188, 212, 248, 969, 2141
Bme1390I CCNGG 4 cut(s) 1741, 1797, 1866, 1872
Bme18I GGWCC 3 cut(s) 497, 1709, 1868
BmgT120I GGNCC 7 cut(s) 322, 497, 1709, 1868, 1882, 2017, 2285
BmiI GGNNCC 6 cut(s) 504, 1711, 1738, 1863, 1884, 2286
BmrFI CCNGG 4 cut(s) 1741, 1797, 1866, 1872
BmsI GCATC 3 cut(s) 127, 1627, 1891
BpiI GAAGAC 1 cut(s) 1664
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2382
Bpu10I CCTNAGC 3 cut(s) 242, 2135, 2508
BpuEI CTTGAG 3 cut(s) 562, 1243, 2329
BsaI GGTCTC 2 cut(s) 650, 1721
BsaJI CCNNGG 4 cut(s) 1314, 1615, 2007, 2112
BsaWI WCCGGW 1 cut(s) 499
BsaXI ACNNNNNCTCC 2 cut(s) 1890, 1920
Bsc4I CCNNNNNNNGG 8 cut(s) 319, 668, 1163, 1213, 1351, 1871, 2360, 2512
Bse1I ACTGG 5 cut(s) 807, 1006, 1043, 1094, 1492
Bse3DI GCAATG 3 cut(s) 104, 1381, 1830
BseBI CCWGG 4 cut(s) 1741, 1797, 1866, 1872
BseDI CCNNGG 4 cut(s) 1314, 1615, 2007, 2112
BseGI GGATG 5 cut(s) 60, 839, 1724, 2081, 2323
BseLI CCNNNNNNNGG 8 cut(s) 319, 668, 1163, 1213, 1351, 1871, 2360, 2512
BseMI GCAATG 3 cut(s) 104, 1381, 1830
BseMII CTCAG 8 cut(s) 256, 1034, 1457, 1716, 2015, 2149, 2246, 2522
BseNI ACTGG 5 cut(s) 807, 1006, 1043, 1094, 1492
BseRI GAGGAG 2 cut(s) 1486, 2280
BseXI GCAGC 4 cut(s) 173, 222, 258, 954
BshFI GGCC 6 cut(s) 323, 1005, 1883, 2019, 2142, 2287
BshNI GGYRCC 2 cut(s) 1736, 1861
BsiSI CCGG 2 cut(s) 500, 722
BslFI GGGAC 2 cut(s) 893, 1230
BslI CCNNNNNNNGG 8 cut(s) 319, 668, 1163, 1213, 1351, 1871, 2360, 2512
BsmAI GTCTC 6 cut(s) 551, 650, 1033, 1721, 2197, 2563
BsmBI CGTCTC 1 cut(s) 2563
BsmFI GGGAC 2 cut(s) 893, 1230
BsnI GGCC 6 cut(s) 323, 1005, 1883, 2019, 2142, 2287
Bso31I GGTCTC 2 cut(s) 650, 1721
Bsp143I GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
BspACI CCGC 3 cut(s) 66, 2139, 2153
BspANI GGCC 6 cut(s) 323, 1005, 1883, 2019, 2142, 2287
BspCNI CTCAG 8 cut(s) 255, 1035, 1456, 1717, 2016, 2148, 2245, 2521
BspLI GGNNCC 6 cut(s) 504, 1711, 1738, 1863, 1884, 2286
BspMAI CTGCAG 1 cut(s) 972
BspPI GGATC 4 cut(s) 679, 1498, 1686, 1944
BspQI GCTCTTC 1 cut(s) 349
BspT107I GGYRCC 2 cut(s) 1736, 1861
BspTNI GGTCTC 2 cut(s) 650, 1721
BsrDI GCAATG 3 cut(s) 104, 1381, 1830
BsrI ACTGG 5 cut(s) 807, 1006, 1043, 1094, 1492
BssECI CCNNGG 4 cut(s) 1314, 1615, 2007, 2112
BssMI GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
BssNAI GTATAC 1 cut(s) 1283
BssT1I CCWWGG 3 cut(s) 1615, 2007, 2112
Bst1107I GTATAC 1 cut(s) 1283
Bst2UI CCWGG 4 cut(s) 1741, 1797, 1866, 1872
Bst4CI ACNGT 5 cut(s) 49, 83, 609, 1318, 2314
Bst6I CTCTTC 3 cut(s) 349, 1036, 1923
BstC8I GCNNGC 3 cut(s) 372, 439, 1821
BstDSI CCRYGG 1 cut(s) 1314
BstEII GGTNACC 1 cut(s) 535
BstF5I GGATG 5 cut(s) 60, 839, 1724, 2081, 2323
BstKTI GATC 8 cut(s) 674, 763, 1195, 1399, 1493, 1694, 1939, 2030
BstMAI GTCTC 6 cut(s) 551, 650, 1033, 1721, 2197, 2563
BstMBI GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
BstMWI GCNNNNNNNGC 1 cut(s) 339
BstNI CCWGG 4 cut(s) 1741, 1797, 1866, 1872
BstNSI RCATGY 3 cut(s) 2039, 2412, 2546
BstPI GGTNACC 1 cut(s) 535
BstSCI CCNGG 4 cut(s) 1739, 1795, 1864, 1870
BstSFI CTRYAG 2 cut(s) 605, 968
BstV1I GCAGC 4 cut(s) 173, 222, 258, 954
BstV2I GAAGAC 1 cut(s) 1664
BstX2I RGATCY 4 cut(s) 671, 760, 1490, 1936
BstXI CCANNNNNNTGG 1 cut(s) 2014
BstYI RGATCY 4 cut(s) 671, 760, 1490, 1936
BstZ17I GTATAC 1 cut(s) 1283
BsuI GTATCC 1 cut(s) 2296
BsuRI GGCC 6 cut(s) 323, 1005, 1883, 2019, 2142, 2287
BtgI CCRYGG 1 cut(s) 1314
BtsCI GGATG 5 cut(s) 60, 839, 1724, 2081, 2323
BtsI GCAGTG 1 cut(s) 1911
BtsIMutI CAGTG 4 cut(s) 45, 800, 1911, 2395
Cac8I GCNNGC 3 cut(s) 372, 439, 1821
CaiI CAGNNNCTG 1 cut(s) 81
Cfr13I GGNCC 7 cut(s) 322, 497, 1709, 1868, 1882, 2017, 2285
CsiI ACCWGGT 3 cut(s) 1739, 1795, 1864
Csp6I GTAC 5 cut(s) 177, 1036, 1800, 1862, 2182
CviAII CATG 9 cut(s) 165, 261, 466, 1306, 1815, 2036, 2095, 2409, 2543
CviQI GTAC 5 cut(s) 177, 1036, 1800, 1862, 2182
DpnI GATC 8 cut(s) 673, 762, 1194, 1398, 1492, 1693, 1938, 2029
DpnII GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
EaeI YGGCCR 2 cut(s) 1003, 2140
Eam1104I CTCTTC 3 cut(s) 349, 1036, 1923
EarI CTCTTC 3 cut(s) 349, 1036, 1923
Eco130I CCWWGG 3 cut(s) 1615, 2007, 2112
Eco31I GGTCTC 2 cut(s) 650, 1721
Eco47I GGWCC 3 cut(s) 497, 1709, 1868
Eco57I CTGAAG 3 cut(s) 290, 1196, 1255
Eco91I GGTNACC 1 cut(s) 535
EcoO109I RGGNCCY 2 cut(s) 1882, 2285
EcoO65I GGTNACC 1 cut(s) 535
EcoRI GAATTC 3 cut(s) 169, 936, 1447
EcoRII CCWGG 4 cut(s) 1739, 1795, 1864, 1870
EcoT14I CCWWGG 3 cut(s) 1615, 2007, 2112
ErhI CCWWGG 3 cut(s) 1615, 2007, 2112
Esp3I CGTCTC 1 cut(s) 2563
FaeI CATG 9 cut(s) 168, 264, 469, 1309, 1818, 2039, 2098, 2412, 2546
FaqI GGGAC 2 cut(s) 893, 1230
FatI CATG 9 cut(s) 164, 260, 465, 1305, 1814, 2035, 2094, 2408, 2542
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 2 cut(s) 1282, 1320
Fnu4HI GCNGC 5 cut(s) 187, 211, 247, 968, 2140
FokI GGATG 5 cut(s) 47, 826, 1731, 2068, 2310
Fsp4HI GCNGC 5 cut(s) 187, 211, 247, 968, 2140
FspBI CTAG 8 cut(s) 279, 686, 855, 1148, 1278, 1388, 1538, 1583
GluI GCNGC 5 cut(s) 187, 211, 247, 968, 2140
GsuI CTGGAG 1 cut(s) 2382
HaeIII GGCC 6 cut(s) 323, 1005, 1883, 2019, 2142, 2287
HapII CCGG 2 cut(s) 500, 722
Hin1II CATG 9 cut(s) 168, 264, 469, 1309, 1818, 2039, 2098, 2412, 2546
HincII GTYRAC 2 cut(s) 616, 1984
HindII GTYRAC 2 cut(s) 616, 1984
HindIII AAGCTT 8 cut(s) 155, 368, 439, 529, 893, 980, 1481, 1849
HpaI GTTAAC 1 cut(s) 1984
HpaII CCGG 2 cut(s) 500, 722
HphI GGTGA 3 cut(s) 1253, 1799, 2081
Hpy166II GTNNAC 7 cut(s) 73, 616, 1049, 1283, 1321, 1984, 2548
Hpy188I TCNGA 8 cut(s) 309, 553, 1080, 1446, 1557, 1747, 2295, 2302
Hpy8I GTNNAC 7 cut(s) 73, 616, 1049, 1283, 1321, 1984, 2548
Hpy99I CGWCG 1 cut(s) 2432
HpyAV CCTTC 4 cut(s) 609, 1508, 2269, 2532
HpyCH4III ACNGT 5 cut(s) 49, 83, 609, 1318, 2314
HpyCH4IV ACGT 1 cut(s) 2572
HpyF10VI GCNNNNNNNGC 1 cut(s) 339
HpySE526I ACGT 1 cut(s) 2572
Hsp92II CATG 9 cut(s) 168, 264, 469, 1309, 1818, 2039, 2098, 2412, 2546
KpnI GGTACC 1 cut(s) 1865
KspAI GTTAAC 1 cut(s) 1984
Kzo9I GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 7 cut(s) 114, 222, 569, 785, 1099, 1159, 1747
Lsp1109I GCAGC 4 cut(s) 173, 222, 258, 954
LweI GCATC 3 cut(s) 127, 1627, 1891
MabI ACCWGGT 3 cut(s) 1739, 1795, 1864
MaeI CTAG 8 cut(s) 279, 686, 855, 1148, 1278, 1388, 1538, 1583
MaeII ACGT 1 cut(s) 2572
MalI GATC 8 cut(s) 673, 762, 1194, 1398, 1492, 1693, 1938, 2029
MboI GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
MfeI CAATTG 3 cut(s) 360, 1287, 1588
MflI RGATCY 4 cut(s) 671, 760, 1490, 1936
MlsI TGGCCA 1 cut(s) 1005
MluNI TGGCCA 1 cut(s) 1005
MlyI GAGTC 6 cut(s) 260, 553, 719, 723, 1435, 2117
MmeI TCCRAC 5 cut(s) 316, 867, 1719, 1725, 2351
Mox20I TGGCCA 1 cut(s) 1005
MscI TGGCCA 1 cut(s) 1005
Msp20I TGGCCA 1 cut(s) 1005
MspA1I CMGCKG 2 cut(s) 2139, 2512
MspI CCGG 2 cut(s) 500, 722
MspR9I CCNGG 4 cut(s) 1741, 1797, 1866, 1872
MunI CAATTG 3 cut(s) 360, 1287, 1588
MvaI CCWGG 4 cut(s) 1741, 1797, 1866, 1872
MwoI GCNNNNNNNGC 1 cut(s) 339
NdeII GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
NlaIII CATG 9 cut(s) 168, 264, 469, 1309, 1818, 2039, 2098, 2412, 2546
NlaIV GGNNCC 6 cut(s) 504, 1711, 1738, 1863, 1884, 2286
NmuCI GTSAC 4 cut(s) 798, 1241, 1906, 2433
NspI RCATGY 3 cut(s) 2039, 2412, 2546
PciI ACATGT 2 cut(s) 2035, 2408
PciSI GCTCTTC 1 cut(s) 349
PfeI GAWTC 4 cut(s) 680, 1422, 1620, 2217
PflMI CCANNNNNTGG 2 cut(s) 668, 2360
PfoI TCCNGGA 1 cut(s) 1870
PkrI GCNGC 5 cut(s) 188, 212, 248, 969, 2141
PleI GAGTC 6 cut(s) 259, 552, 719, 722, 1435, 2116
PpsI GAGTC 6 cut(s) 259, 552, 719, 722, 1435, 2116
PscI ACATGT 2 cut(s) 2035, 2408
PshBI ATTAAT 2 cut(s) 864, 1890
Psp6I CCWGG 4 cut(s) 1739, 1795, 1864, 1870
PspEI GGTNACC 1 cut(s) 535
PspGI CCWGG 4 cut(s) 1739, 1795, 1864, 1870
PspN4I GGNNCC 6 cut(s) 504, 1711, 1738, 1863, 1884, 2286
PspPI GGNCC 7 cut(s) 322, 497, 1709, 1868, 1882, 2017, 2285
PstI CTGCAG 1 cut(s) 972
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 4 cut(s) 671, 760, 1490, 1936
PvuII CAGCTG 1 cut(s) 2512
RsaI GTAC 5 cut(s) 178, 1037, 1801, 1863, 2183
RsaNI GTAC 5 cut(s) 177, 1036, 1800, 1862, 2182
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 5 cut(s) 187, 211, 247, 968, 2140
Sau3AI GATC 8 cut(s) 671, 760, 1192, 1396, 1490, 1691, 1936, 2027
Sau96I GGNCC 7 cut(s) 322, 497, 1709, 1868, 1882, 2017, 2285
SchI GAGTC 6 cut(s) 260, 553, 719, 723, 1435, 2117
ScrFI CCNGG 4 cut(s) 1741, 1797, 1866, 1872
SexAI ACCWGGT 3 cut(s) 1739, 1795, 1864
SfaNI GCATC 3 cut(s) 127, 1627, 1891
SfcI CTRYAG 2 cut(s) 605, 968
SinI GGWCC 3 cut(s) 497, 1709, 1868
SmlI CTYRAG 3 cut(s) 541, 1258, 2344
SmoI CTYRAG 3 cut(s) 541, 1258, 2344
SsiI CCGC 3 cut(s) 66, 2139, 2153
SspI AATATT 1 cut(s) 474
SspMI CTAG 8 cut(s) 279, 686, 855, 1148, 1278, 1388, 1538, 1583
StyD4I CCNGG 4 cut(s) 1739, 1795, 1864, 1870
StyI CCWWGG 3 cut(s) 1615, 2007, 2112
TaaI ACNGT 5 cut(s) 49, 83, 609, 1318, 2314
TaiI ACGT 1 cut(s) 2575
TaqI TCGA 7 cut(s) 152, 173, 678, 698, 1967, 2240, 2262
TaqII GACCGA 1 cut(s) 221
TauI GCSGC 1 cut(s) 2142
TfiI GAWTC 4 cut(s) 680, 1422, 1620, 2217
TscAI CASTG 4 cut(s) 52, 807, 1911, 2395
TseFI GTSAC 4 cut(s) 798, 1241, 1906, 2433
TseI GCWGC 4 cut(s) 186, 210, 246, 967
Tsp45I GTSAC 4 cut(s) 798, 1241, 1906, 2433
TspDTI ATGAA 5 cut(s) 443, 756, 1294, 1851, 2111
TspRI CASTG 4 cut(s) 52, 807, 1911, 2395
Van91I CCANNNNNTGG 2 cut(s) 668, 2360
VpaK11BI GGWCC 3 cut(s) 497, 1709, 1868
VspI ATTAAT 2 cut(s) 864, 1890
XbaI TCTAGA 1 cut(s) 1147
XceI RCATGY 3 cut(s) 2039, 2412, 2546
XcmI CCANNNNNNNNNTGG 1 cut(s) 472
XmiI GTMKAC 2 cut(s) 1282, 1320
XspI CTAG 8 cut(s) 279, 686, 855, 1148, 1278, 1388, 1538, 1583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.