RchiOBHm_Chr3g0478431

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
24189606 .. 24192431
2826 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44361

Sequence Viewer

Length: 2394 bp
ATGCTTTTTTTTTCTGGGACTATTCCTTCTTCTGTTGTTTCTCTTCCCAAACTAGAAACATTAACACTATCCCACAATCGGTTCTCAGGTCAACTCCCTGAATTTTCCAATACCTCTTCGCCCTTACTTGAAACCCTTCATTTGGAAAACAACAATTTAGAAGGACAAATACCAACATCTATCTTCAATCTTCAAGGGCTTCTGTATCTCAATCTTTCTTCAAACAACTTCAGCAGCTTTCCTTTTAATGGTCCTTGGCTGCCCAGAAATCTTTCATCGGTTGACCTTTCCCACAATAGCTTGTTGTTTGATCACAATGACACTAATTCCACCTTCCTTCAGATTGAAAATTTGGTATTGGCTTCTAACAAGTTGAGAGCATTCCCAGATTTCTTGAGAACTCAGTCTACATTAAACAACTTGGACCTTTCAAACAACCAGATTCAAGGCGAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTGATTCCCTTGATCTTTCTGGCAACTCCTTGAAGCTCTTCTTCCTAATTCCACTTCGATCTGCTTTATCTTCTCTGGACATTCATTCTAACAAGCTTCAAGGCAAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTAACAACTCCTTGGTGACTCTAGAAGCTCCTCTTCCTACTTCCACTTCTGCTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGCGAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTGGCAACTCCTTTGTGACTCTAGAAGCTCCTCTTCCTAATTCCACTTCTGCTTTATCTTCTTTAGACCTTTATTCCAACAAGCTTCAAGGTATCCATTCCTCATATTCCTTCCTTCAGCTTGATCACTTGGGATTAGCTTCTAACAAGTTGACAACATTTCCAGACTTCTTGAGAAATCAATCCCATCTAACCCACATAGACCTCTCAGACAACCAGATTCAAGGACAGATACCCAATTGGATTTGGAGTTTTGAACTTCGAGAACTAAATCTTTCTTGTAACTCCTTGGAAAGTTTAGAAGCTCCTTTAATTAATTCTACCTATGTTCTGTCTTCGGTTGATCTTCATTCAAACCAGCTTCAGGGACATTTCCCCTTGTTCTTAAATAGTAGTTATCTAGATTACTCAAGAAATAATTTCAACTCTAGTATACCAATTGACATTGGTTATTTCATTTCTACTGGGTCTTACCTTTCTCCTTCAAGTAATAACTTTCACGGGGCCATTCCAAAATCAATATGTAATGCAAGTGGTGTGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGAAACATTCCCCAATGCTTGACTCAATCACATTCGCTTTTGGCCATTGATATGAGGAAAAACAACCTGAGTGGCACATTTCCTGATAATTTTCTCAAGGATTGTGAGCTACGAACTCTCGACCTCAGCAACAATCAAATACAAGGCCAACTTCCGAAATCTCTTGTCAACTGCTCAAGGTTAGAGGTTTTAAACCTTGGAAACAATAACATAACTGATACTTTTCCATGCTTTTTGATGAGCATATCCACCTTGCGTGTCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAGCATTAGATGTCCCAAGACAAATGGCACATGGCCTGTGCTTCAAATAATAGATTTAGCTCACAACAATTTCAGTGGTGATATGCCAGGAAGAATGTCTCTGACATGGCAGGCTATGGTGTCTAATGAGGATGATTCTCCAACTAACCTTGGATTTTCTTATAAGCTGCCGGGAAGAGATAATGAAAATATGTATACTAGAGGCAATATTCAGTTGGTTCCTCGGGCCGATTATTATGGAGTTGCATCTAATGCTCGAAATAATCTGCGATGCGGGTGTAAGACAGATAGTAAAAATCCAGTTGCTAGATATAATTATCGGTATGTTACAGGTCCTAGCATTTATTATAGAAATGCTATTACGACTATCATCAAAGGTTTAGAGTTGAATGTGGTTAAGATTCTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGCGGAAATCGGAGAGTTGAAATCACTATATGTCCTTAACTTATCCGGTAATGCTTTTACAGGAAAAATCCCATCATCATTTGGTAAGATGCAACAACTGGAGTCCTTAGATCTCTCAAAGAACCACTTGAGTGGCCAAATTCCCCCACAGTTTGCATATCTCACTTTCCTTGCATTCTTGGATCTCTCTCAAATAATGAACTGGTCGGGAAGATCCCAACCAGCACTCAAATTTCAACATTTCCAAATACCTCATTCGAAGGTAACAGAGGATTATGGGGGCCTCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

797

Amino Acids

88.52

Weight (kDa)

6.31

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 115 - 172 2e-06 Leucine rich repeat
LRR_8 PF13855 487 - 546 1.3e-07 Leucine rich repeat
LRR_4 PF12799 487 - 524 1.7e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 709 - 764 2.8e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1806
Acc36I ACCTGC 1 cut(s) 2110
AccI GTMKAC 3 cut(s) 407, 1216, 1838
AciI CCGC 3 cut(s) 1624, 1917, 2105
AclWI GGATC 3 cut(s) 2101, 2292, 2310
AcoI YGGCCR 2 cut(s) 1395, 2236
AcsI RAATTY 5 cut(s) 101, 349, 2084, 2241, 2333
AcuI CTGAAG 4 cut(s) 214, 323, 884, 1130
AfiI CCNNNNNNNGG 4 cut(s) 78, 142, 248, 1147
AjnI CCWGG 1 cut(s) 1729
AleI CACNNNNGTG 1 cut(s) 2232
Alw26I GTCTC 4 cut(s) 479, 617, 761, 1746
AlwI GGATC 3 cut(s) 2101, 2292, 2310
Ama87I CYCGRG 1 cut(s) 1866
AoxI GGCC 7 cut(s) 1287, 1395, 1498, 1676, 1869, 2236, 2383
ApeKI GCWGC 3 cut(s) 234, 259, 1810
ApoI RAATTY 5 cut(s) 101, 349, 2084, 2241, 2333
AseI ATTAAT 1 cut(s) 1098
Asp700I GAANNNNTTC 3 cut(s) 135, 271, 521
AspS9I GGNCC 8 cut(s) 251, 424, 706, 1287, 1626, 1869, 1976, 2383
AsuC2I CCSGG 1 cut(s) 1815
AsuHPI GGTGA 3 cut(s) 667, 1733, 2050
AsuII TTCGAA 1 cut(s) 2360
AvaI CYCGRG 1 cut(s) 1866
AvaII GGWCC 5 cut(s) 251, 424, 706, 1626, 1976
BalI TGGCCA 2 cut(s) 1397, 2238
BarI GAAGNNNNNNTAC 2 cut(s) 153, 185
BbsI GAAGAC 1 cut(s) 1110
BbvCI CCTCAGC 1 cut(s) 1478
BbvI GCAGC 3 cut(s) 246, 246, 1797
BccI CCATC 2 cut(s) 978, 2182
BciT130I CCWGG 1 cut(s) 1731
BciVI GTATCC 1 cut(s) 887
BclI TGATCA 2 cut(s) 310, 907
BcnI CCSGG 1 cut(s) 1815
BcoDI GTCTC 4 cut(s) 479, 617, 761, 1746
BfaI CTAG 8 cut(s) 53, 662, 806, 1184, 1212, 1842, 1950, 1980
BfuAI ACCTGC 1 cut(s) 2110
BfuI GTATCC 1 cut(s) 887
BglII AGATCT 1 cut(s) 2212
BisI GCNGC 3 cut(s) 235, 260, 1811
BlsI GCNGC 3 cut(s) 236, 261, 1812
Bme1390I CCNGG 2 cut(s) 1731, 1815
Bme18I GGWCC 5 cut(s) 251, 424, 706, 1626, 1976
BmeT110I CYCGRG 1 cut(s) 1866
BmgT120I GGNCC 8 cut(s) 251, 424, 706, 1287, 1626, 1869, 1976, 2383
BmiI GGNNCC 3 cut(s) 1288, 1863, 2384
BmrFI CCNGG 2 cut(s) 1731, 1815
BmrI ACTGGG 1 cut(s) 1257
BmsI GCATC 3 cut(s) 1898, 1904, 2181
BmuI ACTGGG 1 cut(s) 1257
BpiI GAAGAC 1 cut(s) 1110
BpmI CTGGAG 1 cut(s) 2222
Bpu10I CCTNAGC 1 cut(s) 1478
Bpu14I TTCGAA 1 cut(s) 2360
BpuEI CTTGAG 7 cut(s) 415, 976, 1177, 1369, 1433, 1513, 2251
BpuMI CCSGG 1 cut(s) 1815
BsaJI CCNNGG 6 cut(s) 254, 651, 1071, 1549, 1792, 1865
BsaWI WCCGGW 1 cut(s) 2147
BsaXI ACNNNNNCTCC 2 cut(s) 2060, 2090
Bsc4I CCNNNNNNNGG 4 cut(s) 78, 142, 248, 1147
Bse1I ACTGG 4 cut(s) 1252, 1943, 2205, 2309
BseBI CCWGG 1 cut(s) 1731
BseDI CCNNGG 6 cut(s) 254, 651, 1071, 1549, 1792, 1865
BseGI GGATG 1 cut(s) 1780
BseLI CCNNNNNNNGG 4 cut(s) 78, 142, 248, 1147
BseMII CTCAG 5 cut(s) 99, 416, 1005, 1412, 1492
BseNI ACTGG 4 cut(s) 1252, 1943, 2205, 2309
BseRI GAGGAG 3 cut(s) 660, 804, 2065
BseXI GCAGC 3 cut(s) 246, 246, 1797
BshFI GGCC 7 cut(s) 1289, 1397, 1500, 1678, 1871, 2238, 2385
BsiHKCI CYCGRG 1 cut(s) 1866
BsiSI CCGG 2 cut(s) 1814, 2148
BslFI GGGAC 3 cut(s) 31, 1164, 1641
BslI CCNNNNNNNGG 4 cut(s) 78, 142, 248, 1147
BsmAI GTCTC 4 cut(s) 479, 617, 761, 1746
BsmFI GGGAC 3 cut(s) 31, 1164, 1641
BsmI GAATGC 2 cut(s) 380, 2276
BsnI GGCC 7 cut(s) 1289, 1397, 1500, 1678, 1871, 2238, 2385
BsoBI CYCGRG 1 cut(s) 1866
Bsp119I TTCGAA 1 cut(s) 2360
BspACI CCGC 3 cut(s) 1624, 1917, 2105
BspANI GGCC 7 cut(s) 1289, 1397, 1500, 1678, 1871, 2238, 2385
BspCNI CTCAG 5 cut(s) 98, 415, 1004, 1413, 1491
BspLI GGNNCC 3 cut(s) 1288, 1863, 2384
BspMI ACCTGC 1 cut(s) 2110
BspPI GGATC 3 cut(s) 2101, 2292, 2310
BspQI GCTCTTC 1 cut(s) 527
BspT104I TTCGAA 1 cut(s) 2360
BsrI ACTGG 4 cut(s) 1252, 1943, 2205, 2309
BssECI CCNNGG 6 cut(s) 254, 651, 1071, 1549, 1792, 1865
BssNAI GTATAC 2 cut(s) 1217, 1839
BssT1I CCWWGG 5 cut(s) 254, 651, 1071, 1549, 1792
Bst1107I GTATAC 2 cut(s) 1217, 1839
Bst2UI CCWGG 1 cut(s) 1731
Bst4CI ACNGT 1 cut(s) 2253
Bst6I CTCTTC 6 cut(s) 48, 121, 527, 678, 822, 1813
BstAPI GCANNNNNTGC 1 cut(s) 1895
BstBI TTCGAA 1 cut(s) 2360
BstC8I GCNNGC 1 cut(s) 1755
BstDEI CTNAG 6 cut(s) 85, 402, 991, 1421, 1478, 2209
BstF5I GGATG 1 cut(s) 1780
BstMAI GTCTC 4 cut(s) 479, 617, 761, 1746
BstMWI GCNNNNNNNGC 1 cut(s) 1895
BstNI CCWGG 1 cut(s) 1731
BstSCI CCNGG 2 cut(s) 1729, 1813
BstV1I GCAGC 3 cut(s) 246, 246, 1797
BstV2I GAAGAC 1 cut(s) 1110
BstX2I RGATCY 3 cut(s) 2212, 2284, 2315
BstXI CCANNNNNNTGG 1 cut(s) 2234
BstYI RGATCY 3 cut(s) 2212, 2284, 2315
BstZ17I GTATAC 2 cut(s) 1217, 1839
BsuI GTATCC 1 cut(s) 887
BsuRI GGCC 7 cut(s) 1289, 1397, 1500, 1678, 1871, 2238, 2385
BtgZI GCGATG 1 cut(s) 1927
BtsCI GGATG 1 cut(s) 1780
BtsIMutI CAGTG 1 cut(s) 1723
BveI ACCTGC 1 cut(s) 2110
Cac8I GCNNGC 1 cut(s) 1755
Cfr13I GGNCC 8 cut(s) 251, 424, 706, 1287, 1626, 1869, 1976, 2383
CspCI CAANNNNNGTGG 6 cut(s) 1302, 1337, 1405, 1440, 1699, 1734
CviAII CATG 3 cut(s) 1581, 1674, 1749
DdeI CTNAG 6 cut(s) 85, 402, 991, 1421, 1478, 2209
DraI TTTAAA 1 cut(s) 1545
EaeI YGGCCR 2 cut(s) 1395, 2236
Eam1104I CTCTTC 6 cut(s) 48, 121, 527, 678, 822, 1813
EarI CTCTTC 6 cut(s) 48, 121, 527, 678, 822, 1813
Eco130I CCWWGG 5 cut(s) 254, 651, 1071, 1549, 1792
Eco47I GGWCC 5 cut(s) 251, 424, 706, 1626, 1976
Eco57I CTGAAG 4 cut(s) 214, 323, 884, 1130
Eco88I CYCGRG 1 cut(s) 1866
EcoO109I RGGNCCY 2 cut(s) 1976, 2383
EcoRII CCWGG 1 cut(s) 1729
EcoT14I CCWWGG 5 cut(s) 254, 651, 1071, 1549, 1792
ErhI CCWWGG 5 cut(s) 254, 651, 1071, 1549, 1792
FaeI CATG 3 cut(s) 1584, 1677, 1752
FaqI GGGAC 3 cut(s) 31, 1164, 1641
FatI CATG 3 cut(s) 1580, 1673, 1748
FauI CCCGC 1 cut(s) 1910
FbaI TGATCA 2 cut(s) 310, 907
FblI GTMKAC 3 cut(s) 407, 1216, 1838
Fnu4HI GCNGC 3 cut(s) 235, 260, 1811
FokI GGATG 1 cut(s) 1787
Fsp4HI GCNGC 3 cut(s) 235, 260, 1811
FspBI CTAG 8 cut(s) 53, 662, 806, 1184, 1212, 1842, 1950, 1980
GluI GCNGC 3 cut(s) 235, 260, 1811
GsuI CTGGAG 1 cut(s) 2222
HaeIII GGCC 7 cut(s) 1289, 1397, 1500, 1678, 1871, 2238, 2385
HapII CCGG 2 cut(s) 1814, 2148
Hin1II CATG 3 cut(s) 1584, 1677, 1752
HincII GTYRAC 4 cut(s) 92, 283, 936, 1522
HindII GTYRAC 4 cut(s) 92, 283, 936, 1522
HindIII AAGCTT 3 cut(s) 578, 722, 866
HpaII CCGG 2 cut(s) 1814, 2148
HphI GGTGA 3 cut(s) 667, 1733, 2050
Hpy166II GTNNAC 7 cut(s) 92, 283, 408, 936, 1217, 1522, 1839
Hpy188I TCNGA 5 cut(s) 342, 994, 1509, 1746, 2114
Hpy8I GTNNAC 7 cut(s) 92, 283, 408, 936, 1217, 1522, 1839
HpyCH4III ACNGT 1 cut(s) 2253
HpyCH4V TGCA 5 cut(s) 1313, 1889, 2194, 2258, 2276
HpyF10VI GCNNNNNNNGC 1 cut(s) 1895
HpyF3I CTNAG 6 cut(s) 85, 402, 991, 1421, 1478, 2209
Hsp92II CATG 3 cut(s) 1584, 1677, 1752
Ksp22I TGATCA 2 cut(s) 310, 907
LguI GCTCTTC 1 cut(s) 527
LmnI GCTCC 3 cut(s) 673, 817, 1093
Lsp1109I GCAGC 3 cut(s) 246, 246, 1797
LweI GCATC 3 cut(s) 1898, 1904, 2181
MaeI CTAG 8 cut(s) 53, 662, 806, 1184, 1212, 1842, 1950, 1980
MaeIII GTNAC 5 cut(s) 655, 799, 1064, 1969, 2365
MfeI CAATTG 2 cut(s) 1021, 1221
MflI RGATCY 3 cut(s) 2212, 2284, 2315
MlsI TGGCCA 2 cut(s) 1397, 2238
MluNI TGGCCA 2 cut(s) 1397, 2238
MlyI GAGTC 7 cut(s) 481, 619, 652, 763, 796, 1369, 2213
MmeI TCCRAC 5 cut(s) 741, 885, 1653, 1808, 2103
Mox20I TGGCCA 2 cut(s) 1397, 2238
MroXI GAANNNNTTC 3 cut(s) 135, 271, 521
MscI TGGCCA 2 cut(s) 1397, 2238
MslI CAYNNNNRTG 2 cut(s) 1403, 2232
Msp20I TGGCCA 2 cut(s) 1397, 2238
MspI CCGG 2 cut(s) 1814, 2148
MspR9I CCNGG 2 cut(s) 1731, 1815
MunI CAATTG 2 cut(s) 1021, 1221
Mva1269I GAATGC 2 cut(s) 380, 2276
MvaI CCWGG 1 cut(s) 1731
MwoI GCNNNNNNNGC 1 cut(s) 1895
NciI CCSGG 1 cut(s) 1815
NlaIII CATG 3 cut(s) 1584, 1677, 1752
NlaIV GGNNCC 3 cut(s) 1288, 1863, 2384
NmuCI GTSAC 2 cut(s) 655, 799
NspV TTCGAA 1 cut(s) 2360
OliI CACNNNNGTG 1 cut(s) 2232
PacI TTAATTAA 1 cut(s) 1098
PciSI GCTCTTC 1 cut(s) 527
PctI GAATGC 2 cut(s) 380, 2276
PdmI GAANNNNTTC 3 cut(s) 135, 271, 521
PfeI GAWTC 5 cut(s) 442, 488, 1003, 1778, 2044
PkrI GCNGC 3 cut(s) 236, 261, 1812
PleI GAGTC 7 cut(s) 480, 618, 652, 762, 796, 1369, 2212
PpsI GAGTC 7 cut(s) 480, 618, 652, 762, 796, 1369, 2212
PpuMI RGGWCCY 1 cut(s) 1976
PshBI ATTAAT 1 cut(s) 1098
PsiI TTATAA 1 cut(s) 1806
Psp5II RGGWCCY 1 cut(s) 1976
Psp6I CCWGG 1 cut(s) 1729
PspGI CCWGG 1 cut(s) 1729
PspN4I GGNNCC 3 cut(s) 1288, 1863, 2384
PspPI GGNCC 8 cut(s) 251, 424, 706, 1287, 1626, 1869, 1976, 2383
PspPPI RGGWCCY 1 cut(s) 1976
PsrI GAACNNNNNNTAC 2 cut(s) 391, 423
PsuI RGATCY 3 cut(s) 2212, 2284, 2315
RseI CAYNNNNRTG 2 cut(s) 1403, 2232
SapI GCTCTTC 1 cut(s) 527
SatI GCNGC 3 cut(s) 235, 260, 1811
Sau96I GGNCC 8 cut(s) 251, 424, 706, 1287, 1626, 1869, 1976, 2383
SchI GAGTC 7 cut(s) 481, 619, 652, 763, 796, 1369, 2213
ScrFI CCNGG 2 cut(s) 1731, 1815
SfaNI GCATC 3 cut(s) 1898, 1904, 2181
SfuI TTCGAA 1 cut(s) 2360
SinI GGWCC 5 cut(s) 251, 424, 706, 1626, 1976
SmiMI CAYNNNNRTG 2 cut(s) 1403, 2232
SmlI CTYRAG 7 cut(s) 394, 955, 1192, 1348, 1448, 1528, 2230
SmoI CTYRAG 7 cut(s) 394, 955, 1192, 1348, 1448, 1528, 2230
SsiI CCGC 3 cut(s) 1624, 1917, 2105
SspI AATATT 1 cut(s) 1852
SspMI CTAG 8 cut(s) 53, 662, 806, 1184, 1212, 1842, 1950, 1980
StyD4I CCNGG 2 cut(s) 1729, 1813
StyI CCWWGG 5 cut(s) 254, 651, 1071, 1549, 1792
TaaI ACNGT 1 cut(s) 2253
TaqI TCGA 5 cut(s) 541, 1045, 1473, 1900, 2360
TfiI GAWTC 5 cut(s) 442, 488, 1003, 1778, 2044
TscAI CASTG 1 cut(s) 1723
TseFI GTSAC 2 cut(s) 655, 799
TseI GCWGC 3 cut(s) 234, 259, 1810
Tsp45I GTSAC 2 cut(s) 655, 799
TspDTI ATGAA 8 cut(s) 128, 264, 557, 701, 1121, 1228, 1842, 2315
TspGWI ACGGA 1 cut(s) 2106
TspRI CASTG 1 cut(s) 1723
VpaK11BI GGWCC 5 cut(s) 251, 424, 706, 1626, 1976
VspI ATTAAT 1 cut(s) 1098
XapI RAATTY 5 cut(s) 101, 349, 2084, 2241, 2333
XbaI TCTAGA 3 cut(s) 661, 805, 1183
XmiI GTMKAC 3 cut(s) 407, 1216, 1838
XmnI GAANNNNTTC 3 cut(s) 135, 271, 521
XspI CTAG 8 cut(s) 53, 662, 806, 1184, 1212, 1842, 1950, 1980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.