RchiOBHm_Chr3g0478451

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000047
Physical Location & Seq
Forward (+)
24206406 .. 24210175
3770 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44363

Sequence Viewer

Length: 3723 bp
ATGCCCACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACAACCACTGTTTCTAACCTCATCCCCGCAGTTCACAGCAACTGCATTGAAGCCCAGCAACAATCATTGCTCCATTTCAAGAAAAGTCTTGAATTTGATTCTTCCGAATCCTCCAAGCTTATCACATGGAATTCGAGTACTGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACCAATGGGCTTGTTGTCGGACTTGACCTCAGCAGCGAGTCTATCTCATGCAACATTGACAATTCAAGCAGTCTCTTCCAACTTCAACATCTTCAGAGCCTCAATTTGGCCGATAACAGCTTCAGAAGCTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATCTGAATTTAAGTGATGCTTTTTTTCCTGGGGTTATTCCCATTGAGATTTCACACTTAACCAGGCTGATAACTCTTGATCTCTCTGATAATTTCTCCCCTTTCTCCCCCTTTTTTGCTGAGAACCCGAATTTAAGCATGCTAATTCAGAACCTCACAGAGCTTACAGAGTTATATCTTGATTCAGTAGAGATATCAGGACAGGGAAGTGACTGGTGTGAAGCCATATCATCTTCACTGCCAAATCTGAGAGTGTTAAGCTTGTCTCGTTGTGGTCTTTCAGGCCCTATATGTGACTCCCTTGCAAAGCTTCAATCTCTGTATGATATTGACTTGTCACTTAACTCCTTCTATGCTCCGGTTCCAAGAGTCTTTGCCAGTTTTTCAAACTTGACTTACCTGAGTCTTAGTTATTCCTACTTGCTCGGAACATTTCCCCAAGAGATCTTTCAGATACCTTCCCTACAAACCATTGGCCTTTCTGGTAATGGTGTTCTTCATGGTTCCTTTCCAGAATTTCCAAACAATGGGTCTCTTCGATCCTTAATTGTAGATGGGACAAGTTTTTCAGGTGACCTACCCAACTCTATTGGAAATCTTAAGATGCTGTCGAGAATAGATATTTCAAATTCCAAGTTCACCGGATCAGTTCCCAAGTCGATTGAAAACCTCACAGAATTGGCTGACCTGGACATGTCAGGAAACAGATTTAATAGTCCCATTAGTTCTATTCACTGGGAAACCCTTGTTAATCTGGAACTCCTCGATTTGAGCAACAATCAACTCTATGGGACTATTCCTTCATCTGTTGTTTCTCTTCCCAAACTGGAAACATTAACATTATCCCAAAATCAACTCTCGGGTCAAGTCCCTGAATTTTCCAATACCTCTTCGCACTTACTTGAGAGTCTTTATTTGGAAAACAACAATTTGGAAGGACAAATACCAACATCTATCTTCAATCTTCAAGGTCTTGAAGATCTTTATCTTTCTTCAAACAACTTCAGTAGCTTCCCTTTTTGTGGTCCTCAAGTGCCCAGAAAGCTTTCATTGGTTGATCTTTCCCACAATAGCTTGTTGTTTGATTGCAATGGCACCAATTCCTCCTCCCTTCAGATTGAGACCTTGGTATTGGCTTCTAACAAGTTGAGAGCGTTCCCAGACTTCTTGAGAAATCAGTCCACATTAGGCTACTTGGACCTTTCAAACAACCAGATTCAAGGCGAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTAATCTTTCTGTCAACTCCTTGATGACTCTAGAAGCTCCTCTTCCTAATTCCACTTCTACTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGTGAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTAGCAACTCCTTGGTGACTCTAGAAGCTCCTCTTCCTAATTCCACTTCTACTTTATCTTCTCTGGACCTTCATTCCAACATGCTTCAAGGCGAGATACCTAATTGGATTTTGAGTCTCCAAACTCTTAATTCCCTTGATCTTTCTAGCAACTCCTTGGTGTCTCTAGAAGATCCTCTTCCTAATTCCACTTCTACTTTATCTTCTCTGGACCTTCATTCCAACAAACTTCTAGGTATCCATTCCTCATATTCCTTCCTTCAGCTTGGTCACTTGGGATTAGCTTCTAACAAGCTGACAACATTCCCAGACTTCTTGAGAAATCAATCCTATCTAACCTACTTGGACCTCTCAGACAACCAGATTCAAGGACAGATACCCAATTGGATTTGGAGTTTCGAACTTCAAGATCTAAATCTTTCTTGTAACTCCTTGGAAAGTTTAGAAGCTCCTCTACTTAATTCTACCTATGTTCTTTCAACGGTTGATCTTCATTCAAACCAGCTTCAGGGATATTTCCCCTTGTTCTTAAGTAGTAGCTATCTAGATTTTTCAAGAAATAATTTCAGCTCTAGTATACCGATTGACTTTGGTGACTTCATTTTTACTGGGTCTTACCTTTCTCTTTCAAGCAATAACTTTCAAGAGGGCATTCCAGAATCAATATGTAATGCAAGGGTTAAGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGAAACATTCCCCAATGCTTGACTCAATCACTTTCGCATTTGGTCATTGATTTGAGAAGAAACAATCTAAGTGGCACAATTCCTGATAATTTTCTCAAGGGTTGTGAGCTACAAACTCTAGACCTCAGCAACAATCAGATACAAGGCCGAGTTCCGAAATCTCTTGTCAACTGCTCAAGGTTAGAGGTTTTAAACATTGGAAACAATAACATAATTGATACTTTTCCATGCTTTTTAATGAGCTTATCCACCTTGCGTGTCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAGCATTGGATGTCCTCAGACCAATGACACATGGCCTGTGCTTCAAATAATAGATTTAGCTCACAACAATTTCAACGGTGATATGCCGGGAAGATTGTCTCTGACATGGCAAGCTATGGTGTCTAATGAAGATGATTCTCTAACTAACCTTGGATTTTCTTATCAACCTGGCAGGAGTAATAGATATAACAATACGTATAATAGAGATTATTATTCGTATAATGGAGAAACAGGTGCTGACGTTTATTATAGAGATGCAATTACGACTATCATCAAAGGTTTAGAGTTGTATGTGGTTAAGATTCTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCACTACATGTCCTCAACTTATCAGGTAATGCTTTCACTGGAAAAATACCATCATCATTTGGCAAGATGCGACAACTGGAGTCCTTAGATCTCTCAAAGAACCACCTGAGCGGCCAAATTCCCCCACAGTTTGCAAATCTCACTTTCCTTGCGTTCTTGGATCTCTCAAATAATGAACTGGTCGGGAAGATCCCAAGCAGCACTCAAATTTCAACATTTCCAAATGCCTCTTTCGAAGGTAACAAAGGATTATGGGGACCTCCTTTGACAATGGATGCAATATTGCCATCCCCAATTACAGATGGAAGCTCAAATAATCCGAATTTTGGAGATGAGATTGATTGGGATGTTATCTGTTTTGAAATTGGATTTACATGTGGGTTTGGAATTGCCATCGGGTCACTTTTGTTTTGCAAAAGATGGAGGAAATGGTATTACAGAGCTATGCGTAGTATTCTTTTCAAGATATTCCCTCAACTGGAGCAGAGATTTGGTAATTATAGAAGACATGTCTACGTAAACGCAAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1240

Amino Acids

137.28

Weight (kDa)

4.86

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 6.2e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 91 - 285 1.4e-10 Leucine-rich repeat region
LRR_8 PF13855 234 - 291 3.6e-06 Leucine rich repeat
LRR_8 PF13855 366 - 414 4.5e-06 Leucine rich repeat
LRR_8 PF13855 855 - 910 4.3e-07 Leucine rich repeat
LRR_8 PF13855 875 - 934 6.6e-07 Leucine rich repeat
LRR_4 PF12799 875 - 914 1.1e-07 Leucine Rich repeats (2 copies)
LRR_14 PF23598 1054 - 1120 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 1064 - 1123 3.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1478
AccB7I CCANNNNNTGG 1 cut(s) 911
AccBSI CCGCTC 1 cut(s) 3300
AccI GTMKAC 2 cut(s) 2380, 3702
AciI CCGC 3 cut(s) 66, 2788, 3300
AclWI GGATC 6 cut(s) 918, 1036, 1970, 3166, 3357, 3373
AcoI YGGCCR 2 cut(s) 321, 3301
AcuI CTGAAG 6 cut(s) 290, 319, 1372, 1481, 2048, 2294
AfaI GTAC 1 cut(s) 178
AfiI CCNNNNNNNGG 6 cut(s) 319, 911, 1406, 2311, 3515, 3667
AflII CTTAAG 2 cut(s) 983, 2332
AflIII ACRYGT 4 cut(s) 1077, 3196, 3563, 3697
AjnI CCWGG 4 cut(s) 412, 446, 1071, 2974
AjuI GAANNNNNNNTTGG 2 cut(s) 816, 848
Alw26I GTCTC 9 cut(s) 290, 654, 921, 1499, 1637, 1781, 1925, 1971, 2910
AlwI GGATC 6 cut(s) 918, 1036, 1970, 3166, 3357, 3373
AlwNI CAGNNNCTG 2 cut(s) 81, 3044
Ama87I CYCGRG 1 cut(s) 1243
AoxI GGCC 6 cut(s) 321, 667, 859, 2662, 2840, 3301
ApeKI GCWGC 3 cut(s) 210, 246, 3387
ArsI GACNNNNNNTTYG 2 cut(s) 899, 931
Asp700I GAANNNNTTC 2 cut(s) 343, 1429
AspS9I GGNCC 9 cut(s) 668, 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
AsuC2I CCSGG 1 cut(s) 2895
AsuHPI GGTGA 7 cut(s) 968, 1015, 1763, 1831, 2408, 2897, 3115
AsuII TTCGAA 2 cut(s) 2202, 3423
AvaI CYCGRG 1 cut(s) 1243
AvaII GGWCC 8 cut(s) 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
AxyI CCTNAGG 1 cut(s) 3168
BaeGI GKGCMC 1 cut(s) 1422
BanI GGYRCC 1 cut(s) 1478
BarI GAAGNNNNNNTAC 4 cut(s) 1311, 1343, 2241, 2273
BbsI GAAGAC 1 cut(s) 3700
BbvCI CCTCAGC 2 cut(s) 242, 2642
BbvI GCAGC 3 cut(s) 222, 258, 3399
BccI CCATC 7 cut(s) 361, 932, 3247, 3484, 3485, 3590, 3603
BciT130I CCWGG 4 cut(s) 414, 448, 1073, 2976
BciVI GTATCC 1 cut(s) 2051
BcnI CCSGG 1 cut(s) 2895
BcoDI GTCTC 9 cut(s) 290, 654, 921, 1499, 1637, 1781, 1925, 1971, 2910
BfaI CTAG 9 cut(s) 1682, 1806, 1826, 1950, 1970, 2036, 2348, 2376, 2636
BfrI CTTAAG 2 cut(s) 983, 2332
BfuI GTATCC 1 cut(s) 2051
BglII AGATCT 4 cut(s) 828, 1363, 2212, 3277
BisI GCNGC 4 cut(s) 211, 247, 3301, 3388
BlsI GCNGC 4 cut(s) 212, 248, 3302, 3389
BmcAI AGTACT 1 cut(s) 178
Bme1390I CCNGG 5 cut(s) 414, 448, 1073, 2895, 2976
Bme18I GGWCC 8 cut(s) 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
BmeT110I CYCGRG 1 cut(s) 1243
BmgT120I GGNCC 9 cut(s) 668, 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
BmiI GGNNCC 4 cut(s) 747, 889, 1480, 3447
BmrFI CCNGG 5 cut(s) 414, 448, 1073, 2895, 2976
BmrI ACTGGG 2 cut(s) 1129, 2421
BmsI GCATC 5 cut(s) 391, 978, 3052, 3246, 3454
BmuI ACTGGG 2 cut(s) 1129, 2421
BpiI GAAGAC 1 cut(s) 3700
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 2 cut(s) 3287, 3689
Bpu10I CCTNAGC 3 cut(s) 242, 2642, 3296
Bpu14I TTCGAA 2 cut(s) 2202, 3423
BpuEI CTTGAG 7 cut(s) 1307, 1398, 1573, 2140, 2533, 2597, 2677
BpuMI CCSGG 1 cut(s) 2895
BsaAI YACGTR 2 cut(s) 3003, 3706
BsaBI GATNNNNATC 2 cut(s) 1368, 2217
BsaI GGTCTC 2 cut(s) 921, 1499
BsaJI CCNNGG 6 cut(s) 413, 1509, 1815, 1959, 2235, 2956
BsaWI WCCGGW 2 cut(s) 742, 1025
BsaXI ACNNNNNCTCC 2 cut(s) 3125, 3155
Bsc4I CCNNNNNNNGG 6 cut(s) 319, 911, 1406, 2311, 3515, 3667
Bse1I ACTGG 9 cut(s) 602, 762, 1124, 1215, 2416, 3232, 3270, 3372, 3672
Bse21I CCTNAGG 1 cut(s) 3168
Bse3DI GCAATG 2 cut(s) 104, 1480
Bse8I GATNNNNATC 2 cut(s) 1368, 2217
BseBI CCWGG 4 cut(s) 414, 448, 1073, 2976
BseDI CCNNGG 6 cut(s) 413, 1509, 1815, 1959, 2235, 2956
BseGI GGATG 5 cut(s) 60, 2822, 3469, 3476, 3541
BseJI GATNNNNATC 2 cut(s) 1368, 2217
BseLI CCNNNNNNNGG 6 cut(s) 319, 911, 1406, 2311, 3515, 3667
BseMI GCAATG 2 cut(s) 104, 1480
BseMII CTCAG 9 cut(s) 256, 495, 623, 776, 2169, 2656, 2837, 3159, 3287
BseNI ACTGG 9 cut(s) 602, 762, 1124, 1215, 2416, 3232, 3270, 3372, 3672
BseRI GAGGAG 6 cut(s) 1136, 1480, 1680, 1824, 2244, 3130
BseSI GKGCMC 1 cut(s) 1422
BseXI GCAGC 3 cut(s) 222, 258, 3399
BseYI CCCAGC 1 cut(s) 93
BshFI GGCC 6 cut(s) 323, 669, 861, 2664, 2842, 3303
BshNI GGYRCC 1 cut(s) 1478
BsiHKCI CYCGRG 1 cut(s) 1243
BsiSI CCGG 3 cut(s) 743, 1026, 2894
BslFI GGGAC 5 cut(s) 955, 1086, 1189, 1238, 3459
BslI CCNNNNNNNGG 6 cut(s) 319, 911, 1406, 2311, 3515, 3667
BsmAI GTCTC 9 cut(s) 290, 654, 921, 1499, 1637, 1781, 1925, 1971, 2910
BsmFI GGGAC 5 cut(s) 955, 1086, 1189, 1238, 3459
BsmI GAATGC 1 cut(s) 2454
BsnI GGCC 6 cut(s) 323, 669, 861, 2664, 2842, 3303
Bso31I GGTCTC 2 cut(s) 921, 1499
BsoBI CYCGRG 1 cut(s) 1243
Bsp119I TTCGAA 2 cut(s) 2202, 3423
Bsp1286I GDGCHC 1 cut(s) 1422
BspACI CCGC 3 cut(s) 66, 2788, 3300
BspANI GGCC 6 cut(s) 323, 669, 861, 2664, 2842, 3303
BspCNI CTCAG 9 cut(s) 255, 496, 624, 777, 2168, 2655, 2836, 3160, 3288
BspLI GGNNCC 4 cut(s) 747, 889, 1480, 3447
BspPI GGATC 6 cut(s) 918, 1036, 1970, 3166, 3357, 3373
BspQI GCTCTTC 1 cut(s) 349
BspT104I TTCGAA 2 cut(s) 2202, 3423
BspT107I GGYRCC 1 cut(s) 1478
BspTI CTTAAG 2 cut(s) 983, 2332
BspTNI GGTCTC 2 cut(s) 921, 1499
BsrBI CCGCTC 1 cut(s) 3300
BsrDI GCAATG 2 cut(s) 104, 1480
BsrI ACTGG 9 cut(s) 602, 762, 1124, 1215, 2416, 3232, 3270, 3372, 3672
BssECI CCNNGG 6 cut(s) 413, 1509, 1815, 1959, 2235, 2956
BssNAI GTATAC 1 cut(s) 2381
BssT1I CCWWGG 5 cut(s) 1509, 1815, 1959, 2235, 2956
Bst1107I GTATAC 1 cut(s) 2381
Bst2UI CCWGG 4 cut(s) 414, 448, 1073, 2976
Bst4CI ACNGT 4 cut(s) 49, 2287, 2885, 3318
Bst6I CTCTTC 8 cut(s) 293, 349, 924, 1206, 1279, 1698, 1842, 1986
BstAFI CTTAAG 2 cut(s) 983, 2332
BstBAI YACGTR 2 cut(s) 3003, 3706
BstBI TTCGAA 2 cut(s) 2202, 3423
BstC8I GCNNGC 2 cut(s) 524, 2919
BstEII GGTNACC 1 cut(s) 956
BstF5I GGATG 5 cut(s) 60, 2822, 3469, 3476, 3541
BstMAI GTCTC 9 cut(s) 290, 654, 921, 1499, 1637, 1781, 1925, 1971, 2910
BstMWI GCNNNNNNNGC 2 cut(s) 339, 1426
BstNI CCWGG 4 cut(s) 414, 448, 1073, 2976
BstNSI RCATGY 6 cut(s) 526, 1081, 1888, 3200, 3567, 3701
BstPI GGTNACC 1 cut(s) 956
BstSCI CCNGG 5 cut(s) 412, 446, 1071, 2893, 2974
BstSLI GKGCMC 1 cut(s) 1422
BstSNI TACGTA 2 cut(s) 3003, 3706
BstV1I GCAGC 3 cut(s) 222, 258, 3399
BstV2I GAAGAC 1 cut(s) 3700
BstX2I RGATCY 7 cut(s) 828, 1363, 1975, 2212, 3277, 3349, 3378
BstYI RGATCY 7 cut(s) 828, 1363, 1975, 2212, 3277, 3349, 3378
BstZ17I GTATAC 1 cut(s) 2381
Bsu36I CCTNAGG 1 cut(s) 3168
BsuI GTATCC 1 cut(s) 2051
BsuRI GGCC 6 cut(s) 323, 669, 861, 2664, 2842, 3303
BtsCI GGATG 5 cut(s) 60, 2822, 3469, 3476, 3541
BtsI GCAGTG 1 cut(s) 620
BtsIMutI CAGTG 4 cut(s) 45, 620, 1117, 3225
Cac8I GCNNGC 2 cut(s) 524, 2919
CaiI CAGNNNCTG 2 cut(s) 81, 3044
Cfr13I GGNCC 9 cut(s) 668, 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
Csp6I GTAC 1 cut(s) 177
CspCI CAANNNNNGTGG 2 cut(s) 2569, 2604
CviQI GTAC 1 cut(s) 177
DraI TTTAAA 1 cut(s) 2709
EaeI YGGCCR 2 cut(s) 321, 3301
Eam1104I CTCTTC 8 cut(s) 293, 349, 924, 1206, 1279, 1698, 1842, 1986
EarI CTCTTC 8 cut(s) 293, 349, 924, 1206, 1279, 1698, 1842, 1986
Eco105I TACGTA 2 cut(s) 3003, 3706
Eco130I CCWWGG 5 cut(s) 1509, 1815, 1959, 2235, 2956
Eco31I GGTCTC 2 cut(s) 921, 1499
Eco32I GATATC 1 cut(s) 579
Eco47I GGWCC 8 cut(s) 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
Eco57I CTGAAG 6 cut(s) 290, 319, 1372, 1481, 2048, 2294
Eco81I CCTNAGG 1 cut(s) 3168
Eco88I CYCGRG 1 cut(s) 1243
Eco91I GGTNACC 1 cut(s) 956
EcoO109I RGGNCCY 2 cut(s) 668, 3446
EcoO65I GGTNACC 1 cut(s) 956
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 4 cut(s) 412, 446, 1071, 2974
EcoRV GATATC 1 cut(s) 579
EcoT14I CCWWGG 5 cut(s) 1509, 1815, 1959, 2235, 2956
ErhI CCWWGG 5 cut(s) 1509, 1815, 1959, 2235, 2956
FalI AAGNNNNNCTT 8 cut(s) 388, 420, 1677, 1709, 1821, 1853, 1965, 1997
FaqI GGGAC 5 cut(s) 955, 1086, 1189, 1238, 3459
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 2 cut(s) 2380, 3702
Fnu4HI GCNGC 4 cut(s) 211, 247, 3301, 3388
FokI GGATG 5 cut(s) 47, 2829, 3463, 3476, 3548
Fsp4HI GCNGC 4 cut(s) 211, 247, 3301, 3388
FspBI CTAG 9 cut(s) 1682, 1806, 1826, 1950, 1970, 2036, 2348, 2376, 2636
GluI GCNGC 4 cut(s) 211, 247, 3301, 3388
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 2 cut(s) 3287, 3689
HaeIII GGCC 6 cut(s) 323, 669, 861, 2664, 2842, 3303
HapII CCGG 3 cut(s) 743, 1026, 2894
HincII GTYRAC 2 cut(s) 1666, 2686
HindII GTYRAC 2 cut(s) 1666, 2686
HindIII AAGCTT 6 cut(s) 155, 368, 643, 692, 1427, 1742
HpaII CCGG 3 cut(s) 743, 1026, 2894
HphI GGTGA 7 cut(s) 968, 1015, 1763, 1831, 2408, 2897, 3115
Hpy166II GTNNAC 8 cut(s) 73, 1023, 1566, 1666, 2381, 2686, 3703, 3709
Hpy8I GTNNAC 8 cut(s) 73, 1023, 1566, 1666, 2381, 2686, 3703, 3709
HpyCH4III ACNGT 4 cut(s) 49, 2287, 2885, 3318
HpyCH4IV ACGT 3 cut(s) 3002, 3048, 3705
HpyF10VI GCNNNNNNNGC 2 cut(s) 339, 1426
HpySE526I ACGT 3 cut(s) 3002, 3048, 3705
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 6 cut(s) 114, 745, 1693, 1837, 2257, 3670
Lsp1109I GCAGC 3 cut(s) 222, 258, 3399
LweI GCATC 5 cut(s) 391, 978, 3052, 3246, 3454
MaeI CTAG 9 cut(s) 1682, 1806, 1826, 1950, 1970, 2036, 2348, 2376, 2636
MaeII ACGT 3 cut(s) 3002, 3048, 3705
MbiI CCGCTC 1 cut(s) 3300
MfeI CAATTG 1 cut(s) 2185
MflI RGATCY 7 cut(s) 828, 1363, 1975, 2212, 3277, 3349, 3378
MhlI GDGCHC 1 cut(s) 1422
MmeI TCCRAC 7 cut(s) 211, 316, 1761, 1905, 2049, 2817, 3168
MroXI GAANNNNTTC 2 cut(s) 343, 1429
MspCI CTTAAG 2 cut(s) 983, 2332
MspI CCGG 3 cut(s) 743, 1026, 2894
MspR9I CCNGG 5 cut(s) 414, 448, 1073, 2895, 2976
MunI CAATTG 1 cut(s) 2185
Mva1269I GAATGC 1 cut(s) 2454
MvaI CCWGG 4 cut(s) 414, 448, 1073, 2976
MwoI GCNNNNNNNGC 2 cut(s) 339, 1426
NciI CCSGG 1 cut(s) 2895
NlaIV GGNNCC 4 cut(s) 747, 889, 1480, 3447
NmeAIII GCCGAG 1 cut(s) 2690
NmuCI GTSAC 8 cut(s) 593, 677, 720, 956, 1819, 2072, 2396, 3588
NspI RCATGY 6 cut(s) 526, 1081, 1888, 3200, 3567, 3701
NspV TTCGAA 2 cut(s) 2202, 3423
PaeI GCATGC 1 cut(s) 526
PciI ACATGT 4 cut(s) 1077, 3196, 3563, 3697
PciSI GCTCTTC 1 cut(s) 349
PctI GAATGC 1 cut(s) 2454
PdmI GAANNNNTTC 2 cut(s) 343, 1429
PfeI GAWTC 8 cut(s) 137, 146, 566, 1600, 2167, 2462, 2942, 3109
PflMI CCANNNNNTGG 1 cut(s) 911
PkrI GCNGC 4 cut(s) 212, 248, 3302, 3389
Ppu21I YACGTR 2 cut(s) 3003, 3706
PpuMI RGGWCCY 1 cut(s) 3446
PscI ACATGT 4 cut(s) 1077, 3196, 3563, 3697
Psp5II RGGWCCY 1 cut(s) 3446
Psp6I CCWGG 4 cut(s) 412, 446, 1071, 2974
PspEI GGTNACC 1 cut(s) 956
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 4 cut(s) 412, 446, 1071, 2974
PspN4I GGNNCC 4 cut(s) 747, 889, 1480, 3447
PspPI GGNCC 9 cut(s) 668, 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
PspPPI RGGWCCY 1 cut(s) 3446
PstNI CAGNNNCTG 2 cut(s) 81, 3044
PsuI RGATCY 7 cut(s) 828, 1363, 1975, 2212, 3277, 3349, 3378
RsaI GTAC 1 cut(s) 178
RsaNI GTAC 1 cut(s) 177
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 4 cut(s) 211, 247, 3301, 3388
Sau96I GGNCC 9 cut(s) 668, 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
ScaI AGTACT 1 cut(s) 178
ScrFI CCNGG 5 cut(s) 414, 448, 1073, 2895, 2976
SduI GDGCHC 1 cut(s) 1422
SfaNI GCATC 5 cut(s) 391, 978, 3052, 3246, 3454
SfuI TTCGAA 2 cut(s) 2202, 3423
SinI GGWCC 8 cut(s) 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
SmlI CTYRAG 9 cut(s) 983, 1286, 1413, 1552, 2119, 2332, 2512, 2612, 2692
SmoI CTYRAG 9 cut(s) 983, 1286, 1413, 1552, 2119, 2332, 2512, 2612, 2692
SnaBI TACGTA 2 cut(s) 3003, 3706
SphI GCATGC 1 cut(s) 526
SsiI CCGC 3 cut(s) 66, 2788, 3300
SspI AATATT 1 cut(s) 3471
SspMI CTAG 9 cut(s) 1682, 1806, 1826, 1950, 1970, 2036, 2348, 2376, 2636
StyD4I CCNGG 5 cut(s) 412, 446, 1071, 2893, 2974
StyI CCWWGG 5 cut(s) 1509, 1815, 1959, 2235, 2956
TaaI ACNGT 4 cut(s) 49, 2287, 2885, 3318
TaiI ACGT 3 cut(s) 3005, 3051, 3708
TaqI TCGA 7 cut(s) 173, 922, 995, 1043, 1149, 2202, 3423
TatI WGTACW 1 cut(s) 176
TauI GCSGC 1 cut(s) 3303
TfiI GAWTC 8 cut(s) 137, 146, 566, 1600, 2167, 2462, 2942, 3109
TscAI CASTG 4 cut(s) 52, 627, 1124, 3232
TseFI GTSAC 8 cut(s) 593, 677, 720, 956, 1819, 2072, 2396, 3588
TseI GCWGC 3 cut(s) 210, 246, 3387
Tsp45I GTSAC 8 cut(s) 593, 677, 720, 956, 1819, 2072, 2396, 3588
TspGWI ACGGA 1 cut(s) 3171
TspRI CASTG 4 cut(s) 52, 627, 1124, 3232
Van91I CCANNNNNTGG 1 cut(s) 911
Vha464I CTTAAG 2 cut(s) 983, 2332
VpaK11BI GGWCC 8 cut(s) 1409, 1582, 1726, 1870, 2014, 2149, 2790, 3446
XbaI TCTAGA 5 cut(s) 1681, 1825, 1969, 2347, 2635
XceI RCATGY 6 cut(s) 526, 1081, 1888, 3200, 3567, 3701
XmiI GTMKAC 2 cut(s) 2380, 3702
XmnI GAANNNNTTC 2 cut(s) 343, 1429
XspI CTAG 9 cut(s) 1682, 1806, 1826, 1950, 1970, 2036, 2348, 2376, 2636
ZrmI AGTACT 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.