Rw3G019410

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000047
Physical Location & Seq
Forward (+)
22015706 .. 22036866
21161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019410.1

Sequence Viewer

Length: 3156 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACCACCACTCTTACTAACCTCACCCCTGCAGTTCACAGCAACTGTATTGAAGCCCAGCAACAATCATTGCTCCATTTCAAGAAAAGTCTTGAATTTGATTCTTCCGAATACTCCAAGCTTATCACATGGAATTCGAGTACCGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACCAATGGGCGTGTTGTCGAACTTGATCTCAGCAGCGAGTTTATCTTCTGCAGCATTGATAATTCAAGCAGTCTCTTCCAACTTCAACATCTTCAGAGCCTCAATTTGGCCCATAACCACTTCAATGAGTCTTCAATTCCATCTGCAATCGGAAAGCTTGCAAATTTGAGGTATTTGAATTTAAGTAGAGCTTATTTTTCTGGGCAAATTCCCATTGAGGTTGCACGCTTGACAAGGTTGAAGGTTCTTGATCTCTCTATGTATTACTCGAGTAGGGAGTTAAAACTTGAGAACCCGAATTTAGGCACTTTAATCCAGAACCTTACAGAGCTTACTGAGTTAAATCTTGGTGGTCTAAACCTATCAGCTGAGGGATCTCACTGGGGCCAAACCATATCATCTTCACTTCCAAAGCTGAGTCTGTTGACCTTGTCCGGTTGTCATCTTTCAGGCCCTATTCATGAATCATTGGTCAGGCTTCATTCTCTATCCATGTTAGTATTGGATGACAACTACATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGTTTGATTTCCTTGAGTCTCTCTGCCTGTAACTTGTACGAAGCATTTCCCAAAGAGATATTCCTGGTACCTACACTACAGTCTGTTGACCTATCAGCTAATTCAGAGCTTCGTGGTTCCTTGCCGGAGTTTCCAAAGAATGGATCTCTCCAATCCCTAGTTCTATCCGGGACTAAGTTCTCAGGAGTCTTGCCGGATTCTATTGGCAACCTTAAAATGCTGTCTGAATTACATCTTAAAGATTGCAATTTCACAGGAGCAGTTCCAAAGTCACTGGCAAACCTAACACAATTGGGATATTTGGACTTGTCATACAACAAGTTTTCTAGTCCGATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGTGGATCTCGACTTGTCCGACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTCTCTATTCCCTTGCTGCGGAGCTTACTACTTTCTGGAAATCACTTCTCTGGTCAGTTGCTTGAATTTTCTAATGTCTCTTCGTCCTCGCTACTCTCTCTTGATTTGAGTAGCAACAATTTGGAAGGATCCATACCTGTGTCTATCCTTAATCTTCCAAAGCTTGATTTCTTTAATCTTTCTTCAAACAACTTGAGTGTAATTCTTGATCTCTCTTATAACTCTTTGAGTGGAACCATTCCCCAATGCTTGACCCAGACTTCTCTTTCTATCCTTGATCTGAGGAGCAACAACCTTACTGGATCTATCCCCGATACTTTTCTTAAAGGTTGTCATTTGGAAACTCTAGCTCTAGGCAGAAATCAGATACAAGGTCCATTTCCAAAATCTCTAGCCAATTGTTCAACCTTACAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCCTGTCCGTTGAAGACCATATCCACCTTGCGTGTCCTTGTGTTGCGATCCAACAAATTTTATGGACCTATTGGATCTCCACTACGTAATTCTACTTATCATCTGTCATCGCTTGATCTTCATTCAAACCAGCTTCAGGGACATATCCCCTTGTTCTTAAGTAGTATATATCTGGATTACTCCAGAAATAATTTCAGCTCCAGTATACGTCGTGACATTGGTGATTTCATTTCTACTGAGTCTTATCTTTCTCTTTCAAGAAATAACCTTCACGGGCCTATTCCAAAATCAATATGCAATGTAAGTGGTATGGTTCTTGATCTGTCCGATAATTCGTTGAGTGGAACCATTCCCCAATGCTTGACTCAATTACCTTCTCTTTCCGTCATTGATTTGAGAAGAAACAACCTAAGTGGCACAATTCCCAATAATTTTCTCAAAAGTTGTGAGCTACAAACTCTCAACCTCAGCAACAATCAGATACAAGGCCGGTTTCCAAAATCTCTTGTCAACTGCTCAAGACTAGAGGTTTTAAACATTGGAAAGAATAACATAATTGATACTTTTCCATGCTTACTAATGAGCATATCCACCTTGCGTGTCCTTGTTTTACAGTCCAACAAGTTTTATGGAAGCATTGGATGTCCTAAGACCAATGACACCTGGCCTATACTTCAAATAATAGATTTAGCTCACAACAATTTCAATGGTGATATGCCAGGAAGAATGTCTCAAGCATGGCAAGCTATGCTGTCTAATGATAATTCTCCAACTGACCTTGGATTTTTTTATCCTGCCCTCTCCTCCTATAGGAATTTCGACATCAAAGATGCTGACGTTTATTATAGAGATGTAATTACAACTATCATCAAAGGATTGGAGTTTCATCTTGTAAAGATTCCAACTATATTCACCTTGGTTGACTTCTCCTCCAACAATTTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCACTATATGTCCTCAACTTATCAGGTAATGCTTTCACAGGGAAAATCCCGTCATCATTTGGTAAGATGCGACAACTTGAGTCCTTAGATCTCTCAAAGAACCACTTGAGCGGCCAAATTCCCCCAGAGTTTTCAAATCTCACTTTCCTTGCGTTCTTGGATCTCTCAAATAATGAACTGGTCGGGAAGATCCCAACCAGCACTCAAATTTCAACATTTCCAAATACCTCATTCGAAGGTAACAAAGGATTATGGGGGCCTCCTTTGACAATGGATGCACTATTGCCACCACCAATTTCAAATGGAAGCTCAAGTCATCCGAATTTTGGAGATGAGATTGATTGGGATGTTATCTGTCTTGAAATTGGATTTACATGTGGGTTTGGAATTGCCATTAGGTCACTTTTGTTTTGCAAAAGATGGAGGAAATGGTATTACAAAACTATGTGTAGTATTCTATTCAAGATATTCCCTCAGTTGGAGCAGAGATTTGGTAATCATAGAAGACACGTGTTCGTAAACACAAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1051

Amino Acids

116.45

Weight (kDa)

6.48

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 9.9e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 159 2.6e-07 Leucine-rich repeat region
LRR_8 PF13855 305 - 364 2.6e-06 Leucine rich repeat
LRR_8 PF13855 330 - 389 1e-05 Leucine rich repeat
LRR_8 PF13855 485 - 544 5.1e-08 Leucine rich repeat
LRR_8 PF13855 698 - 757 7.2e-07 Leucine rich repeat
LRR_4 PF12799 698 - 738 2.7e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 864 - 931 2.8e-07 Leucine-rich repeat region
LRR_8 PF13855 875 - 934 1.3e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
Acc65I GGTACC 1 cut(s) 835
AccB1I GGYRCC 1 cut(s) 835
AccB7I CCANNNNNTGG 1 cut(s) 908
AccBSI CCGCTC 1 cut(s) 2733
AccI GTMKAC 1 cut(s) 1849
AciI CCGC 2 cut(s) 1210, 2733
AcoI YGGCCR 1 cut(s) 2734
AcuI CTGAAG 2 cut(s) 290, 1763
AcvI CACGTG 1 cut(s) 3133
AfaI GTAC 3 cut(s) 178, 806, 837
AfiI CCNNNNNNNGG 8 cut(s) 319, 515, 908, 1209, 1780, 2454, 2948, 3100
AflII CTTAAG 1 cut(s) 1801
AflIII ACRYGT 3 cut(s) 2996, 3130, 3132
AjnI CCWGG 3 cut(s) 831, 2306, 2362
AjuI GAANNNNNNNTTGG 4 cut(s) 812, 844, 912, 944
Alw26I GTCTC 5 cut(s) 290, 791, 1191, 1273, 2379
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 481
AoxI GGCC 8 cut(s) 321, 598, 664, 1919, 2131, 2309, 2734, 2879
ApeKI GCWGC 4 cut(s) 210, 246, 264, 1207
AseI ATTAAT 1 cut(s) 1104
Asp700I GAANNNNTTC 1 cut(s) 813
Asp718I GGTACC 1 cut(s) 835
AspS9I GGNCC 8 cut(s) 322, 598, 665, 737, 1565, 1709, 1919, 2879
AsuC2I CCSGG 1 cut(s) 937
AsuHPI GGTGA 5 cut(s) 31, 52, 1877, 2366, 2548
AsuII TTCGAA 1 cut(s) 2856
AvaI CYCGRG 1 cut(s) 481
AvaII GGWCC 3 cut(s) 737, 1565, 1709
AxyI CCTNAGG 1 cut(s) 2601
BamHI GGATCC 1 cut(s) 1319
BanI GGYRCC 1 cut(s) 835
BarI GAAGNNNNNNTAC 2 cut(s) 1308, 1340
BbrPI CACGTG 1 cut(s) 3133
BbsI GAAGAC 3 cut(s) 336, 1664, 3133
BbvCI CCTCAGC 2 cut(s) 582, 2111
BbvI GCAGC 4 cut(s) 222, 258, 276, 1194
BccI CCATC 2 cut(s) 361, 3036
BciT130I CCWGG 3 cut(s) 833, 2308, 2364
BcnI CCSGG 1 cut(s) 937
BcoDI GTCTC 5 cut(s) 290, 791, 1191, 1273, 2379
BfaI CTAG 6 cut(s) 926, 1095, 1538, 1544, 1583, 2168
BfmI CTRYAG 4 cut(s) 66, 262, 845, 2452
BfrI CTTAAG 1 cut(s) 1801
BglII AGATCT 1 cut(s) 2710
BisI GCNGC 5 cut(s) 211, 247, 265, 1208, 2734
BlsI GCNGC 5 cut(s) 212, 248, 266, 1209, 2735
Bme1390I CCNGG 4 cut(s) 833, 937, 2308, 2364
Bme18I GGWCC 3 cut(s) 737, 1565, 1709
BmeT110I CYCGRG 1 cut(s) 481
BmgT120I GGNCC 8 cut(s) 322, 598, 665, 737, 1565, 1709, 1919, 2879
BmiI GGNNCC 8 cut(s) 599, 744, 837, 886, 1321, 1426, 1990, 2880
BmrFI CCNGG 4 cut(s) 833, 937, 2308, 2364
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 4 cut(s) 1627, 2464, 2679, 2887
BmuI ACTGGG 1 cut(s) 604
BpiI GAAGAC 3 cut(s) 336, 1664, 3133
BpmI CTGGAG 2 cut(s) 1810, 1828
Bpu10I CCTNAGC 2 cut(s) 582, 2111
Bpu14I TTCGAA 1 cut(s) 2856
BpuEI CTTGAG 8 cut(s) 521, 802, 1405, 2146, 2361, 2720, 2749, 2917
BpuMI CCSGG 1 cut(s) 937
BsaAI YACGTR 2 cut(s) 1730, 3133
BsaJI CCNNGG 3 cut(s) 1615, 2422, 2559
BsaWI WCCGGW 2 cut(s) 647, 739
BsaXI ACNNNNNCTCC 2 cut(s) 2558, 2588
Bsc4I CCNNNNNNNGG 8 cut(s) 319, 515, 908, 1209, 1780, 2454, 2948, 3100
Bse118I RCCGGY 1 cut(s) 2133
Bse1I ACTGG 5 cut(s) 599, 1047, 1495, 1845, 2805
Bse21I CCTNAGG 1 cut(s) 2601
Bse3DI GCAATG 2 cut(s) 104, 1948
BseBI CCWGG 3 cut(s) 833, 2308, 2364
BseDI CCNNGG 3 cut(s) 1615, 2422, 2559
BseGI GGATG 5 cut(s) 724, 2291, 2902, 2938, 2974
BseLI CCNNNNNNNGG 8 cut(s) 319, 515, 908, 1209, 1780, 2454, 2948, 3100
BseMI GCAATG 2 cut(s) 104, 1948
BseNI ACTGG 5 cut(s) 599, 1047, 1495, 1845, 2805
BseRI GAGGAG 3 cut(s) 1489, 2437, 2563
BseXI GCAGC 4 cut(s) 222, 258, 276, 1194
BseYI CCCAGC 1 cut(s) 93
BshFI GGCC 8 cut(s) 323, 600, 666, 1921, 2133, 2311, 2736, 2881
BshNI GGYRCC 1 cut(s) 835
BsiHKCI CYCGRG 1 cut(s) 481
BsiSI CCGG 6 cut(s) 648, 740, 893, 936, 962, 2134
BslFI GGGAC 3 cut(s) 952, 1133, 1797
BslI CCNNNNNNNGG 8 cut(s) 319, 515, 908, 1209, 1780, 2454, 2948, 3100
BsmAI GTCTC 5 cut(s) 290, 791, 1191, 1273, 2379
BsmFI GGGAC 3 cut(s) 952, 1133, 1797
BsnI GGCC 8 cut(s) 323, 600, 666, 1921, 2133, 2311, 2736, 2881
BsoBI CYCGRG 1 cut(s) 481
Bsp119I TTCGAA 1 cut(s) 2856
BspACI CCGC 2 cut(s) 1210, 2733
BspANI GGCC 8 cut(s) 323, 600, 666, 1921, 2133, 2311, 2736, 2881
BspHI TCATGA 1 cut(s) 673
BspLI GGNNCC 8 cut(s) 599, 744, 837, 886, 1321, 1426, 1990, 2880
BspMAI CTGCAG 2 cut(s) 70, 266
BspT104I TTCGAA 1 cut(s) 2856
BspT107I GGYRCC 1 cut(s) 835
BspTI CTTAAG 1 cut(s) 1801
BsrBI CCGCTC 1 cut(s) 2733
BsrDI GCAATG 2 cut(s) 104, 1948
BsrFI RCCGGY 1 cut(s) 2133
BsrI ACTGG 5 cut(s) 599, 1047, 1495, 1845, 2805
BssAI RCCGGY 1 cut(s) 2133
BssECI CCNNGG 3 cut(s) 1615, 2422, 2559
BssNAI GTATAC 1 cut(s) 1850
BssT1I CCWWGG 3 cut(s) 1615, 2422, 2559
Bst1107I GTATAC 1 cut(s) 1850
Bst2UI CCWGG 3 cut(s) 833, 2308, 2364
Bst4CI ACNGT 3 cut(s) 83, 849, 2259
Bst6I CTCTTC 2 cut(s) 293, 1276
BstAFI CTTAAG 1 cut(s) 1801
BstAPI GCANNNNNTGC 1 cut(s) 2392
BstBAI YACGTR 2 cut(s) 1730, 3133
BstBI TTCGAA 1 cut(s) 2856
BstC8I GCNNGC 3 cut(s) 372, 439, 2388
BstENI CCTNNNNNAGG 1 cut(s) 2452
BstF5I GGATG 5 cut(s) 724, 2291, 2902, 2938, 2974
BstMAI GTCTC 5 cut(s) 290, 791, 1191, 1273, 2379
BstMWI GCNNNNNNNGC 2 cut(s) 2387, 2392
BstNI CCWGG 3 cut(s) 833, 2308, 2364
BstNSI RCATGY 1 cut(s) 3000
BstSCI CCNGG 4 cut(s) 831, 935, 2306, 2362
BstSFI CTRYAG 4 cut(s) 66, 262, 845, 2452
BstSNI TACGTA 1 cut(s) 1730
BstV1I GCAGC 4 cut(s) 222, 258, 276, 1194
BstV2I GAAGAC 3 cut(s) 336, 1664, 3133
BstX2I RGATCY 9 cut(s) 587, 911, 1141, 1319, 1493, 1718, 2710, 2782, 2811
BstYI RGATCY 9 cut(s) 587, 911, 1141, 1319, 1493, 1718, 2710, 2782, 2811
BstZ17I GTATAC 1 cut(s) 1850
Bsu36I CCTNAGG 1 cut(s) 2601
BsuRI GGCC 8 cut(s) 323, 600, 666, 1921, 2133, 2311, 2736, 2881
BtgZI GCGATG 1 cut(s) 1737
BtsCI GGATG 5 cut(s) 724, 2291, 2902, 2938, 2974
BtsIMutI CAGTG 2 cut(s) 592, 1040
Cac8I GCNNGC 3 cut(s) 372, 439, 2388
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 673
Cfr10I RCCGGY 1 cut(s) 2133
Cfr13I GGNCC 8 cut(s) 322, 598, 665, 737, 1565, 1709, 1919, 2879
Csp6I GTAC 3 cut(s) 177, 805, 836
CspCI CAANNNNNGTGG 4 cut(s) 1930, 1965, 2038, 2073
CviAII CATG 6 cut(s) 165, 674, 706, 2214, 2382, 2997
CviQI GTAC 3 cut(s) 177, 805, 836
DraI TTTAAA 1 cut(s) 2178
EaeI YGGCCR 1 cut(s) 2734
Eam1104I CTCTTC 2 cut(s) 293, 1276
EarI CTCTTC 2 cut(s) 293, 1276
Eco105I TACGTA 1 cut(s) 1730
Eco130I CCWWGG 3 cut(s) 1615, 2422, 2559
Eco47I GGWCC 3 cut(s) 737, 1565, 1709
Eco57I CTGAAG 2 cut(s) 290, 1763
Eco72I CACGTG 1 cut(s) 3133
Eco81I CCTNAGG 1 cut(s) 2601
Eco88I CYCGRG 1 cut(s) 481
EcoNI CCTNNNNNAGG 1 cut(s) 2452
EcoO109I RGGNCCY 2 cut(s) 665, 2879
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 3 cut(s) 831, 2306, 2362
EcoT14I CCWWGG 3 cut(s) 1615, 2422, 2559
ErhI CCWWGG 3 cut(s) 1615, 2422, 2559
FaeI CATG 6 cut(s) 168, 677, 709, 2217, 2385, 3000
FalI AAGNNNNNCTT 4 cut(s) 388, 420, 2711, 2743
FaqI GGGAC 3 cut(s) 952, 1133, 1797
FatI CATG 6 cut(s) 164, 673, 705, 2213, 2381, 2996
FblI GTMKAC 1 cut(s) 1849
Fnu4HI GCNGC 5 cut(s) 211, 247, 265, 1208, 2734
FokI GGATG 5 cut(s) 731, 2298, 2909, 2925, 2981
Fsp4HI GCNGC 5 cut(s) 211, 247, 265, 1208, 2734
FspBI CTAG 6 cut(s) 926, 1095, 1538, 1544, 1583, 2168
GluI GCNGC 5 cut(s) 211, 247, 265, 1208, 2734
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 2 cut(s) 1810, 1828
HaeIII GGCC 8 cut(s) 323, 600, 666, 1921, 2133, 2311, 2736, 2881
HapII CCGG 6 cut(s) 648, 740, 893, 936, 962, 2134
Hin1II CATG 6 cut(s) 168, 677, 709, 2217, 2385, 3000
HincII GTYRAC 4 cut(s) 639, 856, 2155, 2566
HindII GTYRAC 4 cut(s) 639, 856, 2155, 2566
HindIII AAGCTT 4 cut(s) 155, 368, 1133, 1352
HpaII CCGG 6 cut(s) 648, 740, 893, 936, 962, 2134
HphI GGTGA 5 cut(s) 31, 52, 1877, 2366, 2548
Hpy166II GTNNAC 7 cut(s) 73, 639, 856, 1850, 2155, 2566, 3142
Hpy8I GTNNAC 7 cut(s) 73, 639, 856, 1850, 2155, 2566, 3142
Hpy99I CGWCG 1 cut(s) 1857
HpyAV CCTTC 6 cut(s) 448, 1201, 1310, 1922, 2028, 2852
HpyCH4III ACNGT 3 cut(s) 83, 849, 2259
HpyCH4IV ACGT 4 cut(s) 1729, 1852, 2481, 3132
HpyF10VI GCNNNNNNNGC 2 cut(s) 2387, 2392
HpySE526I ACGT 4 cut(s) 1729, 1852, 2481, 3132
Hsp92II CATG 6 cut(s) 168, 677, 709, 2217, 2385, 3000
KpnI GGTACC 1 cut(s) 839
LmnI GCTCC 6 cut(s) 114, 1025, 1212, 1476, 1847, 3103
Lsp1109I GCAGC 4 cut(s) 222, 258, 276, 1194
LweI GCATC 4 cut(s) 1627, 2464, 2679, 2887
MaeI CTAG 6 cut(s) 926, 1095, 1538, 1544, 1583, 2168
MaeII ACGT 4 cut(s) 1729, 1852, 2481, 3132
MaeIII GTNAC 6 cut(s) 202, 797, 1038, 1856, 2861, 3021
MbiI CCGCTC 1 cut(s) 2733
MfeI CAATTG 2 cut(s) 1058, 1588
MflI RGATCY 9 cut(s) 587, 911, 1141, 1319, 1493, 1718, 2710, 2782, 2811
MlyI GAGTC 7 cut(s) 350, 640, 793, 963, 1892, 2002, 2711
MmeI TCCRAC 8 cut(s) 316, 1179, 1719, 2286, 2438, 2570, 2601, 3081
MroXI GAANNNNTTC 1 cut(s) 813
MslI CAYNNNNRTG 2 cut(s) 336, 1328
MspA1I CMGCKG 1 cut(s) 581
MspCI CTTAAG 1 cut(s) 1801
MspI CCGG 6 cut(s) 648, 740, 893, 936, 962, 2134
MspR9I CCNGG 4 cut(s) 833, 937, 2308, 2364
MunI CAATTG 2 cut(s) 1058, 1588
MvaI CCWGG 3 cut(s) 833, 2308, 2364
MwoI GCNNNNNNNGC 2 cut(s) 2387, 2392
NciI CCSGG 1 cut(s) 937
NlaIII CATG 6 cut(s) 168, 677, 709, 2217, 2385, 3000
NlaIV GGNNCC 8 cut(s) 599, 744, 837, 886, 1321, 1426, 1990, 2880
NmuCI GTSAC 3 cut(s) 1038, 1856, 3021
NspI RCATGY 1 cut(s) 3000
NspV TTCGAA 1 cut(s) 2856
PaeR7I CTCGAG 1 cut(s) 481
PagI TCATGA 1 cut(s) 673
PciI ACATGT 1 cut(s) 2996
PcsI WCGNNNNNNNCGW 1 cut(s) 1152
PdmI GAANNNNTTC 1 cut(s) 813
PfeI GAWTC 5 cut(s) 137, 677, 965, 1620, 2542
PflFI GACNNNGTC 1 cut(s) 643
PflMI CCANNNNNTGG 1 cut(s) 908
PfoI TCCNGGA 1 cut(s) 935
PkrI GCNGC 5 cut(s) 212, 248, 266, 1209, 2735
PleI GAGTC 7 cut(s) 349, 639, 792, 962, 1891, 2002, 2710
PmaCI CACGTG 1 cut(s) 3133
PmlI CACGTG 1 cut(s) 3133
PpsI GAGTC 7 cut(s) 349, 639, 792, 962, 1891, 2002, 2710
Ppu21I YACGTR 2 cut(s) 1730, 3133
PscI ACATGT 1 cut(s) 2996
PshBI ATTAAT 1 cut(s) 1104
PsiI TTATAA 1 cut(s) 1410
Psp6I CCWGG 3 cut(s) 831, 2306, 2362
PspCI CACGTG 1 cut(s) 3133
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 3 cut(s) 831, 2306, 2362
PspN4I GGNNCC 8 cut(s) 599, 744, 837, 886, 1321, 1426, 1990, 2880
PspPI GGNCC 8 cut(s) 322, 598, 665, 737, 1565, 1709, 1919, 2879
PspXI VCTCGAGB 1 cut(s) 481
PstI CTGCAG 2 cut(s) 70, 266
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 9 cut(s) 587, 911, 1141, 1319, 1493, 1718, 2710, 2782, 2811
PsyI GACNNNGTC 1 cut(s) 643
PvuII CAGCTG 1 cut(s) 581
RsaI GTAC 3 cut(s) 178, 806, 837
RsaNI GTAC 3 cut(s) 177, 805, 836
RseI CAYNNNNRTG 2 cut(s) 336, 1328
SatI GCNGC 5 cut(s) 211, 247, 265, 1208, 2734
Sau96I GGNCC 8 cut(s) 322, 598, 665, 737, 1565, 1709, 1919, 2879
SchI GAGTC 7 cut(s) 350, 640, 793, 963, 1892, 2002, 2711
ScrFI CCNGG 4 cut(s) 833, 937, 2308, 2364
SfaNI GCATC 4 cut(s) 1627, 2464, 2679, 2887
SfcI CTRYAG 4 cut(s) 66, 262, 845, 2452
Sfr274I CTCGAG 1 cut(s) 481
SfuI TTCGAA 1 cut(s) 2856
SinI GGWCC 3 cut(s) 737, 1565, 1709
SlaI CTCGAG 1 cut(s) 481
SmiMI CAYNNNNRTG 2 cut(s) 336, 1328
SnaBI TACGTA 1 cut(s) 1730
SsiI CCGC 2 cut(s) 1210, 2733
SspMI CTAG 6 cut(s) 926, 1095, 1538, 1544, 1583, 2168
StyD4I CCNGG 4 cut(s) 831, 935, 2306, 2362
StyI CCWWGG 3 cut(s) 1615, 2422, 2559
TaaI ACNGT 3 cut(s) 83, 849, 2259
TaiI ACGT 4 cut(s) 1732, 1855, 2484, 3135
TaqI TCGA 6 cut(s) 173, 231, 482, 1146, 2463, 2856
TauI GCSGC 1 cut(s) 2736
TfiI GAWTC 5 cut(s) 137, 677, 965, 1620, 2542
TscAI CASTG 2 cut(s) 599, 1047
TseFI GTSAC 3 cut(s) 1038, 1856, 3021
TseI GCWGC 4 cut(s) 210, 246, 264, 1207
Tsp45I GTSAC 3 cut(s) 1038, 1856, 3021
TspDTI ATGAA 7 cut(s) 662, 683, 690, 1754, 1861, 2519, 2811
TspGWI ACGGA 3 cut(s) 1641, 2017, 2604
TspRI CASTG 2 cut(s) 599, 1047
Tth111I GACNNNGTC 1 cut(s) 643
Van91I CCANNNNNTGG 1 cut(s) 908
Vha464I CTTAAG 1 cut(s) 1801
VpaK11BI GGWCC 3 cut(s) 737, 1565, 1709
VspI ATTAAT 1 cut(s) 1104
XagI CCTNNNNNAGG 1 cut(s) 2452
XceI RCATGY 1 cut(s) 3000
XcmI CCANNNNNNNNNTGG 1 cut(s) 712
XhoI CTCGAG 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 1849
XmnI GAANNNNTTC 1 cut(s) 813
XspI CTAG 6 cut(s) 926, 1095, 1538, 1544, 1583, 2168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.