Rw1G021390

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000047
Physical Location & Seq
Forward (+)
45638412 .. 45641633
3222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G021390.1

Sequence Viewer

Length: 3183 bp
ATGAAAACTTTGCTACATTTCTTCCCTCTCTTGATCACACTTTGGGTCAGTATCATTATTCCAGCAGTTCACAGCCAGTGTATTAAAGACCAACAACTATCATTGCTCCAATTCAAGAAAAGCCTTGTGATCGATCCTTATTTTGATCCTTCCAGCAAGCTTAATTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTCGGCGTCACTTGCAGCCGCAATGGGCGTGTTCTGGGTCTTGACATAAGCAGCCAAGGTATCTCAGCTGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCGGACAACCGACTTGGCAGTAACTCTCAATCAATTCCATCCGCAATCGGAAATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAACTATTATTCAGGGCATATTCCCATTGAAATTTCACGATTGGCGAGGTTGGCAGTTGTTGATTTTTCTTACAGTAATGCCATCTTAAAACTTGGAAGTCCAAATTTACACACGTTTGTTCAGAACTTCACAGAACTTAGAGAGTTATATCTTGATCTTGTCCAAATATCAGAACAGGGGAGGGAGTGGTGCCGAGCCATATCAGATTCCCTTCCTAACCTTAGGGTCTTGAGCATGTACTCTTGTGATCTCTCAGGCCCTTTTCTCGAGTCTCTTGCTAAGCTTCAGTCTCTATCCGTGATTACGTTTGACGGGAACAATATCTCTGGGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCTTGAGTCTCAGAGAGTGCGGGTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAAAGTATTGACCTTTCAGATAATGACCAACTCGATGGTTCCTTGCCAGAATTCCCGAGTAATGGATCTCTTCAGCACCTGCATCTAAGCTGGACAAATTTTTCAGGGTTATTACCAAATTCTATTGGCAATCTCAAAATGCTGTCCACCATAAGTATTGGATATTGCAATTTCACCGGACCGATCCCCAAGTCAATGACAAACTTTACACAGTTGGTTTCTTTGTGGATGGCTGGTAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATGTGGTCGGCATAGACCTTTCCTACAACGGTCTAACAGGTACTATTAATTCCACCCACTGGAGAAACCTTACTAAGCTATCCTTTCTCGATTTGAGTTCCAATAAGCTCGATGGGAATATCCCATCATCTCTGTTTTGTCTTCCCCTTTTGGATCGTCTAGATCTTTCTAACAATCAATTCTCTGGTCCATTCCCTGAAATTTCAAATGTGTCCTCCTACTTGCTGAATGGTCCTGATCTTGAACTTGATTTGAGTAGCAACAATCTCGAAGGGCCACTGCCTATGTCTATCTTTAGCTTGCGACGTCTTACCGCTCTAGATGTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATGGTCTACACCAGCTGAGAAATCTTTCTGTACTTGATCTTTCACACAATAACTTGTTTCTTACCCATGATTTTACTAATTTCTCATATTCCTCATTTTCTCGGCTCTTTGACTTGAGGTTGGTGTCAATGAAATTGAGAACATTTCCTAATTTCTTGAGAAATCAATCTAACTGGAGTAGTTTGGACCTTTCAGATAACCAGATAAATGGCAAGATACCCAACTGGATTTGGAGTCTTAGTGATCTTACGTACCTAAATCTTTCTTGCAACTCCCTAGATTCTCTAGAAGTTCCTTCAAACAATCTCAGTTACTTAGGGTACCTTGACCTCCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTCCCATCACTTTACCGTGTCTATTATCTAGATTTCTCGAGAAATTATTTCAGCTCTCCCATACCGAGTACCATTGGAGATATGCTTGTAAACACTGGATTCTTGTCGCTTTCAAGCAATAACCTCAATGCGATCATTCCAGAATCATTATGCAATTCACAAATTCTTCAGATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACGGTTCCCCGGTGCTTGACTACAATGAGCAAGCTTGAAGTACTCAATTTAAGGAGAAACAATCTTACAAATGTTAATGAATTCTCTCATAATTGCAGTTTAGCAACGCTAGACATCAGTGGAAATCAAATTCAAGGCCAGTTTTTAAAATCTCTTGTCCACTGCACCCAGTTAAAGGTTTTAAATCTTGGAAACAATCTTATAGCAGAACCATTTCCATGCTTTTTGAGGAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTCTATGGGCGCATTAGATGTCGCAAGACTAATGGCACTTGGCCAGCACTTCAAATCATAGACTTGGCTCACAACAATTTGAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCGATGAGGAGTAGCAAAGATAATGCCCCAAAGAATATCCATAGCATTGAATTGGGTAGCATTGAATTGGAATTGGCAGGGGAAACTTATTATCAAGAAGATACAATCCCAGTTACCAACAAAGGCTTAGAGTTCGAGTTGGTGAATGTTTTAACTATCTTCATCTCAATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCAGAGGAAATTGGAGAACTCAAATCATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTAAGTAACTTGAGTGAGCTAGAGTCTTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACTGGAGCTTACAAAACTCACTTTCCTTGAATTCTTGAATCTCTCATATAATCAATTGGTAGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGTAGATAATGGAACAGGGTTCTCTTCACCAAAGCTGGAAGGAAATCATTCAAATCCTGGGCATGAGATTAATTGGGACATTATCTGTCCTGAAATTGGATTTACATGTGGATGGAGGAAATGGTATTACAGAGCTATGTATAACATGCTTCTAAAGATATTTCCTCAGCTAGAACAAAGATTTGGTCATCACAGGAGACATGTTTATGCACATCAAAGATACTGGAAACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1060

Amino Acids

118.21

Weight (kDa)

6.34

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 72 7e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 69 - 288 7.6e-11 Leucine-rich repeat region
LRR_8 PF13855 234 - 292 5.9e-06 Leucine rich repeat
LRR_14 PF23598 381 - 623 2.3e-06 Leucine-rich repeat region
LRR_8 PF13855 653 - 708 1.8e-07 Leucine rich repeat
LRR_8 PF13855 674 - 730 1.4e-09 Leucine rich repeat
LRR_8 PF13855 894 - 953 9.1e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 936
AatII GACGTC 1 cut(s) 1438
Acc36I ACCTGC 1 cut(s) 936
Acc65I GGTACC 1 cut(s) 1809
AccB1I GGYRCC 2 cut(s) 600, 1809
AccB7I CCANNNNNTGG 1 cut(s) 1188
AccBSI CCGCTC 2 cut(s) 1445, 2790
AccI GTMKAC 1 cut(s) 1495
AciI CCGC 7 cut(s) 217, 326, 366, 801, 1443, 2790, 2877
AclI AACGTT 1 cut(s) 3178
AclWI GGATC 7 cut(s) 128, 140, 922, 1027, 1290, 2316, 2656
AcoI YGGCCR 1 cut(s) 2372
AcuI CTGAAG 3 cut(s) 680, 905, 2006
AcyI GRCGYC 2 cut(s) 204, 1435
AfaI GTAC 9 cut(s) 181, 650, 1171, 1521, 1742, 1811, 1924, 2100, 2424
AfiI CCNNNNNNNGG 7 cut(s) 322, 749, 911, 1188, 1490, 2233, 3044
AflIII ACRYGT 3 cut(s) 522, 3053, 3148
AjnI CCWGG 3 cut(s) 748, 2425, 3004
AjuI GAANNNNNNNTTGG 4 cut(s) 2696, 2728, 3114, 3146
Alw21I GWGCWC 1 cut(s) 2884
Alw26I GTCTC 5 cut(s) 293, 687, 705, 794, 3139
AlwI GGATC 7 cut(s) 128, 140, 922, 1027, 1290, 2316, 2656
AlwNI CAGNNNCTG 1 cut(s) 928
Ama87I CYCGRG 3 cut(s) 677, 904, 1891
AoxI GGCC 7 cut(s) 667, 740, 1122, 1403, 2194, 2372, 2936
ApeKI GCWGC 3 cut(s) 213, 249, 2903
ArsI GACNNNNNNTTYG 2 cut(s) 3118, 3150
AseI ATTAAT 2 cut(s) 1176, 3018
Asp700I GAANNNNTTC 3 cut(s) 1513, 2271, 2995
Asp718I GGTACC 1 cut(s) 1809
AspLEI GCGC 1 cut(s) 2343
AsuC2I CCSGG 1 cut(s) 2068
AsuHPI GGTGA 4 cut(s) 1015, 2429, 2605, 2967
AvaI CYCGRG 3 cut(s) 677, 904, 1891
AvaII GGWCC 5 cut(s) 1028, 1316, 1361, 1675, 2767
AxyI CCTNAGG 1 cut(s) 632
BalI TGGCCA 1 cut(s) 2374
BanI GGYRCC 2 cut(s) 600, 1809
BbsI GAAGAC 1 cut(s) 1262
Bbv12I GWGCWC 1 cut(s) 2884
BbvCI CCTCAGC 1 cut(s) 3114
BbvI GCAGC 3 cut(s) 225, 261, 2915
BcgI CGANNNNNNTGC 4 cut(s) 668, 702, 1378, 1412
BciT130I CCWGG 3 cut(s) 750, 2427, 3006
BciVI GTATCC 1 cut(s) 2862
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 1 cut(s) 2068
BcoDI GTCTC 5 cut(s) 293, 687, 705, 794, 3139
BfaI CTAG 8 cut(s) 1289, 1448, 1766, 1775, 1883, 2168, 2756, 3119
BfuAI ACCTGC 1 cut(s) 936
BfuI GTATCC 1 cut(s) 2862
BglII AGATCT 2 cut(s) 828, 1291
BisI GCNGC 4 cut(s) 214, 217, 250, 2904
BlpI GCTNAGC 1 cut(s) 690
BlsI GCNGC 4 cut(s) 215, 218, 251, 2905
BmcAI AGTACT 2 cut(s) 181, 2100
Bme1390I CCNGG 4 cut(s) 750, 2068, 2427, 3006
Bme18I GGWCC 5 cut(s) 1028, 1316, 1361, 1675, 2767
BmeT110I CYCGRG 3 cut(s) 677, 904, 1891
BmiI GGNNCC 6 cut(s) 602, 889, 1123, 1811, 2064, 2937
BmrFI CCNGG 4 cut(s) 750, 2068, 2427, 3006
BmrI ACTGGG 2 cut(s) 2221, 2555
BmsI GCATC 2 cut(s) 940, 2890
BmuI ACTGGG 2 cut(s) 2221, 2555
BpiI GAAGAC 1 cut(s) 1262
BpmI CTGGAG 3 cut(s) 1210, 1684, 2825
Bpu10I CCTNAGC 1 cut(s) 3114
Bpu1102I GCTNAGC 1 cut(s) 690
BpuEI CTTGAG 6 cut(s) 409, 661, 805, 1624, 1666, 2767
BpuMI CCSGG 1 cut(s) 2068
Bsa29I ATCGAT 1 cut(s) 132
BsaAI YACGTR 1 cut(s) 1740
BsaHI GRCGYC 2 cut(s) 204, 1435
BsaJI CCNNGG 4 cut(s) 253, 2066, 2914, 3005
BsaWI WCCGGW 1 cut(s) 1025
BsaXI ACNNNNNCTCC 2 cut(s) 1714, 1744
Bsc4I CCNNNNNNNGG 7 cut(s) 322, 749, 911, 1188, 1490, 2233, 3044
Bse21I CCTNAGG 1 cut(s) 632
Bse3DI GCAATG 2 cut(s) 101, 226
BseBI CCWGG 3 cut(s) 750, 2427, 3006
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 4 cut(s) 253, 2066, 2914, 3005
BseGI GGATG 4 cut(s) 362, 1083, 2294, 3065
BseLI CCNNNNNNNGG 7 cut(s) 322, 749, 911, 1188, 1490, 2233, 3044
BseMI GCAATG 2 cut(s) 101, 226
BseMII CTCAG 7 cut(s) 276, 678, 805, 1496, 1810, 2777, 3128
BseRI GAGGAG 1 cut(s) 2473
BseXI GCAGC 3 cut(s) 225, 261, 2915
BsgI GTGCAG 2 cut(s) 2206, 2742
BshFI GGCC 7 cut(s) 669, 742, 1124, 1405, 2196, 2374, 2938
BshNI GGYRCC 2 cut(s) 600, 1809
BshVI ATCGAT 1 cut(s) 132
BsiHKAI GWGCWC 1 cut(s) 2884
BsiHKCI CYCGRG 3 cut(s) 677, 904, 1891
BsiSI CCGG 2 cut(s) 1026, 2068
BslFI GGGAC 1 cut(s) 3038
BslI CCNNNNNNNGG 7 cut(s) 322, 749, 911, 1188, 1490, 2233, 3044
BsmAI GTCTC 5 cut(s) 293, 687, 705, 794, 3139
BsmFI GGGAC 1 cut(s) 3038
BsmI GAATGC 1 cut(s) 178
BsnI GGCC 7 cut(s) 669, 742, 1124, 1405, 2196, 2374, 2938
BsoBI CYCGRG 3 cut(s) 677, 904, 1891
Bsp1286I GDGCHC 1 cut(s) 2884
Bsp1720I GCTNAGC 1 cut(s) 690
BspACI CCGC 7 cut(s) 217, 326, 366, 801, 1443, 2790, 2877
BspANI GGCC 7 cut(s) 669, 742, 1124, 1405, 2196, 2374, 2938
BspCNI CTCAG 7 cut(s) 275, 677, 804, 1497, 1809, 2778, 3127
BspDI ATCGAT 1 cut(s) 132
BspLI GGNNCC 6 cut(s) 602, 889, 1123, 1811, 2064, 2937
BspMI ACCTGC 1 cut(s) 936
BspPI GGATC 7 cut(s) 128, 140, 922, 1027, 1290, 2316, 2656
BspT107I GGYRCC 2 cut(s) 600, 1809
BsrBI CCGCTC 2 cut(s) 1445, 2790
BsrDI GCAATG 2 cut(s) 101, 226
BssECI CCNNGG 4 cut(s) 253, 2066, 2914, 3005
BssNI GRCGYC 2 cut(s) 204, 1435
BssT1I CCWWGG 2 cut(s) 253, 2914
Bst2UI CCWGG 3 cut(s) 750, 2427, 3006
Bst4CI ACNGT 7 cut(s) 485, 781, 1062, 1160, 1871, 2062, 2950
Bst6I CTCTTC 3 cut(s) 296, 924, 2977
BstACI GRCGYC 2 cut(s) 204, 1435
BstBAI YACGTR 1 cut(s) 1740
BstC8I GCNNGC 5 cut(s) 158, 1430, 2090, 2376, 2451
BstF5I GGATG 4 cut(s) 362, 1083, 2294, 3065
BstHHI GCGC 1 cut(s) 2343
BstMAI GTCTC 5 cut(s) 293, 687, 705, 794, 3139
BstMWI GCNNNNNNNGC 2 cut(s) 210, 461
BstNI CCWGG 3 cut(s) 750, 2427, 3006
BstNSI RCATGY 4 cut(s) 649, 3057, 3097, 3152
BstSCI CCNGG 4 cut(s) 748, 2066, 2425, 3004
BstSNI TACGTA 1 cut(s) 1740
BstV1I GCAGC 3 cut(s) 225, 261, 2915
BstV2I GAAGAC 1 cut(s) 1262
BstX2I RGATCY 3 cut(s) 828, 914, 1291
BstXI CCANNNNNNTGG 4 cut(s) 884, 1132, 1697, 1838
BstYI RGATCY 3 cut(s) 828, 914, 1291
Bsu15I ATCGAT 1 cut(s) 132
Bsu36I CCTNAGG 1 cut(s) 632
BsuI GTATCC 1 cut(s) 2862
BsuRI GGCC 7 cut(s) 669, 742, 1124, 1405, 2196, 2374, 2938
BsuTUI ATCGAT 1 cut(s) 132
BtgZI GCGATG 1 cut(s) 2468
BtsCI GGATG 4 cut(s) 362, 1083, 2294, 3065
BtsI GCAGTG 2 cut(s) 1406, 2218
BtsIMutI CAGTG 8 cut(s) 83, 1123, 1186, 1406, 1947, 2182, 2218, 2801
BveI ACCTGC 1 cut(s) 936
Cac8I GCNNGC 5 cut(s) 158, 1430, 2090, 2376, 2451
CaiI CAGNNNCTG 1 cut(s) 928
CfoI GCGC 1 cut(s) 2343
ClaI ATCGAT 1 cut(s) 132
CpoI CGGWCCG 1 cut(s) 1028
CseI GACGC 1 cut(s) 193
Csp6I GTAC 9 cut(s) 180, 649, 1170, 1520, 1741, 1810, 1923, 2099, 2423
CspCI CAANNNNNGTGG 2 cut(s) 2395, 2430
CspI CGGWCCG 1 cut(s) 1028
CviQI GTAC 9 cut(s) 180, 649, 1170, 1520, 1741, 1810, 1923, 2099, 2423
DraI TTTAAA 2 cut(s) 2205, 2241
EaeI YGGCCR 1 cut(s) 2372
Eam1104I CTCTTC 3 cut(s) 296, 924, 2977
EarI CTCTTC 3 cut(s) 296, 924, 2977
EciI GGCGGA 1 cut(s) 341
Eco105I TACGTA 1 cut(s) 1740
Eco130I CCWWGG 2 cut(s) 253, 2914
Eco47I GGWCC 5 cut(s) 1028, 1316, 1361, 1675, 2767
Eco57I CTGAAG 3 cut(s) 680, 905, 2006
Eco81I CCTNAGG 1 cut(s) 632
Eco88I CYCGRG 3 cut(s) 677, 904, 1891
EcoO109I RGGNCCY 2 cut(s) 668, 2936
EcoRI GAATTC 3 cut(s) 899, 2138, 2831
EcoRII CCWGG 3 cut(s) 748, 2425, 3004
EcoT14I CCWWGG 2 cut(s) 253, 2914
ErhI CCWWGG 2 cut(s) 253, 2914
FalI AAGNNNNNCTT 2 cut(s) 1196, 1228
FaqI GGGAC 1 cut(s) 3038
FauI CCCGC 1 cut(s) 794
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 1 cut(s) 1495
Fnu4HI GCNGC 4 cut(s) 214, 217, 250, 2904
FokI GGATG 4 cut(s) 349, 1090, 2281, 3072
Fsp4HI GCNGC 4 cut(s) 214, 217, 250, 2904
FspBI CTAG 8 cut(s) 1289, 1448, 1766, 1775, 1883, 2168, 2756, 3119
GlaI GCGC 1 cut(s) 2342
GluI GCNGC 4 cut(s) 214, 217, 250, 2904
GsuI CTGGAG 3 cut(s) 1210, 1684, 2825
HaeIII GGCC 7 cut(s) 669, 742, 1124, 1405, 2196, 2374, 2938
HapII CCGG 2 cut(s) 1026, 2068
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 2343
Hin1I GRCGYC 2 cut(s) 204, 1435
Hin6I GCGC 1 cut(s) 2341
HinP1I GCGC 1 cut(s) 2341
HindIII AAGCTT 3 cut(s) 158, 692, 2090
HpaII CCGG 2 cut(s) 1026, 2068
HphI GGTGA 4 cut(s) 1015, 2429, 2605, 2967
Hpy166II GTNNAC 5 cut(s) 70, 996, 1496, 1945, 2218
Hpy188I TCNGA 9 cut(s) 374, 399, 534, 583, 616, 794, 868, 1684, 2025
Hpy8I GTNNAC 5 cut(s) 70, 996, 1496, 1945, 2218
Hpy99I CGWCG 1 cut(s) 1437
HpyAV CCTTC 8 cut(s) 159, 632, 852, 1091, 1394, 1794, 2920, 2981
HpyCH4III ACNGT 7 cut(s) 485, 781, 1062, 1160, 1871, 2062, 2950
HpyCH4IV ACGT 5 cut(s) 524, 716, 1435, 1739, 3178
HpyF10VI GCNNNNNNNGC 2 cut(s) 210, 461
HpySE526I ACGT 5 cut(s) 524, 716, 1435, 1739, 3178
Hsp92I GRCGYC 2 cut(s) 204, 1435
HspAI GCGC 1 cut(s) 2341
KpnI GGTACC 1 cut(s) 1813
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 2 cut(s) 111, 2806
Lsp1109I GCAGC 3 cut(s) 225, 261, 2915
LweI GCATC 2 cut(s) 940, 2890
MaeI CTAG 8 cut(s) 1289, 1448, 1766, 1775, 1883, 2168, 2756, 3119
MaeII ACGT 5 cut(s) 524, 716, 1435, 1739, 3178
MaeIII GTNAC 8 cut(s) 205, 344, 837, 1085, 1799, 2563, 2741, 2918
MbiI CCGCTC 2 cut(s) 1445, 2790
MfeI CAATTG 2 cut(s) 2619, 2855
MflI RGATCY 3 cut(s) 828, 914, 1291
MhlI GDGCHC 1 cut(s) 2884
MlsI TGGCCA 1 cut(s) 2374
MluNI TGGCCA 1 cut(s) 2374
MlyI GAGTC 4 cut(s) 689, 796, 1732, 2768
MmeI TCCRAC 3 cut(s) 1074, 1851, 2727
Mox20I TGGCCA 1 cut(s) 2374
MroXI GAANNNNTTC 3 cut(s) 1513, 2271, 2995
MscI TGGCCA 1 cut(s) 2374
MslI CAYNNNNRTG 3 cut(s) 2275, 3058, 3153
Msp20I TGGCCA 1 cut(s) 2374
MspA1I CMGCKG 2 cut(s) 266, 1504
MspI CCGG 2 cut(s) 1026, 2068
MspR9I CCNGG 4 cut(s) 750, 2068, 2427, 3006
MunI CAATTG 2 cut(s) 2619, 2855
Mva1269I GAATGC 1 cut(s) 178
MvaI CCWGG 3 cut(s) 750, 2427, 3006
MwoI GCNNNNNNNGC 2 cut(s) 210, 461
NciI CCSGG 1 cut(s) 2068
NlaIV GGNNCC 6 cut(s) 602, 889, 1123, 1811, 2064, 2937
NmeAIII GCCGAG 2 cut(s) 629, 1570
NmuCI GTSAC 1 cut(s) 205
NspI RCATGY 4 cut(s) 649, 3057, 3097, 3152
PaeR7I CTCGAG 2 cut(s) 677, 1891
PaqCI CACCTGC 1 cut(s) 936
PciI ACATGT 2 cut(s) 3053, 3148
PctI GAATGC 1 cut(s) 178
PdmI GAANNNNTTC 3 cut(s) 1513, 2271, 2995
PfeI GAWTC 7 cut(s) 617, 753, 1769, 1953, 1997, 2026, 2839
PflMI CCANNNNNTGG 1 cut(s) 1188
PfoI TCCNGGA 1 cut(s) 748
PkrI GCNGC 4 cut(s) 215, 218, 251, 2905
PleI GAGTC 4 cut(s) 688, 795, 1731, 2767
PpsI GAGTC 4 cut(s) 688, 795, 1731, 2767
Ppu21I YACGTR 1 cut(s) 1740
PscI ACATGT 2 cut(s) 3053, 3148
PshBI ATTAAT 2 cut(s) 1176, 3018
Psp1406I AACGTT 1 cut(s) 3178
Psp6I CCWGG 3 cut(s) 748, 2425, 3004
PspGI CCWGG 3 cut(s) 748, 2425, 3004
PspN4I GGNNCC 6 cut(s) 602, 889, 1123, 1811, 2064, 2937
PstNI CAGNNNCTG 1 cut(s) 928
PsuI RGATCY 3 cut(s) 828, 914, 1291
PvuII CAGCTG 2 cut(s) 266, 1504
RsaI GTAC 9 cut(s) 181, 650, 1171, 1521, 1742, 1811, 1924, 2100, 2424
RsaNI GTAC 9 cut(s) 180, 649, 1170, 1520, 1741, 1810, 1923, 2099, 2423
RseI CAYNNNNRTG 3 cut(s) 2275, 3058, 3153
Rsr2I CGGWCCG 1 cut(s) 1028
RsrII CGGWCCG 1 cut(s) 1028
SatI GCNGC 4 cut(s) 214, 217, 250, 2904
ScaI AGTACT 2 cut(s) 181, 2100
SchI GAGTC 4 cut(s) 689, 796, 1732, 2768
ScrFI CCNGG 4 cut(s) 750, 2068, 2427, 3006
SduI GDGCHC 1 cut(s) 2884
SfaNI GCATC 2 cut(s) 940, 2890
Sfr274I CTCGAG 2 cut(s) 677, 1891
SinI GGWCC 5 cut(s) 1028, 1316, 1361, 1675, 2767
SlaI CTCGAG 2 cut(s) 677, 1891
SmiMI CAYNNNNRTG 3 cut(s) 2275, 3058, 3153
SmlI CTYRAG 8 cut(s) 388, 640, 677, 784, 1603, 1645, 1891, 2746
SmoI CTYRAG 8 cut(s) 388, 640, 677, 784, 1603, 1645, 1891, 2746
SnaBI TACGTA 1 cut(s) 1740
SsiI CCGC 7 cut(s) 217, 326, 366, 801, 1443, 2790, 2877
SspMI CTAG 8 cut(s) 1289, 1448, 1766, 1775, 1883, 2168, 2756, 3119
StyD4I CCNGG 4 cut(s) 748, 2066, 2425, 3004
StyI CCWWGG 2 cut(s) 253, 2914
TaaI ACNGT 7 cut(s) 485, 781, 1062, 1160, 1871, 2062, 2950
TaiI ACGT 5 cut(s) 527, 719, 1438, 1742, 3181
TaqI TCGA 9 cut(s) 132, 678, 882, 1218, 1239, 1398, 1892, 2586, 2774
TaqII GACCGA 1 cut(s) 1045
TatI WGTACW 4 cut(s) 179, 648, 1519, 2098
TauI GCSGC 1 cut(s) 219
TfiI GAWTC 7 cut(s) 617, 753, 1769, 1953, 1997, 2026, 2839
TscAI CASTG 8 cut(s) 83, 1123, 1193, 1413, 1954, 2182, 2225, 2808
TseFI GTSAC 1 cut(s) 205
TseI GCWGC 3 cut(s) 213, 249, 2903
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 6 cut(s) 17, 290, 1634, 1826, 2151, 2602
TspGWI ACGGA 3 cut(s) 697, 1098, 2661
TspRI CASTG 8 cut(s) 83, 1123, 1193, 1413, 1954, 2182, 2225, 2808
Van91I CCANNNNNTGG 1 cut(s) 1188
VpaK11BI GGWCC 5 cut(s) 1028, 1316, 1361, 1675, 2767
VspI ATTAAT 2 cut(s) 1176, 3018
XbaI TCTAGA 4 cut(s) 1288, 1447, 1774, 1882
XceI RCATGY 4 cut(s) 649, 3057, 3097, 3152
XhoI CTCGAG 2 cut(s) 677, 1891
XmiI GTMKAC 1 cut(s) 1495
XmnI GAANNNNTTC 3 cut(s) 1513, 2271, 2995
XspI CTAG 8 cut(s) 1289, 1448, 1766, 1775, 1883, 2168, 2756, 3119
ZraI GACGTC 1 cut(s) 1436
ZrmI AGTACT 2 cut(s) 181, 2100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.