MD12G1175000.v1.1

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000047
Physical Location & Seq
Reverse (-)
25566827 .. 25570042
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1175000.v1.1.491

Sequence Viewer

Length: 3216 bp
ATGAAAACTTTGCTCCCTTTCTTTTTAGTTTTAATGACTGTTAAGTTGATCCACCTCTGTGTTAATGTCATCCCAGTTCACAGCCAATGTCTTCAAGATGAGAAACTTGCATTGCTCCATTTCAAACAAAGCCTTGTATTTGATCCTTCCATTTCCTCTAAGCTCGTATCGTGGAATTCAAGCATTGACTGCTGTTCTTGGGCTGGTCTTAGTTGCAGTGATGGACGTGTCGTTGGTCTTGACATCAGTGGTGAATGTATTTCAGGCAACATTGGCAATTCAAGCAGCCTCTTTGATCTTCAACATCTTCAAAGCCTCAATTTGGCCGACAATGAAGTTGGTTATGGCTCTCAAATTCCATCTGCAATTGGAAAGCTTACCAATTTGAGCTATCTAAACTTGTCTAATACTGCTTATTCCGGGCAAATTCCCATTGAGATTTCACATTTGACAAAGTTGGAAATTCTTGACTTATCTACCTTTTACTTTCCAGGAAATCCTTCACTGAATCTTGAGAATCCGAATTTGAATGTGCTCATTCGGAAGTTTTCTGAGCTTGTTGAACTTCATCTAGATGGCGTAAGGATATCAGAACAGGGGAGCAATTGGTGCCAAGCGATATCGTCTTCACTCCCAAACTTGAGAGTGTTGAGCTTATCAGCTTGTAATCTTTCAGGCCCTATTGATAGTTCATTACTGAAGCTTCAATCACTCTCAGTTGTTCGGATAGAGAACAATAATCTGTCTACTCAAGTTCCGGAATTCTTCTCAAAGTTCAAAAATTTGACTTCCTTGCTCCTCATGAATTCTGGATTATATGGTACATTTCCGGTGAAGATCTTCCTCGTACCTACACTACAGAGTATTGACTTATCTGGTAATCCGCAGCTTCAAGGATCCTTACCAGAATTTCCGAAGAGTGGATCTTTTCAATCCCTGGTTCTCAATGGGGCAAATTTTTCGGGCCAGTTCCTTCCAAACTCTATTGGCAACCTCAAACTGCTGTCCAACGTAGATGTTTCAACTTGCAATTTCATTGGGTCAATCCCGAGATCAATGGAAGACCTTACACAGTTGGTTTATTTGGACTTGTCGAGAAACCAGTTCAACGGTTCAATTCCATCCTTCAGTATGGCAAAGCATCTGACCATAATAAATCTTTCTTACAATCAGCTAACAGGTCAGATTAATTCCTCTCACTGGGAAAACCTTACTAATCTGGTGAACCTCGATTTGCGACACAATCTACTCGATGGGACTATTCCACCTTCTGTGTTTTCGCTTCCCTTGCTGCAAAAGTTACAGCTTTCCAACAATCACTTCTCTGGTCAGTTGCCTGAATTTGGAAATATTTGTACCCTATACAACCTTGAATTGAGCAGCAACAGTTTGGAAGGTCCTCTACCTGTGTCCATCTTTAATCTACGAGAGCTTAGAATACTCTCACTTTCTTCAAACAACTTCACTGGCTCTTTCCTTCTGAATAATATTCAGCAGCTGAAAAATCTCTCAAGTCTTGATCTTTCATGCAATAGCTTGTCTATTAATTACAATCACACCAATTCCTCTCATTCTTCATTTCCGAAAATTACCACATTGAAGTTAGCTTCTGGCAATTTGAGAAGAATCCCAGGTTTTTTGAGAAATCAATCAACATTAAGCACTTTGGACCTATCAGAAAACCAGATTCATGGTGAGATACCCAACTGGATTTGGAGAATCAGTAATCTTGTTCAACTAAATCTTTCTTGCAACTCTCTGGTAACTCTACAAGGTCCTTTCCTCAATCTTACTTCTACTTTGTCTCTGCTTGACCTTCATTCCAACCAGCTTCAGGGACAAATCCCAATGCTTCCACAATTGGCCACTTATCTGGATTACTCAAGAAATAATTTCAGCTCAAGCATTCCGGCTGACATTGGTGATTTCCTTACGTACACTATGTTCTTCTCTTTTTCAAGCAACAAGTTAAATGGAAGCATTCCAGAATCAATGTGCAACAAACCATATCTTCAGGTTCTTGATTTGTCCAATAATTCTCTAAGTGGCCCGATTCCCCAGTGCTTGACTGCGATGAGCCAGACACTGGCAGTACTTAATTTAAGGGGAAACAAACTTTCTGGCACTCTTCCAGATAATTTTCCTCAGCCCTGCAGTCTACAAACTCTAGACCTCAATGGCAATGTGATTGGTGGTCAGTTCCCAAAATCTCTAGCCAATTGCACAATGTTAGAGGTGTTAAACCTGGGAAACAATCAGATAACAGATGTCTTTCCGTGCTTACTGAAGAGCATATCCAGCTTGCGTGTACTTGTCTTGCGCTGCAACAAACTTTATGATCGCATTGAATGCCTCAAAACCAACAGTGCCTGGACAAAGCTTCAAATTATTGACATAGCTCGCAATAATTTTATTGGCGAAATACCAGGAAGTTTTTTGAAAACATGGCAAGCAATGATGGCTGACGAAGACGGTGCCATGTCAAAGATTAATCACCTCCGATTTCAAGTTCTTGAGTTCGAGCAGGTGTACTATCAGGATGCTATAACAGTTACCAGTAAAGGTCTGCAAATGGAGTTGGTAAAGATTCTAACTGTTTTCACCTTGATTGACATCTCATGCAACAAGTTTAGTGGATCAATACCTGAGGATATGGGAGAGCTGAAATCCCTCTATGGCCTCAACTTGTCCAGTAATGCTCTCACCGGCTCAATCCCATCGTTATTAGGCAACCTACGACAACTTGAATCGTTAGACCTTTCGAACAACAGATTGAGCGGAACAATTCCATCAGAGTTTTCCAAACTTAATTTCCTCTCATTCCTGAATCTCTCGAACAATCGACTAGTCGGGAAGATTCCAACCGGCACTCAGATTCAGTCTTTTTCAGCAGATTCCTTCGTAGGCAATAAAGGATTATATGGGCCACCGTTATCGCTAGGTAACATAGATGACGGATCAGCAAGGTTGTCACCAACATTAGAAGGCAAAGATTCAAATTCTACGCACGGAATTGAATGGGATCTGATTGGTGCTGAAGTTGGATTTATTGTTGGCTTTGGAATTGCTACTGGATCACTTGCGTTTTGCAAGAGGTGGAGTAAATGGTATTACAAAACCATGTATAAAATCCTTGCTAAGATATTCCCTCAGCTGGAGGAAAGATTTGGCCCTCATCGAAGACATGTTCACATACACCAAGGCTGGACCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1072

Amino Acids

118.12

Weight (kDa)

6.58

Isoelectric Point (pI)

38.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 73 3.6e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 695 - 754 6.9e-07 Leucine rich repeat
LRR_4 PF12799 743 - 783 1e-05 Leucine Rich repeats (2 copies)
LRR_8 PF13855 890 - 949 3.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2515
Acc36I ACCTGC 1 cut(s) 2515
AccB1I GGYRCC 2 cut(s) 609, 2474
AccB7I CCANNNNNTGG 1 cut(s) 2086
AccBSI CCGCTC 1 cut(s) 2778
AccI GTMKAC 2 cut(s) 746, 2158
AccIII TCCGGA 1 cut(s) 757
AciI CCGC 2 cut(s) 884, 2778
AclWI GGATC 9 cut(s) 43, 137, 891, 904, 931, 2644, 2965, 3030, 3082
AcoI YGGCCR 2 cut(s) 324, 1863
AcuI CTGAAG 6 cut(s) 719, 1111, 1817, 1997, 2306, 3057
AfaI GTAC 7 cut(s) 823, 849, 1357, 1937, 2094, 2310, 2531
AfiI CCNNNNNNNGG 7 cut(s) 322, 920, 1200, 1343, 1834, 2086, 3154
AflIII ACRYGT 2 cut(s) 226, 3184
AhlI ACTAGT 1 cut(s) 2845
AjiI CACGTC 1 cut(s) 227
AjnI CCWGG 6 cut(s) 490, 936, 1630, 2244, 2369, 2425
AjuI GAANNNNNNNTTGG 4 cut(s) 1304, 1336, 2795, 2827
AleI CACNNNNGTG 1 cut(s) 57
Alw21I GWGCWC 1 cut(s) 537
Alw26I GTCTC 1 cut(s) 1809
AlwI GGATC 9 cut(s) 43, 137, 891, 904, 931, 2644, 2965, 3030, 3082
AlwNI CAGNNNCTG 3 cut(s) 1498, 2086, 2370
Ama87I CYCGRG 1 cut(s) 1048
Aor13HI TCCGGA 1 cut(s) 757
AoxI GGCC 8 cut(s) 324, 676, 964, 1863, 2047, 2677, 2924, 3169
ApeKI GCWGC 6 cut(s) 285, 886, 1291, 1380, 1495, 2322
AseI ATTAAT 3 cut(s) 1188, 1545, 2490
Asp700I GAANNNNTTC 2 cut(s) 499, 839
AspLEI GCGC 1 cut(s) 2322
AspS9I GGNCC 9 cut(s) 677, 964, 1397, 1669, 1775, 2048, 2924, 3170, 3207
AsuC2I CCSGG 1 cut(s) 421
AsuHPI GGTGA 9 cut(s) 263, 844, 1234, 1706, 1934, 2486, 2593, 2695, 2964
AsuII TTCGAA 1 cut(s) 2762
AvaI CYCGRG 1 cut(s) 1048
AvaII GGWCC 4 cut(s) 1397, 1669, 1775, 3207
AxyI CCTNAGG 1 cut(s) 2646
BalI TGGCCA 1 cut(s) 1865
BamHI GGATCC 1 cut(s) 896
BanI GGYRCC 2 cut(s) 609, 2474
BarI GAAGNNNNNNTAC 2 cut(s) 1386, 1418
BbsI GAAGAC 5 cut(s) 83, 618, 1068, 2475, 3187
Bbv12I GWGCWC 1 cut(s) 537
BbvCI CCTCAGC 2 cut(s) 2145, 3150
BbvI GCAGC 6 cut(s) 297, 898, 1278, 1392, 1507, 2309
BccI CCATC 9 cut(s) 215, 367, 569, 1129, 1247, 1421, 2452, 2725, 2797
BcgI CGANNNNNNTGC 4 cut(s) 942, 976, 2456, 2490
BciT130I CCWGG 6 cut(s) 492, 938, 1632, 2246, 2371, 2427
BcnI CCSGG 1 cut(s) 421
BcoDI GTCTC 1 cut(s) 1809
BcuI ACTAGT 1 cut(s) 2845
BfaI CTAG 5 cut(s) 572, 2168, 2213, 2846, 2939
BfmI CTRYAG 2 cut(s) 857, 2152
BfuAI ACCTGC 1 cut(s) 2515
BglII AGATCT 1 cut(s) 837
BisI GCNGC 6 cut(s) 286, 887, 1292, 1381, 1496, 2323
BlsI GCNGC 6 cut(s) 287, 888, 1293, 1382, 1497, 2324
BmcAI AGTACT 1 cut(s) 2094
Bme1390I CCNGG 7 cut(s) 421, 492, 938, 1632, 2246, 2371, 2427
Bme18I GGWCC 4 cut(s) 1397, 1669, 1775, 3207
BmeT110I CYCGRG 1 cut(s) 1048
BmgBI CACGTC 1 cut(s) 227
BmgT120I GGNCC 9 cut(s) 677, 964, 1397, 1669, 1775, 2048, 2924, 3170, 3207
BmiI GGNNCC 4 cut(s) 611, 898, 2476, 3209
BmrFI CCNGG 7 cut(s) 421, 492, 938, 1632, 2246, 2371, 2427
BmrI ACTGGG 3 cut(s) 68, 1210, 2053
BmsI GCATC 2 cut(s) 1150, 2530
BmuI ACTGGG 3 cut(s) 68, 1210, 2053
BpiI GAAGAC 5 cut(s) 83, 618, 1068, 2475, 3187
BpmI CTGGAG 1 cut(s) 3176
Bpu10I CCTNAGC 2 cut(s) 2145, 3150
Bpu14I TTCGAA 1 cut(s) 2762
BpuEI CTTGAG 7 cut(s) 533, 661, 735, 1495, 1867, 1885, 2534
BpuMI CCSGG 1 cut(s) 421
BsaAI YACGTR 1 cut(s) 1935
BsaBI GATNNNNATC 1 cut(s) 2612
BsaJI CCNNGG 4 cut(s) 936, 1630, 2245, 3199
BsaWI WCCGGW 2 cut(s) 757, 829
BsaXI ACNNNNNCTCC 2 cut(s) 1708, 1738
Bsc4I CCNNNNNNNGG 7 cut(s) 322, 920, 1200, 1343, 1834, 2086, 3154
Bse118I RCCGGY 2 cut(s) 2705, 2864
Bse21I CCTNAGG 1 cut(s) 2646
Bse3DI GCAATG 3 cut(s) 110, 2188, 2460
Bse8I GATNNNNATC 1 cut(s) 2612
BseAI TCCGGA 1 cut(s) 757
BseBI CCWGG 6 cut(s) 492, 938, 1632, 2246, 2371, 2427
BseDI CCNNGG 4 cut(s) 936, 1630, 2245, 3199
BseGI GGATG 3 cut(s) 69, 1121, 2545
BseJI GATNNNNATC 1 cut(s) 2612
BseLI CCNNNNNNNGG 7 cut(s) 322, 920, 1200, 1343, 1834, 2086, 3154
BseMI GCAATG 3 cut(s) 110, 2188, 2460
BseMII CTCAG 6 cut(s) 543, 729, 2159, 2637, 2885, 3164
BseRI GAGGAG 1 cut(s) 788
BseXI GCAGC 6 cut(s) 297, 898, 1278, 1392, 1507, 2309
BshFI GGCC 8 cut(s) 326, 678, 966, 1865, 2049, 2679, 2926, 3171
BshNI GGYRCC 2 cut(s) 609, 2474
BsiHKAI GWGCWC 1 cut(s) 537
BsiHKCI CYCGRG 1 cut(s) 1048
BsiSI CCGG 6 cut(s) 420, 758, 830, 1910, 2706, 2865
BslFI GGGAC 2 cut(s) 1270, 1851
BslI CCNNNNNNNGG 7 cut(s) 322, 920, 1200, 1343, 1834, 2086, 3154
BsmAI GTCTC 1 cut(s) 1809
BsmFI GGGAC 2 cut(s) 1270, 1851
BsmI GAATGC 3 cut(s) 1905, 1980, 2354
BsnI GGCC 8 cut(s) 326, 678, 966, 1865, 2049, 2679, 2926, 3171
BsoBI CYCGRG 1 cut(s) 1048
Bsp119I TTCGAA 1 cut(s) 2762
Bsp1286I GDGCHC 1 cut(s) 537
Bsp13I TCCGGA 1 cut(s) 757
BspACI CCGC 2 cut(s) 884, 2778
BspANI GGCC 8 cut(s) 326, 678, 966, 1865, 2049, 2679, 2926, 3171
BspCNI CTCAG 6 cut(s) 544, 728, 2158, 2638, 2884, 3163
BspEI TCCGGA 1 cut(s) 757
BspHI TCATGA 1 cut(s) 801
BspLI GGNNCC 4 cut(s) 611, 898, 2476, 3209
BspMAI CTGCAG 1 cut(s) 2156
BspMI ACCTGC 1 cut(s) 2515
BspPI GGATC 9 cut(s) 43, 137, 891, 904, 931, 2644, 2965, 3030, 3082
BspQI GCTCTTC 1 cut(s) 2282
BspT104I TTCGAA 1 cut(s) 2762
BspT107I GGYRCC 2 cut(s) 609, 2474
BsrBI CCGCTC 1 cut(s) 2778
BsrDI GCAATG 3 cut(s) 110, 2188, 2460
BsrFI RCCGGY 2 cut(s) 2705, 2864
BssAI RCCGGY 2 cut(s) 2705, 2864
BssECI CCNNGG 4 cut(s) 936, 1630, 2245, 3199
BssT1I CCWWGG 1 cut(s) 3199
Bst2UI CCWGG 6 cut(s) 492, 938, 1632, 2246, 2371, 2427
Bst4CI ACNGT 9 cut(s) 40, 1074, 1112, 1388, 2366, 2474, 2551, 2596, 2931
Bst6I CTCTTC 3 cut(s) 911, 2133, 2282
BstAPI GCANNNNNTGC 3 cut(s) 189, 609, 2349
BstBAI YACGTR 1 cut(s) 1935
BstBI TTCGAA 1 cut(s) 2762
BstC8I GCNNGC 3 cut(s) 2303, 2401, 2451
BstF5I GGATG 3 cut(s) 69, 1121, 2545
BstHHI GCGC 1 cut(s) 2322
BstMAI GTCTC 1 cut(s) 1809
BstMWI GCNNNNNNNGC 8 cut(s) 189, 273, 282, 609, 1288, 2298, 2349, 2459
BstNI CCWGG 6 cut(s) 492, 938, 1632, 2246, 2371, 2427
BstNSI RCATGY 1 cut(s) 3188
BstSCI CCNGG 7 cut(s) 419, 490, 936, 1630, 2244, 2369, 2425
BstSFI CTRYAG 2 cut(s) 857, 2152
BstSNI TACGTA 1 cut(s) 1935
BstV1I GCAGC 6 cut(s) 297, 898, 1278, 1392, 1507, 2309
BstV2I GAAGAC 5 cut(s) 83, 618, 1068, 2475, 3187
BstX2I RGATCY 4 cut(s) 837, 896, 923, 3022
BstXI CCANNNNNNTGG 2 cut(s) 1691, 1873
BstYI RGATCY 4 cut(s) 837, 896, 923, 3022
Bsu36I CCTNAGG 1 cut(s) 2646
BsuRI GGCC 8 cut(s) 326, 678, 966, 1865, 2049, 2679, 2926, 3171
BtgZI GCGATG 1 cut(s) 2087
BtrI CACGTC 1 cut(s) 227
BtsCI GGATG 3 cut(s) 69, 1121, 2545
BtsI GCAGTG 1 cut(s) 223
BtsIMutI CAGTG 8 cut(s) 223, 253, 503, 1198, 1464, 2066, 2084, 2371
BveI ACCTGC 1 cut(s) 2515
Cac8I GCNNGC 3 cut(s) 2303, 2401, 2451
CaiI CAGNNNCTG 3 cut(s) 1498, 2086, 2370
CciI TCATGA 1 cut(s) 801
CfoI GCGC 1 cut(s) 2322
Cfr10I RCCGGY 2 cut(s) 2705, 2864
Cfr13I GGNCC 9 cut(s) 677, 964, 1397, 1669, 1775, 2048, 2924, 3170, 3207
Csp6I GTAC 7 cut(s) 822, 848, 1356, 1936, 2093, 2309, 2530
CspCI CAANNNNNGTGG 2 cut(s) 2614, 2649
CviAII CATG 8 cut(s) 802, 1527, 1691, 2445, 2479, 2619, 3121, 3185
CviQI GTAC 7 cut(s) 822, 848, 1356, 1936, 2093, 2309, 2530
EaeI YGGCCR 2 cut(s) 324, 1863
Eam1104I CTCTTC 3 cut(s) 911, 2133, 2282
EarI CTCTTC 3 cut(s) 911, 2133, 2282
Eco105I TACGTA 1 cut(s) 1935
Eco130I CCWWGG 1 cut(s) 3199
Eco32I GATATC 2 cut(s) 588, 621
Eco47I GGWCC 4 cut(s) 1397, 1669, 1775, 3207
Eco57I CTGAAG 6 cut(s) 719, 1111, 1817, 1997, 2306, 3057
Eco81I CCTNAGG 1 cut(s) 2646
Eco88I CYCGRG 1 cut(s) 1048
EcoO109I RGGNCCY 3 cut(s) 677, 1397, 1775
EcoRI GAATTC 3 cut(s) 175, 761, 805
EcoRII CCWGG 6 cut(s) 490, 936, 1630, 2244, 2369, 2425
EcoRV GATATC 2 cut(s) 588, 621
EcoT14I CCWWGG 1 cut(s) 3199
ErhI CCWWGG 1 cut(s) 3199
FaeI CATG 8 cut(s) 805, 1530, 1694, 2448, 2482, 2622, 3124, 3188
FaqI GGGAC 2 cut(s) 1270, 1851
FatI CATG 8 cut(s) 801, 1526, 1690, 2444, 2478, 2618, 3120, 3184
FblI GTMKAC 2 cut(s) 746, 2158
Fnu4HI GCNGC 6 cut(s) 286, 887, 1292, 1381, 1496, 2323
FokI GGATG 3 cut(s) 56, 1108, 2552
Fsp4HI GCNGC 6 cut(s) 286, 887, 1292, 1381, 1496, 2323
FspBI CTAG 5 cut(s) 572, 2168, 2213, 2846, 2939
GlaI GCGC 1 cut(s) 2321
GluI GCNGC 6 cut(s) 286, 887, 1292, 1381, 1496, 2323
GsuI CTGGAG 1 cut(s) 3176
HaeIII GGCC 8 cut(s) 326, 678, 966, 1865, 2049, 2679, 2926, 3171
HapII CCGG 6 cut(s) 420, 758, 830, 1910, 2706, 2865
HhaI GCGC 1 cut(s) 2322
Hin1II CATG 8 cut(s) 805, 1530, 1694, 2448, 2482, 2622, 3124, 3188
Hin6I GCGC 1 cut(s) 2320
HinP1I GCGC 1 cut(s) 2320
HindIII AAGCTT 3 cut(s) 374, 701, 2378
HpaII CCGG 6 cut(s) 420, 758, 830, 1910, 2706, 2865
HphI GGTGA 9 cut(s) 263, 844, 1234, 1706, 1934, 2486, 2593, 2695, 2964
Hpy166II GTNNAC 8 cut(s) 79, 747, 1225, 1938, 2159, 2309, 2530, 3190
Hpy8I GTNNAC 8 cut(s) 79, 747, 1225, 1938, 2159, 2309, 2530, 3190
HpyCH4III ACNGT 9 cut(s) 40, 1074, 1112, 1388, 2366, 2474, 2551, 2596, 2931
HpyCH4IV ACGT 3 cut(s) 226, 1011, 1934
HpyF10VI GCNNNNNNNGC 8 cut(s) 189, 273, 282, 609, 1288, 2298, 2349, 2459
HpySE526I ACGT 3 cut(s) 226, 1011, 1934
Hsp92II CATG 8 cut(s) 805, 1530, 1694, 2448, 2482, 2622, 3124, 3188
HspAI GCGC 1 cut(s) 2320
Kpn2I TCCGGA 1 cut(s) 757
LguI GCTCTTC 1 cut(s) 2282
LmnI GCTCC 4 cut(s) 18, 120, 600, 801
Lsp1109I GCAGC 6 cut(s) 297, 898, 1278, 1392, 1507, 2309
LweI GCATC 2 cut(s) 1150, 2530
MaeI CTAG 5 cut(s) 572, 2168, 2213, 2846, 2939
MaeII ACGT 3 cut(s) 226, 1011, 1934
MaeIII GTNAC 5 cut(s) 1299, 1762, 2551, 2942, 2970
MbiI CCGCTC 1 cut(s) 2778
MfeI CAATTG 4 cut(s) 366, 604, 1859, 2218
MflI RGATCY 4 cut(s) 837, 896, 923, 3022
MhlI GDGCHC 1 cut(s) 537
MlsI TGGCCA 1 cut(s) 1865
MluNI TGGCCA 1 cut(s) 1865
MmeI TCCRAC 6 cut(s) 438, 1032, 1335, 1848, 2885, 3022
Mox20I TGGCCA 1 cut(s) 1865
MroI TCCGGA 1 cut(s) 757
MroXI GAANNNNTTC 2 cut(s) 499, 839
MscI TGGCCA 1 cut(s) 1865
MslI CAYNNNNRTG 2 cut(s) 57, 573
Msp20I TGGCCA 1 cut(s) 1865
MspA1I CMGCKG 2 cut(s) 1498, 3154
MspI CCGG 6 cut(s) 420, 758, 830, 1910, 2706, 2865
MspR9I CCNGG 7 cut(s) 421, 492, 938, 1632, 2246, 2371, 2427
MunI CAATTG 4 cut(s) 366, 604, 1859, 2218
Mva1269I GAATGC 3 cut(s) 1905, 1980, 2354
MvaI CCWGG 6 cut(s) 492, 938, 1632, 2246, 2371, 2427
MwoI GCNNNNNNNGC 8 cut(s) 189, 273, 282, 609, 1288, 2298, 2349, 2459
NciI CCSGG 1 cut(s) 421
NlaIII CATG 8 cut(s) 805, 1530, 1694, 2448, 2482, 2622, 3124, 3188
NlaIV GGNNCC 4 cut(s) 611, 898, 2476, 3209
NmuCI GTSAC 1 cut(s) 2970
NspI RCATGY 1 cut(s) 3188
NspV TTCGAA 1 cut(s) 2762
OliI CACNNNNGTG 1 cut(s) 57
PagI TCATGA 1 cut(s) 801
PaqCI CACCTGC 1 cut(s) 2515
PciI ACATGT 1 cut(s) 3184
PciSI GCTCTTC 1 cut(s) 2282
PctI GAATGC 3 cut(s) 1905, 1980, 2354
PdmI GAANNNNTTC 2 cut(s) 499, 839
PflMI CCANNNNNTGG 1 cut(s) 2086
PfoI TCCNGGA 1 cut(s) 490
PkrI GCNGC 6 cut(s) 287, 888, 1293, 1382, 1497, 2324
Ppu21I YACGTR 1 cut(s) 1935
PpuMI RGGWCCY 2 cut(s) 1397, 1775
PscI ACATGT 1 cut(s) 3184
PshBI ATTAAT 3 cut(s) 1188, 1545, 2490
Psp5II RGGWCCY 2 cut(s) 1397, 1775
Psp6I CCWGG 6 cut(s) 490, 936, 1630, 2244, 2369, 2425
PspGI CCWGG 6 cut(s) 490, 936, 1630, 2244, 2369, 2425
PspN4I GGNNCC 4 cut(s) 611, 898, 2476, 3209
PspPI GGNCC 9 cut(s) 677, 964, 1397, 1669, 1775, 2048, 2924, 3170, 3207
PspPPI RGGWCCY 2 cut(s) 1397, 1775
PsrI GAACNNNNNNTAC 2 cut(s) 1928, 1960
PstI CTGCAG 1 cut(s) 2156
PstNI CAGNNNCTG 3 cut(s) 1498, 2086, 2370
PsuI RGATCY 4 cut(s) 837, 896, 923, 3022
PvuII CAGCTG 2 cut(s) 1498, 3154
RsaI GTAC 7 cut(s) 823, 849, 1357, 1937, 2094, 2310, 2531
RsaNI GTAC 7 cut(s) 822, 848, 1356, 1936, 2093, 2309, 2530
RseI CAYNNNNRTG 2 cut(s) 57, 573
SapI GCTCTTC 1 cut(s) 2282
SatI GCNGC 6 cut(s) 286, 887, 1292, 1381, 1496, 2323
Sau96I GGNCC 9 cut(s) 677, 964, 1397, 1669, 1775, 2048, 2924, 3170, 3207
ScaI AGTACT 1 cut(s) 2094
ScrFI CCNGG 7 cut(s) 421, 492, 938, 1632, 2246, 2371, 2427
SduI GDGCHC 1 cut(s) 537
SfaNI GCATC 2 cut(s) 1150, 2530
SfcI CTRYAG 2 cut(s) 857, 2152
SfuI TTCGAA 1 cut(s) 2762
SinI GGWCC 4 cut(s) 1397, 1669, 1775, 3207
SmiMI CAYNNNNRTG 2 cut(s) 57, 573
SmlI CTYRAG 7 cut(s) 512, 640, 750, 1510, 1882, 1900, 2513
SmoI CTYRAG 7 cut(s) 512, 640, 750, 1510, 1882, 1900, 2513
SnaBI TACGTA 1 cut(s) 1935
SpeI ACTAGT 1 cut(s) 2845
SsiI CCGC 2 cut(s) 884, 2778
SspI AATATT 2 cut(s) 1351, 1489
SspMI CTAG 5 cut(s) 572, 2168, 2213, 2846, 2939
StyD4I CCNGG 7 cut(s) 419, 490, 936, 1630, 2244, 2369, 2425
StyI CCWWGG 1 cut(s) 3199
TaaI ACNGT 9 cut(s) 40, 1074, 1112, 1388, 2366, 2474, 2551, 2596, 2931
TaiI ACGT 3 cut(s) 229, 1014, 1937
TaqI TCGA 8 cut(s) 1094, 1230, 1251, 2520, 2762, 2834, 2842, 3178
TatI WGTACW 3 cut(s) 2092, 2308, 2529
TscAI CASTG 8 cut(s) 223, 253, 510, 1205, 1471, 2066, 2091, 2371
TseFI GTSAC 1 cut(s) 2970
TseI GCWGC 6 cut(s) 285, 886, 1291, 1380, 1495, 2322
Tsp45I GTSAC 1 cut(s) 2970
TspGWI ACGGA 3 cut(s) 2265, 2970, 3024
TspRI CASTG 8 cut(s) 223, 253, 510, 1205, 1471, 2066, 2091, 2371
Van91I CCANNNNNTGG 1 cut(s) 2086
VpaK11BI GGWCC 4 cut(s) 1397, 1669, 1775, 3207
VspI ATTAAT 3 cut(s) 1188, 1545, 2490
XbaI TCTAGA 2 cut(s) 571, 2167
XceI RCATGY 1 cut(s) 3188
XmiI GTMKAC 2 cut(s) 746, 2158
XmnI GAANNNNTTC 2 cut(s) 499, 839
XspI CTAG 5 cut(s) 572, 2168, 2213, 2846, 2939
ZrmI AGTACT 1 cut(s) 2094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.