RchiOBHm_Chr1g0316251

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Forward (+)
3510403 .. 3513485
3083 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54670

Sequence Viewer

Length: 3003 bp
ATGATAACTTTGATCTTCCATTTCTTCCTCTTCTTGATCACTCCTTGTGTTACTAACCTCATCCCTACTGTTCACAGCAAATGTATTGAAGCCCATAAAGAATCATTGCTCAATTTCAAGAAAAGTCTTGTATTTAATTCTTCTTCTTCCTCCAAGCTCATAACATGGAATTCGAATACCGAATGCTGTACTTGGACCGGAGTAACTTGCAGCACTAATGGGAGTGTTGTTGGACTTGACATCAGCAGCGAGTCTATCTCATGCAACATTGACAATTCCAGCAGTCTTTTCCAACTACAACATCTTCAGAGACTCAATTTAGCCTATACTAATTTCTGTGGTTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATCGGAATTTAAGAGGGGTTTATTTTTCTGGGAAAATTCCAATCGAGGTTGCACACTTAACGAGGCTGGTAGTTCTTGATCTCTCTTATAATTCCTATCTCTTTTTTGCTGAGAACCAGAATTTGAGCATGCTAATTCAGAACCTCACAGAGCTTACAGAATTATATCTTGATCATATAAACCTGTCGGCTGAGGGATCTCACTGGAGCCAAACCATATCATCTTCACTTCCAAAGCTGAGTGTGTTGACCTTGTCCTATTGTGATCTTTCAGGCCCTATTCATGAATCATTTGCCAAGCTTGATTCTCTATCCATGTTAATATTGTATGGAAACAATATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTAAGACTCTCCGCTTGTAACTTGTATGGAGCATTTCCCAGAGAGATATTCCAGGTACCTACACTACGGTTTGTTGACCTATCAGCTAATTCAGAGCTTCGTGGTTCCTTACCGGAATTTCTAAAGAATGGATCTCTCGAATCCTTAGTTCTATCCGGGACTAAGTTTTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTGAAATGCTGTCTGGATTATATCTTTCAGATTGCAATTTCACAGGGGCAGTTCCAAAGTCACTGGCAAACCTAACACAATTGAGGTTTTTGGCCTTGTCATCCAACAAGTTTTCTGGTTCGATTAATTATATTCAATGGGACAAACTCATCAAGCTTGAGCTTCTCGACTTGTCCAACAATCTTCTTTATAGGAGTATTCCATTGTCTCCCTTTTCTATTCCCTGGCTGCGGAGGTTAGACCTTTATGGAAATCACTTCTCCGGTCAGGTGCTTGAATTTTCTAATGTCTCTTCGTACTTGCTGTACAAACTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCCGTGTCTATCTTTAATCTTCGAGGGCTTCAAGTGTTAAATCTTTCTTCAAACAACTTGAGTGATTTTCCTTTTTATGGTCTTCAGGAGTCGAGAAATCTTTCATTTCTTGATCTATCCCACAATAGCTTGTTGTTCAATCATAATGGTACCAACTCATCACACCCCTCCCTCCTTCAGATTCAGGCCTTGAAGTTGGATTCTAACAAGTTGAAAACATTCCCAAATTTCCTGAAAAATCAGTCTAGTTTAGCCTACTTGGATCTTTCAGACAACCAGATTCCAGGTCAGATACCCAATTGGATATGGGGGCTTCCTATTAAAACTCTAGGTCTCTGTTGTAACAAGTTGGGACAAATACCATTGTTCATAAGTGGTAATTATTTGGATTACTCAACAAATAATTTCAGCTCTAGTATACCAACTGATATTGGTGATTTCATTTCTTCCACGGCCTACCTTTCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAATATCAATATGCAATGCAAGTGGCATAGTTCTTGATCTCTCTAATAACTCTTTGAGTGGAATCATTCCCCAATGCTTGACTCAGGCATCTTCGCTTAATGTCCTTGATTTGAGGAGAAACAACCTTAATGGATCTATCCCCGATACTTTTCTTCAAGGTTGTAATTTGCAAAGTCTAGCTCTGAGCAGAAATCATATACAAGGTCCAATTCCAAAATCTCTAGCCAATTGTTCAAGCTTAGAGGTTTTAGACCTTGGAGTCAATCAAATAACAGATGCCTTTCCCTGCATGTTGAAGACCATATCCACCTTGCGTGTCCTTGTGTTGCAATCCAACAAATTTTATGGACCCATTGGATGTCCTGAGACCAATGGCACCTGGCCGAAGCTTCAAATCATAGACTTAGCTCATAACAGTTTCAATGGTGAAATACCAGGTATGTCATTGACAACATGGAAGGCAATGATGGTTAATGAAGATAATTACCAATCTCCCCGTAGCTTTTGGTGGGGAGCAGGTGGTGGAAGTGGGCACTCTATTCAATTGGAAGATGTAGTAACAACTACAATCAAAGGTCTAGAGATGGATCTTGTACGTATTTCAACTATCTTCACTTCGATTGACTTCTCTGCTAACAAGTTCAACGGAACAATACCCAAGGAAATGGGTCTACTAAGATTATTATATGCCCTCAATCTGTCCAGTAATGCTTTCACAGGTGAAATCCCATCATCCTTTGGTAACGTGAGAACCATCGAGTCCTTAGACCTCTCTCAAAACCATCTGAGCGGCCAAATTCCACCACAATTTGCAAGTCTCACTTTCCTTTCGTTCTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAAGCTGCACTCAGTTTTCGACTTTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCAGATACAACAATCATATTGCCACATCTGACGATAAATGAAATCTCAAGTATGCCTAATTCTGGAGATGAGAATGATTGGAATGTTATCAGTGTTGAAATTGGATTTATATGTGGTCTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGAGCTATGTTTAACATCCTGTTCAAGATATTCCCTCAGCTGGAACACAGATTTGGTAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1000

Amino Acids

110.56

Weight (kDa)

6.24

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 1.7e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 283 8.4e-09 Leucine-rich repeat region
LRR_8 PF13855 303 - 362 3e-06 Leucine rich repeat
LRR_8 PF13855 426 - 484 3.9e-08 Leucine rich repeat
LRR_8 PF13855 616 - 672 2.3e-07 Leucine rich repeat
LRR_8 PF13855 661 - 720 3.8e-07 Leucine rich repeat
LRR_8 PF13855 834 - 892 4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 474
AarI CACCTGC 1 cut(s) 2324
AasI GACNNNNNNGTC 1 cut(s) 2075
Acc36I ACCTGC 1 cut(s) 2324
Acc65I GGTACC 2 cut(s) 829, 1469
AccB1I GGYRCC 3 cut(s) 829, 1469, 2192
AccBSI CCGCTC 1 cut(s) 2607
AccI GTMKAC 2 cut(s) 1738, 2488
AciI CCGC 3 cut(s) 786, 1204, 2607
AclWI GGATC 8 cut(s) 589, 913, 1321, 1590, 1957, 2412, 2680, 2693
AcoI YGGCCR 2 cut(s) 2198, 2608
AcuI CTGAAG 3 cut(s) 290, 1388, 1481
AfaI GTAC 7 cut(s) 190, 831, 1271, 1280, 1471, 2412, 2936
AfiI CCNNNNNNNGG 4 cut(s) 1203, 1397, 2828, 2980
AflII CTTAAG 1 cut(s) 775
AjnI CCWGG 5 cut(s) 825, 1196, 1603, 2195, 2251
AjuI GAANNNNNNNTTGG 1 cut(s) 2976
Alw26I GTCTC 7 cut(s) 304, 1185, 1267, 1658, 2177, 2639, 2665
AlwI GGATC 8 cut(s) 589, 913, 1321, 1590, 1957, 2412, 2680, 2693
AoxI GGCC 7 cut(s) 658, 1065, 1506, 1773, 2198, 2608, 2753
ApeKI GCWGC 4 cut(s) 210, 246, 1201, 2694
AseI ATTAAT 1 cut(s) 1098
Asp700I GAANNNNTTC 2 cut(s) 1420, 1538
Asp718I GGTACC 2 cut(s) 829, 1469
AspS9I GGNCC 6 cut(s) 195, 659, 731, 2021, 2165, 2753
AsuC2I CCSGG 1 cut(s) 931
AsuHPI GGTGA 3 cut(s) 1766, 2255, 2549
AsuII TTCGAA 1 cut(s) 173
AvaII GGWCC 4 cut(s) 195, 731, 2021, 2165
BaeGI GKGCMC 1 cut(s) 2352
BamHI GGATCC 1 cut(s) 2685
BanI GGYRCC 3 cut(s) 829, 1469, 2192
BarI GAAGNNNNNNTAC 2 cut(s) 1302, 1334
BbsI GAAGAC 2 cut(s) 1394, 2120
BbvCI CCTCAGC 2 cut(s) 576, 2976
BbvI GCAGC 4 cut(s) 222, 258, 1188, 2681
BccI CCATC 7 cut(s) 361, 2278, 2395, 2554, 2579, 2607, 2916
BceAI ACGGC 2 cut(s) 1788, 2879
BciT130I CCWGG 5 cut(s) 827, 1198, 1605, 2197, 2253
BclI TGATCA 2 cut(s) 36, 556
BcnI CCSGG 1 cut(s) 931
BcoDI GTCTC 7 cut(s) 304, 1185, 1267, 1658, 2177, 2639, 2665
BfaI CTAG 6 cut(s) 1566, 1649, 1734, 1994, 2039, 2396
BfmI CTRYAG 1 cut(s) 2938
BfrI CTTAAG 1 cut(s) 775
BfuAI ACCTGC 1 cut(s) 2324
BisI GCNGC 5 cut(s) 211, 247, 1202, 2608, 2695
BlsI GCNGC 5 cut(s) 212, 248, 1203, 2609, 2696
Bme1390I CCNGG 6 cut(s) 827, 931, 1198, 1605, 2197, 2253
Bme18I GGWCC 4 cut(s) 195, 731, 2021, 2165
BmgT120I GGNCC 6 cut(s) 195, 659, 731, 2021, 2165, 2753
BmiI GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2167, 2194, 2687, 2754
BmrFI CCNGG 6 cut(s) 827, 931, 1198, 1605, 2197, 2253
BmsI GCATC 2 cut(s) 1913, 2083
BpiI GAAGAC 2 cut(s) 1394, 2120
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 2 cut(s) 610, 2850
Bpu10I CCTNAGC 2 cut(s) 576, 2976
Bpu14I TTCGAA 1 cut(s) 173
BpuEI CTTGAG 3 cut(s) 1151, 1399, 2797
BpuMI CCSGG 1 cut(s) 931
BsaAI YACGTR 1 cut(s) 2414
BsaI GGTCTC 2 cut(s) 1658, 2177
BsaJI CCNNGG 4 cut(s) 1196, 1770, 2071, 2475
BsaWI WCCGGW 4 cut(s) 197, 733, 886, 1235
Bsc4I CCNNNNNNNGG 4 cut(s) 1203, 1397, 2828, 2980
Bse1I ACTGG 3 cut(s) 593, 1041, 2520
Bse3DI GCAATG 3 cut(s) 104, 1837, 2286
BseBI CCWGG 5 cut(s) 827, 1198, 1605, 2197, 2253
BseDI CCNNGG 4 cut(s) 1196, 1770, 2071, 2475
BseGI GGATG 5 cut(s) 60, 1073, 2180, 2549, 2955
BseLI CCNNNNNNNGG 4 cut(s) 1203, 1397, 2828, 2980
BseMI GCAATG 3 cut(s) 104, 1837, 2286
BseMII CTCAG 9 cut(s) 486, 567, 614, 1913, 1991, 2172, 2594, 2714, 2990
BseNI ACTGG 3 cut(s) 593, 1041, 2520
BseRI GAGGAG 2 cut(s) 1945, 2748
BseSI GKGCMC 1 cut(s) 2352
BseXI GCAGC 4 cut(s) 222, 258, 1188, 2681
BsgI GTGCAG 1 cut(s) 2680
BshFI GGCC 7 cut(s) 660, 1067, 1508, 1775, 2200, 2610, 2755
BshNI GGYRCC 3 cut(s) 829, 1469, 2192
BsiSI CCGG 6 cut(s) 198, 734, 887, 930, 956, 1236
BslFI GGGAC 3 cut(s) 946, 1127, 1686
BslI CCNNNNNNNGG 4 cut(s) 1203, 1397, 2828, 2980
BsmAI GTCTC 7 cut(s) 304, 1185, 1267, 1658, 2177, 2639, 2665
BsmFI GGGAC 3 cut(s) 946, 1127, 1686
BsmI GAATGC 1 cut(s) 188
BsnI GGCC 7 cut(s) 660, 1067, 1508, 1775, 2200, 2610, 2755
Bso31I GGTCTC 2 cut(s) 1658, 2177
Bsp119I TTCGAA 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 2352
Bsp1407I TGTACA 1 cut(s) 1278
BspACI CCGC 3 cut(s) 786, 1204, 2607
BspANI GGCC 7 cut(s) 660, 1067, 1508, 1775, 2200, 2610, 2755
BspCNI CTCAG 9 cut(s) 487, 568, 615, 1912, 1992, 2173, 2595, 2713, 2989
BspHI TCATGA 1 cut(s) 667
BspLI GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2167, 2194, 2687, 2754
BspMI ACCTGC 1 cut(s) 2324
BspPI GGATC 8 cut(s) 589, 913, 1321, 1590, 1957, 2412, 2680, 2693
BspT104I TTCGAA 1 cut(s) 173
BspT107I GGYRCC 3 cut(s) 829, 1469, 2192
BspTI CTTAAG 1 cut(s) 775
BspTNI GGTCTC 2 cut(s) 1658, 2177
BsrBI CCGCTC 1 cut(s) 2607
BsrDI GCAATG 3 cut(s) 104, 1837, 2286
BsrGI TGTACA 1 cut(s) 1278
BsrI ACTGG 3 cut(s) 593, 1041, 2520
BssECI CCNNGG 4 cut(s) 1196, 1770, 2071, 2475
BssNAI GTATAC 1 cut(s) 1739
BssT1I CCWWGG 2 cut(s) 2071, 2475
Bst1107I GTATAC 1 cut(s) 1739
Bst2UI CCWGG 5 cut(s) 827, 1198, 1605, 2197, 2253
Bst4CI ACNGT 3 cut(s) 70, 843, 2234
Bst6I CTCTTC 2 cut(s) 35, 1270
BstAFI CTTAAG 1 cut(s) 775
BstAUI TGTACA 1 cut(s) 1278
BstBAI YACGTR 1 cut(s) 2414
BstBI TTCGAA 1 cut(s) 173
BstC8I GCNNGC 1 cut(s) 515
BstDSI CCRYGG 1 cut(s) 1770
BstF5I GGATG 5 cut(s) 60, 1073, 2180, 2549, 2955
BstMAI GTCTC 7 cut(s) 304, 1185, 1267, 1658, 2177, 2639, 2665
BstNI CCWGG 5 cut(s) 827, 1198, 1605, 2197, 2253
BstNSI RCATGY 2 cut(s) 517, 2110
BstSCI CCNGG 6 cut(s) 825, 929, 1196, 1603, 2195, 2251
BstSFI CTRYAG 1 cut(s) 2938
BstSLI GKGCMC 1 cut(s) 2352
BstSNI TACGTA 1 cut(s) 2414
BstV1I GCAGC 4 cut(s) 222, 258, 1188, 2681
BstV2I GAAGAC 2 cut(s) 1394, 2120
BstX2I RGATCY 6 cut(s) 581, 905, 1582, 1949, 2404, 2685
BstXI CCANNNNNNTGG 1 cut(s) 2482
BstYI RGATCY 6 cut(s) 581, 905, 1582, 1949, 2404, 2685
BstZ17I GTATAC 1 cut(s) 1739
BsuRI GGCC 7 cut(s) 660, 1067, 1508, 1775, 2200, 2610, 2755
BtgI CCRYGG 1 cut(s) 1770
BtsCI GGATG 5 cut(s) 60, 1073, 2180, 2549, 2955
BtsIMutI CAGTG 3 cut(s) 586, 1034, 2863
BveI ACCTGC 1 cut(s) 2324
Cac8I GCNNGC 1 cut(s) 515
CciI TCATGA 1 cut(s) 667
Cfr13I GGNCC 6 cut(s) 195, 659, 731, 2021, 2165, 2753
CsiI ACCWGGT 1 cut(s) 2251
Csp6I GTAC 7 cut(s) 189, 830, 1270, 1279, 1470, 2411, 2935
CspCI CAANNNNNGTGG 2 cut(s) 1819, 1854
CviAII CATG 7 cut(s) 165, 261, 514, 668, 700, 2107, 2271
CviQI GTAC 7 cut(s) 189, 830, 1270, 1279, 1470, 2411, 2935
DrdI GACNNNNNNGTC 1 cut(s) 2075
DseDI GACNNNNNNGTC 1 cut(s) 2075
EaeI YGGCCR 2 cut(s) 2198, 2608
Eam1104I CTCTTC 2 cut(s) 35, 1270
EarI CTCTTC 2 cut(s) 35, 1270
Eco105I TACGTA 1 cut(s) 2414
Eco130I CCWWGG 2 cut(s) 2071, 2475
Eco147I AGGCCT 1 cut(s) 1508
Eco31I GGTCTC 2 cut(s) 1658, 2177
Eco47I GGWCC 4 cut(s) 195, 731, 2021, 2165
Eco57I CTGAAG 3 cut(s) 290, 1388, 1481
EcoO109I RGGNCCY 2 cut(s) 659, 2753
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 5 cut(s) 825, 1196, 1603, 2195, 2251
EcoT14I CCWWGG 2 cut(s) 2071, 2475
ErhI CCWWGG 2 cut(s) 2071, 2475
FaeI CATG 7 cut(s) 168, 264, 517, 671, 703, 2110, 2274
FalI AAGNNNNNCTT 2 cut(s) 2623, 2655
FaqI GGGAC 3 cut(s) 946, 1127, 1686
FatI CATG 7 cut(s) 164, 260, 513, 667, 699, 2106, 2270
FbaI TGATCA 2 cut(s) 36, 556
FblI GTMKAC 2 cut(s) 1738, 2488
Fnu4HI GCNGC 5 cut(s) 211, 247, 1202, 2608, 2695
FokI GGATG 5 cut(s) 47, 1060, 2187, 2536, 2942
Fsp4HI GCNGC 5 cut(s) 211, 247, 1202, 2608, 2695
FspBI CTAG 6 cut(s) 1566, 1649, 1734, 1994, 2039, 2396
GluI GCNGC 5 cut(s) 211, 247, 1202, 2608, 2695
GsuI CTGGAG 2 cut(s) 610, 2850
HaeIII GGCC 7 cut(s) 660, 1067, 1508, 1775, 2200, 2610, 2755
HapII CCGG 6 cut(s) 198, 734, 887, 930, 956, 1236
Hin1II CATG 7 cut(s) 168, 264, 517, 671, 703, 2110, 2274
HincII GTYRAC 2 cut(s) 633, 850
HindII GTYRAC 2 cut(s) 633, 850
HindIII AAGCTT 6 cut(s) 368, 683, 763, 1127, 2053, 2204
HpaII CCGG 6 cut(s) 198, 734, 887, 930, 956, 1236
HphI GGTGA 3 cut(s) 1766, 2255, 2549
Hpy166II GTNNAC 5 cut(s) 73, 633, 850, 1739, 2489
Hpy8I GTNNAC 5 cut(s) 73, 633, 850, 1739, 2489
Hpy99I CGWCG 1 cut(s) 2900
HpyAV CCTTC 5 cut(s) 1304, 1505, 2269, 2676, 2737
HpyCH4III ACNGT 3 cut(s) 70, 843, 2234
HpyCH4IV ACGT 2 cut(s) 2413, 2562
HpySE526I ACGT 2 cut(s) 2413, 2562
Hsp92II CATG 7 cut(s) 168, 264, 517, 671, 703, 2110, 2274
KpnI GGTACC 2 cut(s) 833, 1473
Ksp22I TGATCA 2 cut(s) 36, 556
LmnI GCTCC 3 cut(s) 591, 803, 2330
Lsp1109I GCAGC 4 cut(s) 222, 258, 1188, 2681
LweI GCATC 2 cut(s) 1913, 2083
MabI ACCWGGT 1 cut(s) 2251
MaeI CTAG 6 cut(s) 1566, 1649, 1734, 1994, 2039, 2396
MaeII ACGT 2 cut(s) 2413, 2562
MbiI CCGCTC 1 cut(s) 2607
MfeI CAATTG 4 cut(s) 1052, 1618, 2044, 2360
MflI RGATCY 6 cut(s) 581, 905, 1582, 1949, 2404, 2685
MhlI GDGCHC 1 cut(s) 2352
MlyI GAGTC 9 cut(s) 260, 306, 774, 953, 957, 1418, 1891, 2085, 2585
MmeI TCCRAC 6 cut(s) 211, 316, 1101, 1173, 1497, 2175
MroXI GAANNNNTTC 2 cut(s) 1420, 1538
MspA1I CMGCKG 1 cut(s) 2980
MspCI CTTAAG 1 cut(s) 775
MspI CCGG 6 cut(s) 198, 734, 887, 930, 956, 1236
MspR9I CCNGG 6 cut(s) 827, 931, 1198, 1605, 2197, 2253
MunI CAATTG 4 cut(s) 1052, 1618, 2044, 2360
Mva1269I GAATGC 1 cut(s) 188
MvaI CCWGG 5 cut(s) 827, 1198, 1605, 2197, 2253
NciI CCSGG 1 cut(s) 931
NlaIII CATG 7 cut(s) 168, 264, 517, 671, 703, 2110, 2274
NlaIV GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2167, 2194, 2687, 2754
NmuCI GTSAC 2 cut(s) 1032, 2901
NspI RCATGY 2 cut(s) 517, 2110
NspV TTCGAA 1 cut(s) 173
PaeI GCATGC 1 cut(s) 517
PagI TCATGA 1 cut(s) 667
PaqCI CACCTGC 1 cut(s) 2324
PceI AGGCCT 1 cut(s) 1508
PctI GAATGC 1 cut(s) 188
PdmI GAANNNNTTC 2 cut(s) 1420, 1538
PfeI GAWTC 8 cut(s) 101, 671, 689, 914, 1501, 1520, 1600, 1878
PflFI GACNNNGTC 1 cut(s) 637
PfoI TCCNGGA 1 cut(s) 929
PkrI GCNGC 5 cut(s) 212, 248, 1203, 2609, 2696
PleI GAGTC 9 cut(s) 259, 306, 774, 953, 956, 1417, 1891, 2084, 2584
PpsI GAGTC 9 cut(s) 259, 306, 774, 953, 956, 1417, 1891, 2084, 2584
Ppu21I YACGTR 1 cut(s) 2414
PshBI ATTAAT 1 cut(s) 1098
PsiI TTATAA 1 cut(s) 474
Psp6I CCWGG 5 cut(s) 825, 1196, 1603, 2195, 2251
PspGI CCWGG 5 cut(s) 825, 1196, 1603, 2195, 2251
PspN4I GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2167, 2194, 2687, 2754
PspPI GGNCC 6 cut(s) 195, 659, 731, 2021, 2165, 2753
PsuI RGATCY 6 cut(s) 581, 905, 1582, 1949, 2404, 2685
PsyI GACNNNGTC 1 cut(s) 637
PvuII CAGCTG 1 cut(s) 2980
RsaI GTAC 7 cut(s) 190, 831, 1271, 1280, 1471, 2412, 2936
RsaNI GTAC 7 cut(s) 189, 830, 1270, 1279, 1470, 2411, 2935
SatI GCNGC 5 cut(s) 211, 247, 1202, 2608, 2695
Sau96I GGNCC 6 cut(s) 195, 659, 731, 2021, 2165, 2753
SchI GAGTC 9 cut(s) 260, 306, 774, 953, 957, 1418, 1891, 2085, 2585
ScrFI CCNGG 6 cut(s) 827, 931, 1198, 1605, 2197, 2253
SduI GDGCHC 1 cut(s) 2352
SexAI ACCWGGT 1 cut(s) 2251
SfaNI GCATC 2 cut(s) 1913, 2083
SfcI CTRYAG 1 cut(s) 2938
SfuI TTCGAA 1 cut(s) 173
SinI GGWCC 4 cut(s) 195, 731, 2021, 2165
SmlI CTYRAG 4 cut(s) 775, 1130, 1378, 2812
SmoI CTYRAG 4 cut(s) 775, 1130, 1378, 2812
SnaBI TACGTA 1 cut(s) 2414
SphI GCATGC 1 cut(s) 517
SseBI AGGCCT 1 cut(s) 1508
SsiI CCGC 3 cut(s) 786, 1204, 2607
SspI AATATT 1 cut(s) 708
SspMI CTAG 6 cut(s) 1566, 1649, 1734, 1994, 2039, 2396
StuI AGGCCT 1 cut(s) 1508
StyD4I CCNGG 6 cut(s) 825, 929, 1196, 1603, 2195, 2251
StyI CCWWGG 2 cut(s) 2071, 2475
TaaI ACNGT 3 cut(s) 70, 843, 2234
TaiI ACGT 2 cut(s) 2416, 2565
TatI WGTACW 2 cut(s) 188, 1278
TauI GCSGC 1 cut(s) 2610
TfiI GAWTC 8 cut(s) 101, 671, 689, 914, 1501, 1520, 1600, 1878
TscAI CASTG 3 cut(s) 593, 1041, 2863
TseFI GTSAC 2 cut(s) 1032, 2901
TseI GCWGC 4 cut(s) 210, 246, 1201, 2694
Tsp45I GTSAC 2 cut(s) 1032, 2901
TspDTI ATGAA 7 cut(s) 656, 684, 1413, 1678, 1750, 2307, 2820
TspGWI ACGGA 1 cut(s) 2478
TspRI CASTG 3 cut(s) 593, 1041, 2863
Tth111I GACNNNGTC 1 cut(s) 637
Vha464I CTTAAG 1 cut(s) 775
VpaK11BI GGWCC 4 cut(s) 195, 731, 2021, 2165
VspI ATTAAT 1 cut(s) 1098
XbaI TCTAGA 1 cut(s) 2395
XceI RCATGY 2 cut(s) 517, 2110
XmiI GTMKAC 2 cut(s) 1738, 2488
XmnI GAANNNNTTC 2 cut(s) 1420, 1538
XspI CTAG 6 cut(s) 1566, 1649, 1734, 1994, 2039, 2396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.