pycom04g14460

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
17378281 .. 17380467
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g14460.1

Sequence Viewer

Length: 2187 bp
ATGGTGAATCTCGACTTGCGACACAATCTACTTAATGGGACTATTCCACCATCTGTGTTTTCTCTTCCCATGCTGCAGAAGCTACAGCTTTCTGACAATGAATTTTCTGGTAAGTTGCCTGAATTTGGTGCTATAGCTGTACTGGACACACTTGATTTGAGTAGAAACAAGTTGGAAGGGCCAATTCCGAAGTCTATCTTGAAATTCCGTCAGCTCAAAATACTTTCACTTTCTTCGAACAACTTCACTGGCTCTTTTCTTCTGAATGATATTCAGCAGCTAAGAAATCTTTCGAGTCTTGATCGATCATTCAATAGCTTGTCTATTAATTACAATGACACCAATTCCTCTCATTCCTTGTTTCCAAATATTACCACATTGAAGTTAGTTTCTGGCAATTTGAGACGAATCCCTGGTTTCTTGAGAAATCAATCAAAATTAGCCACTTTGGACCTATCACAAAACCAGATTCATGGTGAGATACCCAACTGGATTTGGGGGCTCAGTAATCTTTCCCAACTAAATCTTTCTTGCAACTCTCTGGTAACTCTACAAGGTCCCTTCCTCAATCTCACTTCTAATTTGTTTGTGCTTGACCTTCATTCCAACCAGCTTCAGGGACAAATCCCATTTTTTCCACCATCTGCCTCTTATCTGGATTATTCGAGGAACAACTTCAGCTCTAGCATACCGGCAGACATTGGGGTTTTCCTTAATTACACAATATTCTTCTCTCTTTCAAGCAATAAGTTCCAAGGCAGCATTCCAGAATCAATCTGCAAGGCAACATATCTTCAGGTTCTTGATATGTCCAATAATTCTCTAGGTGGACCGATTCCCCAATGCTTGACTGAGATAAGCAGGACACTGGCAGTACTTAATCTGAGGAGAAACAGACTTGGTGGCTCTGTCCCTAATAGATTTCCACAGCATTGTAGTTTAAAAACTCTCGACCTCAGTGGAAATCAGATAGCAGGTCTATTTCCAAAATCTCTTGCCAACTGCACAATGTTAGAGGTTCTAAACATGGGAAACAATCAGATAATGGGTATCTTTCCTCGATTGTTGAAGAATATATCCTCCTTGCGTGTCCTTGTTTTGCGATCCAACCATTTTCATGGACAAATTGGATGTAACATGACCAGTGGTAACTGGCCAAATCTTCAAATTGTTGACATAGCTCACAACAATTTTAGTGGTGCAATACATGGAGGATGTTTGATGACCTGGTCAGCAATGATGGCTGATGAAGATGATGCCATGGTGAAGATTAATCACCTCCAATTTCAAGTTATGCAGTTCAGTCAGGTATATTATCAGGATACTATAACAGTTACCACCAAAGGTCTAGAGATGGAATTGGTAAAGATCTTAACAGTCTTCACCTCGATTGACATCTCCTGCAACAATTTCAATGGATCAATACCTGAGGAAGTGGGAGACCTCAAATCACTCTATGGCCTAAACTTGTCCGGTAATGCTTTCACAGGTACAATCCCATCATCACTGGGTAACCTACAACAGCTTGAGTCCTTGGACCTTTCAGACAACAAACTGAGTGGAACAATTCCACAAGGGCTTGTCAAACTTAATTTCCTTTCTTTCCTGAATCTCTCAAACAATCAACTGGAGGGGAGAATTCCAACTGGCACTCAGATTCAATCTTTTTCACCAGATTCTTTCATTGGCAATACAGGATTGTGTGGGGCACCTTTGCCTAAAAAATGCAGTGATACCAACATGTCACCAGATGCATCACGAACGGGTCGAAACGAAGTGTCAAAAGTTGATTGGCAGTCCATATATACTGGAGCGGGTTACGGAGTGGGAGCAGGAGTTGTTGTTATCCTCTTAATCGTGTGGGAAGAAGGAAGAAACTGGTTAGAGGACAGCATTGACAAAATTCTTCTGGCGATTCTTCCAATGATGGGATATTCGTATAAAACTCGTGCTGAATGGGATGATGAGGACGACGAAGACTTGGAAGAAGAGAGCACGTATATCATGGAAGACTATAGCAGAGACGAGAATGTTTCAGAAGACAGAGTGTTTCGGGGTCCATATTGTGTGTTTTGTTCAAAACTTGATATGAGTAGGAAGAGGGCCATCCATGACCCAAACTGTACATGCCATTTCTCTCCACCTATTACGTCTTCTTCTTCCTCTTCGCACTCATTTTCTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

729

Amino Acids

80.58

Weight (kDa)

5.6

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 13 - 204 5e-07 Leucine-rich repeat region
LRR_8 PF13855 122 - 181 8.4e-08 Leucine rich repeat
LRR_8 PF13855 313 - 372 7.8e-10 Leucine rich repeat
LRR_4 PF12799 313 - 348 2.9e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 484 - 543 5.9e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 965
AccB1I GGYRCC 1 cut(s) 1708
AccBSI CCGCTC 1 cut(s) 1814
AciI CCGC 1 cut(s) 1814
AclWI GGATC 2 cut(s) 1098, 1426
AcoI YGGCCR 1 cut(s) 1154
AcsI RAATTY 5 cut(s) 101, 122, 203, 1638, 1902
AcuI CTGAAG 3 cut(s) 599, 661, 779
AfaI GTAC 4 cut(s) 141, 876, 1492, 2125
AfiI CCNNNNNNNGG 3 cut(s) 125, 616, 1928
AflIII ACRYGT 1 cut(s) 1740
AjnI CCWGG 2 cut(s) 412, 1226
AjuI GAANNNNNNNTTGG 2 cut(s) 747, 779
Alw21I GWGCWC 1 cut(s) 1997
Alw26I GTCTC 3 cut(s) 397, 1434, 2016
AlwI GGATC 2 cut(s) 1098, 1426
AoxI GGCC 4 cut(s) 179, 1154, 1459, 2103
ApeKI GCWGC 3 cut(s) 73, 277, 759
ApoI RAATTY 5 cut(s) 101, 122, 203, 1638, 1902
AseI ATTAAT 2 cut(s) 327, 1272
Asp700I GAANNNNTTC 3 cut(s) 242, 289, 674
AspS9I GGNCC 7 cut(s) 179, 451, 557, 830, 1537, 2057, 2103
AsuHPI GGTGA 7 cut(s) 16, 488, 1268, 1276, 1375, 1662, 1737
AsuII TTCGAA 1 cut(s) 236
AvaII GGWCC 5 cut(s) 451, 557, 830, 1537, 2057
AxyI CCTNAGG 1 cut(s) 1428
BaeGI GKGCMC 1 cut(s) 1711
BalI TGGCCA 1 cut(s) 1156
BanI GGYRCC 1 cut(s) 1708
BanII GRGCYC 1 cut(s) 504
BauI CACGAG 1 cut(s) 1947
BbsI GAAGAC 5 cut(s) 1372, 1983, 2016, 2046, 2145
Bbv12I GWGCWC 1 cut(s) 1997
BbvI GCAGC 3 cut(s) 60, 289, 771
BccI CCATC 7 cut(s) 58, 649, 1234, 1348, 1507, 1921, 2114
BciT130I CCWGG 2 cut(s) 414, 1228
BciVI GTATCC 1 cut(s) 1315
BcoDI GTCTC 3 cut(s) 397, 1434, 2016
BfaI CTAG 3 cut(s) 684, 824, 1349
BfmI CTRYAG 4 cut(s) 74, 83, 132, 2014
BfuAI ACCTGC 1 cut(s) 965
BfuI GTATCC 1 cut(s) 1315
BglII AGATCT 1 cut(s) 1368
BisI GCNGC 3 cut(s) 74, 278, 760
BlsI GCNGC 3 cut(s) 75, 279, 761
BmcAI AGTACT 1 cut(s) 876
Bme1390I CCNGG 2 cut(s) 414, 1228
Bme18I GGWCC 5 cut(s) 451, 557, 830, 1537, 2057
BmgT120I GGNCC 7 cut(s) 179, 451, 557, 830, 1537, 2057, 2103
BmiI GGNNCC 3 cut(s) 559, 1710, 2058
BmrFI CCNGG 2 cut(s) 414, 1228
BmrI ACTGGG 1 cut(s) 1517
BmsI GCATC 3 cut(s) 1246, 1741, 1763
BmuI ACTGGG 1 cut(s) 1517
BpiI GAAGAC 5 cut(s) 1372, 1983, 2016, 2046, 2145
BpmI CTGGAG 2 cut(s) 1649, 1830
Bpu14I TTCGAA 1 cut(s) 236
BpuEI CTTGAG 2 cut(s) 442, 1547
Bsa29I ATCGAT 1 cut(s) 304
BsaAI YACGTR 1 cut(s) 1998
BsaBI GATNNNNATC 1 cut(s) 1394
BsaI GGTCTC 1 cut(s) 1434
BsaJI CCNNGG 4 cut(s) 412, 754, 1260, 1533
BsaWI WCCGGW 1 cut(s) 1472
BsaXI ACNNNNNCTCC 4 cut(s) 1821, 1827, 1851, 1857
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 616, 1928
Bse118I RCCGGY 1 cut(s) 691
Bse21I CCTNAGG 1 cut(s) 1428
Bse3DI GCAATG 1 cut(s) 1242
Bse8I GATNNNNATC 1 cut(s) 1394
BseBI CCWGG 2 cut(s) 414, 1228
BseCI ATCGAT 1 cut(s) 304
BseDI CCNNGG 4 cut(s) 412, 754, 1260, 1533
BseGI GGATG 4 cut(s) 1136, 1220, 1966, 2106
BseJI GATNNNNATC 1 cut(s) 1394
BseLI CCNNNNNNNGG 3 cut(s) 125, 616, 1928
BseMI GCAATG 1 cut(s) 1242
BseMII CTCAG 7 cut(s) 517, 843, 875, 970, 1419, 1547, 1667
BseRI GAGGAG 1 cut(s) 901
BseSI GKGCMC 1 cut(s) 1711
BseXI GCAGC 3 cut(s) 60, 289, 771
BsgI GTGCAG 1 cut(s) 988
BshFI GGCC 4 cut(s) 181, 1156, 1461, 2105
BshNI GGYRCC 1 cut(s) 1708
BshVI ATCGAT 1 cut(s) 304
BsiHKAI GWGCWC 1 cut(s) 1997
BsiSI CCGG 2 cut(s) 692, 1473
BslFI GGGAC 4 cut(s) 52, 543, 633, 896
BslI CCNNNNNNNGG 3 cut(s) 125, 616, 1928
BsmAI GTCTC 3 cut(s) 397, 1434, 2016
BsmBI CGTCTC 2 cut(s) 397, 2016
BsmFI GGGAC 4 cut(s) 52, 543, 633, 896
BsmI GAATGC 1 cut(s) 762
BsnI GGCC 4 cut(s) 181, 1156, 1461, 2105
Bso31I GGTCTC 1 cut(s) 1434
Bsp119I TTCGAA 1 cut(s) 236
Bsp1286I GDGCHC 3 cut(s) 504, 1711, 1997
Bsp1407I TGTACA 1 cut(s) 2123
Bsp143I GATC 5 cut(s) 301, 305, 1103, 1368, 1418
Bsp19I CCATGG 1 cut(s) 1260
BspACI CCGC 1 cut(s) 1814
BspANI GGCC 4 cut(s) 181, 1156, 1461, 2105
BspCNI CTCAG 7 cut(s) 516, 844, 876, 969, 1420, 1548, 1666
BspDI ATCGAT 1 cut(s) 304
BspLI GGNNCC 3 cut(s) 559, 1710, 2058
BspMAI CTGCAG 1 cut(s) 78
BspMI ACCTGC 1 cut(s) 965
BspPI GGATC 2 cut(s) 1098, 1426
BspT104I TTCGAA 1 cut(s) 236
BspT107I GGYRCC 1 cut(s) 1708
BspTNI GGTCTC 1 cut(s) 1434
BsrBI CCGCTC 1 cut(s) 1814
BsrDI GCAATG 1 cut(s) 1242
BsrFI RCCGGY 1 cut(s) 691
BsrGI TGTACA 1 cut(s) 2123
BssAI RCCGGY 1 cut(s) 691
BssECI CCNNGG 4 cut(s) 412, 754, 1260, 1533
BssMI GATC 5 cut(s) 301, 305, 1103, 1368, 1418
BssSI CACGAG 1 cut(s) 1947
BssT1I CCWWGG 3 cut(s) 754, 1260, 1533
Bst2BI CACGAG 1 cut(s) 1947
Bst2UI CCWGG 2 cut(s) 414, 1228
Bst4CI ACNGT 3 cut(s) 1333, 1378, 2123
Bst6I CTCTTC 4 cut(s) 69, 1983, 2093, 2170
BstAUI TGTACA 1 cut(s) 2123
BstBAI YACGTR 1 cut(s) 1998
BstBI TTCGAA 1 cut(s) 236
BstDEI CTNAG 8 cut(s) 281, 503, 852, 884, 956, 1428, 1556, 1653
BstDSI CCRYGG 1 cut(s) 1260
BstEII GGTNACC 1 cut(s) 1511
BstF5I GGATG 4 cut(s) 1136, 1220, 1966, 2106
BstKTI GATC 5 cut(s) 304, 308, 1106, 1371, 1421
BstMAI GTCTC 3 cut(s) 397, 1434, 2016
BstMBI GATC 5 cut(s) 301, 305, 1103, 1368, 1418
BstMWI GCNNNNNNNGC 2 cut(s) 79, 1241
BstNI CCWGG 2 cut(s) 414, 1228
BstNSI RCATGY 2 cut(s) 1744, 2130
BstPI GGTNACC 1 cut(s) 1511
BstSCI CCNGG 2 cut(s) 412, 1226
BstSFI CTRYAG 4 cut(s) 74, 83, 132, 2014
BstSLI GKGCMC 1 cut(s) 1711
BstV1I GCAGC 3 cut(s) 60, 289, 771
BstV2I GAAGAC 5 cut(s) 1372, 1983, 2016, 2046, 2145
BstX2I RGATCY 1 cut(s) 1368
BstXI CCANNNNNNTGG 2 cut(s) 473, 1118
BstYI RGATCY 1 cut(s) 1368
Bsu15I ATCGAT 1 cut(s) 304
Bsu36I CCTNAGG 1 cut(s) 1428
BsuI GTATCC 1 cut(s) 1315
BsuRI GGCC 4 cut(s) 181, 1156, 1461, 2105
BsuTUI ATCGAT 1 cut(s) 304
BtgI CCRYGG 1 cut(s) 1260
BtsCI GGATG 4 cut(s) 1136, 1220, 1966, 2106
BtsI GCAGTG 1 cut(s) 1735
BtsIMutI CAGTG 6 cut(s) 246, 866, 964, 1150, 1505, 1735
BveI ACCTGC 1 cut(s) 965
Cfr10I RCCGGY 1 cut(s) 691
Cfr13I GGNCC 7 cut(s) 179, 451, 557, 830, 1537, 2057, 2103
ClaI ATCGAT 1 cut(s) 304
CsiI ACCWGGT 1 cut(s) 1226
Csp6I GTAC 4 cut(s) 140, 875, 1491, 2124
CspCI CAANNNNNGTGG 4 cut(s) 1177, 1212, 1540, 1575
CviQI GTAC 4 cut(s) 140, 875, 1491, 2124
DdeI CTNAG 8 cut(s) 281, 503, 852, 884, 956, 1428, 1556, 1653
DpnI GATC 5 cut(s) 303, 307, 1105, 1370, 1420
DpnII GATC 5 cut(s) 301, 305, 1103, 1368, 1418
DraI TTTAAA 1 cut(s) 942
EaeI YGGCCR 1 cut(s) 1154
Eam1104I CTCTTC 4 cut(s) 69, 1983, 2093, 2170
EarI CTCTTC 4 cut(s) 69, 1983, 2093, 2170
Eco130I CCWWGG 3 cut(s) 754, 1260, 1533
Eco24I GRGCYC 1 cut(s) 504
Eco31I GGTCTC 1 cut(s) 1434
Eco47I GGWCC 5 cut(s) 451, 557, 830, 1537, 2057
Eco57I CTGAAG 3 cut(s) 599, 661, 779
Eco81I CCTNAGG 1 cut(s) 1428
Eco91I GGTNACC 1 cut(s) 1511
EcoO109I RGGNCCY 1 cut(s) 557
EcoO65I GGTNACC 1 cut(s) 1511
EcoRI GAATTC 1 cut(s) 1638
EcoRII CCWGG 2 cut(s) 412, 1226
EcoT14I CCWWGG 3 cut(s) 754, 1260, 1533
EcoT22I ATGCAT 1 cut(s) 1756
EcoT38I GRGCYC 1 cut(s) 504
ErhI CCWWGG 3 cut(s) 754, 1260, 1533
Esp3I CGTCTC 2 cut(s) 397, 2016
FalI AAGNNNNNCTT 2 cut(s) 182, 214
FaqI GGGAC 4 cut(s) 52, 543, 633, 896
FauI CCCGC 1 cut(s) 1807
Fnu4HI GCNGC 3 cut(s) 74, 278, 760
FokI GGATG 4 cut(s) 1143, 1227, 1973, 2093
FriOI GRGCYC 1 cut(s) 504
Fsp4HI GCNGC 3 cut(s) 74, 278, 760
FspBI CTAG 3 cut(s) 684, 824, 1349
GluI GCNGC 3 cut(s) 74, 278, 760
GsuI CTGGAG 2 cut(s) 1649, 1830
HaeIII GGCC 4 cut(s) 181, 1156, 1461, 2105
HapII CCGG 2 cut(s) 692, 1473
HincII GTYRAC 1 cut(s) 1174
HindII GTYRAC 1 cut(s) 1174
HpaII CCGG 2 cut(s) 692, 1473
HphI GGTGA 7 cut(s) 16, 488, 1268, 1276, 1375, 1662, 1737
Hpy166II GTNNAC 2 cut(s) 830, 1174
Hpy188I TCNGA 9 cut(s) 94, 189, 264, 885, 969, 1041, 1546, 1656, 2038
Hpy8I GTNNAC 2 cut(s) 830, 1174
Hpy99I CGWCG 1 cut(s) 1976
HpyAV CCTTC 4 cut(s) 170, 571, 608, 1862
HpyCH4III ACNGT 3 cut(s) 1333, 1378, 2123
HpyCH4IV ACGT 2 cut(s) 1997, 2150
HpyCH4V TGCA 9 cut(s) 76, 534, 780, 1005, 1202, 1297, 1404, 1728, 1754
HpyF10VI GCNNNNNNNGC 2 cut(s) 79, 1241
HpyF3I CTNAG 8 cut(s) 281, 503, 852, 884, 956, 1428, 1556, 1653
HpySE526I ACGT 2 cut(s) 1997, 2150
Kzo9I GATC 5 cut(s) 301, 305, 1103, 1368, 1418
LmnI GCTCC 2 cut(s) 1811, 1829
Lsp1109I GCAGC 3 cut(s) 60, 289, 771
LweI GCATC 3 cut(s) 1246, 1741, 1763
MabI ACCWGGT 1 cut(s) 1226
MaeI CTAG 3 cut(s) 684, 824, 1349
MaeII ACGT 2 cut(s) 1997, 2150
MaeIII GTNAC 7 cut(s) 544, 1133, 1148, 1333, 1511, 1743, 1817
MalI GATC 5 cut(s) 303, 307, 1105, 1370, 1420
MbiI CCGCTC 1 cut(s) 1814
MboI GATC 5 cut(s) 301, 305, 1103, 1368, 1418
MflI RGATCY 1 cut(s) 1368
MhlI GDGCHC 3 cut(s) 504, 1711, 1997
MlsI TGGCCA 1 cut(s) 1156
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 2 cut(s) 304, 1538
MmeI TCCRAC 4 cut(s) 153, 630, 1131, 1667
Mox20I TGGCCA 1 cut(s) 1156
Mph1103I ATGCAT 1 cut(s) 1756
MroXI GAANNNNTTC 3 cut(s) 242, 289, 674
MscI TGGCCA 1 cut(s) 1156
MseI TTAA 9 cut(s) 33, 327, 714, 879, 941, 1272, 1373, 1590, 1853
MslI CAYNNNNRTG 1 cut(s) 1116
Msp20I TGGCCA 1 cut(s) 1156
MspI CCGG 2 cut(s) 692, 1473
MspR9I CCNGG 2 cut(s) 414, 1228
Mva1269I GAATGC 1 cut(s) 762
MvaI CCWGG 2 cut(s) 414, 1228
MwoI GCNNNNNNNGC 2 cut(s) 79, 1241
NcoI CCATGG 1 cut(s) 1260
NdeII GATC 5 cut(s) 301, 305, 1103, 1368, 1418
NlaIV GGNNCC 3 cut(s) 559, 1710, 2058
NmuCI GTSAC 1 cut(s) 1743
NsiI ATGCAT 1 cut(s) 1756
NspI RCATGY 2 cut(s) 1744, 2130
NspV TTCGAA 1 cut(s) 236
PciI ACATGT 1 cut(s) 1740
PcsI WCGNNNNNNNCGW 1 cut(s) 1765
PctI GAATGC 1 cut(s) 762
PdmI GAANNNNTTC 3 cut(s) 242, 289, 674
PfeI GAWTC 9 cut(s) 7, 408, 469, 770, 835, 1609, 1657, 1676, 1915
PflFI GACNNNGTC 1 cut(s) 1228
PkrI GCNGC 3 cut(s) 75, 279, 761
PleI GAGTC 2 cut(s) 303, 1537
PpsI GAGTC 2 cut(s) 303, 1537
Ppu21I YACGTR 1 cut(s) 1998
PpuMI RGGWCCY 1 cut(s) 557
PscI ACATGT 1 cut(s) 1740
PshBI ATTAAT 2 cut(s) 327, 1272
Psp5II RGGWCCY 1 cut(s) 557
Psp6I CCWGG 2 cut(s) 412, 1226
PspEI GGTNACC 1 cut(s) 1511
PspGI CCWGG 2 cut(s) 412, 1226
PspN4I GGNNCC 3 cut(s) 559, 1710, 2058
PspPI GGNCC 7 cut(s) 179, 451, 557, 830, 1537, 2057, 2103
PspPPI RGGWCCY 1 cut(s) 557
PstI CTGCAG 1 cut(s) 78
PsuI RGATCY 1 cut(s) 1368
PsyI GACNNNGTC 1 cut(s) 1228
RsaI GTAC 4 cut(s) 141, 876, 1492, 2125
RsaNI GTAC 4 cut(s) 140, 875, 1491, 2124
RseI CAYNNNNRTG 1 cut(s) 1116
SaqAI TTAA 9 cut(s) 33, 327, 714, 879, 941, 1272, 1373, 1590, 1853
SatI GCNGC 3 cut(s) 74, 278, 760
Sau3AI GATC 5 cut(s) 301, 305, 1103, 1368, 1418
Sau96I GGNCC 7 cut(s) 179, 451, 557, 830, 1537, 2057, 2103
ScaI AGTACT 1 cut(s) 876
SchI GAGTC 2 cut(s) 304, 1538
ScrFI CCNGG 2 cut(s) 414, 1228
SduI GDGCHC 3 cut(s) 504, 1711, 1997
SexAI ACCWGGT 1 cut(s) 1226
SfaNI GCATC 3 cut(s) 1246, 1741, 1763
SfcI CTRYAG 4 cut(s) 74, 83, 132, 2014
SfuI TTCGAA 1 cut(s) 236
SinI GGWCC 5 cut(s) 451, 557, 830, 1537, 2057
SmiMI CAYNNNNRTG 1 cut(s) 1116
SmlI CTYRAG 2 cut(s) 421, 1526
SmoI CTYRAG 2 cut(s) 421, 1526
SsiI CCGC 1 cut(s) 1814
SspI AATATT 2 cut(s) 370, 726
SspMI CTAG 3 cut(s) 684, 824, 1349
StyD4I CCNGG 2 cut(s) 412, 1226
StyI CCWWGG 3 cut(s) 754, 1260, 1533
TaaI ACNGT 3 cut(s) 1333, 1378, 2123
TaiI ACGT 2 cut(s) 2000, 2153
TaqI TCGA 9 cut(s) 12, 236, 293, 304, 665, 951, 1060, 1388, 1768
TaqII GACCGA 1 cut(s) 847
TatI WGTACW 3 cut(s) 139, 874, 2123
TfiI GAWTC 9 cut(s) 7, 408, 469, 770, 835, 1609, 1657, 1676, 1915
Tru1I TTAA 9 cut(s) 33, 327, 714, 879, 941, 1272, 1373, 1590, 1853
Tru9I TTAA 9 cut(s) 33, 327, 714, 879, 941, 1272, 1373, 1590, 1853
TscAI CASTG 6 cut(s) 253, 873, 964, 1150, 1512, 1735
TseFI GTSAC 1 cut(s) 1743
TseI GCWGC 3 cut(s) 73, 277, 759
Tsp45I GTSAC 1 cut(s) 1743
TspDTI ATGAA 6 cut(s) 114, 461, 590, 1106, 1263, 1672
TspGWI ACGGA 2 cut(s) 197, 1836
TspRI CASTG 6 cut(s) 253, 873, 964, 1150, 1512, 1735
Tth111I GACNNNGTC 1 cut(s) 1228
VpaK11BI GGWCC 5 cut(s) 451, 557, 830, 1537, 2057
VspI ATTAAT 2 cut(s) 327, 1272
XapI RAATTY 5 cut(s) 101, 122, 203, 1638, 1902
XbaI TCTAGA 1 cut(s) 1348
XceI RCATGY 2 cut(s) 1744, 2130
XmnI GAANNNNTTC 3 cut(s) 242, 289, 674
XspI CTAG 3 cut(s) 684, 824, 1349
ZrmI AGTACT 1 cut(s) 876
Zsp2I ATGCAT 1 cut(s) 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.