FvH4_6g11081

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Reverse (-)
6627821 .. 6631386
3566 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g11081.t1

Sequence Viewer

Length: 3222 bp
ATGAGAATTCCATTTCTTCCATGGGTTTTCTCGATACTCTTTTGCTATTTTCTACTGATCCATATAGTTGTGGTCTCTGGCCAATGTGCCAGCAACCAGCAGCAAGCTTTGCTGCTCCAATTGAAGAACAGCCTCAGTTTTAACTCTGAATTATCCACAAAACTTGTGAGGTGGAGTAATGCTTCAGATTACTGTTCTTGGGAAGGTGTGTCCTGCAAGCAGGGTTGTGTTACCCAACTTGACTTGAGTAACGAATCGATTTCGGATGGACTTGATGATTCAAGTGCTCTTTTCAGTCTGCAATACATTGAGAACCTGAATTTGGCTTTCAATAACTTCAATTATACTCAAATTCCATCGGAGTTCAACAAGCTAGCCAGTTTGAGTTACTTGAATCTGTCCAATGCTGGCTTTGCTGGGCAGATTCCCATTGAGATTTCGCACTTGACAAGGTTGGTATTTCTTGATTTATCTACCATTTCCTTTCTCGGAGTTACTGCACTTCAACTTGAGCATCCAAATTTGAATCAGCTCATTGGAAACCTTTCGGAGATAACAGAACTTCATCTTGATGGTGTGAACATATCAGCACCGGGACCTCGGTGGTGTCAAGCACTATCATCTTCGTTGCCAAAGTTGAGGGTGCTGAGCTTGTCCAGCTGCAATATTTTGGGACCTATTGATGATTCATTGTTGAAGCTCAACTCACTCTCATTCATTCGCCTGGACTGGAATGACTTGTCTGCTTCAGTTCCAGAGTTCTTGTCAAATTTCACAAATTTGACTTCCTTACGTCTCATGAATTCAGGGTTACACGGTACATTCCCAAAGAAGATCTTTCAGGTACCTACACTGCAGATTATCGACTTAATTGGCAATCAAGAGCTACAAGGTACGTTGCCAGACTTCCCGAAGAATGGAGCTCTACAGTCCCTGTTCCTAGCCAGGACAAATTTTTCAGGGTCATTGTCTGAATCTATTGGAAACCTGAAGATGTTGTCCAGAGTGGATCTTTCATACTGCAATTTCACCGGACCAATCCCAAGGTCAATGGAAAGCCTCACGGAACTGGTTTATGTGGACATGTCTAAGAACAAGTTCAATGGTTCAGTTCCAGTCTTGAGTATGGCCAAGAATATGACCGATATAGATCTTTCTTACAATGAGCTAACAGGTCAGGTCAACTCTACTCAGTGGCAAAATCTTATAAAGCTGGTCAATCTCAACTTGGGTAATAATGAACTGGAGGGCAGTATTCCATTGTCTCTATTTCATCTTCCCTCACTGAAGCAACTGGTGCTCTCCAACAATCAATTTTCTGGTCAGTTGCTTGAATTTCCCAATGTATCTTCTAACCCTCTTGTTACACTTGATTTAAGTAGCAACAACTTGGAAGGACCAGTACCCAGGTCTATCTTCAATCTCCTAGAGCTTACAATTCTTGCACTTTCTTCAAACAACTTCAGTGGCTCCTTCCCTCTCAACAGTGTCCAACAGCTCAAAAATCTTTCGAGTATTGATCTTTCATATAATAGTTTGTTGATTAGTTATGATAGCATCAATTCCTCCCAGCCTTCCTTTCCTCAAATTACCACATTGAAGTTGGCTTCTGGCAAGTTGAGAACATTCCCTGATTTCTTGAGAAATCAATCCAGATTAAGCACTTTAGATCTTTCACAAAACCAGATTCATGGAGAGATACCCAACTGGGTTTGGAAGCTCAGCAGTCTTTCTCAGCTAAATCTTTCTTGCAATTCCCTGGTTACTCTAGAAGGTCCATTATCCAATCTTACATCTCATTTGTCTGTGGTTGACCTTCATTCAAACCAGCTTCAGGGAAAACTGCCAATTTTTCGACCAAGTGCCACTTATCTGGACTACTCCAGAAATAATTTCAGCTCTACAATACCGGATGACATTGGTGATTTCTTTAATTACATGGTGTTCTTGTCTCTTTCAAGCAACAACTTAACCGGTAGCATTCCAGTATCAATATGCAATGGTGTAAATCTGCAGGTTCTTGATCTGTCCAATAATTCTTTGAGTGGCTACATTCCCCAGTGCTTGACTGCATTAAGTGGAAACCTTGTAGTACTTAATTTGAGGAGAAACAAACTTGCTGGGACTATTCCTGACAGATTTCCTGGCCATTGTAGTCTAAAAACTCTAGACTTCAATAAAAATCGTCTAGAAGGTAAGTTCCCAAGATCTCTAGCCAATTGCACAGCGTTGGAAGTTCTGAACCTTGGAAACAATCAGTTAACAGATACATTTCCATTCTTGTTGAAGAGCATCTCCACCTTGCGTGTCCTTGTTTTGCGATCAAACAGATTTTATAACCGCATTGGATGTTCCAACACCACTGGTACCTGGCCAATGCTTCAGATTGTTGACATAGCACACAACAACTTTAGTGGTGAAATACCGGGAAGATGCTTGACTACATGGCAGGCAATGACAGGCAACGAAGATGATGCCCAGTCAAAGATCAATCACCTGCAATTTGGAGTTCTACCATTCAGTGACTTAAATTATGAGGATGCTATAGCAGTTACCACCAAAGGAGTAGAAATGGAGTTGGTCAAGATTCTAACTGTTTTCACCTCTATTGACATCTCGTGCAACAATTTCAATGGACCAATACCGGCGCAAGTGGGACAACTAAAAGCACTCTATGCCCTCAACTTGTCCAATAATGCTCTCACAGGCCCTATCCCTCCATCATTGGGTAACCTGAGACAACTAGAGTCCTTGGACCTTTCGAACAACAGCCTCAGTGGGCCAATTCCACAAATGCTTACTGCACTTACTTTCCTTTCATTCTTGAATCTCTCATATAACCAATTGTCTGGAACGATACCAATTGGTAATCAGTTTTCGACATTTGATTCATCTTCCTATGAAGATAATGAAGGATTATGTGGCGCACCTTTACTTGTAAAATGCAGTAATTCCAGCGAGCCACCAGATGCACCATCCAAGGTCGAAAACAAAGAGTCAGGAATTGGGTTGTACTATATTATCGGTGTTGAAAGTGGATTTACATGTGGGTTTGGAATTGCCATTGCATCACTTTTGTTTTGCAAGAGATGGAGTTTATGGTATTACAGAACAATGCGAAGCATCCTATTCAAGATATTCCCTCAGCTGGAAGAAAGATTTGGTGATCACAGAAGGCATGTTTACGTAAATCCAAGCTGGAGGAGTTGGAAACGATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1074

Amino Acids

118.66

Weight (kDa)

5.86

Isoelectric Point (pI)

36.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 72 5.4e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 528 - 587 6.9e-06 Leucine rich repeat
LRR_8 PF13855 695 - 754 5.3e-08 Leucine rich repeat
LRR_4 PF12799 719 - 757 3.7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 868 - 925 1.4e-06 Leucine rich repeat
LRR_8 PF13855 891 - 949 4.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1208, 2337
AarI CACCTGC 1 cut(s) 2505
Acc36I ACCTGC 2 cut(s) 2005, 2505
Acc65I GGTACC 2 cut(s) 844, 2366
AccB1I GGYRCC 2 cut(s) 844, 2366
AciI CCGC 1 cut(s) 2341
AclWI GGATC 2 cut(s) 52, 1017
AcoI YGGCCR 4 cut(s) 79, 1128, 2146, 2372
AcsI RAATTY 9 cut(s) 6, 319, 351, 520, 769, 778, 802, 952, 1334
AcuI CTGAAG 7 cut(s) 168, 732, 1010, 1307, 1447, 1817, 2366
AfaI GTAC 7 cut(s) 820, 846, 895, 1404, 2094, 2368, 3014
AfiI CCNNNNNNNGG 5 cut(s) 322, 917, 1834, 2726, 3148
AflIII ACRYGT 2 cut(s) 1083, 3044
AgeI ACCGGT 1 cut(s) 1973
AjnI CCWGG 6 cut(s) 723, 944, 1406, 1758, 2143, 2369
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 3144, 3176
Alw21I GWGCWC 3 cut(s) 289, 925, 1302
Alw26I GTCTC 5 cut(s) 79, 800, 1269, 1956, 2731
AlwI GGATC 2 cut(s) 52, 1017
AlwNI CAGNNNCTG 1 cut(s) 934
AoxI GGCC 6 cut(s) 79, 1128, 2146, 2372, 2707, 2780
ApeKI GCWGC 3 cut(s) 100, 112, 660
ApoI RAATTY 9 cut(s) 6, 319, 351, 520, 769, 778, 802, 952, 1334
AsiGI ACCGGT 1 cut(s) 1973
Asp700I GAANNNNTTC 2 cut(s) 544, 1097
Asp718I GGTACC 2 cut(s) 844, 2366
AspLEI GCGC 2 cut(s) 2650, 2927
AspS9I GGNCC 9 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2708, 2755, 2780
AsuC2I CCSGG 2 cut(s) 594, 2427
AsuHPI GGTGA 6 cut(s) 1021, 1934, 2429, 2486, 2593, 3176
AsuII TTCGAA 1 cut(s) 2762
AsuNHI GCTAGC 1 cut(s) 373
AvaII GGWCC 7 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2755
BalI TGGCCA 4 cut(s) 81, 1130, 2148, 2374
BanI GGYRCC 2 cut(s) 844, 2366
BanII GRGCYC 1 cut(s) 925
BarI GAAGNNNNNNTAC 2 cut(s) 1386, 1418
BauI CACGAG 1 cut(s) 2617
Bbv12I GWGCWC 3 cut(s) 289, 925, 1302
BbvCI CCTCAGC 1 cut(s) 3144
BbvI GCAGC 3 cut(s) 99, 112, 647
BccI CCATC 6 cut(s) 260, 364, 566, 2728, 2983, 3084
BcgI CGANNNNNNTGC 2 cut(s) 2456, 2490
BciT130I CCWGG 6 cut(s) 725, 946, 1408, 1760, 2145, 2371
BclI TGATCA 1 cut(s) 3166
BcnI CCSGG 2 cut(s) 594, 2427
BcoDI GTCTC 5 cut(s) 79, 800, 1269, 1956, 2731
BfaI CTAG 8 cut(s) 374, 941, 1427, 1769, 2168, 2189, 2213, 2744
BfmI CTRYAG 4 cut(s) 854, 926, 2012, 2544
BfuAI ACCTGC 2 cut(s) 2005, 2505
BglII AGATCT 4 cut(s) 834, 1150, 1669, 2207
BisI GCNGC 3 cut(s) 101, 113, 661
BlpI GCTNAGC 2 cut(s) 647, 1721
BlsI GCNGC 3 cut(s) 102, 114, 662
BmcAI AGTACT 1 cut(s) 2094
Bme1390I CCNGG 8 cut(s) 594, 725, 946, 1408, 1760, 2145, 2371, 2427
Bme18I GGWCC 7 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2755
BmgT120I GGNCC 9 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2708, 2755, 2780
BmiI GGNNCC 5 cut(s) 597, 675, 846, 1471, 2368
BmrFI CCNGG 8 cut(s) 594, 725, 946, 1408, 1760, 2145, 2371, 2427
BmrI ACTGGG 3 cut(s) 1717, 2053, 2473
BmsI GCATC 9 cut(s) 523, 1566, 2301, 2423, 2464, 2530, 2959, 3077, 3132
BmtI GCTAGC 1 cut(s) 377
BmuI ACTGGG 3 cut(s) 1717, 2053, 2473
BpmI CTGGAG 3 cut(s) 1265, 1867, 3220
Bpu10I CCTNAGC 1 cut(s) 3144
Bpu1102I GCTNAGC 2 cut(s) 647, 1721
Bpu14I TTCGAA 1 cut(s) 2762
BpuEI CTTGAG 4 cut(s) 265, 530, 1141, 1660
BpuMI CCSGG 2 cut(s) 594, 2427
Bsa29I ATCGAT 1 cut(s) 257
BsaAI YACGTR 1 cut(s) 3187
BsaBI GATNNNNATC 1 cut(s) 1149
BsaI GGTCTC 1 cut(s) 79
BsaJI CCNNGG 8 cut(s) 20, 599, 1043, 1406, 1758, 2245, 2751, 2979
BsaWI WCCGGW 3 cut(s) 1031, 1909, 1973
Bsc4I CCNNNNNNNGG 5 cut(s) 322, 917, 1834, 2726, 3148
Bse118I RCCGGY 2 cut(s) 1973, 2644
Bse3DI GCAATG 3 cut(s) 2005, 2460, 3063
Bse8I GATNNNNATC 1 cut(s) 1149
BseBI CCWGG 6 cut(s) 725, 946, 1408, 1760, 2145, 2371
BseCI ATCGAT 1 cut(s) 257
BseDI CCNNGG 8 cut(s) 20, 599, 1043, 1406, 1758, 2245, 2751, 2979
BseGI GGATG 7 cut(s) 271, 514, 1918, 2354, 2545, 2975, 3123
BseJI GATNNNNATC 1 cut(s) 1149
BseLI CCNNNNNNNGG 5 cut(s) 322, 917, 1834, 2726, 3148
BseMI GCAATG 3 cut(s) 2005, 2460, 3063
BseMII CTCAG 8 cut(s) 148, 638, 1205, 1735, 1748, 2726, 2788, 3158
BseRI GAGGAG 2 cut(s) 2119, 3217
BseXI GCAGC 3 cut(s) 99, 112, 647
BseYI CCCAGC 3 cut(s) 416, 1569, 2120
BsgI GTGCAG 2 cut(s) 483, 2787
BshFI GGCC 6 cut(s) 81, 1130, 2148, 2374, 2709, 2782
BshNI GGYRCC 2 cut(s) 844, 2366
BshTI ACCGGT 1 cut(s) 1973
BshVI ATCGAT 1 cut(s) 257
BsiHKAI GWGCWC 3 cut(s) 289, 925, 1302
BsiSI CCGG 6 cut(s) 593, 1032, 1910, 1974, 2426, 2645
BslFI GGGAC 5 cut(s) 609, 687, 916, 2137, 2670
BslI CCNNNNNNNGG 5 cut(s) 322, 917, 1834, 2726, 3148
BsmAI GTCTC 5 cut(s) 79, 800, 1269, 1956, 2731
BsmBI CGTCTC 1 cut(s) 800
BsmFI GGGAC 5 cut(s) 609, 687, 916, 2137, 2670
BsmI GAATGC 1 cut(s) 1980
BsnI GGCC 6 cut(s) 81, 1130, 2148, 2374, 2709, 2782
Bso31I GGTCTC 1 cut(s) 79
Bsp119I TTCGAA 1 cut(s) 2762
Bsp1286I GDGCHC 3 cut(s) 289, 925, 1302
Bsp1720I GCTNAGC 2 cut(s) 647, 1721
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 1 cut(s) 2341
BspANI GGCC 6 cut(s) 81, 1130, 2148, 2374, 2709, 2782
BspCNI CTCAG 8 cut(s) 147, 639, 1204, 1734, 1747, 2727, 2787, 3157
BspDI ATCGAT 1 cut(s) 257
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 5 cut(s) 597, 675, 846, 1471, 2368
BspMAI CTGCAG 2 cut(s) 858, 2016
BspMI ACCTGC 2 cut(s) 2005, 2505
BspOI GCTAGC 1 cut(s) 377
BspPI GGATC 2 cut(s) 52, 1017
BspQI GCTCTTC 1 cut(s) 2282
BspT104I TTCGAA 1 cut(s) 2762
BspT107I GGYRCC 2 cut(s) 844, 2366
BspTNI GGTCTC 1 cut(s) 79
BsrDI GCAATG 3 cut(s) 2005, 2460, 3063
BsrFI RCCGGY 2 cut(s) 1973, 2644
BssAI RCCGGY 2 cut(s) 1973, 2644
BssECI CCNNGG 8 cut(s) 20, 599, 1043, 1406, 1758, 2245, 2751, 2979
BssSI CACGAG 1 cut(s) 2617
BssT1I CCWWGG 5 cut(s) 20, 1043, 2245, 2751, 2979
Bst2BI CACGAG 1 cut(s) 2617
Bst2UI CCWGG 6 cut(s) 725, 946, 1408, 1760, 2145, 2371
Bst4CI ACNGT 5 cut(s) 194, 818, 930, 1487, 2596
Bst6I CTCTTC 1 cut(s) 2282
BstAPI GCANNNNNTGC 3 cut(s) 109, 1297, 2675
BstBAI YACGTR 1 cut(s) 3187
BstBI TTCGAA 1 cut(s) 2762
BstC8I GCNNGC 7 cut(s) 91, 105, 218, 375, 409, 2451, 2960
BstDEI CTNAG 9 cut(s) 134, 647, 1089, 1191, 1721, 1734, 2735, 2774, 3144
BstDSI CCRYGG 1 cut(s) 20
BstEII GGTNACC 1 cut(s) 2729
BstF5I GGATG 7 cut(s) 271, 514, 1918, 2354, 2545, 2975, 3123
BstHHI GCGC 2 cut(s) 2650, 2927
BstMAI GTCTC 5 cut(s) 79, 800, 1269, 1956, 2731
BstMWI GCNNNNNNNGC 5 cut(s) 109, 413, 657, 1297, 2675
BstNI CCWGG 6 cut(s) 725, 946, 1408, 1760, 2145, 2371
BstNSI RCATGY 3 cut(s) 1087, 3048, 3182
BstPI GGTNACC 1 cut(s) 2729
BstSCI CCNGG 8 cut(s) 592, 723, 944, 1406, 1758, 2143, 2369, 2425
BstSFI CTRYAG 4 cut(s) 854, 926, 2012, 2544
BstSNI TACGTA 1 cut(s) 3187
BstV1I GCAGC 3 cut(s) 99, 112, 647
BstX2I RGATCY 5 cut(s) 834, 1009, 1150, 1669, 2207
BstXI CCANNNNNNTGG 3 cut(s) 1691, 1873, 2849
BstYI RGATCY 5 cut(s) 834, 1009, 1150, 1669, 2207
Bsu15I ATCGAT 1 cut(s) 257
BsuRI GGCC 6 cut(s) 81, 1130, 2148, 2374, 2709, 2782
BsuTUI ATCGAT 1 cut(s) 257
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 7 cut(s) 271, 514, 1918, 2354, 2545, 2975, 3123
BtsI GCAGTG 1 cut(s) 851
BtsIMutI CAGTG 9 cut(s) 851, 1199, 1283, 1471, 1492, 2066, 2361, 2527, 2782
BveI ACCTGC 2 cut(s) 2005, 2505
Cac8I GCNNGC 7 cut(s) 91, 105, 218, 375, 409, 2451, 2960
CaiI CAGNNNCTG 1 cut(s) 934
CciI TCATGA 1 cut(s) 798
CfoI GCGC 2 cut(s) 2650, 2927
Cfr10I RCCGGY 2 cut(s) 1973, 2644
Cfr13I GGNCC 9 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2708, 2755, 2780
ClaI ATCGAT 1 cut(s) 257
Csp6I GTAC 7 cut(s) 819, 845, 894, 1403, 2093, 2367, 3013
CspAI ACCGGT 1 cut(s) 1973
CspCI CAANNNNNGTGG 6 cut(s) 145, 180, 1447, 1482, 2395, 2430
CviAII CATG 8 cut(s) 21, 799, 1084, 1691, 1939, 2445, 3045, 3179
CviQI GTAC 7 cut(s) 819, 845, 894, 1403, 2093, 2367, 3013
DdeI CTNAG 9 cut(s) 134, 647, 1089, 1191, 1721, 1734, 2735, 2774, 3144
EaeI YGGCCR 4 cut(s) 79, 1128, 2146, 2372
Eam1104I CTCTTC 1 cut(s) 2282
EarI CTCTTC 1 cut(s) 2282
Ecl136II GAGCTC 1 cut(s) 923
Eco105I TACGTA 1 cut(s) 3187
Eco130I CCWWGG 5 cut(s) 20, 1043, 2245, 2751, 2979
Eco24I GRGCYC 1 cut(s) 925
Eco31I GGTCTC 1 cut(s) 79
Eco47I GGWCC 7 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2755
Eco53kI GAGCTC 1 cut(s) 923
Eco57I CTGAAG 7 cut(s) 168, 732, 1010, 1307, 1447, 1817, 2366
Eco91I GGTNACC 1 cut(s) 2729
EcoICRI GAGCTC 1 cut(s) 923
EcoO109I RGGNCCY 3 cut(s) 596, 674, 2708
EcoO65I GGTNACC 1 cut(s) 2729
EcoRI GAATTC 2 cut(s) 6, 802
EcoRII CCWGG 6 cut(s) 723, 944, 1406, 1758, 2143, 2369
EcoT14I CCWWGG 5 cut(s) 20, 1043, 2245, 2751, 2979
EcoT38I GRGCYC 1 cut(s) 925
ErhI CCWWGG 5 cut(s) 20, 1043, 2245, 2751, 2979
Esp3I CGTCTC 1 cut(s) 800
FaeI CATG 8 cut(s) 24, 802, 1087, 1694, 1942, 2448, 3048, 3182
FalI AAGNNNNNCTT 4 cut(s) 821, 853, 1852, 1884
FaqI GGGAC 5 cut(s) 609, 687, 916, 2137, 2670
FatI CATG 8 cut(s) 20, 798, 1083, 1690, 1938, 2444, 3044, 3178
FbaI TGATCA 1 cut(s) 3166
Fnu4HI GCNGC 3 cut(s) 101, 113, 661
FokI GGATG 7 cut(s) 278, 501, 1925, 2361, 2552, 2962, 3110
FriOI GRGCYC 1 cut(s) 925
Fsp4HI GCNGC 3 cut(s) 101, 113, 661
FspBI CTAG 8 cut(s) 374, 941, 1427, 1769, 2168, 2189, 2213, 2744
GlaI GCGC 2 cut(s) 2649, 2926
GluI GCNGC 3 cut(s) 101, 113, 661
GsaI CCCAGC 3 cut(s) 420, 1573, 2124
GsuI CTGGAG 3 cut(s) 1265, 1867, 3220
HaeIII GGCC 6 cut(s) 81, 1130, 2148, 2374, 2709, 2782
HapII CCGG 6 cut(s) 593, 1032, 1910, 1974, 2426, 2645
HhaI GCGC 2 cut(s) 2650, 2927
Hin1II CATG 8 cut(s) 24, 802, 1087, 1694, 1942, 2448, 3048, 3182
Hin6I GCGC 2 cut(s) 2648, 2925
HinP1I GCGC 2 cut(s) 2648, 2925
HincII GTYRAC 4 cut(s) 1183, 1813, 2262, 2392
HindII GTYRAC 4 cut(s) 1183, 1813, 2262, 2392
HindIII AAGCTT 1 cut(s) 105
HpaI GTTAAC 1 cut(s) 2262
HpaII CCGG 6 cut(s) 593, 1032, 1910, 1974, 2426, 2645
HphI GGTGA 6 cut(s) 1021, 1934, 2429, 2486, 2593, 3176
Hpy166II GTNNAC 7 cut(s) 580, 1081, 1183, 1813, 2262, 2392, 3184
Hpy188I TCNGA 9 cut(s) 148, 187, 265, 361, 491, 550, 973, 2241, 2385
Hpy8I GTNNAC 7 cut(s) 580, 1081, 1183, 1813, 2262, 2392, 3184
HpyAV CCTTC 9 cut(s) 197, 1388, 1483, 1584, 1766, 1826, 2186, 2906, 3168
HpyCH4III ACNGT 5 cut(s) 194, 818, 930, 1487, 2596
HpyCH4IV ACGT 3 cut(s) 793, 896, 3186
HpyF10VI GCNNNNNNNGC 5 cut(s) 109, 413, 657, 1297, 2675
HpyF3I CTNAG 9 cut(s) 134, 647, 1089, 1191, 1721, 1734, 2735, 2774, 3144
HpySE526I ACGT 3 cut(s) 793, 896, 3186
Hsp92II CATG 8 cut(s) 24, 802, 1087, 1694, 1942, 2448, 3048, 3182
HspAI GCGC 2 cut(s) 2648, 2925
KpnI GGTACC 2 cut(s) 848, 2370
Ksp22I TGATCA 1 cut(s) 3166
KspAI GTTAAC 1 cut(s) 2262
LguI GCTCTTC 1 cut(s) 2282
LmnI GCTCC 3 cut(s) 120, 920, 1475
Lsp1109I GCAGC 3 cut(s) 99, 112, 647
LweI GCATC 9 cut(s) 523, 1566, 2301, 2423, 2464, 2530, 2959, 3077, 3132
MaeI CTAG 8 cut(s) 374, 941, 1427, 1769, 2168, 2189, 2213, 2744
MaeII ACGT 3 cut(s) 793, 896, 3186
MfeI CAATTG 4 cut(s) 119, 2218, 2843, 2862
MflI RGATCY 5 cut(s) 834, 1009, 1150, 1669, 2207
MhlI GDGCHC 3 cut(s) 289, 925, 1302
MlsI TGGCCA 4 cut(s) 81, 1130, 2148, 2374
MluNI TGGCCA 4 cut(s) 81, 1130, 2148, 2374
MlyI GAGTC 2 cut(s) 2756, 3005
MmeI TCCRAC 5 cut(s) 1329, 1516, 2211, 2379, 3188
Mox20I TGGCCA 4 cut(s) 81, 1130, 2148, 2374
MroXI GAANNNNTTC 2 cut(s) 544, 1097
MscI TGGCCA 4 cut(s) 81, 1130, 2148, 2374
MslI CAYNNNNRTG 1 cut(s) 570
Msp20I TGGCCA 4 cut(s) 81, 1130, 2148, 2374
MspA1I CMGCKG 2 cut(s) 660, 3148
MspI CCGG 6 cut(s) 593, 1032, 1910, 1974, 2426, 2645
MspR9I CCNGG 8 cut(s) 594, 725, 946, 1408, 1760, 2145, 2371, 2427
MunI CAATTG 4 cut(s) 119, 2218, 2843, 2862
Mva1269I GAATGC 1 cut(s) 1980
MvaI CCWGG 6 cut(s) 725, 946, 1408, 1760, 2145, 2371
MwoI GCNNNNNNNGC 5 cut(s) 109, 413, 657, 1297, 2675
NciI CCSGG 2 cut(s) 594, 2427
NcoI CCATGG 1 cut(s) 20
NheI GCTAGC 1 cut(s) 373
NlaIII CATG 8 cut(s) 24, 802, 1087, 1694, 1942, 2448, 3048, 3182
NlaIV GGNNCC 5 cut(s) 597, 675, 846, 1471, 2368
NmuCI GTSAC 1 cut(s) 2522
NspI RCATGY 3 cut(s) 1087, 3048, 3182
NspV TTCGAA 1 cut(s) 2762
PagI TCATGA 1 cut(s) 798
PaqCI CACCTGC 1 cut(s) 2505
PciI ACATGT 2 cut(s) 1083, 3044
PciSI GCTCTTC 1 cut(s) 2282
PctI GAATGC 1 cut(s) 1980
PdmI GAANNNNTTC 2 cut(s) 544, 1097
PinAI ACCGGT 1 cut(s) 1973
PkrI GCNGC 3 cut(s) 102, 114, 662
PleI GAGTC 2 cut(s) 2755, 3004
PpsI GAGTC 2 cut(s) 2755, 3004
Ppu21I YACGTR 1 cut(s) 3187
PpuMI RGGWCCY 2 cut(s) 596, 674
PscI ACATGT 2 cut(s) 1083, 3044
PsiI TTATAA 2 cut(s) 1208, 2337
Psp124BI GAGCTC 1 cut(s) 925
Psp5II RGGWCCY 2 cut(s) 596, 674
Psp6I CCWGG 6 cut(s) 723, 944, 1406, 1758, 2143, 2369
PspEI GGTNACC 1 cut(s) 2729
PspFI CCCAGC 3 cut(s) 416, 1569, 2120
PspGI CCWGG 6 cut(s) 723, 944, 1406, 1758, 2143, 2369
PspN4I GGNNCC 5 cut(s) 597, 675, 846, 1471, 2368
PspPI GGNCC 9 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2708, 2755, 2780
PspPPI RGGWCCY 2 cut(s) 596, 674
PstI CTGCAG 2 cut(s) 858, 2016
PstNI CAGNNNCTG 1 cut(s) 934
PsuI RGATCY 5 cut(s) 834, 1009, 1150, 1669, 2207
PvuII CAGCTG 2 cut(s) 660, 3148
RsaI GTAC 7 cut(s) 820, 846, 895, 1404, 2094, 2368, 3014
RsaNI GTAC 7 cut(s) 819, 845, 894, 1403, 2093, 2367, 3013
RseI CAYNNNNRTG 1 cut(s) 570
SacI GAGCTC 1 cut(s) 925
SapI GCTCTTC 1 cut(s) 2282
SatI GCNGC 3 cut(s) 101, 113, 661
Sau96I GGNCC 9 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2708, 2755, 2780
ScaI AGTACT 1 cut(s) 2094
SchI GAGTC 2 cut(s) 2756, 3005
ScrFI CCNGG 8 cut(s) 594, 725, 946, 1408, 1760, 2145, 2371, 2427
SduI GDGCHC 3 cut(s) 289, 925, 1302
SfaNI GCATC 9 cut(s) 523, 1566, 2301, 2423, 2464, 2530, 2959, 3077, 3132
SfcI CTRYAG 4 cut(s) 854, 926, 2012, 2544
SfuI TTCGAA 1 cut(s) 2762
SinI GGWCC 7 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2755
SmiMI CAYNNNNRTG 1 cut(s) 570
SmlI CTYRAG 4 cut(s) 244, 509, 1120, 1639
SmoI CTYRAG 4 cut(s) 244, 509, 1120, 1639
SnaBI TACGTA 1 cut(s) 3187
SsiI CCGC 1 cut(s) 2341
SspI AATATT 1 cut(s) 667
SspMI CTAG 8 cut(s) 374, 941, 1427, 1769, 2168, 2189, 2213, 2744
SstI GAGCTC 1 cut(s) 925
StyD4I CCNGG 8 cut(s) 592, 723, 944, 1406, 1758, 2143, 2369, 2425
StyI CCWWGG 5 cut(s) 20, 1043, 2245, 2751, 2979
TaaI ACNGT 5 cut(s) 194, 818, 930, 1487, 2596
TaiI ACGT 3 cut(s) 796, 899, 3189
TaqI TCGA 8 cut(s) 32, 257, 864, 1511, 1855, 2762, 2879, 2985
TaqII GACCGA 1 cut(s) 1157
TatI WGTACW 2 cut(s) 2092, 3012
TscAI CASTG 9 cut(s) 858, 1199, 1290, 1471, 1492, 2066, 2368, 2527, 2782
TseFI GTSAC 1 cut(s) 2522
TseI GCWGC 3 cut(s) 100, 112, 660
Tsp45I GTSAC 1 cut(s) 2522
TspGWI ACGGA 1 cut(s) 1079
TspRI CASTG 9 cut(s) 858, 1199, 1290, 1471, 1492, 2066, 2368, 2527, 2782
VpaK11BI GGWCC 7 cut(s) 596, 674, 1034, 1397, 1775, 2636, 2755
XapI RAATTY 9 cut(s) 6, 319, 351, 520, 769, 778, 802, 952, 1334
XbaI TCTAGA 3 cut(s) 1768, 2167, 2188
XceI RCATGY 3 cut(s) 1087, 3048, 3182
XcmI CCANNNNNNNNNTGG 2 cut(s) 18, 1600
XmnI GAANNNNTTC 2 cut(s) 544, 1097
XspI CTAG 8 cut(s) 374, 941, 1427, 1769, 2168, 2189, 2213, 2744
ZrmI AGTACT 1 cut(s) 2094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.