Rroxscaffold_6G00403270

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
25721778 .. 25723316
1539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00403270.1

Sequence Viewer

Length: 1539 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCCTATTCACTACCACTGTTACTAACCTTATCCCCGCAGTTCACAGCAACTGCATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAGAAAAGTCTTGTAATTGAATATTCTTCTGAATCCTCCAAGCTTATCACATGGAATTCGAGTACAGACTGCTGTTCTTGGCTTGGTGTAAATTGCAGCACTAATGGGCGTGTTGTTGGACTTGACCTCAGCGGGGAGTTTGTCCCATCCAGCATTGACAATTTCAGCAGTCTTTTCCAACTTCAACATCTTCAGAGCCTCAACTTAGCCTATACCTTCTTCTTTTTCTCTTTAATTCCATCTGCAACTCCATCTTCACTTCCATCTGGAATTGGAAAGTTTGCAAATTTGAGGTATTTGAATTTAAGTCATGCTGTTTTTAGTGGGGATATTCCCACTGAGATTGCACGCTTGACAAGGTTGAAGGTTCTTGATCTCTCTATGTATTACTCGCAACGGAAAAGACTCGAGAATTCGAATTTAGGCACCTTGATCCAGAACCTTACAGAGCTTACAGAATTGAATCTGGATGGTATGAATCTATCTGAGGAATCTCACTGGAGCCAAACCATATCATCTTCACTTCCAAAGCTGAGTGTGTTGAGCTTGTCCAATTGTGATCTTTCAGGCCCTATTCATGAATCTTTTGCCAGGCTTGATTCTCTATCCACGTTAATATTGCATGGAAACAATATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCTGAAAGTAACATCCATGGAGCATTTCCCAAAGAGATATTCCAGGTACCTACACTACAGTCTGTTGACCTATCAGATAATTCAGAGCTTCGTGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAATCCTTAGTTCTATCCATGACCAATTTTTCAGGTGTCTTGCCGGACTCTATTGGCAACCTTAAAAAGCTGTCTGAATTAGATCTTTCAGAGTGCAATTTCACAGGAGCAGTCCCAAAGTCACTGGCAAACCTAACAGAATTGGGGGTTTTGGACTTGTCATTCAACAAGTTTTCTGGTCCGATTAATTCTGTTCAATGGGACAAGCTCATCAAGCTTGAGTATCTCGACTTGTCTGACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTCTCTATTCCCTTGCTGCAGAGCTTACTACTTCCTGGAAATCACTTCTCTGGTCAGCTGCTTGAATTTTCTAATGTCTCTTCGTCCTCGCTACTCTCTCTTGATTTGAGTAGGAACAATTTGGAAGGATCCATACCTGTGTCTATCCTTAATCTTCCAAAGCTTGATTTCTTTAATCTTTATTCAAACAACTTGAGTGGTTTTCCTTTTTATGGCCTTCAGGAGTCGAGAAATCTTTCGTTTCTTGATCTATCCTACAATAGCTTGTTGTTCAATCATAGTGGTACCAACTCATCACACCCTCTCTCCTTCAGATTAAAACCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

512

Amino Acids

56.41

Weight (kDa)

5.46

Isoelectric Point (pI)

41.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 72 1.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 99 - 269 1.2e-08 Leucine-rich repeat region
LRR_8 PF13855 240 - 297 4.4e-07 Leucine rich repeat
LRR_14 PF23598 264 - 470 7.5e-09 Leucine-rich repeat region
LRR_8 PF13855 312 - 371 4.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 856, 1496
AccB1I GGYRCC 3 cut(s) 542, 856, 1496
AccB7I CCANNNNNTGG 1 cut(s) 929
AciI CCGC 2 cut(s) 66, 249
AclWI GGATC 4 cut(s) 544, 940, 1335, 1348
AcsI RAATTY 7 cut(s) 172, 403, 418, 529, 535, 770, 1277
AcuI CTGAAG 3 cut(s) 293, 1415, 1507
AfaI GTAC 3 cut(s) 181, 858, 1498
AfiI CCNNNNNNNGG 3 cut(s) 250, 929, 1424
AjnI CCWGG 3 cut(s) 707, 852, 1246
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
Alw26I GTCTC 3 cut(s) 812, 1212, 1294
AlwI GGATC 4 cut(s) 544, 940, 1335, 1348
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 524
AoxI GGCC 2 cut(s) 685, 1426
ApeKI GCWGC 3 cut(s) 213, 1228, 1270
ApoI RAATTY 7 cut(s) 172, 403, 418, 529, 535, 770, 1277
AseI ATTAAT 1 cut(s) 1125
Asp700I GAANNNNTTC 1 cut(s) 1447
Asp718I GGTACC 2 cut(s) 856, 1496
AspS9I GGNCC 3 cut(s) 686, 758, 1118
AsuII TTCGAA 1 cut(s) 533
AvaI CYCGRG 1 cut(s) 524
AvaII GGWCC 2 cut(s) 758, 1118
BamHI GGATCC 1 cut(s) 1340
BanI GGYRCC 3 cut(s) 542, 856, 1496
BarI GAAGNNNNNNTAC 2 cut(s) 1329, 1361
BbvCI CCTCAGC 1 cut(s) 245
BbvI GCAGC 3 cut(s) 225, 1215, 1257
BccI CCATC 5 cut(s) 271, 364, 376, 388, 581
BciT130I CCWGG 3 cut(s) 709, 854, 1248
BcoDI GTCTC 3 cut(s) 812, 1212, 1294
BfmI CTRYAG 2 cut(s) 866, 1229
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 3 cut(s) 214, 1229, 1271
BlsI GCNGC 3 cut(s) 215, 1230, 1272
Bme1390I CCNGG 3 cut(s) 709, 854, 1248
Bme18I GGWCC 2 cut(s) 758, 1118
BmeT110I CYCGRG 1 cut(s) 524
BmgT120I GGNCC 3 cut(s) 686, 758, 1118
BmiI GGNNCC 7 cut(s) 544, 620, 765, 858, 907, 1342, 1498
BmrFI CCNGG 3 cut(s) 709, 854, 1248
BpmI CTGGAG 1 cut(s) 637
Bpu10I CCTNAGC 1 cut(s) 245
Bpu14I TTCGAA 1 cut(s) 533
BpuEI CTTGAG 3 cut(s) 823, 1178, 1426
BsaJI CCNNGG 1 cut(s) 826
BsaWI WCCGGW 2 cut(s) 760, 913
BsaXI ACNNNNNCTCC 2 cut(s) 1502, 1532
Bsc4I CCNNNNNNNGG 3 cut(s) 250, 929, 1424
Bse1I ACTGG 2 cut(s) 620, 1068
Bse3DI GCAATG 1 cut(s) 104
BseBI CCWGG 3 cut(s) 709, 854, 1248
BseDI CCNNGG 1 cut(s) 826
BseGI GGATG 3 cut(s) 263, 592, 822
BseLI CCNNNNNNNGG 3 cut(s) 250, 929, 1424
BseMI GCAATG 1 cut(s) 104
BseMII CTCAG 4 cut(s) 259, 447, 594, 641
BseNI ACTGG 2 cut(s) 620, 1068
BseXI GCAGC 3 cut(s) 225, 1215, 1257
BshFI GGCC 2 cut(s) 687, 1428
BshNI GGYRCC 3 cut(s) 542, 856, 1496
BsiHKCI CYCGRG 1 cut(s) 524
BsiSI CCGG 3 cut(s) 761, 914, 983
BslFI GGGAC 3 cut(s) 245, 1037, 1154
BslI CCNNNNNNNGG 3 cut(s) 250, 929, 1424
BsmAI GTCTC 3 cut(s) 812, 1212, 1294
BsmFI GGGAC 3 cut(s) 245, 1037, 1154
BsnI GGCC 2 cut(s) 687, 1428
BsoBI CYCGRG 1 cut(s) 524
Bsp119I TTCGAA 1 cut(s) 533
Bsp143I GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
Bsp19I CCATGG 1 cut(s) 826
BspACI CCGC 2 cut(s) 66, 249
BspANI GGCC 2 cut(s) 687, 1428
BspCNI CTCAG 4 cut(s) 258, 448, 595, 642
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 7 cut(s) 544, 620, 765, 858, 907, 1342, 1498
BspMAI CTGCAG 1 cut(s) 1233
BspPI GGATC 4 cut(s) 544, 940, 1335, 1348
BspT104I TTCGAA 1 cut(s) 533
BspT107I GGYRCC 3 cut(s) 542, 856, 1496
BsrDI GCAATG 1 cut(s) 104
BsrI ACTGG 2 cut(s) 620, 1068
BssECI CCNNGG 1 cut(s) 826
BssMI GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
BssT1I CCWWGG 1 cut(s) 826
Bst2UI CCWGG 3 cut(s) 709, 854, 1248
Bst4CI ACNGT 2 cut(s) 49, 870
Bst6I CTCTTC 1 cut(s) 1297
BstBI TTCGAA 1 cut(s) 533
BstC8I GCNNGC 1 cut(s) 466
BstDEI CTNAG 6 cut(s) 245, 322, 456, 603, 650, 946
BstDSI CCRYGG 1 cut(s) 826
BstF5I GGATG 3 cut(s) 263, 592, 822
BstKTI GATC 7 cut(s) 493, 552, 679, 935, 1024, 1343, 1462
BstMAI GTCTC 3 cut(s) 812, 1212, 1294
BstMBI GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
BstMWI GCNNNNNNNGC 1 cut(s) 1153
BstNI CCWGG 3 cut(s) 709, 854, 1248
BstSCI CCNGG 3 cut(s) 707, 852, 1246
BstSFI CTRYAG 2 cut(s) 866, 1229
BstV1I GCAGC 3 cut(s) 225, 1215, 1257
BstX2I RGATCY 3 cut(s) 932, 1021, 1340
BstYI RGATCY 3 cut(s) 932, 1021, 1340
BsuRI GGCC 2 cut(s) 687, 1428
BtgI CCRYGG 1 cut(s) 826
BtsCI GGATG 3 cut(s) 263, 592, 822
BtsIMutI CAGTG 4 cut(s) 45, 453, 613, 1061
Cac8I GCNNGC 1 cut(s) 466
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 694
Cfr13I GGNCC 3 cut(s) 686, 758, 1118
Csp6I GTAC 3 cut(s) 180, 857, 1497
CspCI CAANNNNNGTGG 6 cut(s) 442, 477, 1390, 1425, 1474, 1509
CviAII CATG 6 cut(s) 168, 428, 695, 740, 827, 958
CviQI GTAC 3 cut(s) 180, 857, 1497
DdeI CTNAG 6 cut(s) 245, 322, 456, 603, 650, 946
DpnI GATC 7 cut(s) 492, 551, 678, 934, 1023, 1342, 1461
DpnII GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
Eam1104I CTCTTC 1 cut(s) 1297
EarI CTCTTC 1 cut(s) 1297
Eco130I CCWWGG 1 cut(s) 826
Eco47I GGWCC 2 cut(s) 758, 1118
Eco57I CTGAAG 3 cut(s) 293, 1415, 1507
Eco88I CYCGRG 1 cut(s) 524
EcoO109I RGGNCCY 1 cut(s) 686
EcoRI GAATTC 2 cut(s) 172, 529
EcoRII CCWGG 3 cut(s) 707, 852, 1246
EcoT14I CCWWGG 1 cut(s) 826
ErhI CCWWGG 1 cut(s) 826
FaeI CATG 6 cut(s) 171, 431, 698, 743, 830, 961
FaqI GGGAC 3 cut(s) 245, 1037, 1154
FatI CATG 6 cut(s) 167, 427, 694, 739, 826, 957
FauI CCCGC 2 cut(s) 73, 242
Fnu4HI GCNGC 3 cut(s) 214, 1229, 1271
FokI GGATG 3 cut(s) 250, 599, 809
Fsp4HI GCNGC 3 cut(s) 214, 1229, 1271
GluI GCNGC 3 cut(s) 214, 1229, 1271
GsuI CTGGAG 1 cut(s) 637
HaeIII GGCC 2 cut(s) 687, 1428
HapII CCGG 3 cut(s) 761, 914, 983
Hin1II CATG 6 cut(s) 171, 431, 698, 743, 830, 961
HincII GTYRAC 1 cut(s) 877
HindII GTYRAC 1 cut(s) 877
HindIII AAGCTT 4 cut(s) 158, 790, 1154, 1373
HpaII CCGG 3 cut(s) 761, 914, 983
Hpy166II GTNNAC 2 cut(s) 73, 877
Hpy8I GTNNAC 2 cut(s) 73, 877
HpyAV CCTTC 6 cut(s) 343, 475, 1222, 1331, 1439, 1531
HpyCH4III ACNGT 2 cut(s) 49, 870
HpyCH4IV ACGT 1 cut(s) 728
HpyCH4V TGCA 8 cut(s) 84, 213, 362, 401, 464, 739, 1035, 1231
HpyF10VI GCNNNNNNNGC 1 cut(s) 1153
HpyF3I CTNAG 6 cut(s) 245, 322, 456, 603, 650, 946
HpySE526I ACGT 1 cut(s) 728
Hsp92II CATG 6 cut(s) 171, 431, 698, 743, 830, 961
KpnI GGTACC 2 cut(s) 860, 1500
Kzo9I GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
LmnI GCTCC 4 cut(s) 114, 618, 830, 1046
Lsp1109I GCAGC 3 cut(s) 225, 1215, 1257
MaeII ACGT 1 cut(s) 728
MaeIII GTNAC 3 cut(s) 49, 818, 1059
MalI GATC 7 cut(s) 492, 551, 678, 934, 1023, 1342, 1461
MboI GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
MboII GAAGA 8 cut(s) 16, 135, 299, 328, 363, 627, 1284, 1358
MfeI CAATTG 1 cut(s) 670
MflI RGATCY 3 cut(s) 932, 1021, 1340
MlyI GAGTC 4 cut(s) 516, 814, 980, 1445
MmeI TCCRAC 2 cut(s) 214, 319
MnlI CCTC 8 cut(s) 26, 163, 254, 326, 402, 598, 1309, 1524
MroXI GAANNNNTTC 1 cut(s) 1447
MseI TTAA 8 cut(s) 350, 422, 731, 1002, 1125, 1362, 1386, 1529
MslI CAYNNNNRTG 1 cut(s) 1349
MspA1I CMGCKG 2 cut(s) 249, 1270
MspI CCGG 3 cut(s) 761, 914, 983
MspR9I CCNGG 3 cut(s) 709, 854, 1248
MunI CAATTG 1 cut(s) 670
MvaI CCWGG 3 cut(s) 709, 854, 1248
MwoI GCNNNNNNNGC 1 cut(s) 1153
NcoI CCATGG 1 cut(s) 826
NdeII GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
NlaIII CATG 6 cut(s) 171, 431, 698, 743, 830, 961
NlaIV GGNNCC 7 cut(s) 544, 620, 765, 858, 907, 1342, 1498
NmuCI GTSAC 1 cut(s) 1059
NspV TTCGAA 1 cut(s) 533
PaeR7I CTCGAG 1 cut(s) 524
PagI TCATGA 1 cut(s) 694
PdmI GAANNNNTTC 1 cut(s) 1447
PfeI GAWTC 7 cut(s) 149, 580, 595, 608, 698, 716, 941
PflMI CCANNNNNTGG 1 cut(s) 929
PfoI TCCNGGA 1 cut(s) 1246
PkrI GCNGC 3 cut(s) 215, 1230, 1272
PleI GAGTC 4 cut(s) 516, 813, 980, 1444
PpsI GAGTC 4 cut(s) 516, 813, 980, 1444
PshBI ATTAAT 1 cut(s) 1125
Psp6I CCWGG 3 cut(s) 707, 852, 1246
PspGI CCWGG 3 cut(s) 707, 852, 1246
PspN4I GGNNCC 7 cut(s) 544, 620, 765, 858, 907, 1342, 1498
PspPI GGNCC 3 cut(s) 686, 758, 1118
PstI CTGCAG 1 cut(s) 1233
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 3 cut(s) 932, 1021, 1340
PvuII CAGCTG 1 cut(s) 1270
RsaI GTAC 3 cut(s) 181, 858, 1498
RsaNI GTAC 3 cut(s) 180, 857, 1497
RseI CAYNNNNRTG 1 cut(s) 1349
SaqAI TTAA 8 cut(s) 350, 422, 731, 1002, 1125, 1362, 1386, 1529
SatI GCNGC 3 cut(s) 214, 1229, 1271
Sau3AI GATC 7 cut(s) 490, 549, 676, 932, 1021, 1340, 1459
Sau96I GGNCC 3 cut(s) 686, 758, 1118
SchI GAGTC 4 cut(s) 516, 814, 980, 1445
ScrFI CCNGG 3 cut(s) 709, 854, 1248
SfcI CTRYAG 2 cut(s) 866, 1229
Sfr274I CTCGAG 1 cut(s) 524
SfuI TTCGAA 1 cut(s) 533
SinI GGWCC 2 cut(s) 758, 1118
SlaI CTCGAG 1 cut(s) 524
SmiMI CAYNNNNRTG 1 cut(s) 1349
SmlI CTYRAG 4 cut(s) 524, 802, 1157, 1405
SmoI CTYRAG 4 cut(s) 524, 802, 1157, 1405
SsiI CCGC 2 cut(s) 66, 249
SspI AATATT 2 cut(s) 140, 735
StyD4I CCNGG 3 cut(s) 707, 852, 1246
StyI CCWWGG 1 cut(s) 826
TaaI ACNGT 2 cut(s) 49, 870
TaiI ACGT 1 cut(s) 731
TaqI TCGA 6 cut(s) 176, 525, 533, 939, 1167, 1439
TatI WGTACW 1 cut(s) 179
TfiI GAWTC 7 cut(s) 149, 580, 595, 608, 698, 716, 941
Tru1I TTAA 8 cut(s) 350, 422, 731, 1002, 1125, 1362, 1386, 1529
Tru9I TTAA 8 cut(s) 350, 422, 731, 1002, 1125, 1362, 1386, 1529
TscAI CASTG 4 cut(s) 52, 460, 620, 1068
TseFI GTSAC 1 cut(s) 1059
TseI GCWGC 3 cut(s) 213, 1228, 1270
Tsp45I GTSAC 1 cut(s) 1059
TspDTI ATGAA 3 cut(s) 608, 683, 711
TspGWI ACGGA 1 cut(s) 529
TspRI CASTG 4 cut(s) 52, 460, 620, 1068
Van91I CCANNNNNTGG 1 cut(s) 929
VpaK11BI GGWCC 2 cut(s) 758, 1118
VspI ATTAAT 1 cut(s) 1125
XapI RAATTY 7 cut(s) 172, 403, 418, 529, 535, 770, 1277
XhoI CTCGAG 1 cut(s) 524
XmnI GAANNNNTTC 1 cut(s) 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.