Rmu_sc0003078.1_g000013

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003078.1
OG0000047
Physical Location & Seq
Forward (+)
92789 .. 97936
5148 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003078.1_g000013.1.cds

Sequence Viewer

Length: 3534 bp
atgggcgtgttgtcggacttgacctcagggaaggtgttagaccttgagaaatcgaagtttggcactgcaatccagtaccttagagaccttacagcgttaaaacttgagaacccgaatttaggcactttaatccagaaccttaccgagcttacagagttaaatcttgattctgtaaagatatcaggacaggggagtgactggtgtgaagccatatcatcttcactgccaaatctgagggtgttgagcttgtcttattgtggtctttcaggccctatttgtgagtcccttgcaaagcttcaatctctgtatgagattgacttgtcatataactccttctatgctccggttccaagattctttgccaattttccaaacttgacttacctgagtcttagttattcctacttgctcggaacatttccccaagagatctttcagataccttccctacaaaccattggcctttctggtaatggtgttcttcatggttcctttccagaatttccaaacaatgggtctcttcgatccttaattgtagatgggacaagtttttcaggtgacctgcccaactctattggaaatcttaagatgttgtcaagtgtatatctttcagagtgcaatttcacaggatcagttcccaagtcgattgaaaacctcacactattggctgacctggacatttccgggaacagatttaatagtcccattagttctattcactgggaaacccttgttaatctggaacacctcgatttgagcaaaaatcaactctatgggactattccttcatctgttgtttctcttcccaaactggaaacagtaagtctatcccacaatcggttctcggttatagaagctcctcttcctaattccacttctgctttatcttctctggaccttcagtccaacaagcttcaaggcgagatacctaattggattttgagtctcaaatctcttaattcccttgatctttctaacaactccttggtgactctagaagctcctcttcctaattccacttctgctttatcttctctggaccttcagtccaacaagcttcaaggcgagatacctaattggattttgagtctcaaatctcttaattcccttgatctttctaacaactccttggtgactctagaagctcctcttcctaattccacttctgctttatcttctctggaccttcagtccaacaagcttcaaggcgagatacctaattggattttgagtctcaaatctcttaattcccttgatctttctaacaactccttggtgactctagaagctcctcttcctaattccacttctgctttatcttctctggaccttcagtccaacaagcttcaaggcgagatacctaattggattttgagtctcaaatctcttaattcccttgatctttctaacaactccttggtgactctagaagctcctcttcctaattccacttctgctttatcttctctggagcttcattccaacaaacttcaaggtatccattcctcatattccttccttcagcttaattacttgggattagcttctaacaagttgacaagattcccagacttcttgagaaatcaatcccatttaaccaacttggacctctcagacaaccagattcaaggacagatacccaattggatttggattttggattctcttcaaaaattaaatctttcttgtaactccttggaaagtttagaagctcctctacttaattctacctatgttcatgatctgtcagtggttgatcttcattcaaaccagcttcagggacatttccccttgttcttcagcagtaggtatctagattattcaagaaataatttcagctctagtataccgactaacattggtgacttcatttttactcggtcttacctttctctttcaagcaataacttccacggggccattccaaaatcaatatgcaacgcaagtggtcgggttcttgatctgtccaataattccttgagtggaaacattccccaatgcttgactcaatcacctcagctttcggtcattgatttgaagagaaacaacctgagtggcacaattccagataattttctcagcggttgtgagctacaaactctagacctcagtaacaatcaaatacaaggccagtttccgaaatctcttgtcaactgctcaagtttaggggttttaaatctcggaaacaatcagataacagatacttttccatgctttttaatgagcttatctaccttgcgtgtccttgttttgctgtccaacaagttttatggaagcattggatgtcctaagaccaatggcacatggcctgtgcttcaaataataaatttagctcacaacaatttcagcggtgatatgccaggaagattgtctctgacatggcaggctatggtgtctaatgaggatgattcttcaactaaccttggattttctgatcagccgtgcaagaataagctattttatatggctgataaatcttgtcttttgaatagtttttttcaaagaggttttgtttattattatagagatgcaattacgactatcatcaaaggtttggagttggattttgttaagattctaactacattcaccttgattgactactcctccaacaaattcaacggatcaatacctgaggaaattggagagttgaaatcactatatttcctcaatttatccggtaatgctttcaccggaaacatcccatcatcatttggtaagatgcggaaattgcagtccttagacctctcacagaaccacctgagcggccaaattccaccgcagcttgcaactctcaccttcctttcgtccttggatgtctcatataatcaactgacgggaaggatcccaaccggcactcaattttcaacatttccaaatacctccttcgagggtaacaaaggattatgggggcctcctctgacatgggatacagcaatcgtattgccacctccaaaggttaatggaagctcaagtaatccgaattctggagatgagattgattggaatattatcagtgctgaaattggatttacatgtgggtttggaattgccgtcggatcacttttgttttgcaagagatggaggaaatggtattacagagctatgtttaacatcctgttcaagatattccctcagctggaacacagatttgatcaagaattgatgagtgatggtgattcatgtccggccagatttagtgccactgttaatgctgctcctagtgcagctgctaataccgagaatgagaatagagaagaacaagctaatgtggcaatttggtttggcaacaaggtgcttgaaatggctacagccacctacccacctccaccaccgtattataagctatacacagattacttgcaagatcccaaatccgctcctgagccgctgccaccaatcgaagggacatacgtttgctatggtgctaattacactacggatgacgtgcttccaaggttggaagaactgggggtgcgtcaactgtacccaaaaggcccaaataatggtacgtctacctccgggctagtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1177

Amino Acids

129.16

Weight (kDa)

5.03

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3342
Acc36I ACCTGC 1 cut(s) 570
AccB7I CCANNNNNTGG 2 cut(s) 512, 3506
AccBSI CCGCTC 2 cut(s) 2766, 3380
AccI GTMKAC 2 cut(s) 1846, 3515
AciI CCGC 7 cut(s) 2082, 2349, 2725, 2766, 2780, 3378, 3389
AclWI GGATC 7 cut(s) 519, 637, 2632, 2839, 2852, 3067, 3362
AcoI YGGCCR 2 cut(s) 2767, 3189
AcsI RAATTY 6 cut(s) 115, 500, 2326, 2615, 2772, 2983
AcuI CTGAAG 7 cut(s) 884, 1028, 1172, 1316, 1505, 1760, 1783
AfaI GTAC 3 cut(s) 77, 3488, 3511
AfiI CCNNNNNNNGG 8 cut(s) 119, 512, 837, 1777, 2987, 3139, 3404, 3506
AflII CTTAAG 1 cut(s) 584
AflIII ACRYGT 1 cut(s) 3035
AhdI GACNNNNNGTC 4 cut(s) 901, 1045, 1189, 1333
AjiI CACGTC 1 cut(s) 3448
AjnI CCWGG 2 cut(s) 672, 2359
AjuI GAANNNNNNNTTGG 2 cut(s) 417, 449
Alw26I GTCTC 8 cut(s) 78, 522, 950, 1094, 1238, 1382, 2376, 2824
AlwI GGATC 7 cut(s) 519, 637, 2632, 2839, 2852, 3067, 3362
AoxI GGCC 9 cut(s) 268, 460, 1917, 2128, 2306, 2767, 2912, 3189, 3496
ApeKI GCWGC 5 cut(s) 2782, 3215, 3227, 3230, 3391
ApoI RAATTY 6 cut(s) 115, 500, 2326, 2615, 2772, 2983
ArsI GACNNNNNNTTYG 2 cut(s) 500, 532
AspS9I GGNCC 9 cut(s) 269, 895, 1039, 1183, 1327, 1606, 1917, 2912, 3497
AsuC2I CCSGG 2 cut(s) 685, 3523
AvaII GGWCC 5 cut(s) 895, 1039, 1183, 1327, 1606
AxyI CCTNAGG 2 cut(s) 25, 2634
BamHI GGATCC 1 cut(s) 2844
BarI GAAGNNNNNNTAC 2 cut(s) 1701, 1733
BbvCI CCTCAGC 2 cut(s) 2016, 3135
BbvI GCAGC 5 cut(s) 2794, 3202, 3217, 3239, 3378
BccI CCATC 4 cut(s) 533, 2713, 3075, 3167
BceAI ACGGC 2 cut(s) 2425, 3038
BciT130I CCWGG 2 cut(s) 674, 2361
BciVI GTATCC 2 cut(s) 1508, 2923
BclI TGATCA 2 cut(s) 2434, 3154
BcnI CCSGG 2 cut(s) 685, 3523
BcoDI GTCTC 8 cut(s) 78, 522, 950, 1094, 1238, 1382, 2376, 2824
BfaI CTAG 9 cut(s) 995, 1139, 1283, 1427, 1814, 1842, 2102, 3222, 3527
BfmI CTRYAG 1 cut(s) 3309
BfrI CTTAAG 1 cut(s) 584
BfuAI ACCTGC 1 cut(s) 570
BfuI GTATCC 2 cut(s) 1508, 2923
BglII AGATCT 1 cut(s) 429
BisI GCNGC 7 cut(s) 2767, 2783, 3216, 3228, 3231, 3389, 3392
BlsI GCNGC 7 cut(s) 2768, 2784, 3217, 3229, 3232, 3390, 3393
Bme1390I CCNGG 4 cut(s) 674, 685, 2361, 3523
Bme18I GGWCC 5 cut(s) 895, 1039, 1183, 1327, 1606
BmeRI GACNNNNNGTC 4 cut(s) 901, 1045, 1189, 1333
BmgBI CACGTC 1 cut(s) 3448
BmgT120I GGNCC 9 cut(s) 269, 895, 1039, 1183, 1327, 1606, 1917, 2912, 3497
BmiI GGNNCC 5 cut(s) 348, 490, 1918, 2846, 2913
BmrFI CCNGG 4 cut(s) 674, 685, 2361, 3523
BmrI ACTGGG 2 cut(s) 730, 3479
BmsI GCATC 2 cut(s) 2518, 2712
BmuI ACTGGG 2 cut(s) 730, 3479
BpmI CTGGAG 2 cut(s) 1490, 3009
Bpu10I CCTNAGC 4 cut(s) 2016, 2762, 3135, 3384
BpuEI CTTGAG 6 cut(s) 65, 125, 1597, 1999, 2143, 2956
BpuMI CCSGG 2 cut(s) 685, 3523
BsaI GGTCTC 2 cut(s) 78, 522
BsaJI CCNNGG 9 cut(s) 984, 1128, 1272, 1416, 1695, 1912, 2422, 2811, 3455
BsaWI WCCGGW 3 cut(s) 343, 2678, 2693
BsaXI ACNNNNNCTCC 2 cut(s) 2591, 2621
Bsc4I CCNNNNNNNGG 8 cut(s) 119, 512, 837, 1777, 2987, 3139, 3404, 3506
Bse118I RCCGGY 1 cut(s) 2852
Bse1I ACTGG 6 cut(s) 73, 203, 725, 816, 2131, 3474
Bse21I CCTNAGG 2 cut(s) 25, 2634
BseBI CCWGG 2 cut(s) 674, 2361
BseDI CCNNGG 9 cut(s) 984, 1128, 1272, 1416, 1695, 1912, 2422, 2811, 3455
BseGI GGATG 6 cut(s) 2288, 2410, 2700, 2821, 3114, 3448
BseLI CCNNNNNNNGG 8 cut(s) 119, 512, 837, 1777, 2987, 3139, 3404, 3506
BseNI ACTGG 6 cut(s) 73, 203, 725, 816, 2131, 3474
BseRI GAGGAG 8 cut(s) 849, 993, 1137, 1281, 1425, 1704, 2596, 2907
BseXI GCAGC 5 cut(s) 2794, 3202, 3217, 3239, 3378
BsgI GTGCAG 1 cut(s) 3246
BshFI GGCC 9 cut(s) 270, 462, 1919, 2130, 2308, 2769, 2914, 3191, 3498
BsiSI CCGG 7 cut(s) 344, 684, 2679, 2694, 2853, 3188, 3522
BslFI GGGAC 6 cut(s) 268, 556, 687, 790, 1794, 3421
BslI CCNNNNNNNGG 8 cut(s) 119, 512, 837, 1777, 2987, 3139, 3404, 3506
BsmAI GTCTC 8 cut(s) 78, 522, 950, 1094, 1238, 1382, 2376, 2824
BsmFI GGGAC 6 cut(s) 268, 556, 687, 790, 1794, 3421
BsnI GGCC 9 cut(s) 270, 462, 1919, 2130, 2308, 2769, 2914, 3191, 3498
Bso31I GGTCTC 2 cut(s) 78, 522
BspACI CCGC 7 cut(s) 2082, 2349, 2725, 2766, 2780, 3378, 3389
BspANI GGCC 9 cut(s) 270, 462, 1919, 2130, 2308, 2769, 2914, 3191, 3498
BspHI TCATGA 1 cut(s) 1738
BspLI GGNNCC 5 cut(s) 348, 490, 1918, 2846, 2913
BspMI ACCTGC 1 cut(s) 570
BspPI GGATC 7 cut(s) 519, 637, 2632, 2839, 2852, 3067, 3362
BspTI CTTAAG 1 cut(s) 584
BspTNI GGTCTC 2 cut(s) 78, 522
BsrBI CCGCTC 2 cut(s) 2766, 3380
BsrFI RCCGGY 1 cut(s) 2852
BsrI ACTGG 6 cut(s) 73, 203, 725, 816, 2131, 3474
BssAI RCCGGY 1 cut(s) 2852
BssECI CCNNGG 9 cut(s) 984, 1128, 1272, 1416, 1695, 1912, 2422, 2811, 3455
BssNAI GTATAC 1 cut(s) 1847
BssT1I CCWWGG 8 cut(s) 984, 1128, 1272, 1416, 1695, 2422, 2811, 3455
Bst1107I GTATAC 1 cut(s) 1847
Bst2UI CCWGG 2 cut(s) 674, 2361
Bst4CI ACNGT 4 cut(s) 820, 3208, 3336, 3486
Bst6I CTCTTC 9 cut(s) 525, 807, 867, 1011, 1155, 1299, 1443, 1671, 2033
BstAFI CTTAAG 1 cut(s) 584
BstC8I GCNNGC 2 cut(s) 2385, 2787
BstDSI CCRYGG 1 cut(s) 1912
BstEII GGTNACC 1 cut(s) 557
BstF5I GGATG 6 cut(s) 2288, 2410, 2700, 2821, 3114, 3448
BstMAI GTCTC 8 cut(s) 78, 522, 950, 1094, 1238, 1382, 2376, 2824
BstMWI GCNNNNNNNGC 3 cut(s) 2731, 3224, 3272
BstNI CCWGG 2 cut(s) 674, 2361
BstNSI RCATGY 1 cut(s) 3039
BstPI GGTNACC 1 cut(s) 557
BstSCI CCNGG 4 cut(s) 672, 683, 2359, 3521
BstSFI CTRYAG 1 cut(s) 3309
BstV1I GCAGC 5 cut(s) 2794, 3202, 3217, 3239, 3378
BstX2I RGATCY 3 cut(s) 429, 2844, 3367
BstYI RGATCY 3 cut(s) 429, 2844, 3367
BstZ17I GTATAC 1 cut(s) 1847
Bsu36I CCTNAGG 2 cut(s) 25, 2634
BsuI GTATCC 2 cut(s) 1508, 2923
BsuRI GGCC 9 cut(s) 270, 462, 1919, 2130, 2308, 2769, 2914, 3191, 3498
BtgI CCRYGG 1 cut(s) 1912
BtrI CACGTC 1 cut(s) 3448
BtsCI GGATG 6 cut(s) 2288, 2410, 2700, 2821, 3114, 3448
BtsI GCAGTG 2 cut(s) 63, 221
BtsIMutI CAGTG 6 cut(s) 63, 221, 718, 1755, 3022, 3204
BveI ACCTGC 1 cut(s) 570
Cac8I GCNNGC 2 cut(s) 2385, 2787
CciI TCATGA 1 cut(s) 1738
Cfr10I RCCGGY 1 cut(s) 2852
Cfr13I GGNCC 9 cut(s) 269, 895, 1039, 1183, 1327, 1606, 1917, 2912, 3497
CseI GACGC 1 cut(s) 3467
Csp6I GTAC 3 cut(s) 76, 3487, 3510
CspCI CAANNNNNGTGG 4 cut(s) 1927, 1962, 2035, 2070
CviAII CATG 8 cut(s) 485, 1739, 2211, 2304, 2379, 2925, 3036, 3183
CviQI GTAC 3 cut(s) 76, 3487, 3510
DraI TTTAAA 1 cut(s) 2175
DriI GACNNNNNGTC 4 cut(s) 901, 1045, 1189, 1333
EaeI YGGCCR 2 cut(s) 2767, 3189
Eam1104I CTCTTC 9 cut(s) 525, 807, 867, 1011, 1155, 1299, 1443, 1671, 2033
Eam1105I GACNNNNNGTC 4 cut(s) 901, 1045, 1189, 1333
EarI CTCTTC 9 cut(s) 525, 807, 867, 1011, 1155, 1299, 1443, 1671, 2033
Eco130I CCWWGG 8 cut(s) 984, 1128, 1272, 1416, 1695, 2422, 2811, 3455
Eco31I GGTCTC 2 cut(s) 78, 522
Eco32I GATATC 1 cut(s) 180
Eco47I GGWCC 5 cut(s) 895, 1039, 1183, 1327, 1606
Eco57I CTGAAG 7 cut(s) 884, 1028, 1172, 1316, 1505, 1760, 1783
Eco81I CCTNAGG 2 cut(s) 25, 2634
Eco91I GGTNACC 1 cut(s) 557
EcoO109I RGGNCCY 2 cut(s) 269, 2912
EcoO65I GGTNACC 1 cut(s) 557
EcoRI GAATTC 1 cut(s) 2983
EcoRII CCWGG 2 cut(s) 672, 2359
EcoRV GATATC 1 cut(s) 180
EcoT14I CCWWGG 8 cut(s) 984, 1128, 1272, 1416, 1695, 2422, 2811, 3455
ErhI CCWWGG 8 cut(s) 984, 1128, 1272, 1416, 1695, 2422, 2811, 3455
FaeI CATG 8 cut(s) 488, 1742, 2214, 2307, 2382, 2928, 3039, 3186
FaqI GGGAC 6 cut(s) 268, 556, 687, 790, 1794, 3421
FatI CATG 8 cut(s) 484, 1738, 2210, 2303, 2378, 2924, 3035, 3182
FbaI TGATCA 2 cut(s) 2434, 3154
FblI GTMKAC 2 cut(s) 1846, 3515
Fnu4HI GCNGC 7 cut(s) 2767, 2783, 3216, 3228, 3231, 3389, 3392
FokI GGATG 6 cut(s) 2295, 2417, 2687, 2828, 3101, 3455
Fsp4HI GCNGC 7 cut(s) 2767, 2783, 3216, 3228, 3231, 3389, 3392
FspBI CTAG 9 cut(s) 995, 1139, 1283, 1427, 1814, 1842, 2102, 3222, 3527
GluI GCNGC 7 cut(s) 2767, 2783, 3216, 3228, 3231, 3389, 3392
GsuI CTGGAG 2 cut(s) 1490, 3009
HaeIII GGCC 9 cut(s) 270, 462, 1919, 2130, 2308, 2769, 2914, 3191, 3498
HapII CCGG 7 cut(s) 344, 684, 2679, 2694, 2853, 3188, 3522
HgaI GACGC 1 cut(s) 3467
Hin1II CATG 8 cut(s) 488, 1742, 2214, 2307, 2382, 2928, 3039, 3186
HincII GTYRAC 3 cut(s) 1557, 2152, 3482
HindII GTYRAC 3 cut(s) 1557, 2152, 3482
HindIII AAGCTT 5 cut(s) 293, 911, 1055, 1199, 1343
HpaII CCGG 7 cut(s) 344, 684, 2679, 2694, 2853, 3188, 3522
Hpy166II GTNNAC 5 cut(s) 1557, 1847, 2152, 3482, 3516
Hpy8I GTNNAC 5 cut(s) 1557, 1847, 2152, 3482, 3516
Hpy99I CGWCG 1 cut(s) 3059
HpyCH4III ACNGT 4 cut(s) 820, 3208, 3336, 3486
HpyCH4IV ACGT 3 cut(s) 3414, 3447, 3512
HpyF10VI GCNNNNNNNGC 3 cut(s) 2731, 3224, 3272
HpySE526I ACGT 3 cut(s) 3414, 3447, 3512
Hsp92II CATG 8 cut(s) 488, 1742, 2214, 2307, 2382, 2928, 3039, 3186
Ksp22I TGATCA 2 cut(s) 2434, 3154
Lsp1109I GCAGC 5 cut(s) 2794, 3202, 3217, 3239, 3378
LweI GCATC 2 cut(s) 2518, 2712
MaeI CTAG 9 cut(s) 995, 1139, 1283, 1427, 1814, 1842, 2102, 3222, 3527
MaeII ACGT 3 cut(s) 3414, 3447, 3512
MbiI CCGCTC 2 cut(s) 2766, 3380
MfeI CAATTG 1 cut(s) 1642
MflI RGATCY 3 cut(s) 429, 2844, 3367
MspA1I CMGCKG 5 cut(s) 2082, 2349, 3139, 3230, 3391
MspCI CTTAAG 1 cut(s) 584
MspI CCGG 7 cut(s) 344, 684, 2679, 2694, 2853, 3188, 3522
MspR9I CCNGG 4 cut(s) 674, 685, 2361, 3523
MunI CAATTG 1 cut(s) 1642
MvaI CCWGG 2 cut(s) 674, 2361
MwoI GCNNNNNNNGC 3 cut(s) 2731, 3224, 3272
NciI CCSGG 2 cut(s) 685, 3523
NlaIII CATG 8 cut(s) 488, 1742, 2214, 2307, 2382, 2928, 3039, 3186
NlaIV GGNNCC 5 cut(s) 348, 490, 1918, 2846, 2913
NmuCI GTSAC 7 cut(s) 194, 557, 988, 1132, 1276, 1420, 1862
NspI RCATGY 1 cut(s) 3039
PagI TCATGA 1 cut(s) 1738
PciI ACATGT 1 cut(s) 3035
PfeI GAWTC 8 cut(s) 167, 354, 1563, 1624, 1661, 2408, 2575, 3179
PflMI CCANNNNNTGG 2 cut(s) 512, 3506
PfoI TCCNGGA 1 cut(s) 683
PkrI GCNGC 7 cut(s) 2768, 2784, 3217, 3229, 3232, 3390, 3393
PscI ACATGT 1 cut(s) 3035
PsiI TTATAA 1 cut(s) 3342
Psp6I CCWGG 2 cut(s) 672, 2359
PspEI GGTNACC 1 cut(s) 557
PspGI CCWGG 2 cut(s) 672, 2359
PspN4I GGNNCC 5 cut(s) 348, 490, 1918, 2846, 2913
PspPI GGNCC 9 cut(s) 269, 895, 1039, 1183, 1327, 1606, 1917, 2912, 3497
PsuI RGATCY 3 cut(s) 429, 2844, 3367
PvuII CAGCTG 2 cut(s) 3139, 3230
RsaI GTAC 3 cut(s) 77, 3488, 3511
RsaNI GTAC 3 cut(s) 76, 3487, 3510
SatI GCNGC 7 cut(s) 2767, 2783, 3216, 3228, 3231, 3389, 3392
Sau96I GGNCC 9 cut(s) 269, 895, 1039, 1183, 1327, 1606, 1917, 2912, 3497
ScrFI CCNGG 4 cut(s) 674, 685, 2361, 3523
SfaNI GCATC 2 cut(s) 2518, 2712
SfcI CTRYAG 1 cut(s) 3309
SinI GGWCC 5 cut(s) 895, 1039, 1183, 1327, 1606
SmlI CTYRAG 7 cut(s) 44, 104, 584, 1576, 1978, 2158, 2971
SmoI CTYRAG 7 cut(s) 44, 104, 584, 1576, 1978, 2158, 2971
SsiI CCGC 7 cut(s) 2082, 2349, 2725, 2766, 2780, 3378, 3389
SspI AATATT 1 cut(s) 3010
SspMI CTAG 9 cut(s) 995, 1139, 1283, 1427, 1814, 1842, 2102, 3222, 3527
StyD4I CCNGG 4 cut(s) 672, 683, 2359, 3521
StyI CCWWGG 8 cut(s) 984, 1128, 1272, 1416, 1695, 2422, 2811, 3455
TaaI ACNGT 4 cut(s) 820, 3208, 3336, 3486
TaiI ACGT 3 cut(s) 3417, 3450, 3515
TaqI TCGA 6 cut(s) 53, 523, 644, 750, 2889, 3402
TaqII GACCGA 2 cut(s) 1869, 2014
TauI GCSGC 2 cut(s) 2769, 3391
TfiI GAWTC 8 cut(s) 167, 354, 1563, 1624, 1661, 2408, 2575, 3179
TscAI CASTG 6 cut(s) 70, 228, 725, 1755, 3022, 3211
TseFI GTSAC 7 cut(s) 194, 557, 988, 1132, 1276, 1420, 1862
TseI GCWGC 5 cut(s) 2782, 3215, 3227, 3230, 3391
Tsp45I GTSAC 7 cut(s) 194, 557, 988, 1132, 1276, 1420, 1862
TspDTI ATGAA 7 cut(s) 473, 777, 1466, 1727, 1751, 1858, 3171
TspGWI ACGGA 2 cut(s) 2637, 3455
TspRI CASTG 6 cut(s) 70, 228, 725, 1755, 3022, 3211
Van91I CCANNNNNTGG 2 cut(s) 512, 3506
Vha464I CTTAAG 1 cut(s) 584
VpaK11BI GGWCC 5 cut(s) 895, 1039, 1183, 1327, 1606
XapI RAATTY 6 cut(s) 115, 500, 2326, 2615, 2772, 2983
XbaI TCTAGA 6 cut(s) 994, 1138, 1282, 1426, 1813, 2101
XceI RCATGY 1 cut(s) 3039
XmiI GTMKAC 2 cut(s) 1846, 3515
XspI CTAG 9 cut(s) 995, 1139, 1283, 1427, 1814, 1842, 2102, 3222, 3527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.