RchiOBHm_Chr3g0478381

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000047
Physical Location & Seq
Forward (+)
24160203 .. 24163334
3132 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44358

Sequence Viewer

Length: 3132 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACGACCACTGTTACTAACCTTATCCCCGCAGTTCACAGCAACTGCATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAGAAACTTGTAAATGATTCTTCCGACTCCTCCAAGCTTATCACATGGAATTCGAGTACAGACTGCTGTTCTTGGCTTGGTGTAAATTGCAGCACTAATGGGCGTGTTGTTGGACTTGACCTCAGCGGGGAGTTTGTCCCATCCAGCATTGACAATTTCAGCAGTCTTTTCCAACTTCAACATCTTCAGAGCCTCAACTTAGCCTATACCTTCTTCTTTTTCTCTTCAATTCCATCTTCAATTCCATCTGGAATTGGAAAGTTTGCAAATTTGAGGTATTTGAATTTAAGTCGTGCTTTTTTTAGTGGGGAAATTCCCACTGAGATTGCACGCTTGACAAGGTTGAAGGTTCTTGATCTCTCTATGTATTACTCGCAACGGAAAAGACTCGAGAATTCGAATTTAGGCACCTTGATCCAGAACCTTACAGAGCTTACAGAGTTGAATCTGGATGGTATGAATCTATCTGAGGAATCTCACTGGAGCCAAACCATATCATCTTCACTTCCAAAGCTGAGTGTGTTGAGCTTGTCCAATTGTGATCTTTCAGGCCCTATTCATGAATCTTTTGCCAGGCTTGATTCTCTATCCACGTTAATATTGCATGGAAACAATATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAATCTCTCTGAAAGTAACATCCATGGAGCATTTCCCAAAGAGATATTCCAGGTACCTACACTACAGTCTGTTGACCTATCACTTAATTCAGAGCTTCGTGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAATTCCTAGTTCTATCCGGGACTAATTTCTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTAAAATGCTGTCTGAATTGGATCTTACAGAATGCAATTTCACAGGAGCAGTTCCAAAGTCATTGGCCAACCTAACACAATTGGGGCATTTGTACTTGTCATCCAACAAGTTTTCTAGTCCGATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGTGGATCTCGACTTGTCGGACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTCTCTATTCCCTTGCTGCAGAGGTTAGATCTTTCTGGAAATAACTTCTCTAGTCAATTGCTTGAATTTTCTAATGTCTCTTCGTCCTCGCTACTCTCTCTTGATTTGAGTAGGAACAATTTGGAAGGATCCATACCTGTGTCTATCCTTAATCTTCCAAAGCTTGATATCTTTAATCTTTATTCAAACAACTTGAGTGGTTTTCCTTTTTATGGCCTTCAGGAGTCGAGAAATCTTTCGTTTCTTGATCTATCCTACAATAGCTTGTTGTTCAATCATAGTGGTACCAACTCATCACACCCCTCTCTCCTTCAGATTAAAACCCTGTATTTGACTTCTAACAAGTTGAAAGCATTCCCAAGTTTCCTGAAAAATCAATCTTATTTAACCGAATTGGACCTTTCAAACAACCAAATTCCAGGTCAGATACCCAATTGGATTTGGAAGCATCCTCTCGATAATCTATATCTATGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACTCGGTTCTACTAATTACCATCTCAGTAATCTTGATCTTCACTCAAACCAGATTCAAGGACAAATACCATTGTTTGTGAGGGGTGATTATTTGGATTACTCAAGAAATAATTTCAGCTCTAGTATGCCAACGGACATTGGTGATTTCATTTCTCCCACGTATTACCTTTCTCTTTCAGGAAATAACTTGAATGGGGAAATTCCAAAATCAATATGCAATGCAAGTGGTCGAGTTCTTGATCTCTCTAATAACTCTTTCAGTGGAATCATTCCCCAATGCTTGACTCAGACATCTTCGCTTAAAGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCCGATACTTTTCTTGAAGGTTGTGATTTGCATACTCTAGCTCTGGGCAGAAATCAGATACAAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCAAGCTTAGCGGTTTTAGACCTTGGAATCAATCAAGTAACAGATGCCTTTCCCTGCCCGTTGAAGACCATATCCACCTTGCATGTCCTTATATTGCGATCAAACAAATTTTATGGACCCATTGGATGTCCCAAGACCATTGGCACCTGGCCGTACCTTCAAATCATAGATTTGGCTCATAATAGTTTCAATGGTGAAATAACAGGTACATCATTGAGAACATGGCAAGCAATGATGGTTAATGACGACTCCTATTACCTTGGGTTTGGGTGGGGAGTTGGTCGTCGAGGTGGGGCTCTTATAAATTATGGTGATGTAGTAACAACTACAAGCAAAGGTCTAGAGACGGATCTTGTTCCTTTAAGTAGCTTCACTTCGATTGACTTCTCTGCTAACAAGTTCAACGGAACAATACCCAAGGAAATCGGCCAATTGGCATCATTACATGTCCTCAATCTGTCCAGTAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGAAACATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGCGGCCAAATTCCACCACAGTTTGCAAATCTCAATTTCTTGTCATTTTTGAATGTCTCATATAATCAACTGGCGGGAAGGATCCCAACTAGCACTCAGTTATCGACATTTCTGAATACCTCATTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATGCAGTAATCGTATCGCCACCTCCGACATTAAATGGAAGCTCAAGTAATCCGAATTCTGGAGATGAGATTGATTGGAATGTTATTAGTGCTGAAATTGGTTTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAACATCCTGTTCAAGATATTCCCTCGGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTTAAATGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1043

Amino Acids

115.41

Weight (kDa)

6.43

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 70 1.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 87 - 189 6.5e-06 Leucine-rich repeat region
LRR_8 PF13855 234 - 291 7.5e-06 Leucine rich repeat
LRR_8 PF13855 306 - 365 7.4e-06 Leucine rich repeat
LRR_14 PF23598 307 - 364 1.6e-06 Leucine-rich repeat region
LRR_8 PF13855 644 - 685 9.9e-06 Leucine rich repeat
LRR_8 PF13855 859 - 918 1.4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2438
Acc65I GGTACC 2 cut(s) 838, 1478
AccB1I GGYRCC 4 cut(s) 524, 838, 1478, 2279
AccB7I CCANNNNNTGG 1 cut(s) 911
AccBSI CCGCTC 1 cut(s) 2685
AciI CCGC 5 cut(s) 66, 243, 2147, 2685, 2756
AcoI YGGCCR 4 cut(s) 1047, 2285, 2563, 2686
AcuI CTGAAG 3 cut(s) 287, 1397, 1490
AfaI GTAC 6 cut(s) 175, 840, 1076, 1480, 2291, 2344
AfiI CCNNNNNNNGG 6 cut(s) 244, 911, 1406, 1703, 2906, 3058
AflIII ACRYGT 2 cut(s) 2581, 2954
AjnI CCWGG 4 cut(s) 689, 834, 1612, 2282
AjuI GAANNNNNNNTTGG 4 cut(s) 815, 847, 3054, 3086
Alw26I GTCTC 5 cut(s) 1194, 1276, 2474, 2743, 3109
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 506
AoxI GGCC 7 cut(s) 667, 1047, 1408, 2285, 2563, 2686, 2831
ApeKI GCWGC 2 cut(s) 207, 1210
ArsI GACNNNNNNTTYG 2 cut(s) 1600, 1632
AseI ATTAAT 1 cut(s) 1107
Asp700I GAANNNNTTC 2 cut(s) 1429, 1547
Asp718I GGTACC 2 cut(s) 838, 1478
AspS9I GGNCC 5 cut(s) 668, 740, 1591, 2252, 2831
AsuC2I CCSGG 1 cut(s) 940
AsuHPI GGTGA 4 cut(s) 1796, 1853, 2342, 2459
AsuII TTCGAA 1 cut(s) 515
AvaI CYCGRG 1 cut(s) 506
AvaII GGWCC 3 cut(s) 740, 1591, 2252
BalI TGGCCA 1 cut(s) 1049
BamHI GGATCC 2 cut(s) 1322, 2763
BanI GGYRCC 4 cut(s) 524, 838, 1478, 2279
BanII GRGCYC 1 cut(s) 2434
BarI GAAGNNNNNNTAC 6 cut(s) 1311, 1343, 1683, 1715, 2494, 2526
BbsI GAAGAC 1 cut(s) 2207
BbvCI CCTCAGC 1 cut(s) 239
BbvI GCAGC 2 cut(s) 219, 1197
BccI CCATC 8 cut(s) 265, 358, 370, 563, 1728, 2365, 2632, 2994
BceAI ACGGC 2 cut(s) 2272, 2957
BciT130I CCWGG 4 cut(s) 691, 836, 1614, 2284
BcnI CCSGG 1 cut(s) 940
BcoDI GTCTC 5 cut(s) 1194, 1276, 2474, 2743, 3109
BfaI CTAG 9 cut(s) 929, 1098, 1245, 1688, 1821, 2081, 2126, 2477, 2772
BfmI CTRYAG 2 cut(s) 848, 1211
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 3 cut(s) 208, 1211, 2686
BlpI GCTNAGC 1 cut(s) 2143
BlsI GCNGC 3 cut(s) 209, 1212, 2687
Bme1390I CCNGG 5 cut(s) 691, 836, 940, 1614, 2284
Bme18I GGWCC 3 cut(s) 740, 1591, 2252
BmeT110I CYCGRG 1 cut(s) 506
BmgT120I GGNCC 5 cut(s) 668, 740, 1591, 2252, 2831
BmrFI CCNGG 5 cut(s) 691, 836, 940, 1614, 2284
BmsI GCATC 4 cut(s) 1651, 2170, 2582, 2839
BpiI GAAGAC 1 cut(s) 2207
BpmI CTGGAG 2 cut(s) 619, 2928
Bpu10I CCTNAGC 2 cut(s) 239, 2681
Bpu1102I GCTNAGC 1 cut(s) 2143
Bpu14I TTCGAA 1 cut(s) 515
BpuEI CTTGAG 3 cut(s) 1408, 1786, 2875
BpuMI CCSGG 1 cut(s) 940
BsaAI YACGTR 1 cut(s) 1860
BsaJI CCNNGG 5 cut(s) 808, 2158, 2395, 2553, 3053
BsaWI WCCGGW 2 cut(s) 742, 895
Bsc4I CCNNNNNNNGG 6 cut(s) 244, 911, 1406, 1703, 2906, 3058
Bse1I ACTGG 4 cut(s) 602, 2038, 2598, 2757
Bse3DI GCAATG 3 cut(s) 104, 1924, 2373
BseBI CCWGG 4 cut(s) 691, 836, 1614, 2284
BseDI CCNNGG 5 cut(s) 808, 2158, 2395, 2553, 3053
BseGI GGATG 9 cut(s) 257, 574, 804, 1082, 1642, 2267, 2627, 2854, 3033
BseLI CCNNNNNNNGG 6 cut(s) 244, 911, 1406, 1703, 2906, 3058
BseMI GCAATG 3 cut(s) 104, 1924, 2373
BseMII CTCAG 9 cut(s) 253, 429, 576, 623, 966, 1738, 2000, 2672, 2792
BseNI ACTGG 4 cut(s) 602, 2038, 2598, 2757
BseRI GAGGAG 3 cut(s) 136, 2032, 2826
BseXI GCAGC 2 cut(s) 219, 1197
BshFI GGCC 7 cut(s) 669, 1049, 1410, 2287, 2565, 2688, 2833
BshNI GGYRCC 4 cut(s) 524, 838, 1478, 2279
BsiHKCI CYCGRG 1 cut(s) 506
BsiSI CCGG 4 cut(s) 743, 896, 939, 965
BslFI GGGAC 4 cut(s) 239, 955, 1136, 2250
BslI CCNNNNNNNGG 6 cut(s) 244, 911, 1406, 1703, 2906, 3058
BsmAI GTCTC 5 cut(s) 1194, 1276, 2474, 2743, 3109
BsmBI CGTCTC 2 cut(s) 2474, 3109
BsmFI GGGAC 4 cut(s) 239, 955, 1136, 2250
BsmI GAATGC 2 cut(s) 1019, 1547
BsnI GGCC 7 cut(s) 669, 1049, 1410, 2287, 2565, 2688, 2833
BsoBI CYCGRG 1 cut(s) 506
Bsp119I TTCGAA 1 cut(s) 515
Bsp1286I GDGCHC 1 cut(s) 2434
Bsp1720I GCTNAGC 1 cut(s) 2143
Bsp19I CCATGG 1 cut(s) 808
BspACI CCGC 5 cut(s) 66, 243, 2147, 2685, 2756
BspANI GGCC 7 cut(s) 669, 1049, 1410, 2287, 2565, 2688, 2833
BspCNI CTCAG 9 cut(s) 252, 430, 577, 624, 965, 1737, 1999, 2673, 2791
BspHI TCATGA 1 cut(s) 676
BspMAI CTGCAG 1 cut(s) 1215
BspT104I TTCGAA 1 cut(s) 515
BspT107I GGYRCC 4 cut(s) 524, 838, 1478, 2279
BsrBI CCGCTC 1 cut(s) 2685
BsrDI GCAATG 3 cut(s) 104, 1924, 2373
BsrI ACTGG 4 cut(s) 602, 2038, 2598, 2757
BssECI CCNNGG 5 cut(s) 808, 2158, 2395, 2553, 3053
BssT1I CCWWGG 4 cut(s) 808, 2158, 2395, 2553
Bst2UI CCWGG 4 cut(s) 691, 836, 1614, 2284
Bst4CI ACNGT 3 cut(s) 49, 852, 2703
Bst6I CTCTTC 2 cut(s) 346, 1279
BstBAI YACGTR 1 cut(s) 1860
BstBI TTCGAA 1 cut(s) 515
BstC8I GCNNGC 2 cut(s) 448, 2364
BstDSI CCRYGG 1 cut(s) 808
BstF5I GGATG 9 cut(s) 257, 574, 804, 1082, 1642, 2267, 2627, 2854, 3033
BstMAI GTCTC 5 cut(s) 1194, 1276, 2474, 2743, 3109
BstNI CCWGG 4 cut(s) 691, 836, 1614, 2284
BstNSI RCATGY 4 cut(s) 2222, 2585, 2958, 3092
BstSCI CCNGG 5 cut(s) 689, 834, 938, 1612, 2282
BstSFI CTRYAG 2 cut(s) 848, 1211
BstV1I GCAGC 2 cut(s) 219, 1197
BstV2I GAAGAC 1 cut(s) 2207
BstX2I RGATCY 8 cut(s) 914, 1003, 1144, 1222, 1322, 2036, 2485, 2763
BstYI RGATCY 8 cut(s) 914, 1003, 1144, 1222, 1322, 2036, 2485, 2763
BsuRI GGCC 7 cut(s) 669, 1049, 1410, 2287, 2565, 2688, 2833
BtgI CCRYGG 1 cut(s) 808
BtsCI GGATG 9 cut(s) 257, 574, 804, 1082, 1642, 2267, 2627, 2854, 3033
BtsIMutI CAGTG 4 cut(s) 45, 435, 595, 1966
Cac8I GCNNGC 2 cut(s) 448, 2364
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 676
Cfr13I GGNCC 5 cut(s) 668, 740, 1591, 2252, 2831
Csp6I GTAC 6 cut(s) 174, 839, 1075, 1479, 2290, 2343
CspCI CAANNNNNGTGG 8 cut(s) 424, 459, 1372, 1407, 1456, 1491, 1906, 1941
CviQI GTAC 6 cut(s) 174, 839, 1075, 1479, 2290, 2343
DraI TTTAAA 1 cut(s) 3123
EaeI YGGCCR 4 cut(s) 1047, 2285, 2563, 2686
Eam1104I CTCTTC 2 cut(s) 346, 1279
EarI CTCTTC 2 cut(s) 346, 1279
Eco130I CCWWGG 4 cut(s) 808, 2158, 2395, 2553
Eco24I GRGCYC 1 cut(s) 2434
Eco32I GATATC 1 cut(s) 1363
Eco47I GGWCC 3 cut(s) 740, 1591, 2252
Eco57I CTGAAG 3 cut(s) 287, 1397, 1490
Eco88I CYCGRG 1 cut(s) 506
EcoO109I RGGNCCY 2 cut(s) 668, 2831
EcoRI GAATTC 4 cut(s) 166, 511, 923, 2902
EcoRII CCWGG 4 cut(s) 689, 834, 1612, 2282
EcoRV GATATC 1 cut(s) 1363
EcoT14I CCWWGG 4 cut(s) 808, 2158, 2395, 2553
EcoT38I GRGCYC 1 cut(s) 2434
ErhI CCWWGG 4 cut(s) 808, 2158, 2395, 2553
Esp3I CGTCTC 2 cut(s) 2474, 3109
FalI AAGNNNNNCTT 2 cut(s) 397, 429
FaqI GGGAC 4 cut(s) 239, 955, 1136, 2250
FauI CCCGC 3 cut(s) 73, 236, 2749
Fnu4HI GCNGC 3 cut(s) 208, 1211, 2686
FokI GGATG 9 cut(s) 244, 581, 791, 1069, 1629, 2274, 2614, 2861, 3020
FriOI GRGCYC 1 cut(s) 2434
Fsp4HI GCNGC 3 cut(s) 208, 1211, 2686
FspBI CTAG 9 cut(s) 929, 1098, 1245, 1688, 1821, 2081, 2126, 2477, 2772
GluI GCNGC 3 cut(s) 208, 1211, 2686
GsuI CTGGAG 2 cut(s) 619, 2928
HaeIII GGCC 7 cut(s) 669, 1049, 1410, 2287, 2565, 2688, 2833
HapII CCGG 4 cut(s) 743, 896, 939, 965
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HindIII AAGCTT 5 cut(s) 152, 772, 1136, 1355, 2140
HpaII CCGG 4 cut(s) 743, 896, 939, 965
HphI GGTGA 4 cut(s) 1796, 1853, 2342, 2459
Hpy166II GTNNAC 3 cut(s) 73, 859, 3094
Hpy8I GTNNAC 3 cut(s) 73, 859, 3094
Hpy99I CGWCG 2 cut(s) 2424, 2978
HpyCH4III ACNGT 3 cut(s) 49, 852, 2703
HpyCH4IV ACGT 3 cut(s) 710, 1859, 3118
HpySE526I ACGT 3 cut(s) 710, 1859, 3118
KpnI GGTACC 2 cut(s) 842, 1482
LmnI GCTCC 5 cut(s) 114, 600, 812, 1028, 1699
Lsp1109I GCAGC 2 cut(s) 219, 1197
LweI GCATC 4 cut(s) 1651, 2170, 2582, 2839
MaeI CTAG 9 cut(s) 929, 1098, 1245, 1688, 1821, 2081, 2126, 2477, 2772
MaeII ACGT 3 cut(s) 710, 1859, 3118
MaeIII GTNAC 8 cut(s) 49, 800, 1670, 2173, 2455, 2636, 2813, 2979
MbiI CCGCTC 1 cut(s) 2685
MfeI CAATTG 6 cut(s) 652, 1061, 1250, 1627, 2131, 2567
MflI RGATCY 8 cut(s) 914, 1003, 1144, 1222, 1322, 2036, 2485, 2763
MhlI GDGCHC 1 cut(s) 2434
MlsI TGGCCA 1 cut(s) 1049
MluNI TGGCCA 1 cut(s) 1049
MlyI GAGTC 8 cut(s) 137, 498, 962, 966, 1427, 1978, 2378, 2663
MmeI TCCRAC 6 cut(s) 165, 208, 313, 1110, 1137, 2897
Mox20I TGGCCA 1 cut(s) 1049
MroXI GAANNNNTTC 2 cut(s) 1429, 1547
MscI TGGCCA 1 cut(s) 1049
MslI CAYNNNNRTG 1 cut(s) 1331
Msp20I TGGCCA 1 cut(s) 1049
MspA1I CMGCKG 1 cut(s) 243
MspI CCGG 4 cut(s) 743, 896, 939, 965
MspR9I CCNGG 5 cut(s) 691, 836, 940, 1614, 2284
MunI CAATTG 6 cut(s) 652, 1061, 1250, 1627, 2131, 2567
Mva1269I GAATGC 2 cut(s) 1019, 1547
MvaI CCWGG 4 cut(s) 691, 836, 1614, 2284
NciI CCSGG 1 cut(s) 940
NcoI CCATGG 1 cut(s) 808
NmeAIII GCCGAG 1 cut(s) 3034
NmuCI GTSAC 1 cut(s) 2979
NspI RCATGY 4 cut(s) 2222, 2585, 2958, 3092
NspV TTCGAA 1 cut(s) 515
PaeR7I CTCGAG 1 cut(s) 506
PagI TCATGA 1 cut(s) 676
PciI ACATGT 2 cut(s) 2581, 2954
PcsI WCGNNNNNNNCGW 1 cut(s) 2870
PctI GAATGC 2 cut(s) 1019, 1547
PdmI GAANNNNTTC 2 cut(s) 1429, 1547
PflMI CCANNNNNTGG 1 cut(s) 911
PfoI TCCNGGA 1 cut(s) 938
PkrI GCNGC 3 cut(s) 209, 1212, 2687
PleI GAGTC 8 cut(s) 137, 498, 962, 965, 1426, 1978, 2378, 2662
PpsI GAGTC 8 cut(s) 137, 498, 962, 965, 1426, 1978, 2378, 2662
Ppu21I YACGTR 1 cut(s) 1860
PscI ACATGT 2 cut(s) 2581, 2954
PshBI ATTAAT 1 cut(s) 1107
PsiI TTATAA 1 cut(s) 2438
Psp6I CCWGG 4 cut(s) 689, 834, 1612, 2282
PspGI CCWGG 4 cut(s) 689, 834, 1612, 2282
PspPI GGNCC 5 cut(s) 668, 740, 1591, 2252, 2831
PstI CTGCAG 1 cut(s) 1215
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 8 cut(s) 914, 1003, 1144, 1222, 1322, 2036, 2485, 2763
RsaI GTAC 6 cut(s) 175, 840, 1076, 1480, 2291, 2344
RsaNI GTAC 6 cut(s) 174, 839, 1075, 1479, 2290, 2343
RseI CAYNNNNRTG 1 cut(s) 1331
SatI GCNGC 3 cut(s) 208, 1211, 2686
Sau96I GGNCC 5 cut(s) 668, 740, 1591, 2252, 2831
SchI GAGTC 8 cut(s) 137, 498, 962, 966, 1427, 1978, 2378, 2663
ScrFI CCNGG 5 cut(s) 691, 836, 940, 1614, 2284
SduI GDGCHC 1 cut(s) 2434
SfaNI GCATC 4 cut(s) 1651, 2170, 2582, 2839
SfcI CTRYAG 2 cut(s) 848, 1211
Sfr274I CTCGAG 1 cut(s) 506
SfuI TTCGAA 1 cut(s) 515
SinI GGWCC 3 cut(s) 740, 1591, 2252
SlaI CTCGAG 1 cut(s) 506
SmiMI CAYNNNNRTG 1 cut(s) 1331
SmlI CTYRAG 4 cut(s) 506, 1387, 1801, 2890
SmoI CTYRAG 4 cut(s) 506, 1387, 1801, 2890
SsiI CCGC 5 cut(s) 66, 243, 2147, 2685, 2756
SspI AATATT 1 cut(s) 717
SspMI CTAG 9 cut(s) 929, 1098, 1245, 1688, 1821, 2081, 2126, 2477, 2772
StyD4I CCNGG 5 cut(s) 689, 834, 938, 1612, 2282
StyI CCWWGG 4 cut(s) 808, 2158, 2395, 2553
TaaI ACNGT 3 cut(s) 49, 852, 2703
TaiI ACGT 3 cut(s) 713, 1862, 3121
TatI WGTACW 2 cut(s) 173, 1074
TauI GCSGC 1 cut(s) 2688
TscAI CASTG 4 cut(s) 52, 442, 602, 1966
TseFI GTSAC 1 cut(s) 2979
TseI GCWGC 2 cut(s) 207, 1210
Tsp45I GTSAC 1 cut(s) 2979
TspDTI ATGAA 4 cut(s) 590, 665, 693, 1837
TspGWI ACGGA 4 cut(s) 511, 1847, 2498, 2556
TspRI CASTG 4 cut(s) 52, 442, 602, 1966
Van91I CCANNNNNTGG 1 cut(s) 911
VpaK11BI GGWCC 3 cut(s) 740, 1591, 2252
VspI ATTAAT 1 cut(s) 1107
XbaI TCTAGA 2 cut(s) 1687, 2476
XceI RCATGY 4 cut(s) 2222, 2585, 2958, 3092
XhoI CTCGAG 1 cut(s) 506
XmnI GAANNNNTTC 2 cut(s) 1429, 1547
XspI CTAG 9 cut(s) 929, 1098, 1245, 1688, 1821, 2081, 2126, 2477, 2772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.