Prupe.6G281100_v2.0.a1

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000047
Physical Location & Seq
Forward (+)
26269777 .. 26272029
2253 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G281100.1

Sequence Viewer

Length: 2253 bp
ATGAAACATTTGCTCCAATATTTCTTGCTCCTATTCTTAATCCCTAAAATCTGTTTTACCATCATCCCTGCCGTTCACAGCCTCTGCACTAAAGACCAGCAACTATCATTGCTCCATTTGAAGAAAAGCCTTCAATTTTCTCATGATCCTGATTCTGATTCATACCCAACCAAGGTTATATCTTGGAATTCAAGCACCGATTGTTGTTCTTGGCTTGGTGTTAATTGCAGTAGTGATGGGCATGTCGTTGGTCTTGACCTTAGCAGCGAAGCTATCAACGATGGCATTGACGATTCAAGCAGTCTCTTCGATCTTCAACACCTTCAAAGCCTCAATTTGGCTGACAACCATTTTACCTATGGTACTCGCATTCCATCTGCAATCGGAAAGCTTGTGAACTTGAGGTATCTAAATTTATCATCTTGCAGTTTCTATGGATCAATCCCAAAGTCAATAGCAAATCTAACACAATTGGTTAGTTTGCATTTGGGATTAAATACGTTCAGTGGTTCAATTGATTCTATTAGCTGGGAAAACCTTATTAATCTGGTAGACCTCCAGATGGATGACAACCTACTTGAGGGGAGTATTCCATCGTCTCTCTTTTATCTTCCCTTATTGACACAACTAGTACTTTCCCGCAATCAATTCTCTGGTAAACTTCATGCATTTTCTAACACCTCTTCCGACTTAGAATATTTGGACCTTTCAGAAAACCAGATTCAAGGCAAGATACCCCATTGGATTTGGAGTTTCAGTCATCTTTATTACCTAAATCTTTCTTGCAACTCTTTGGTAACTCTAGAAGCTCCTTTATATAATTCTAGTGTATCAATAGTTGACCTTCATTCAAACCAACTCCAGGGTCAAATCCCAACTTTCATACCATTTGGTTACCAGCTGGATTACTCAGGCAACCATTTCAATTCTATACCATCTGACATTGGTTATTTCTTCACTTCCACAATGTTCTTCTCTCTTTCAAGCAATAACTTGCATGGGCTCATTCCGGCATCAATATGCAATGCGACAAGTTTTCTTATGAGTCTTGATCTGTCCAATAATTTTCTGAGTGGCATTATTCCCCCATGCTTGACTGCAATGCGCGGTCTCAGAGTACTTAATTTAGCAAGAAACAACCTCACTGGAACTATTTCTAATTTTCAAGTTACTGAATATAGTTTATTAGAAATTCTAAAGCTCGATGGAAATCAGTTAGGTGGTCAGTTTCCAAAATCTCTAGGTAACTGCATACAGTTACAGGTTTTAAACTTGGGAAACAATCGTATAACAGATACATTTCCATGCTTGTTAAAAAACATGTCCACCTTGCGTGTCCTTGTGTTGCGGTCCAACAACTTCTATGGAGGAATTGGATGTCCCAACACCTATGGCACCTGGCCAGTGCTTCAAATCATACACCTAGCTCACAACAATTTCACTGGTGAAATACCGGGAATATTTTTGACAACATGGCAGGTAATGATGGCTCCCGAGGATGGTCCCCTATCGATTGTCAAATTCCAACTGGATACAATTATTGCGGGAAAATCAATGTTGATTGATTATTCTTTTAATGATCGTATAACAGTTACCAGCAAAGGGTTAGAGATGGATCTAGTAAGGATTCTATCTATCTTCACCTTGATTGACTTCTCTTGCAACAACTTCAGTGGACCAATACCTAAGGAAATGGGAGAATTCAAATCACTACATGTCCTTAACTTGTCCAGAAATTCTTTGACAGGCGAAATCCCATCCTCATTTGGTAACATGCAGGTACTCGAGTCCTTGGACCTGTCACAGAACAAGTTGGGCGGGGAAATTCCACAACAGTTGGCAAAGCTTACTTTCCTTTCGTTCTTGAATATCTCATATAATCAACTGGTCGGCAGGATCCCACCCAGTACTCAGTTTTCAACATTTCCAAAAGACTCATTTACAGGAAACAAAGGACTATGGGGGCCTCCTTTGACAGTGGATAACAAAACAGGATTATCACCACCACCAGCATTAAATGGAAGCCTTCCAAATTCTGGCCATCGTGGGATTAATTGGGATCTGATCAGTGTTGAAATTGGATTTACAGTTGGCTTTGGAGCTTCCGTTGGGTCACTTGTGTTGTGCAAGAGATGGAGTAAGTGGTATTACAGAGCTATGTACAGGATGGTTCTTAAGATATTCCCACAGCTGGAGGAAAGAATTGGAATTCATCGAAGACATGTTCACATAAATCGAAGGTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

751

Amino Acids

83.6

Weight (kDa)

6.72

Isoelectric Point (pI)

32.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1468, 1768
AccB1I GGYRCC 1 cut(s) 1394
AccB7I CCANNNNNTGG 1 cut(s) 2036
AccI GTMKAC 1 cut(s) 552
AccII CGCG 1 cut(s) 1107
AciI CCGC 5 cut(s) 640, 1107, 1348, 1544, 1818
AclWI GGATC 6 cut(s) 140, 445, 1623, 1891, 1904, 2067
AcoI YGGCCR 2 cut(s) 1400, 2038
AcsI RAATTY 9 cut(s) 187, 412, 1191, 1520, 1700, 1735, 1824, 2032, 2208
AcuI CTGAAG 1 cut(s) 1654
AfaI GTAC 6 cut(s) 364, 633, 1119, 1782, 1909, 2162
AfiI CCNNNNNNNGG 9 cut(s) 172, 337, 562, 580, 862, 1499, 1602, 2036, 2191
AflII CTTAAG 1 cut(s) 2174
AflIII ACRYGT 3 cut(s) 1320, 1714, 2221
AhlI ACTAGT 1 cut(s) 628
AjnI CCWGG 2 cut(s) 861, 1397
Alw26I GTCTC 4 cut(s) 308, 603, 1115, 2239
AlwI GGATC 6 cut(s) 140, 445, 1623, 1891, 1904, 2067
AlwNI CAGNNNCTG 1 cut(s) 84
Ama87I CYCGRG 2 cut(s) 1493, 1784
AoxI GGCC 3 cut(s) 1400, 1964, 2038
ApeKI GCWGC 1 cut(s) 264
ApoI RAATTY 9 cut(s) 187, 412, 1191, 1520, 1700, 1735, 1824, 2032, 2208
AseI ATTAAT 2 cut(s) 543, 2052
Asp700I GAANNNNTTC 1 cut(s) 1153
AspLEI GCGC 1 cut(s) 1107
AspS9I GGNCC 6 cut(s) 703, 1350, 1502, 1676, 1795, 1964
AsuC2I CCSGG 1 cut(s) 1455
AsuHPI GGTGA 3 cut(s) 1457, 1633, 1992
AvaI CYCGRG 2 cut(s) 1493, 1784
AvaII GGWCC 5 cut(s) 703, 1350, 1502, 1676, 1795
AxyI CCTNAGG 1 cut(s) 1686
BaeI ACNNNNGTAYC 2 cut(s) 1772, 1805
BalI TGGCCA 2 cut(s) 1402, 2040
BamHI GGATCC 1 cut(s) 1896
BanI GGYRCC 1 cut(s) 1394
BanII GRGCYC 1 cut(s) 1005
BbsI GAAGAC 1 cut(s) 2224
BbvI GCAGC 1 cut(s) 276
BceAI ACGGC 1 cut(s) 56
BcgI CGANNNNNNTGC 2 cut(s) 289, 323
BciT130I CCWGG 2 cut(s) 863, 1399
BciVI GTATCC 1 cut(s) 1525
BclI TGATCA 1 cut(s) 2064
BcnI CCSGG 1 cut(s) 1455
BcoDI GTCTC 4 cut(s) 308, 603, 1115, 2239
BcuI ACTAGT 1 cut(s) 628
BfaI CTAG 6 cut(s) 629, 803, 825, 1241, 1424, 1619
BfrI CTTAAG 1 cut(s) 2174
BfuAI ACCTGC 2 cut(s) 1468, 1768
BfuI GTATCC 1 cut(s) 1525
BisI GCNGC 1 cut(s) 265
BlsI GCNGC 1 cut(s) 266
BmcAI AGTACT 3 cut(s) 633, 1119, 1909
Bme1390I CCNGG 3 cut(s) 863, 1399, 1455
Bme18I GGWCC 5 cut(s) 703, 1350, 1502, 1676, 1795
BmeT110I CYCGRG 2 cut(s) 1493, 1784
BmgT120I GGNCC 6 cut(s) 703, 1350, 1502, 1676, 1795, 1964
BmiI GGNNCC 5 cut(s) 1396, 1491, 1504, 1898, 1965
BmrFI CCNGG 3 cut(s) 863, 1399, 1455
BmrI ACTGGG 1 cut(s) 1899
BmsI GCATC 1 cut(s) 1022
BmuI ACTGGG 1 cut(s) 1899
BpiI GAAGAC 1 cut(s) 2224
BpmI CTGGAG 3 cut(s) 542, 845, 2213
Bpu10I CCTNAGC 1 cut(s) 260
BpuEI CTTGAG 2 cut(s) 421, 599
BpuMI CCSGG 1 cut(s) 1455
Bsa29I ATCGAT 1 cut(s) 1511
BsaBI GATNNNNATC 1 cut(s) 1209
BsaI GGTCTC 1 cut(s) 1115
BsaJI CCNNGG 4 cut(s) 171, 862, 1494, 1791
BsaXI ACNNNNNCTCC 5 cut(s) 27, 742, 772, 2091, 2121
Bsc4I CCNNNNNNNGG 9 cut(s) 172, 337, 562, 580, 862, 1499, 1602, 2036, 2191
Bse1I ACTGG 6 cut(s) 1150, 1403, 1447, 1533, 1890, 1905
Bse21I CCTNAGG 1 cut(s) 1686
Bse3DI GCAATG 3 cut(s) 107, 1030, 1107
Bse8I GATNNNNATC 1 cut(s) 1209
BseBI CCWGG 2 cut(s) 863, 1399
BseCI ATCGAT 1 cut(s) 1511
BseDI CCNNGG 4 cut(s) 171, 862, 1494, 1791
BseGI GGATG 6 cut(s) 63, 571, 1382, 1504, 1757, 2172
BseJI GATNNNNATC 1 cut(s) 1209
BseLI CCNNNNNNNGG 9 cut(s) 172, 337, 562, 580, 862, 1499, 1602, 2036, 2191
BseMI GCAATG 3 cut(s) 107, 1030, 1107
BseMII CTCAG 4 cut(s) 924, 1061, 1126, 1925
BseNI ACTGG 6 cut(s) 1150, 1403, 1447, 1533, 1890, 1905
BseXI GCAGC 1 cut(s) 276
BseYI CCCAGC 1 cut(s) 528
BsgI GTGCAG 1 cut(s) 70
Bsh1236I CGCG 1 cut(s) 1107
BshFI GGCC 3 cut(s) 1402, 1966, 2040
BshNI GGYRCC 1 cut(s) 1394
BshVI ATCGAT 1 cut(s) 1511
BsiHKCI CYCGRG 2 cut(s) 1493, 1784
BsiSI CCGG 2 cut(s) 1010, 1454
BslFI GGGAC 2 cut(s) 1365, 1488
BslI CCNNNNNNNGG 9 cut(s) 172, 337, 562, 580, 862, 1499, 1602, 2036, 2191
BsmAI GTCTC 4 cut(s) 308, 603, 1115, 2239
BsmBI CGTCTC 2 cut(s) 603, 2239
BsmFI GGGAC 2 cut(s) 1365, 1488
BsmI GAATGC 1 cut(s) 369
BsnI GGCC 3 cut(s) 1402, 1966, 2040
Bso31I GGTCTC 1 cut(s) 1115
BsoBI CYCGRG 2 cut(s) 1493, 1784
Bsp1286I GDGCHC 1 cut(s) 1005
Bsp1407I TGTACA 1 cut(s) 2160
Bsp143I GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
BspACI CCGC 5 cut(s) 640, 1107, 1348, 1544, 1818
BspANI GGCC 3 cut(s) 1402, 1966, 2040
BspCNI CTCAG 4 cut(s) 923, 1062, 1125, 1924
BspDI ATCGAT 1 cut(s) 1511
BspFNI CGCG 1 cut(s) 1107
BspHI TCATGA 1 cut(s) 142
BspLI GGNNCC 5 cut(s) 1396, 1491, 1504, 1898, 1965
BspMI ACCTGC 2 cut(s) 1468, 1768
BspPI GGATC 6 cut(s) 140, 445, 1623, 1891, 1904, 2067
BspT107I GGYRCC 1 cut(s) 1394
BspTI CTTAAG 1 cut(s) 2174
BspTNI GGTCTC 1 cut(s) 1115
BsrDI GCAATG 3 cut(s) 107, 1030, 1107
BsrGI TGTACA 1 cut(s) 2160
BsrI ACTGG 6 cut(s) 1150, 1403, 1447, 1533, 1890, 1905
BssECI CCNNGG 4 cut(s) 171, 862, 1494, 1791
BssMI GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
BssT1I CCWWGG 2 cut(s) 171, 1791
Bst2UI CCWGG 2 cut(s) 863, 1399
Bst4CI ACNGT 5 cut(s) 1257, 1591, 1836, 1978, 2089
Bst6I CTCTTC 2 cut(s) 311, 688
BstAFI CTTAAG 1 cut(s) 2174
BstAUI TGTACA 1 cut(s) 2160
BstDEI CTNAG 7 cut(s) 260, 691, 910, 1070, 1112, 1686, 1911
BstEII GGTNACC 1 cut(s) 893
BstENI CCTNNNNNAGG 1 cut(s) 578
BstF5I GGATG 6 cut(s) 63, 571, 1382, 1504, 1757, 2172
BstFNI CGCG 1 cut(s) 1107
BstHHI GCGC 1 cut(s) 1107
BstKTI GATC 9 cut(s) 148, 313, 440, 1054, 1582, 1618, 1899, 2062, 2067
BstMAI GTCTC 4 cut(s) 308, 603, 1115, 2239
BstMBI GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
BstNI CCWGG 2 cut(s) 863, 1399
BstNSI RCATGY 5 cut(s) 245, 1324, 1718, 1777, 2225
BstPI GGTNACC 1 cut(s) 893
BstSCI CCNGG 3 cut(s) 861, 1397, 1453
BstUI CGCG 1 cut(s) 1107
BstV1I GCAGC 1 cut(s) 276
BstV2I GAAGAC 1 cut(s) 2224
BstX2I RGATCY 3 cut(s) 1615, 1896, 2059
BstYI RGATCY 3 cut(s) 1615, 1896, 2059
Bsu15I ATCGAT 1 cut(s) 1511
Bsu36I CCTNAGG 1 cut(s) 1686
BsuI GTATCC 1 cut(s) 1525
BsuRI GGCC 3 cut(s) 1402, 1966, 2040
BsuTUI ATCGAT 1 cut(s) 1511
BtsCI GGATG 6 cut(s) 63, 571, 1382, 1504, 1757, 2172
BtsIMutI CAGTG 7 cut(s) 511, 1143, 1410, 1440, 1678, 1983, 2074
BveI ACCTGC 2 cut(s) 1468, 1768
CaiI CAGNNNCTG 1 cut(s) 84
CciI TCATGA 1 cut(s) 142
CfoI GCGC 1 cut(s) 1107
Cfr13I GGNCC 6 cut(s) 703, 1350, 1502, 1676, 1795, 1964
ClaI ATCGAT 1 cut(s) 1511
Csp6I GTAC 6 cut(s) 363, 632, 1118, 1781, 1908, 2161
CspCI CAANNNNNGTGG 4 cut(s) 1654, 1689, 1818, 1853
CviQI GTAC 6 cut(s) 363, 632, 1118, 1781, 1908, 2161
DdeI CTNAG 7 cut(s) 260, 691, 910, 1070, 1112, 1686, 1911
DpnI GATC 9 cut(s) 147, 312, 439, 1053, 1581, 1617, 1898, 2061, 2066
DpnII GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
DraI TTTAAA 1 cut(s) 1269
EaeI YGGCCR 2 cut(s) 1400, 2038
Eam1104I CTCTTC 2 cut(s) 311, 688
EarI CTCTTC 2 cut(s) 311, 688
Eco130I CCWWGG 2 cut(s) 171, 1791
Eco24I GRGCYC 1 cut(s) 1005
Eco31I GGTCTC 1 cut(s) 1115
Eco47I GGWCC 5 cut(s) 703, 1350, 1502, 1676, 1795
Eco57I CTGAAG 1 cut(s) 1654
Eco81I CCTNAGG 1 cut(s) 1686
Eco88I CYCGRG 2 cut(s) 1493, 1784
Eco91I GGTNACC 1 cut(s) 893
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoO109I RGGNCCY 1 cut(s) 1964
EcoO65I GGTNACC 1 cut(s) 893
EcoRI GAATTC 3 cut(s) 187, 1700, 2208
EcoRII CCWGG 2 cut(s) 861, 1397
EcoT14I CCWWGG 2 cut(s) 171, 1791
EcoT22I ATGCAT 1 cut(s) 670
EcoT38I GRGCYC 1 cut(s) 1005
ErhI CCWWGG 2 cut(s) 171, 1791
Esp3I CGTCTC 2 cut(s) 603, 2239
FaqI GGGAC 2 cut(s) 1365, 1488
FauI CCCGC 3 cut(s) 647, 1537, 1811
FbaI TGATCA 1 cut(s) 2064
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 1 cut(s) 265
FokI GGATG 6 cut(s) 50, 578, 1389, 1511, 1744, 2179
FriOI GRGCYC 1 cut(s) 1005
Fsp4HI GCNGC 1 cut(s) 265
FspBI CTAG 6 cut(s) 629, 803, 825, 1241, 1424, 1619
GlaI GCGC 1 cut(s) 1106
GluI GCNGC 1 cut(s) 265
GsaI CCCAGC 1 cut(s) 532
GsuI CTGGAG 3 cut(s) 542, 845, 2213
HaeIII GGCC 3 cut(s) 1402, 1966, 2040
HapII CCGG 2 cut(s) 1010, 1454
HhaI GCGC 1 cut(s) 1107
Hin6I GCGC 1 cut(s) 1105
HinP1I GCGC 1 cut(s) 1105
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HindIII AAGCTT 2 cut(s) 389, 1844
HinfI GANTC 9 cut(s) 152, 158, 293, 518, 721, 1045, 1627, 1787, 1934
HpaII CCGG 2 cut(s) 1010, 1454
HphI GGTGA 3 cut(s) 1457, 1633, 1992
Hpy166II GTNNAC 8 cut(s) 76, 397, 553, 659, 841, 1326, 1676, 2227
Hpy188I TCNGA 8 cut(s) 157, 386, 688, 712, 940, 1071, 1115, 2064
Hpy188III TCNNGA 9 cut(s) 143, 149, 254, 559, 803, 1049, 1493, 1731, 1864
Hpy8I GTNNAC 8 cut(s) 76, 397, 553, 659, 841, 1326, 1676, 2227
HpyAV CCTTC 5 cut(s) 140, 332, 854, 2036, 2232
HpyCH4III ACNGT 5 cut(s) 1257, 1591, 1836, 1978, 2089
HpyCH4IV ACGT 2 cut(s) 500, 2248
HpyF3I CTNAG 7 cut(s) 260, 691, 910, 1070, 1112, 1686, 1911
HpySE526I ACGT 2 cut(s) 500, 2248
HspAI GCGC 1 cut(s) 1105
Ksp22I TGATCA 1 cut(s) 2064
Kzo9I GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
LmnI GCTCC 6 cut(s) 18, 33, 117, 814, 1495, 2099
Lsp1109I GCAGC 1 cut(s) 276
LweI GCATC 1 cut(s) 1022
MaeI CTAG 6 cut(s) 629, 803, 825, 1241, 1424, 1619
MaeII ACGT 2 cut(s) 500, 2248
MaeIII GTNAC 9 cut(s) 796, 893, 1168, 1244, 1257, 1591, 1769, 1800, 2112
MalI GATC 9 cut(s) 147, 312, 439, 1053, 1581, 1617, 1898, 2061, 2066
MboI GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
MboII GAAGA 9 cut(s) 133, 298, 305, 602, 675, 946, 964, 1630, 2229
MfeI CAATTG 2 cut(s) 470, 513
MflI RGATCY 3 cut(s) 1615, 1896, 2059
MhlI GDGCHC 1 cut(s) 1005
MlsI TGGCCA 2 cut(s) 1402, 2040
MluNI TGGCCA 2 cut(s) 1402, 2040
MlyI GAGTC 3 cut(s) 1054, 1796, 1928
MmeI TCCRAC 3 cut(s) 711, 1377, 1549
Mox20I TGGCCA 2 cut(s) 1402, 2040
Mph1103I ATGCAT 1 cut(s) 670
MroXI GAANNNNTTC 1 cut(s) 1153
MscI TGGCCA 2 cut(s) 1402, 2040
MslI CAYNNNNRTG 2 cut(s) 1018, 1303
Msp20I TGGCCA 2 cut(s) 1402, 2040
MspA1I CMGCKG 2 cut(s) 901, 2191
MspCI CTTAAG 1 cut(s) 2174
MspI CCGG 2 cut(s) 1010, 1454
MspR9I CCNGG 3 cut(s) 863, 1399, 1455
MunI CAATTG 2 cut(s) 470, 513
Mva1269I GAATGC 1 cut(s) 369
MvaI CCWGG 2 cut(s) 863, 1399
MvnI CGCG 1 cut(s) 1107
NciI CCSGG 1 cut(s) 1455
NdeII GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
NlaIV GGNNCC 5 cut(s) 1396, 1491, 1504, 1898, 1965
NmuCI GTSAC 2 cut(s) 1800, 2112
NsiI ATGCAT 1 cut(s) 670
NspI RCATGY 5 cut(s) 245, 1324, 1718, 1777, 2225
PaeR7I CTCGAG 1 cut(s) 1784
PagI TCATGA 1 cut(s) 142
PciI ACATGT 3 cut(s) 1320, 1714, 2221
PctI GAATGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 1153
PfeI GAWTC 6 cut(s) 152, 158, 293, 518, 721, 1627
PflMI CCANNNNNTGG 1 cut(s) 2036
PkrI GCNGC 1 cut(s) 266
PleI GAGTC 3 cut(s) 1053, 1795, 1928
PpsI GAGTC 3 cut(s) 1053, 1795, 1928
PscI ACATGT 3 cut(s) 1320, 1714, 2221
PshBI ATTAAT 2 cut(s) 543, 2052
Psp6I CCWGG 2 cut(s) 861, 1397
PspEI GGTNACC 1 cut(s) 893
PspFI CCCAGC 1 cut(s) 528
PspGI CCWGG 2 cut(s) 861, 1397
PspN4I GGNNCC 5 cut(s) 1396, 1491, 1504, 1898, 1965
PspPI GGNCC 6 cut(s) 703, 1350, 1502, 1676, 1795, 1964
PspXI VCTCGAGB 1 cut(s) 1784
PstNI CAGNNNCTG 1 cut(s) 84
PsuI RGATCY 3 cut(s) 1615, 1896, 2059
PvuII CAGCTG 2 cut(s) 901, 2191
RsaI GTAC 6 cut(s) 364, 633, 1119, 1782, 1909, 2162
RsaNI GTAC 6 cut(s) 363, 632, 1118, 1781, 1908, 2161
RseI CAYNNNNRTG 2 cut(s) 1018, 1303
SatI GCNGC 1 cut(s) 265
Sau3AI GATC 9 cut(s) 145, 310, 437, 1051, 1579, 1615, 1896, 2059, 2064
Sau96I GGNCC 6 cut(s) 703, 1350, 1502, 1676, 1795, 1964
ScaI AGTACT 3 cut(s) 633, 1119, 1909
SchI GAGTC 3 cut(s) 1054, 1796, 1928
ScrFI CCNGG 3 cut(s) 863, 1399, 1455
SduI GDGCHC 1 cut(s) 1005
SfaNI GCATC 1 cut(s) 1022
Sfr274I CTCGAG 1 cut(s) 1784
SinI GGWCC 5 cut(s) 703, 1350, 1502, 1676, 1795
SlaI CTCGAG 1 cut(s) 1784
SmiMI CAYNNNNRTG 2 cut(s) 1018, 1303
SmlI CTYRAG 4 cut(s) 400, 578, 1784, 2174
SmoI CTYRAG 4 cut(s) 400, 578, 1784, 2174
SpeI ACTAGT 1 cut(s) 628
SsiI CCGC 5 cut(s) 640, 1107, 1348, 1544, 1818
SspI AATATT 3 cut(s) 20, 698, 1461
SspMI CTAG 6 cut(s) 629, 803, 825, 1241, 1424, 1619
StyD4I CCNGG 3 cut(s) 861, 1397, 1453
StyI CCWWGG 2 cut(s) 171, 1791
TaaI ACNGT 5 cut(s) 1257, 1591, 1836, 1978, 2089
TaiI ACGT 2 cut(s) 503, 2251
TaqI TCGA 6 cut(s) 309, 1203, 1511, 1785, 2215, 2236
TatI WGTACW 4 cut(s) 631, 1117, 1907, 2160
TfiI GAWTC 6 cut(s) 152, 158, 293, 518, 721, 1627
TscAI CASTG 7 cut(s) 511, 1150, 1410, 1447, 1678, 1983, 2074
TseFI GTSAC 2 cut(s) 1800, 2112
TseI GCWGC 1 cut(s) 264
Tsp45I GTSAC 2 cut(s) 1800, 2112
TspDTI ATGAA 6 cut(s) 17, 150, 653, 836, 871, 2201
TspGWI ACGGA 1 cut(s) 2095
TspRI CASTG 7 cut(s) 511, 1150, 1410, 1447, 1678, 1983, 2074
Van91I CCANNNNNTGG 1 cut(s) 2036
Vha464I CTTAAG 1 cut(s) 2174
VpaK11BI GGWCC 5 cut(s) 703, 1350, 1502, 1676, 1795
VspI ATTAAT 2 cut(s) 543, 2052
XagI CCTNNNNNAGG 1 cut(s) 578
XapI RAATTY 9 cut(s) 187, 412, 1191, 1520, 1700, 1735, 1824, 2032, 2208
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 5 cut(s) 245, 1324, 1718, 1777, 2225
XcmI CCANNNNNNNNNTGG 1 cut(s) 356
XhoI CTCGAG 1 cut(s) 1784
XmiI GTMKAC 1 cut(s) 552
XmnI GAANNNNTTC 1 cut(s) 1153
XspI CTAG 6 cut(s) 629, 803, 825, 1241, 1424, 1619
ZrmI AGTACT 3 cut(s) 633, 1119, 1909
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.