Prupe.8G054400_v2.0.a1

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000047
Physical Location & Seq
Forward (+)
6207763 .. 6210397
2635 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G054400.1

Sequence Viewer

Length: 2568 bp
ATGAAAACTTTGCTGCATTACTTGTTCCTCCTCTGCTTCAATATCCTCCTCCCTGCAGTTCACAACCAGTGTATTAAAAACCAGCAACAATCGTTGCTCTATTTGAAGAAAAGCCTTCAATTTGATCTACCTTCCCGGCTCATGTCTTGGAATTCAAGCACCGACTGTTGTTCTTGGGGTGGTGTTACTTGCACTAGCAATGGGCACGTTGTTGGTCTTGACCTTAGCCTAGAAACTATCTCCGGTCCAATTCCAGGATCCTTCACCAACTTTCCAAACCTGAGAGAGTTGGACTTGAGTTCGAACTACATCTCTTATATTCCAGGTTCCTTTGCCAACCTTTCAAACCTAAGGGTGTTGGACTTGAGTTGGAACCCCATCTCCGATCCAATTCCAGGATTCTTTGCCAATTTTTCAAAGTTGACTTCCTTGAGTCTCAGTGGTTGTCAATTGAATGGAACATTTCCCAAAGAGATCTTTCAGGTACCTACTCTACAGATTATTGACCTTTCGGGTAATTTTAAACTTGGTGGTTCCTTGCCAGAATTTCCCAAGAATAATGGATCTCTTCAGCGGTTGATTCTACGCCAGACAAACTTTTCAGGGTCACTGCCTGAATCAATTGGAAACCTCAAAATGTTGTTCAGGATAGATCTTTTCAAATGCAATTTTACTGGATCAATCCCGTCGTCACTCTTTTCTCTTCCCTTATTGTCAGAAATAAACCTTTCCTACAATCAATTCTCTGGTGAACTTACATTTTCTAATGTCTCTTCCAACTTAGTTAACCTTGATTTAAGCTTCAACAATTTGGAAGGACAAATATCAGTGTCTATATTTAATTTTCAATTCCTTGAATCACTTCAGCTTTCTTCCAACAATTTCAATACCTTTCCGTTCAATGGCCCTCAACAGCTAAAATATCTTACGAACATCGACCTTTCAAACAATAGCTTGCTGAGTTTATACAATGGTACGGATTCCTCATATTCCTCGTTTCCTCAAATTGTTTCATTGAATTTGGCTGCTAACAATTTGACAACAATCCCATATTTCTTGAGAAATCAATCCACATTATCCAGTTTGAACCTTTCAGAAAACCACATCCAGGGCAAGATACCCCATTGGATTTGGAGTTCCAATCAACTTGATTCCCTAAATCTTTCTTGTAACTCCTTGGTTACTCTGGAACCTCCTTTATATAATTCTACGGTGAAAATTGTTGACCTTCATTCAAATCAACTTCAGGGACAAATCCCCACTTTCCTACCATTTGCCAAGTATCTGGATTACTCGAGAAATAATTTCAGCTCTATACCATCAAATATTGGTGATTTCCTCACAGACACACTGTTCTTCTCTCTTTCGAGCAATAACTTGCATGGGCTCATTCCAGCATCAATATGCAATGCCCCAAATATTCAGATTCTTGATATGTCTAATAATTCTCTCAGTGGCATGATTCCCCAATGCTTGACTGCAATACGCGATATTAGTGTACTTAACTTAGCGAGAAACAACCTCATTGGAACTATTTCTAATGTTGAAGTTTCTAAAGATAGTTCATTGGAAATTCTAGAGATCGGTAGAAATCGATTTGGTGGCCAGATAGCTTCCCATGTTTTGCGGTCCAACAACTTTTATGGAGGCATTGAATGTCTCAACACCAATGGCACCTGGCCAAGGCTTCAAATCATAGACCTAGCTCACAATAATTTCCGTGGTGAAATACAGGGAATACTTTGGAGAACATGGCATACAATGATGGTTACCGAAGAGGGTTCCCAATTGACAATCAACGGCCACGAGCTTAGAAGGATATCTATAAATCCACTGGACAGAAACAGTGATAGATTGGTGGAGGTTTCTTTGGGCTTTGAGTATGGTATAAGTATTACAGTTACCAACAAAGGTTCAGAGATGAATATGGTAAAGATTCTATGTATCTTCACCTTGATTGACTTCTCATGCAATAATTTCAGTGGTCCAATACCCAAGGAAATGGGAGAATTCAAATTACTATATGCCCTTAATTTGTCCAAAAATGCTTTCACAGGCGAAATCCCATCCTCATTTGGTAACATGAGCGCACTCGAGTGCTTGGACCTGTCACAGAACAAGTTGAGTGGGTACATTCCACCACAGTTGGGAAAGCTTACTTTCCTTTCGTTCTTGAATCTCTCAAACAATCAACTGGTCGGCAGGATCCCAACCAGTACTCAATTTTCAACATTTCCAAAAGCCTCCTTTACAGGTAACAAAGGACTATGGGGGCCTCCTTTGACGGTGGATAACAAAGCAGGATTGTCACCACCACCAACAGTGAATAGAAGGCCTCCAAATTCTGGACATCATCATGAGGTTAATTGGGATCTTATCAGTGTCGAACTTGGATTTACATTTGGCTGTGGAGTTGCCATTGGATCACTTGTGCTGTGCAAGAGATGGAGTAAGTGGTATTACAGAGCTATGTGCAGCATCCTTCTCAAGATATTCCCTCAGCTGGAGGAAAGAATTGGTATTCATCAAAGACATGTTCACATAAATCAAAGGTGGTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

856

Amino Acids

95.37

Weight (kDa)

7.83

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 484
AccB1I GGYRCC 2 cut(s) 484, 1673
AccB7I CCANNNNNTGG 1 cut(s) 2345
AccII CGCG 1 cut(s) 1488
AciI CCGC 2 cut(s) 574, 1627
AclWI GGATC 9 cut(s) 252, 265, 380, 571, 685, 2200, 2213, 2379, 2431
AcoI YGGCCR 3 cut(s) 1603, 1679, 1801
AcsI RAATTY 6 cut(s) 151, 545, 1018, 1572, 2009, 2341
AcuI CTGAAG 3 cut(s) 554, 848, 1229
AfaI GTAC 5 cut(s) 486, 976, 1500, 2132, 2218
AfiI CCNNNNNNNGG 8 cut(s) 254, 395, 902, 1108, 1683, 2147, 2345, 2503
AflIII ACRYGT 1 cut(s) 2533
AjnI CCWGG 5 cut(s) 253, 322, 394, 1107, 1676
AjuI GAANNNNNNNTTGG 2 cut(s) 2033, 2065
AleI CACNNNNGTG 1 cut(s) 2095
AloI GAACNNNNNNTCC 4 cut(s) 365, 397, 1120, 1152
Alw26I GTCTC 4 cut(s) 440, 775, 1664, 2554
AlwI GGATC 9 cut(s) 252, 265, 380, 571, 685, 2200, 2213, 2379, 2431
Ama87I CYCGRG 2 cut(s) 1294, 2093
AoxI GGCC 6 cut(s) 904, 1603, 1679, 1801, 2273, 2333
ApeKI GCWGC 3 cut(s) 13, 1025, 2475
ApoI RAATTY 6 cut(s) 151, 545, 1018, 1572, 2009, 2341
Asp700I GAANNNNTTC 2 cut(s) 861, 1534
Asp718I GGTACC 1 cut(s) 484
AspLEI GCGC 1 cut(s) 2090
AspS9I GGNCC 6 cut(s) 245, 905, 1629, 1985, 2104, 2273
AsuC2I CCSGG 1 cut(s) 136
AsuHPI GGTGA 7 cut(s) 256, 761, 1225, 1343, 1736, 1942, 2301
AsuII TTCGAA 1 cut(s) 302
AvaI CYCGRG 2 cut(s) 1294, 2093
AvaII GGWCC 4 cut(s) 245, 1629, 1985, 2104
AxyI CCTNAGG 1 cut(s) 350
BaeGI GKGCMC 1 cut(s) 207
BalI TGGCCA 2 cut(s) 1605, 1681
BamHI GGATCC 2 cut(s) 257, 2205
BanI GGYRCC 2 cut(s) 484, 1673
BanII GRGCYC 1 cut(s) 1389
BauI CACGAG 1 cut(s) 1805
BbvCI CCTCAGC 1 cut(s) 2499
BbvI GCAGC 2 cut(s) 1012, 2487
BccI CCATC 5 cut(s) 386, 1327, 1759, 2074, 2439
BceAI ACGGC 1 cut(s) 1816
BciT130I CCWGG 5 cut(s) 255, 324, 396, 1109, 1678
BcnI CCSGG 1 cut(s) 136
BcoDI GTCTC 4 cut(s) 440, 775, 1664, 2554
BfaI CTAG 4 cut(s) 195, 230, 1577, 1703
BfmI CTRYAG 2 cut(s) 54, 494
BglII AGATCT 2 cut(s) 474, 652
BisI GCNGC 3 cut(s) 14, 1026, 2476
BlsI GCNGC 3 cut(s) 15, 1027, 2477
BmcAI AGTACT 1 cut(s) 2218
Bme1390I CCNGG 6 cut(s) 136, 255, 324, 396, 1109, 1678
Bme18I GGWCC 4 cut(s) 245, 1629, 1985, 2104
BmeT110I CYCGRG 2 cut(s) 1294, 2093
BmgT120I GGNCC 6 cut(s) 245, 905, 1629, 1985, 2104, 2273
BmrFI CCNGG 6 cut(s) 136, 255, 324, 396, 1109, 1678
BmsI GCATC 2 cut(s) 1406, 2487
BpmI CTGGAG 1 cut(s) 2525
Bpu10I CCTNAGC 2 cut(s) 224, 2499
Bpu14I TTCGAA 1 cut(s) 302
BpuEI CTTGAG 5 cut(s) 316, 385, 451, 1078, 2471
BpuMI CCSGG 1 cut(s) 136
Bsa29I ATCGAT 1 cut(s) 1594
BsaJI CCNNGG 5 cut(s) 1108, 1176, 1682, 1720, 1995
BsaWI WCCGGW 1 cut(s) 242
BsaXI ACNNNNNCTCC 2 cut(s) 365, 395
Bsc4I CCNNNNNNNGG 8 cut(s) 254, 395, 902, 1108, 1683, 2147, 2345, 2503
Bse1I ACTGG 6 cut(s) 67, 679, 1080, 1839, 2199, 2214
Bse21I CCTNAGG 1 cut(s) 350
Bse3DI GCAATG 2 cut(s) 205, 1414
BseBI CCWGG 5 cut(s) 255, 324, 396, 1109, 1678
BseCI ATCGAT 1 cut(s) 1594
BseDI CCNNGG 5 cut(s) 1108, 1176, 1682, 1720, 1995
BseGI GGATG 3 cut(s) 1104, 2066, 2478
BseLI CCNNNNNNNGG 8 cut(s) 254, 395, 902, 1108, 1683, 2147, 2345, 2503
BseMI GCAATG 2 cut(s) 205, 1414
BseMII CTCAG 5 cut(s) 272, 451, 950, 1465, 2513
BseNI ACTGG 6 cut(s) 67, 679, 1080, 1839, 2199, 2214
BseRI GAGGAG 2 cut(s) 20, 38
BseSI GKGCMC 1 cut(s) 207
BseXI GCAGC 2 cut(s) 1012, 2487
BsgI GTGCAG 1 cut(s) 2494
Bsh1236I CGCG 1 cut(s) 1488
BshFI GGCC 6 cut(s) 906, 1605, 1681, 1803, 2275, 2335
BshNI GGYRCC 2 cut(s) 484, 1673
BshVI ATCGAT 1 cut(s) 1594
BsiHKCI CYCGRG 2 cut(s) 1294, 2093
BsiSI CCGG 2 cut(s) 136, 243
BslFI GGGAC 1 cut(s) 1263
BslI CCNNNNNNNGG 8 cut(s) 254, 395, 902, 1108, 1683, 2147, 2345, 2503
BsmAI GTCTC 4 cut(s) 440, 775, 1664, 2554
BsmBI CGTCTC 1 cut(s) 2554
BsmFI GGGAC 1 cut(s) 1263
BsnI GGCC 6 cut(s) 906, 1605, 1681, 1803, 2275, 2335
BsoBI CYCGRG 2 cut(s) 1294, 2093
Bsp119I TTCGAA 1 cut(s) 302
Bsp1286I GDGCHC 2 cut(s) 207, 1389
BspACI CCGC 2 cut(s) 574, 1627
BspANI GGCC 6 cut(s) 906, 1605, 1681, 1803, 2275, 2335
BspCNI CTCAG 5 cut(s) 273, 450, 951, 1464, 2512
BspDI ATCGAT 1 cut(s) 1594
BspFNI CGCG 1 cut(s) 1488
BspHI TCATGA 1 cut(s) 2356
BspMAI CTGCAG 1 cut(s) 58
BspPI GGATC 9 cut(s) 252, 265, 380, 571, 685, 2200, 2213, 2379, 2431
BspT104I TTCGAA 1 cut(s) 302
BspT107I GGYRCC 2 cut(s) 484, 1673
BsrDI GCAATG 2 cut(s) 205, 1414
BsrI ACTGG 6 cut(s) 67, 679, 1080, 1839, 2199, 2214
BssECI CCNNGG 5 cut(s) 1108, 1176, 1682, 1720, 1995
BssSI CACGAG 1 cut(s) 1805
BssT1I CCWWGG 3 cut(s) 1176, 1682, 1995
Bst2BI CACGAG 1 cut(s) 1805
Bst2UI CCWGG 5 cut(s) 255, 324, 396, 1109, 1678
Bst4CI ACNGT 8 cut(s) 167, 1213, 1353, 1847, 1900, 2145, 2287, 2323
Bst6I CTCTTC 4 cut(s) 573, 708, 778, 1770
BstBI TTCGAA 1 cut(s) 302
BstC8I GCNNGC 1 cut(s) 956
BstDSI CCRYGG 1 cut(s) 1720
BstEII GGTNACC 1 cut(s) 1768
BstENI CCTNNNNNAGG 1 cut(s) 1681
BstF5I GGATG 3 cut(s) 1104, 2066, 2478
BstFNI CGCG 1 cut(s) 1488
BstHHI GCGC 1 cut(s) 2090
BstMAI GTCTC 4 cut(s) 440, 775, 1664, 2554
BstNI CCWGG 5 cut(s) 255, 324, 396, 1109, 1678
BstNSI RCATGY 1 cut(s) 2537
BstPI GGTNACC 1 cut(s) 1768
BstSCI CCNGG 6 cut(s) 134, 253, 322, 394, 1107, 1676
BstSFI CTRYAG 2 cut(s) 54, 494
BstSLI GKGCMC 1 cut(s) 207
BstUI CGCG 1 cut(s) 1488
BstV1I GCAGC 2 cut(s) 1012, 2487
BstX2I RGATCY 6 cut(s) 257, 474, 563, 652, 2205, 2371
BstXI CCANNNNNNTGG 2 cut(s) 1285, 2002
BstYI RGATCY 6 cut(s) 257, 474, 563, 652, 2205, 2371
Bsu15I ATCGAT 1 cut(s) 1594
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 6 cut(s) 906, 1605, 1681, 1803, 2275, 2335
BsuTUI ATCGAT 1 cut(s) 1594
BtgI CCRYGG 1 cut(s) 1720
BtsCI GGATG 3 cut(s) 1104, 2066, 2478
BtsI GCAGTG 1 cut(s) 608
Cac8I GCNNGC 1 cut(s) 956
CciI TCATGA 1 cut(s) 2356
CfoI GCGC 1 cut(s) 2090
Cfr13I GGNCC 6 cut(s) 245, 905, 1629, 1985, 2104, 2273
ClaI ATCGAT 1 cut(s) 1594
Csp6I GTAC 5 cut(s) 485, 975, 1499, 2131, 2217
CspCI CAANNNNNGTGG 5 cut(s) 2107, 2127, 2142, 2162, 2537
CviAII CATG 9 cut(s) 142, 1382, 1459, 1619, 1752, 1968, 2083, 2357, 2534
CviQI GTAC 5 cut(s) 485, 975, 1499, 2131, 2217
DraI TTTAAA 1 cut(s) 523
EaeI YGGCCR 3 cut(s) 1603, 1679, 1801
Eam1104I CTCTTC 4 cut(s) 573, 708, 778, 1770
EarI CTCTTC 4 cut(s) 573, 708, 778, 1770
Eco130I CCWWGG 3 cut(s) 1176, 1682, 1995
Eco147I AGGCCT 1 cut(s) 2335
Eco24I GRGCYC 1 cut(s) 1389
Eco32I GATATC 1 cut(s) 1821
Eco47I GGWCC 4 cut(s) 245, 1629, 1985, 2104
Eco57I CTGAAG 3 cut(s) 554, 848, 1229
Eco81I CCTNAGG 1 cut(s) 350
Eco88I CYCGRG 2 cut(s) 1294, 2093
Eco91I GGTNACC 1 cut(s) 1768
EcoNI CCTNNNNNAGG 1 cut(s) 1681
EcoO109I RGGNCCY 1 cut(s) 2273
EcoO65I GGTNACC 1 cut(s) 1768
EcoRI GAATTC 2 cut(s) 151, 2009
EcoRII CCWGG 5 cut(s) 253, 322, 394, 1107, 1676
EcoRV GATATC 1 cut(s) 1821
EcoT14I CCWWGG 3 cut(s) 1176, 1682, 1995
EcoT38I GRGCYC 1 cut(s) 1389
ErhI CCWWGG 3 cut(s) 1176, 1682, 1995
Esp3I CGTCTC 1 cut(s) 2554
FaeI CATG 9 cut(s) 145, 1385, 1462, 1622, 1755, 1971, 2086, 2360, 2537
FaqI GGGAC 1 cut(s) 1263
FatI CATG 9 cut(s) 141, 1381, 1458, 1618, 1751, 1967, 2082, 2356, 2533
Fnu4HI GCNGC 3 cut(s) 14, 1026, 2476
FokI GGATG 3 cut(s) 1091, 2053, 2465
FriOI GRGCYC 1 cut(s) 1389
Fsp4HI GCNGC 3 cut(s) 14, 1026, 2476
FspBI CTAG 4 cut(s) 195, 230, 1577, 1703
GlaI GCGC 1 cut(s) 2089
GluI GCNGC 3 cut(s) 14, 1026, 2476
GsuI CTGGAG 1 cut(s) 2525
HaeIII GGCC 6 cut(s) 906, 1605, 1681, 1803, 2275, 2335
HapII CCGG 2 cut(s) 136, 243
HhaI GCGC 1 cut(s) 2090
Hin1II CATG 9 cut(s) 145, 1385, 1462, 1622, 1755, 1971, 2086, 2360, 2537
Hin6I GCGC 1 cut(s) 2088
HinP1I GCGC 1 cut(s) 2088
HincII GTYRAC 3 cut(s) 423, 787, 1225
HindII GTYRAC 3 cut(s) 423, 787, 1225
HindIII AAGCTT 2 cut(s) 799, 2153
HpaI GTTAAC 1 cut(s) 787
HpaII CCGG 2 cut(s) 136, 243
HphI GGTGA 7 cut(s) 256, 761, 1225, 1343, 1736, 1942, 2301
Hpy166II GTNNAC 7 cut(s) 61, 423, 752, 787, 1225, 1499, 2539
Hpy188I TCNGA 5 cut(s) 385, 718, 1096, 1425, 1918
Hpy8I GTNNAC 7 cut(s) 61, 423, 752, 787, 1225, 1499, 2539
Hpy99I CGWCG 1 cut(s) 691
HpyAV CCTTC 8 cut(s) 125, 141, 271, 809, 1238, 1809, 2325, 2492
HpyCH4III ACNGT 8 cut(s) 167, 1213, 1353, 1847, 1900, 2145, 2287, 2323
HpyCH4IV ACGT 2 cut(s) 207, 2563
HpySE526I ACGT 2 cut(s) 207, 2563
Hsp92II CATG 9 cut(s) 145, 1385, 1462, 1622, 1755, 1971, 2086, 2360, 2537
HspAI GCGC 1 cut(s) 2088
KpnI GGTACC 1 cut(s) 488
KspAI GTTAAC 1 cut(s) 787
Lsp1109I GCAGC 2 cut(s) 1012, 2487
LweI GCATC 2 cut(s) 1406, 2487
MaeI CTAG 4 cut(s) 195, 230, 1577, 1703
MaeII ACGT 2 cut(s) 207, 2563
MboII GAAGA 8 cut(s) 118, 560, 695, 765, 864, 1348, 1787, 1939
MfeI CAATTG 3 cut(s) 449, 621, 1787
MflI RGATCY 6 cut(s) 257, 474, 563, 652, 2205, 2371
MhlI GDGCHC 2 cut(s) 207, 1389
MlsI TGGCCA 2 cut(s) 1605, 1681
MluNI TGGCCA 2 cut(s) 1605, 1681
MlyI GAGTC 1 cut(s) 442
MmeI TCCRAC 6 cut(s) 270, 339, 350, 801, 900, 1656
Mox20I TGGCCA 2 cut(s) 1605, 1681
MroXI GAANNNNTTC 2 cut(s) 861, 1534
MscI TGGCCA 2 cut(s) 1605, 1681
MseI TTAA 8 cut(s) 75, 522, 786, 797, 840, 1503, 2031, 2364
MslI CAYNNNNRTG 3 cut(s) 1402, 2095, 2355
Msp20I TGGCCA 2 cut(s) 1605, 1681
MspA1I CMGCKG 2 cut(s) 574, 2503
MspI CCGG 2 cut(s) 136, 243
MspR9I CCNGG 6 cut(s) 136, 255, 324, 396, 1109, 1678
MunI CAATTG 3 cut(s) 449, 621, 1787
MvaI CCWGG 5 cut(s) 255, 324, 396, 1109, 1678
MvnI CGCG 1 cut(s) 1488
NciI CCSGG 1 cut(s) 136
NlaIII CATG 9 cut(s) 145, 1385, 1462, 1622, 1755, 1971, 2086, 2360, 2537
NmuCI GTSAC 4 cut(s) 606, 690, 2109, 2307
NspI RCATGY 1 cut(s) 2537
NspV TTCGAA 1 cut(s) 302
OliI CACNNNNGTG 1 cut(s) 2095
PaeR7I CTCGAG 2 cut(s) 1294, 2093
PagI TCATGA 1 cut(s) 2356
PceI AGGCCT 1 cut(s) 2335
PciI ACATGT 1 cut(s) 2533
PdmI GAANNNNTTC 2 cut(s) 861, 1534
PflMI CCANNNNNTGG 1 cut(s) 2345
PfoI TCCNGGA 2 cut(s) 253, 394
PkrI GCNGC 3 cut(s) 15, 1027, 2477
PleI GAGTC 1 cut(s) 441
PpsI GAGTC 1 cut(s) 441
PscI ACATGT 1 cut(s) 2533
Psp6I CCWGG 5 cut(s) 253, 322, 394, 1107, 1676
PspEI GGTNACC 1 cut(s) 1768
PspGI CCWGG 5 cut(s) 253, 322, 394, 1107, 1676
PspPI GGNCC 6 cut(s) 245, 905, 1629, 1985, 2104, 2273
PspXI VCTCGAGB 1 cut(s) 2093
PsrI GAACNNNNNNTAC 2 cut(s) 1741, 1773
PstI CTGCAG 1 cut(s) 58
PsuI RGATCY 6 cut(s) 257, 474, 563, 652, 2205, 2371
PvuII CAGCTG 1 cut(s) 2503
RsaI GTAC 5 cut(s) 486, 976, 1500, 2132, 2218
RsaNI GTAC 5 cut(s) 485, 975, 1499, 2131, 2217
RseI CAYNNNNRTG 3 cut(s) 1402, 2095, 2355
SaqAI TTAA 8 cut(s) 75, 522, 786, 797, 840, 1503, 2031, 2364
SatI GCNGC 3 cut(s) 14, 1026, 2476
Sau96I GGNCC 6 cut(s) 245, 905, 1629, 1985, 2104, 2273
ScaI AGTACT 1 cut(s) 2218
SchI GAGTC 1 cut(s) 442
ScrFI CCNGG 6 cut(s) 136, 255, 324, 396, 1109, 1678
SduI GDGCHC 2 cut(s) 207, 1389
SfaNI GCATC 2 cut(s) 1406, 2487
SfcI CTRYAG 2 cut(s) 54, 494
Sfr274I CTCGAG 2 cut(s) 1294, 2093
SfuI TTCGAA 1 cut(s) 302
SinI GGWCC 4 cut(s) 245, 1629, 1985, 2104
SlaI CTCGAG 2 cut(s) 1294, 2093
SmiMI CAYNNNNRTG 3 cut(s) 1402, 2095, 2355
SmlI CTYRAG 7 cut(s) 295, 364, 430, 1057, 1294, 2093, 2486
SmoI CTYRAG 7 cut(s) 295, 364, 430, 1057, 1294, 2093, 2486
SseBI AGGCCT 1 cut(s) 2335
SsiI CCGC 2 cut(s) 574, 1627
SspI AATATT 2 cut(s) 1327, 1420
SspMI CTAG 4 cut(s) 195, 230, 1577, 1703
StuI AGGCCT 1 cut(s) 2335
StyD4I CCNGG 6 cut(s) 134, 253, 322, 394, 1107, 1676
StyI CCWWGG 3 cut(s) 1176, 1682, 1995
TaaI ACNGT 8 cut(s) 167, 1213, 1353, 1847, 1900, 2145, 2287, 2323
TaiI ACGT 2 cut(s) 210, 2566
TaqI TCGA 7 cut(s) 302, 936, 1295, 1367, 1594, 2094, 2385
TatI WGTACW 2 cut(s) 1498, 2216
Tru1I TTAA 8 cut(s) 75, 522, 786, 797, 840, 1503, 2031, 2364
Tru9I TTAA 8 cut(s) 75, 522, 786, 797, 840, 1503, 2031, 2364
TseFI GTSAC 4 cut(s) 606, 690, 2109, 2307
TseI GCWGC 3 cut(s) 13, 1025, 2475
Tsp45I GTSAC 4 cut(s) 606, 690, 2109, 2307
TspDTI ATGAA 6 cut(s) 17, 1002, 1220, 1554, 1937, 2513
TspGWI ACGGA 3 cut(s) 885, 992, 1709
Van91I CCANNNNNTGG 1 cut(s) 2345
VpaK11BI GGWCC 4 cut(s) 245, 1629, 1985, 2104
XagI CCTNNNNNAGG 1 cut(s) 1681
XapI RAATTY 6 cut(s) 151, 545, 1018, 1572, 2009, 2341
XbaI TCTAGA 1 cut(s) 1576
XceI RCATGY 1 cut(s) 2537
XhoI CTCGAG 2 cut(s) 1294, 2093
XmnI GAANNNNTTC 2 cut(s) 861, 1534
XspI CTAG 4 cut(s) 195, 230, 1577, 1703
ZrmI AGTACT 1 cut(s) 2218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.