Rmu_sc0001207.1_g000038

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001207.1
OG0000047
Physical Location & Seq
Forward (+)
134517 .. 137654
3138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001207.1_g000038.1.cds

Sequence Viewer

Length: 3138 bp
atgaaaactttcctacatttcttccttttcttgatcacactctgggtcagtatcatcattccagcagttcactgccagtgtattaaagaccagcaactatcactgctccaattcaagaaaagcctcgtgatcgatccttctttcaatcattccaccaagcttatttcttggaatgcaagtactgattgttgttcttgggtcggcgtcacttgcagccgtaatgggcgtgttctgggtcttgacttaagcagccaacagatctattatggaattgacaattccagcagtctcttccatcttcgttatcttcaaagcctcaatctggcggacaaccaacttggcgttgggcaatcaataccatccgcgatcggaaatctcctgaacttgaggtatctgaatttatctattaatgattattcaggggaaattcccatcgagatttcacgcttgaggagattggtagttcttgatttttctaattattatcaggccgactttaaacttggatgtccaaatttacacatgttggttcaaaatttcagagagcttagagagttatatcttgataatgtccaaatatcagaacagaggagtgaatggtgccgagccgtatcatcttcccttcccaacctcagggtcttgagcatgtcccattgtgatctctcaagcccttttcacgagtcccttgctaagcttcggtctctatccgtgattaggttggacaggaacaatatctctgcgccagatccaggattctttgccaacttttcaaaattgactgtcttgagtctcgcattctgcgacttgcctggaacttttcccaaagagatctttcagttaccttctctacaaattattgacctttcatataattaccaacttgatggttctttgccagaatttccaagcaatggatctcttcagtacctggatctaagcatgacaaatttttcagggttattaccaaattctattggcaacctcaaaatgctgtccaccgtacatattcaagaatgcaatttcagcggaccgatcccacagtcaatgacaaaccttacacacttagtttctttgtcgatgtatgataacaatttggaaggttcaattccgtcattcagtggggccaagaaagttgtcaacatagacctttccaacaatagtctgacaggtactattaattccacctactggagaaaccttactcagttatctcatctcagtttgggatccaataagctcgatgggaatatcccagcatctctgttttctcttccccttttgtctttcctagttctttccaagaatcaattctctggtccattccctgaaatttcaaatgtgtcttcctacttgccgaatagtcttaccattctagatctttcttcaaataatataagtggttcgtttcctcttgactatctaaaccaacagataaatctttatgaacttgatctttcacacaataacttctttcttacccatgattataccaatttctcatattcctcattttctcaactaacttttttgaggttggcttcattgaagttgagaacaattcctaatttcttcagaaatcaatctaacttgtttagtttggacctttcagataaccatataagtggcaagatacccaactggatttggagttttaaagagctcgaagtcctaaatctttcttgcaactccctagattctctagaatctacttcattcaaccttactagtctatcttacctggaccttcattccaaccagcttcatgggcaagtcccaattttttcatcaccttatcgtgtgattcgtgtcaattatctagatatgtcaaggaatttttacagctctatcataccgagtacctttggagatgtatattttttcattaaattcttgtcgctttcgagcaataacctcaaagggatcattccagagtcattatgcaatatgcaatatctcagaattcttgatctgtccaataattctttgagtggcacgattccccagtgtttagctacaatgaagatgcttgaagtactcaatgtaaggagaaacaatcttacatatgttaataaattctctcagaattgcagtctaaaaactctggacatcagtggaaatcagattcaaggccagtttctaaaatctctggtcaactgcacccagttagaggttttaaaccttggaaacaatgtaatagcagaaccatttccatgctatttaaggaacacatccaccttgcgtgtccttgtcttgcgatccaataaattttatggccgcattggatgtcgcaagactaatggcacttggccagtacttcagatcatagatctagctcacaacaatttcagtggtgatgtacctggaacagctttgacaacttggcaggccatgaggactaacaaagataatgtctcatcgaagctcaataaccttcaatttgaggatgggcaagcttattatcaagaagatacgatcacagttaccaacaaaggtttagacatagagttggtgaatattttaactatcttcatctcaattgacttctcatgcaacaggttgaacggatcaataccagaggaaattggagaactcaaatcattatattccctcaacttgtccaacaatgctttcactggtgaagttccatcatcactaagtgacttgagtcagctagagtctttggacctctccaataacaaactgagcggccaaatcccaccggagcttaccaaactcactttccttgcattcttgaatctttcatataatcaattggtcgggaggataccaagcggtgctcaattttcaacatttgatgcagcttccttcaaaggtaacaaaggattatgggggcctcctttaacagcagataataacacagggttctcaccaccaaagccggaaggaaaccattcaaatcctggacatgagattgattgggatattatctgtcctgaaattggatttacatgtgggtttggcatcatcaccgggtcacttttgttttgcgagagatggaggaaatggtattatagagctatgtataacatgcttctaaagatatttcctcagctagaacaaagatttggtcatcacaggagacatgtttatgtacatcaaagatactggagacgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1045

Amino Acids

117.95

Weight (kDa)

7.05

Isoelectric Point (pI)

38.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 600
AccB7I CCANNNNNTGG 2 cut(s) 911, 1188
AccBSI CCGCTC 1 cut(s) 2706
AccII CGCG 1 cut(s) 365
AciI CCGC 6 cut(s) 326, 363, 1026, 2275, 2706, 2793
AcoI YGGCCR 3 cut(s) 2272, 2306, 2707
AcuI CTGAAG 3 cut(s) 905, 1555, 2300
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 2657
AfaI GTAC 9 cut(s) 181, 926, 1002, 1171, 1858, 2034, 2313, 2358, 3114
AfiI CCNNNNNNNGG 8 cut(s) 322, 633, 714, 749, 911, 1188, 2167, 2960
AflII CTTAAG 1 cut(s) 244
AflIII ACRYGT 3 cut(s) 522, 2969, 3103
AhlI ACTAGT 1 cut(s) 1724
AjnI CCWGG 6 cut(s) 748, 808, 927, 1737, 2359, 2920
AjuI GAANNNNNNNTTGG 8 cut(s) 1292, 1324, 2612, 2644, 2723, 2755, 3069, 3101
Alw21I GWGCWC 2 cut(s) 1662, 2800
Alw26I GTCTC 6 cut(s) 293, 705, 794, 2416, 3094, 3124
AlwNI CAGNNNCTG 1 cut(s) 928
AoxI GGCC 8 cut(s) 489, 1122, 2128, 2272, 2306, 2385, 2707, 2852
ApeKI GCWGC 3 cut(s) 213, 249, 2819
ArsI GACNNNNNNTTYG 4 cut(s) 2394, 2426, 3073, 3105
AseI ATTAAT 2 cut(s) 408, 1176
Asp700I GAANNNNTTC 4 cut(s) 8, 1307, 2205, 2911
AspLEI GCGC 1 cut(s) 742
AspS9I GGNCC 7 cut(s) 1028, 1122, 1316, 1600, 1741, 2683, 2852
AsuC2I CCSGG 1 cut(s) 2992
AsuHPI GGTGA 6 cut(s) 1779, 2363, 2521, 2648, 2880, 2980
AvaII GGWCC 5 cut(s) 1028, 1316, 1600, 1741, 2683
AxyI CCTNAGG 1 cut(s) 632
BalI TGGCCA 1 cut(s) 2308
BamHI GGATCC 1 cut(s) 1226
BanI GGYRCC 1 cut(s) 600
BanII GRGCYC 1 cut(s) 1662
BauI CACGAG 2 cut(s) 125, 677
BbsI GAAGAC 1 cut(s) 1335
Bbv12I GWGCWC 2 cut(s) 1662, 2800
BbvCI CCTCAGC 1 cut(s) 3069
BbvI GCAGC 3 cut(s) 225, 261, 2831
BccI CCATC 8 cut(s) 303, 367, 440, 878, 1235, 2438, 2653, 3009
BceAI ACGGC 2 cut(s) 201, 593
BcgI CGANNNNNNTGC 2 cut(s) 668, 702
BciT130I CCWGG 6 cut(s) 750, 810, 929, 1739, 2361, 2922
BciVI GTATCC 1 cut(s) 2778
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 1 cut(s) 2992
BcoDI GTCTC 6 cut(s) 293, 705, 794, 2416, 3094, 3124
BcuI ACTAGT 1 cut(s) 1724
BfaI CTAG 9 cut(s) 1289, 1373, 1691, 1700, 1725, 1817, 2330, 2672, 3074
BfrI CTTAAG 1 cut(s) 244
BfuI GTATCC 1 cut(s) 2778
BglII AGATCT 4 cut(s) 258, 828, 1375, 2326
BisI GCNGC 5 cut(s) 214, 250, 2275, 2707, 2820
BlpI GCTNAGC 1 cut(s) 690
BlsI GCNGC 5 cut(s) 215, 251, 2276, 2708, 2821
BmcAI AGTACT 3 cut(s) 181, 2034, 2313
Bme1390I CCNGG 7 cut(s) 750, 810, 929, 1739, 2361, 2922, 2992
Bme18I GGWCC 5 cut(s) 1028, 1316, 1600, 1741, 2683
BmgT120I GGNCC 7 cut(s) 1028, 1122, 1316, 1600, 1741, 2683, 2852
BmiI GGNNCC 4 cut(s) 602, 1123, 1228, 2853
BmrFI CCNGG 7 cut(s) 750, 810, 929, 1739, 2361, 2922, 2992
BmrI ACTGGG 2 cut(s) 1996, 2155
BmsI GCATC 4 cut(s) 1265, 2013, 2806, 2991
BmuI ACTGGG 2 cut(s) 1996, 2155
BoxI GACNNNNGTC 1 cut(s) 2664
BpiI GAAGAC 1 cut(s) 1335
BpmI CTGGAG 1 cut(s) 1210
Bpu10I CCTNAGC 1 cut(s) 3069
Bpu1102I GCTNAGC 1 cut(s) 690
BpuEI CTTGAG 6 cut(s) 406, 469, 649, 661, 805, 2683
BpuMI CCSGG 1 cut(s) 2992
Bsa29I ATCGAT 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 705
BsaJI CCNNGG 1 cut(s) 2179
BsaWI WCCGGW 1 cut(s) 2719
Bsc4I CCNNNNNNNGG 8 cut(s) 322, 633, 714, 749, 911, 1188, 2167, 2960
Bse1I ACTGG 9 cut(s) 76, 1193, 1643, 2002, 2131, 2161, 2309, 2638, 3131
Bse21I CCTNAGG 1 cut(s) 632
Bse3DI GCAATG 1 cut(s) 916
BseBI CCWGG 6 cut(s) 750, 810, 929, 1739, 2361, 2922
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 1 cut(s) 2179
BseGI GGATG 5 cut(s) 359, 512, 2228, 2288, 2449
BseLI CCNNNNNNNGG 8 cut(s) 322, 633, 714, 749, 911, 1188, 2167, 2960
BseMI GCAATG 1 cut(s) 916
BseMII CTCAG 7 cut(s) 646, 1217, 1231, 1969, 2093, 2693, 3083
BseNI ACTGG 9 cut(s) 76, 1193, 1643, 2002, 2131, 2161, 2309, 2638, 3131
BseRI GAGGAG 2 cut(s) 466, 604
BseXI GCAGC 3 cut(s) 225, 261, 2831
BseYI CCCAGC 1 cut(s) 1252
BsgI GTGCAG 1 cut(s) 2140
Bsh1236I CGCG 1 cut(s) 365
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 8 cut(s) 491, 1124, 2130, 2274, 2308, 2387, 2709, 2854
BshNI GGYRCC 1 cut(s) 600
BshVI ATCGAT 1 cut(s) 132
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 2 cut(s) 1662, 2800
BsiSI CCGG 3 cut(s) 2720, 2900, 2991
BslFI GGGAC 3 cut(s) 634, 667, 1757
BslI CCNNNNNNNGG 8 cut(s) 322, 633, 714, 749, 911, 1188, 2167, 2960
BsmAI GTCTC 6 cut(s) 293, 705, 794, 2416, 3094, 3124
BsmBI CGTCTC 1 cut(s) 3124
BsmFI GGGAC 3 cut(s) 634, 667, 1757
BsmI GAATGC 4 cut(s) 178, 794, 1019, 2747
BsnI GGCC 8 cut(s) 491, 1124, 2130, 2274, 2308, 2387, 2709, 2854
Bso31I GGTCTC 1 cut(s) 705
Bsp1286I GDGCHC 2 cut(s) 1662, 2800
Bsp1407I TGTACA 1 cut(s) 3112
Bsp1720I GCTNAGC 1 cut(s) 690
BspACI CCGC 6 cut(s) 326, 363, 1026, 2275, 2706, 2793
BspANI GGCC 8 cut(s) 491, 1124, 2130, 2274, 2308, 2387, 2709, 2854
BspCNI CTCAG 7 cut(s) 645, 1216, 1230, 1968, 2092, 2694, 3082
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 1 cut(s) 365
BspLI GGNNCC 4 cut(s) 602, 1123, 1228, 2853
BspT107I GGYRCC 1 cut(s) 600
BspTI CTTAAG 1 cut(s) 244
BspTNI GGTCTC 1 cut(s) 705
BsrBI CCGCTC 1 cut(s) 2706
BsrDI GCAATG 1 cut(s) 916
BsrGI TGTACA 1 cut(s) 3112
BsrI ACTGG 9 cut(s) 76, 1193, 1643, 2002, 2131, 2161, 2309, 2638, 3131
BssECI CCNNGG 1 cut(s) 2179
BssNI GRCGYC 1 cut(s) 204
BssSI CACGAG 2 cut(s) 125, 677
BssT1I CCWWGG 1 cut(s) 2179
Bst2BI CACGAG 2 cut(s) 125, 677
Bst2UI CCWGG 6 cut(s) 750, 810, 929, 1739, 2361, 2922
Bst4CI ACNGT 4 cut(s) 781, 1000, 1041, 2479
Bst6I CTCTTC 3 cut(s) 296, 924, 1275
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 244
BstAUI TGTACA 1 cut(s) 3112
BstC8I GCNNGC 2 cut(s) 2385, 2451
BstF5I GGATG 5 cut(s) 359, 512, 2228, 2288, 2449
BstFNI CGCG 1 cut(s) 365
BstHHI GCGC 1 cut(s) 742
BstMAI GTCTC 6 cut(s) 293, 705, 794, 2416, 3094, 3124
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 3 cut(s) 210, 1023, 1765
BstNI CCWGG 6 cut(s) 750, 810, 929, 1739, 2361, 2922
BstNSI RCATGY 5 cut(s) 526, 649, 2973, 3052, 3107
BstPAI GACNNNNGTC 1 cut(s) 2664
BstSCI CCNGG 7 cut(s) 748, 808, 927, 1737, 2359, 2920, 2990
BstUI CGCG 1 cut(s) 365
BstV1I GCAGC 3 cut(s) 225, 261, 2831
BstV2I GAAGAC 1 cut(s) 1335
BstX2I RGATCY 8 cut(s) 258, 745, 828, 914, 931, 1226, 1375, 2326
BstXI CCANNNNNNTGG 3 cut(s) 884, 1622, 1763
BstYI RGATCY 8 cut(s) 258, 745, 828, 914, 931, 1226, 1375, 2326
Bsu15I ATCGAT 1 cut(s) 132
Bsu36I CCTNAGG 1 cut(s) 632
BsuI GTATCC 1 cut(s) 2778
BsuRI GGCC 8 cut(s) 491, 1124, 2130, 2274, 2308, 2387, 2709, 2854
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 5 cut(s) 359, 512, 2228, 2288, 2449
BtsI GCAGTG 2 cut(s) 70, 101
BtsIMutI CAGTG 8 cut(s) 70, 83, 101, 1123, 2009, 2116, 2353, 2631
Cac8I GCNNGC 2 cut(s) 2385, 2451
CaiI CAGNNNCTG 1 cut(s) 928
CfoI GCGC 1 cut(s) 742
Cfr13I GGNCC 7 cut(s) 1028, 1122, 1316, 1600, 1741, 2683, 2852
ClaI ATCGAT 1 cut(s) 132
CpoI CGGWCCG 1 cut(s) 1028
CseI GACGC 1 cut(s) 193
Csp6I GTAC 9 cut(s) 180, 925, 1001, 1170, 1857, 2033, 2312, 2357, 3113
CspCI CAANNNNNGTGG 2 cut(s) 2329, 2364
CspI CGGWCCG 1 cut(s) 1028
CviQI GTAC 9 cut(s) 180, 925, 1001, 1170, 1857, 2033, 2312, 2357, 3113
DraI TTTAAA 3 cut(s) 499, 1654, 2175
DraIII CACNNNGTG 1 cut(s) 2657
EaeI YGGCCR 3 cut(s) 2272, 2306, 2707
Eam1104I CTCTTC 3 cut(s) 296, 924, 1275
EarI CTCTTC 3 cut(s) 296, 924, 1275
EciI GGCGGA 1 cut(s) 341
Ecl136II GAGCTC 1 cut(s) 1660
Eco130I CCWWGG 1 cut(s) 2179
Eco24I GRGCYC 1 cut(s) 1662
Eco31I GGTCTC 1 cut(s) 705
Eco47I GGWCC 5 cut(s) 1028, 1316, 1600, 1741, 2683
Eco53kI GAGCTC 1 cut(s) 1660
Eco57I CTGAAG 3 cut(s) 905, 1555, 2300
Eco81I CCTNAGG 1 cut(s) 632
EcoICRI GAGCTC 1 cut(s) 1660
EcoO109I RGGNCCY 1 cut(s) 2852
EcoRI GAATTC 1 cut(s) 1959
EcoRII CCWGG 6 cut(s) 748, 808, 927, 1737, 2359, 2920
EcoT14I CCWWGG 1 cut(s) 2179
EcoT38I GRGCYC 1 cut(s) 1662
ErhI CCWWGG 1 cut(s) 2179
Esp3I CGTCTC 1 cut(s) 3124
FaqI GGGAC 3 cut(s) 634, 667, 1757
FauNDI CATATG 1 cut(s) 2062
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 5 cut(s) 214, 250, 2275, 2707, 2820
FokI GGATG 5 cut(s) 346, 519, 2215, 2295, 2456
FriOI GRGCYC 1 cut(s) 1662
Fsp4HI GCNGC 5 cut(s) 214, 250, 2275, 2707, 2820
FspBI CTAG 9 cut(s) 1289, 1373, 1691, 1700, 1725, 1817, 2330, 2672, 3074
GlaI GCGC 1 cut(s) 741
GluI GCNGC 5 cut(s) 214, 250, 2275, 2707, 2820
GsaI CCCAGC 1 cut(s) 1256
GsuI CTGGAG 1 cut(s) 1210
HaeIII GGCC 8 cut(s) 491, 1124, 2130, 2274, 2308, 2387, 2709, 2854
HapII CCGG 3 cut(s) 2720, 2900, 2991
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 742
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 1 cut(s) 740
HinP1I GCGC 1 cut(s) 740
HincII GTYRAC 2 cut(s) 1138, 2152
HindII GTYRAC 2 cut(s) 1138, 2152
HindIII AAGCTT 3 cut(s) 158, 692, 2451
HpaII CCGG 3 cut(s) 2720, 2900, 2991
HphI GGTGA 6 cut(s) 1779, 2363, 2521, 2648, 2880, 2980
Hpy166II GTNNAC 4 cut(s) 70, 996, 1138, 2152
Hpy8I GTNNAC 4 cut(s) 70, 996, 1138, 2152
HpyAV CCTTC 8 cut(s) 147, 632, 852, 1091, 1754, 2441, 2836, 2897
HpyCH4III ACNGT 4 cut(s) 781, 1000, 1041, 2479
HpyCH4IV ACGT 1 cut(s) 3133
HpyF10VI GCNNNNNNNGC 3 cut(s) 210, 1023, 1765
HpySE526I ACGT 1 cut(s) 3133
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 1 cut(s) 740
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 2 cut(s) 111, 2722
Lsp1109I GCAGC 3 cut(s) 225, 261, 2831
LweI GCATC 4 cut(s) 1265, 2013, 2806, 2991
MaeI CTAG 9 cut(s) 1289, 1373, 1691, 1700, 1725, 1817, 2330, 2672, 3074
MaeII ACGT 1 cut(s) 3133
MaeIII GTNAC 6 cut(s) 205, 837, 2479, 2657, 2834, 2994
MbiI CCGCTC 1 cut(s) 2706
MfeI CAATTG 2 cut(s) 2535, 2771
MflI RGATCY 8 cut(s) 258, 745, 828, 914, 931, 1226, 1375, 2326
MhlI GDGCHC 2 cut(s) 1662, 2800
MlsI TGGCCA 1 cut(s) 2308
MluNI TGGCCA 1 cut(s) 2308
MlyI GAGTC 5 cut(s) 689, 796, 1940, 2674, 2684
MmeI TCCRAC 4 cut(s) 699, 1176, 1776, 2643
Mox20I TGGCCA 1 cut(s) 2308
MroXI GAANNNNTTC 4 cut(s) 8, 1307, 2205, 2911
MscI TGGCCA 1 cut(s) 2308
MslI CAYNNNNRTG 3 cut(s) 1620, 2209, 3108
Msp20I TGGCCA 1 cut(s) 2308
MspA1I CMGCKG 1 cut(s) 1026
MspCI CTTAAG 1 cut(s) 244
MspI CCGG 3 cut(s) 2720, 2900, 2991
MspR9I CCNGG 7 cut(s) 750, 810, 929, 1739, 2361, 2922, 2992
MunI CAATTG 2 cut(s) 2535, 2771
Mva1269I GAATGC 4 cut(s) 178, 794, 1019, 2747
MvaI CCWGG 6 cut(s) 750, 810, 929, 1739, 2361, 2922
MvnI CGCG 1 cut(s) 365
MwoI GCNNNNNNNGC 3 cut(s) 210, 1023, 1765
NciI CCSGG 1 cut(s) 2992
NdeI CATATG 1 cut(s) 2062
NlaIV GGNNCC 4 cut(s) 602, 1123, 1228, 2853
NmeAIII GCCGAG 1 cut(s) 629
NmuCI GTSAC 3 cut(s) 205, 2657, 2994
NspI RCATGY 5 cut(s) 526, 649, 2973, 3052, 3107
PciI ACATGT 3 cut(s) 522, 2969, 3103
PcsI WCGNNNNNNNCGW 2 cut(s) 798, 1801
PctI GAATGC 4 cut(s) 178, 794, 1019, 2747
PdmI GAANNNNTTC 4 cut(s) 8, 1307, 2205, 2911
PfeI GAWTC 8 cut(s) 753, 1303, 1694, 1703, 1801, 1996, 2122, 2755
PflMI CCANNNNNTGG 2 cut(s) 911, 1188
PfoI TCCNGGA 2 cut(s) 748, 2920
PkrI GCNGC 5 cut(s) 215, 251, 2276, 2708, 2821
Ple19I CGATCG 1 cut(s) 369
PleI GAGTC 5 cut(s) 688, 795, 1939, 2673, 2683
PpsI GAGTC 5 cut(s) 688, 795, 1939, 2673, 2683
PscI ACATGT 3 cut(s) 522, 2969, 3103
PshAI GACNNNNGTC 1 cut(s) 2664
PshBI ATTAAT 2 cut(s) 408, 1176
Psp124BI GAGCTC 1 cut(s) 1662
Psp6I CCWGG 6 cut(s) 748, 808, 927, 1737, 2359, 2920
PspFI CCCAGC 1 cut(s) 1252
PspGI CCWGG 6 cut(s) 748, 808, 927, 1737, 2359, 2920
PspN4I GGNNCC 4 cut(s) 602, 1123, 1228, 2853
PspPI GGNCC 7 cut(s) 1028, 1122, 1316, 1600, 1741, 2683, 2852
PstNI CAGNNNCTG 1 cut(s) 928
PsuI RGATCY 8 cut(s) 258, 745, 828, 914, 931, 1226, 1375, 2326
PvuI CGATCG 1 cut(s) 369
RsaI GTAC 9 cut(s) 181, 926, 1002, 1171, 1858, 2034, 2313, 2358, 3114
RsaNI GTAC 9 cut(s) 180, 925, 1001, 1170, 1857, 2033, 2312, 2357, 3113
RseI CAYNNNNRTG 3 cut(s) 1620, 2209, 3108
Rsr2I CGGWCCG 1 cut(s) 1028
RsrII CGGWCCG 1 cut(s) 1028
SacI GAGCTC 1 cut(s) 1662
SatI GCNGC 5 cut(s) 214, 250, 2275, 2707, 2820
Sau96I GGNCC 7 cut(s) 1028, 1122, 1316, 1600, 1741, 2683, 2852
ScaI AGTACT 3 cut(s) 181, 2034, 2313
SchI GAGTC 5 cut(s) 689, 796, 1940, 2674, 2684
ScrFI CCNGG 7 cut(s) 750, 810, 929, 1739, 2361, 2922, 2992
SduI GDGCHC 2 cut(s) 1662, 2800
SfaNI GCATC 4 cut(s) 1265, 2013, 2806, 2991
SinI GGWCC 5 cut(s) 1028, 1316, 1600, 1741, 2683
SmiMI CAYNNNNRTG 3 cut(s) 1620, 2209, 3108
SmlI CTYRAG 7 cut(s) 244, 385, 448, 640, 664, 784, 2662
SmoI CTYRAG 7 cut(s) 244, 385, 448, 640, 664, 784, 2662
SpeI ACTAGT 1 cut(s) 1724
SsiI CCGC 6 cut(s) 326, 363, 1026, 2275, 2706, 2793
SspI AATATT 1 cut(s) 2515
SspMI CTAG 9 cut(s) 1289, 1373, 1691, 1700, 1725, 1817, 2330, 2672, 3074
SstI GAGCTC 1 cut(s) 1662
StyD4I CCNGG 7 cut(s) 748, 808, 927, 1737, 2359, 2920, 2990
StyI CCWWGG 1 cut(s) 2179
TaaI ACNGT 4 cut(s) 781, 1000, 1041, 2479
TaiI ACGT 1 cut(s) 3136
TaqI TCGA 7 cut(s) 132, 435, 1076, 1239, 1662, 1901, 2417
TaqII GACCGA 2 cut(s) 687, 1045
TatI WGTACW 4 cut(s) 179, 2032, 2311, 3112
TauI GCSGC 2 cut(s) 2277, 2709
TfiI GAWTC 8 cut(s) 753, 1303, 1694, 1703, 1801, 1996, 2122, 2755
TscAI CASTG 8 cut(s) 77, 83, 108, 1123, 2009, 2116, 2353, 2638
TseFI GTSAC 3 cut(s) 205, 2657, 2994
TseI GCWGC 3 cut(s) 213, 249, 2819
Tsp45I GTSAC 3 cut(s) 205, 2657, 2994
TspGWI ACGGA 3 cut(s) 697, 1098, 2577
TspRI CASTG 8 cut(s) 77, 83, 108, 1123, 2009, 2116, 2353, 2638
Van91I CCANNNNNTGG 2 cut(s) 911, 1188
Vha464I CTTAAG 1 cut(s) 244
VpaK11BI GGWCC 5 cut(s) 1028, 1316, 1600, 1741, 2683
VspI ATTAAT 2 cut(s) 408, 1176
XbaI TCTAGA 3 cut(s) 1372, 1699, 1816
XceI RCATGY 5 cut(s) 526, 649, 2973, 3052, 3107
XcmI CCANNNNNNNNNTGG 2 cut(s) 341, 2918
XmnI GAANNNNTTC 4 cut(s) 8, 1307, 2205, 2911
XspI CTAG 9 cut(s) 1289, 1373, 1691, 1700, 1725, 1817, 2330, 2672, 3074
ZrmI AGTACT 3 cut(s) 181, 2034, 2313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.